ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd25o09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK062354.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-G08, full insert sequence Length = 832 Score = 618 bits (312), Expect = e-174 Identities = 413/447 (92%) Strand = Plus / Plus Query: 37 acgctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtc 96 |||||||| || ||||||||||| |||||||||||||||| ||||||||||||||| ||| Sbjct: 164 acgctgacggggaagaccatcactctcgaggtcgagagcagcgacaccatcgacaatgtc 223 Query: 97 aaggccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgct 156 |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| || Sbjct: 224 aaggccaagatccaggacaaagagggtattcccccagaccagcaaaggctgattttcgca 283 Query: 157 ggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacg 216 || ||||| |||||||||| || |||||||||||||||||||||||||||||||| ||| Sbjct: 284 gggaagcaactggaagatggacgtacattagctgattacaacattcagaaagagtcaacg 343 Query: 217 ctccatttggtcctgaggctcaggggtggaactatgatcaaggtgaagacacttactggg 276 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 344 ctccatttggtcctgaggctcaggggtggaaccatgatcaaggtgaagacactcactggg 403 Query: 277 aaggaaattgagattgatattgagcccactgacacaatcgatagaatcaaggaacgtgtt 336 |||||||| ||||| || |||||||||||||| || || |||||||||||||| |||||| Sbjct: 404 aaggaaatcgagatcgacattgagcccactgataccattgatagaatcaaggagcgtgtt 463 Query: 337 gaggagaaagagggtattccacctgttcaacagaggctcatctatgctgggaagcaactc 396 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 464 gaggagaaagagggtattccacctgttcagcagaggctcatttatgctgggaagcaactt 523 Query: 397 gctgatgacaaaactgcaaaggactacaacatcgaaggtggttcagtgctccatcttgtg 456 |||||||| |||||||| ||||| |||||||| |||||||| |||||||||||||| ||| Sbjct: 524 gctgatgataaaactgccaaggattacaacattgaaggtggctcagtgctccatctcgtg 583 Query: 457 cttgctctgaggggtggtcagtagatg 483 ||||||||||||||||||||||||||| Sbjct: 584 cttgctctgaggggtggtcagtagatg 610
>gb|AY090541.1| Deschampsia antarctica clone Dacor 1.0 polyubiquitin 2 mRNA, complete cds Length = 831 Score = 357 bits (180), Expect = 3e-95 Identities = 371/435 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||||||| |||||||||||| ||||||||| Sbjct: 142 ctgacggggaagaccatcaccctcgaggtggagagcagcgacaccatcgataacgtcaag 201 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||| ||||||||||| || || ||||| |||||||| ||| | | || |||||||| Sbjct: 202 gccaaaatccaggacaaagaagggattcctccagaccaacaacgtttgatatttgctggc 261 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 ||||||||||||||||| || ||| | ||||||||||| ||||| || ||||| || || Sbjct: 262 aagcagttggaagatggacgcacacttgctgattacaatattcaaaaggagtctactctt 321 Query: 220 catttggtcctgaggctcaggggtggaactatgatcaaggtgaagacacttactgggaag 279 || |||||||| ||||||||||| || |||||||||||||| |||||||| ||||| ||| Sbjct: 322 cacttggtcctcaggctcaggggcggtactatgatcaaggttaagacactcactggaaag 381 Query: 280 gaaattgagattgatattgagcccactgacacaatcgatagaatcaaggaacgtgttgag 339 || || || ||||| ||||||||||||||||| || ||||| ||||||| ||||||||| Sbjct: 382 gagatcgaaattgacattgagcccactgacacgattgatagggtcaaggagcgtgttgag 441 Query: 340 gagaaagagggtattccacctgttcaacagaggctcatctatgctgggaagcaactcgct 399 |||||||| || ||||| || || || || ||| | || |||||||| ||||| || || Sbjct: 442 gagaaagaaggcattcctcccgtgcagcaaaggttgatttatgctggtaagcagcttgca 501 Query: 400 gatgacaaaactgcaaaggactacaacatcgaaggtggttcagtgctccatcttgtgctt 459 |||||||| ||||| ||||||||||||||||||||||| || || ||||||||||| ||| Sbjct: 502 gatgacaagactgcgaaggactacaacatcgaaggtggctccgtcctccatcttgtactt 561 Query: 460 gctctgaggggtggt 474 ||||||||||||||| Sbjct: 562 gctctgaggggtggt 576
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 357 bits (180), Expect = 3e-95 Identities = 243/264 (92%) Strand = Plus / Plus Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||| ||||| ||||||||||||||||||||||| ||||| || || ||||| || Sbjct: 26203785 caggacaaagagggtattcccccagaccagcaaaggctgattttcgcagggaagcaactg 26203844 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggtc 228 |||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 26203845 gaagatggacgtacattagctgattacaacattcagaaagagtcaacgctccatttggtc 26203904 Query: 229 ctgaggctcaggggtggaactatgatcaaggtgaagacacttactgggaaggaaattgag 288 |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||| Sbjct: 26203905 ctgaggctcaggggtggaaccatgatcaaggtgaagacactcactgggaaggaaatcgag 26203964 Query: 289 attgatattgagcccactgacacaatcgatagaatcaaggaacgtgttgaggagaaagag 348 || || |||||||||||||| || || |||||||||||||| |||||||||||||||||| Sbjct: 26203965 atcgacattgagcccactgataccattgatagaatcaaggagcgtgttgaggagaaagag 26204024 Query: 349 ggtattccacctgttcaacagagg 372 ||||||||||||||||| |||||| Sbjct: 26204025 ggtattccacctgttcagcagagg 26204048 Score = 163 bits (82), Expect = 9e-37 Identities = 106/114 (92%) Strand = Plus / Plus Query: 370 aggctcatctatgctgggaagcaactcgctgatgacaaaactgcaaaggactacaacatc 429 |||||||| ||||||||||||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 26204143 aggctcatttatgctgggaagcaacttgctgatgataaaactgccaaggattacaacatt 26204202 Query: 430 gaaggtggttcagtgctccatcttgtgcttgctctgaggggtggtcagtagatg 483 |||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 26204203 gaaggtggctcagtgctccatctcgtgcttgctctgaggggtggtcagtagatg 26204256 Score = 133 bits (67), Expect = 8e-28 Identities = 171/206 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||||||||||||||||||||| ||||||||| | ||||| ||||||||||| ||| Sbjct: 28020093 ctgaccggcaagaccatcacgcttgaggtcgagtcctcggacacgatcgacaacgtgaag 28020152 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||| || ||||| |||||||| | || || || || || Sbjct: 28020153 gccaagatccaggacaaggagggtatccccccggaccagcagcgcctcatcttcgccggc 28020212 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||| ||||| || || || ||||| |||||||| ||||| ||||| || || Sbjct: 28020213 aagcagctggaggatggccgcaccttggctgactacaacatccagaaggagtccaccctt 28020272 Query: 220 catttggtcctgaggctcaggggtgg 245 || |||| || |||||||||||||| Sbjct: 28020273 cacctggttctcaggctcaggggtgg 28020298 Score = 123 bits (62), Expect = 8e-25 Identities = 91/101 (90%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||||||| | ||||| ||||||||||| ||| Sbjct: 28019637 ctgaccggcaagaccatcaccctcgaggtcgagtcctcggacacgatcgacaacgtgaag 28019696 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagca 140 |||||||||||||||||||||||||| ||||| |||||||| Sbjct: 28019697 gccaagatccaggacaaggagggcatccccccggaccagca 28019737 Score = 113 bits (57), Expect = 7e-22 Identities = 164/200 (82%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||||||||| |||||||| ||| | |||||||| ||||| ||||||||| Sbjct: 28018956 accggcaagaccatcaccctcgaggttgagtcctcggacaccattgacaatgtcaaggcc 28019015 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||||||||||||||| ||||| |||||||| | || || |||||||| ||| Sbjct: 28019016 aagatccaggacaaggagggcatccccccggaccagcagcgtctcatctttgctggcaag 28019075 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || | || || |||||||| ||||| ||||| || ||||| Sbjct: 28019076 cagcttgaggatggccgcaccctggccgactacaacatccagaaggagtccaccctccac 28019135 Query: 223 ttggtcctgaggctcagggg 242 | || || ||||||||||| Sbjct: 28019136 cttgtgctcaggctcagggg 28019155 Score = 113 bits (57), Expect = 7e-22 Identities = 71/76 (93%) Strand = Plus / Plus Query: 37 acgctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtc 96 |||||||| || ||||||||||| |||||||||||||||| ||||||||||||||| ||| Sbjct: 26202071 acgctgacggggaagaccatcactctcgaggtcgagagcagcgacaccatcgacaatgtc 26202130 Query: 97 aaggccaagatccagg 112 |||||||||||||||| Sbjct: 26202131 aaggccaagatccagg 26202146 Score = 109 bits (55), Expect = 1e-20 Identities = 165/202 (81%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||| |||||||||||||| || ||||||||| |||||||| ||||| ||||||| Sbjct: 28019410 tgactggcaagaccatcacccttgaggtcgagtcgtctgacaccattgacaatgtcaagg 28019469 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||||||||| |||||||||||||| | || || || || || | Sbjct: 28019470 ccaagatccaggacaaggagggcatccccccagaccagcagcgtctcatcttcgccggca 28019529 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| |||| ||||| || || | ||||| |||||||| ||||| ||||| || |||| Sbjct: 28019530 agcagctggaggatggccgcacccttgctgactacaacatccagaaggagtccaccctcc 28019589 Query: 221 atttggtcctgaggctcagggg 242 | | || || ||||||||||| Sbjct: 28019590 accttgtgctcaggctcagggg 28019611 Score = 101 bits (51), Expect = 3e-18 Identities = 167/206 (81%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||||||| | ||||| |||||||| || ||| Sbjct: 28019865 ctgactggcaagaccatcacacttgaggtcgagtcctcggacacgatcgacaatgtgaag 28019924 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||| ||||| |||||||| | || || || ||||| Sbjct: 28019925 gccaagatccaggacaaggagggcatccccccggaccagcagcgtctcatcttcgctggc 28019984 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||| || || || || | || || |||||||| ||||| ||||| || ||| Sbjct: 28019985 aagcagctggaggacggccgcacccttgccgactacaacatccagaaggagtccaccctc 28020044 Query: 220 catttggtcctgaggctcaggggtgg 245 || | || || |||||||||||||| Sbjct: 28020045 caccttgtgctcaggctcaggggtgg 28020070 Score = 97.6 bits (49), Expect = 4e-17 Identities = 87/100 (87%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||| |||||||||||||| || ||||||||| |||||||| ||||| ||||||| Sbjct: 28019182 tgactggcaagaccatcacccttgaggtcgagtcgtctgacaccattgacaatgtcaagg 28019241 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagca 140 ||||||||||||||||||||||||| ||||| |||||||| Sbjct: 28019242 ccaagatccaggacaaggagggcatccccccggaccagca 28019281 Score = 87.7 bits (44), Expect = 4e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 78 cgacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagacca 137 |||||| || |||||||| ||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 28020359 cgacactattgacaacgtgaaggcgaagatccaggacaaggagggcatccccccggacca 28020418 Query: 138 gcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaa 197 ||| | || || |||||||| |||||| | || ||||| || || | || |||||||| Sbjct: 28020419 gcagcgtctgatctttgctggtaagcagcttgaggatggccgcacccttgcggattacaa 28020478 Query: 198 cattcagaaagagtcgacgctcca 221 ||| ||||| ||||| || ||||| Sbjct: 28020479 catccagaaggagtccacactcca 28020502 Score = 81.8 bits (41), Expect = 3e-12 Identities = 142/176 (80%) Strand = Plus / Minus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| |||||||| ||| | || || || ||||| || ||||||||| Sbjct: 27575647 ggcaagaccatcaccctcgaggttgagtcctctgatacaattgacaatgtgaaggccaag 27575588 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 || |||||||||||||||||||| || ||||||||| | || || |||||||| ||||| Sbjct: 27575587 attcaggacaaggagggcattccacctgaccagcaacgtctcatctttgctggcaagcaa 27575528 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 | || ||||| || || | || ||||||||||| ||||| ||||| || ||||| Sbjct: 27575527 ctagaggatggccgcaccctcgcggattacaacatccagaaggagtccaccctcca 27575472 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 85 atcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccagcaaagg 144 |||||||| || ||||| ||||| |||||||||||||| |||||||| |||||||| | Sbjct: 27575380 atcgacaatgtgaaggcgaagattcaggacaaggagggaattcccccggaccagcagcgc 27575321 Query: 145 ctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcag 204 || || ||||| | |||||| | || ||||| || ||| | |||||||||||||||||| Sbjct: 27575320 ctcatctttgcagacaagcagctcgaggatggacgtacactggctgattacaacattcag 27575261 Query: 205 aaagagtc 212 || ||||| Sbjct: 27575260 aaggagtc 27575253
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 357 bits (180), Expect = 3e-95 Identities = 243/264 (92%) Strand = Plus / Plus Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||| ||||| ||||||||||||||||||||||| ||||| || || ||||| || Sbjct: 68325 caggacaaagagggtattcccccagaccagcaaaggctgattttcgcagggaagcaactg 68384 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggtc 228 |||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 68385 gaagatggacgtacattagctgattacaacattcagaaagagtcaacgctccatttggtc 68444 Query: 229 ctgaggctcaggggtggaactatgatcaaggtgaagacacttactgggaaggaaattgag 288 |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||| Sbjct: 68445 ctgaggctcaggggtggaaccatgatcaaggtgaagacactcactgggaaggaaatcgag 68504 Query: 289 attgatattgagcccactgacacaatcgatagaatcaaggaacgtgttgaggagaaagag 348 || || |||||||||||||| || || |||||||||||||| |||||||||||||||||| Sbjct: 68505 atcgacattgagcccactgataccattgatagaatcaaggagcgtgttgaggagaaagag 68564 Query: 349 ggtattccacctgttcaacagagg 372 ||||||||||||||||| |||||| Sbjct: 68565 ggtattccacctgttcagcagagg 68588 Score = 163 bits (82), Expect = 9e-37 Identities = 106/114 (92%) Strand = Plus / Plus Query: 370 aggctcatctatgctgggaagcaactcgctgatgacaaaactgcaaaggactacaacatc 429 |||||||| ||||||||||||||||| |||||||| |||||||| ||||| |||||||| Sbjct: 68683 aggctcatttatgctgggaagcaacttgctgatgataaaactgccaaggattacaacatt 68742 Query: 430 gaaggtggttcagtgctccatcttgtgcttgctctgaggggtggtcagtagatg 483 |||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 68743 gaaggtggctcagtgctccatctcgtgcttgctctgaggggtggtcagtagatg 68796 Score = 113 bits (57), Expect = 7e-22 Identities = 71/76 (93%) Strand = Plus / Plus Query: 37 acgctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtc 96 |||||||| || ||||||||||| |||||||||||||||| ||||||||||||||| ||| Sbjct: 66611 acgctgacggggaagaccatcactctcgaggtcgagagcagcgacaccatcgacaatgtc 66670 Query: 97 aaggccaagatccagg 112 |||||||||||||||| Sbjct: 66671 aaggccaagatccagg 66686
>dbj|AK099513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029K20, full insert sequence Length = 795 Score = 341 bits (172), Expect = 2e-90 Identities = 369/435 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 175 ctgacggggaagaccatcaccctcgaggtggagagcagcgacaccatcgacaacgtcaag 234 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||| |||||||||||||| || || || ||||| || || | | || || || || Sbjct: 235 gccaaaatccaggacaaggaagggatccctccagatcaacagcgtttgatattcgccggc 294 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| ||||||||||||| ||| | || || |||||||||||||| ||||| || || Sbjct: 295 aagcagctggaagatgggcgcacactggccgactacaacattcagaaggagtcaactctt 354 Query: 220 catttggtcctgaggctcaggggtggaactatgatcaaggtgaagacacttactgggaag 279 || |||||||| |||||||||||||| |||||||||||||| ||||| || ||||| || Sbjct: 355 cacttggtcctcaggctcaggggtggcactatgatcaaggttaagaccctcactggaaaa 414 Query: 280 gaaattgagattgatattgagcccactgacacaatcgatagaatcaaggaacgtgttgag 339 || ||||| ||||| ||||||||||| ||||| |||||||| |||||||| ||||||||| Sbjct: 415 gagattgaaattgacattgagcccaccgacacgatcgataggatcaaggagcgtgttgag 474 Query: 340 gagaaagagggtattccacctgttcaacagaggctcatctatgctgggaagcaactcgct 399 |||||||| || ||||| || || || || ||||| ||||||||||| ||||| || || Sbjct: 475 gagaaagaaggcattcctcccgtgcagcaaaggcttatctatgctggtaagcagcttgcc 534 Query: 400 gatgacaaaactgcaaaggactacaacatcgaaggtggttcagtgctccatcttgtgctt 459 || ||||| ||||| |||||||| |||||||||||||| || || ||||||||||| ||| Sbjct: 535 gacgacaagactgcgaaggactataacatcgaaggtggctctgtcctccatcttgtcctt 594 Query: 460 gctctgaggggtggt 474 ||||||||||||||| Sbjct: 595 gctctgaggggtggt 609
>gb|AY104764.1| Zea mays PCO108118 mRNA sequence Length = 878 Score = 317 bits (160), Expect = 3e-83 Identities = 366/435 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||||||| ||||||| |||||||||||||| Sbjct: 205 ctgacggggaagaccatcaccctcgaggtggagagcagcgacaccgtcgacaacgtcaag 264 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||| |||||||||||||| || ||||||||||| || || | || || || ||||| Sbjct: 265 gccaaaatccaggacaaggaagggattcccccagatcaacagcgactgatattcgctggc 324 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||| ||||| || || | ||||| |||||||| || || ||||| || || Sbjct: 325 aagcagctggaggatggacgcacgctggctgactacaacatccaaaaggagtcaactctt 384 Query: 220 catttggtcctgaggctcaggggtggaactatgatcaaggtgaagacacttactgggaag 279 ||||||||||| ||||| ||||||||||| ||||||||||| || || || |||||||| Sbjct: 385 catttggtcctcaggcttaggggtggaaccatgatcaaggtcaaaactctcactgggaaa 444 Query: 280 gaaattgagattgatattgagcccactgacacaatcgatagaatcaaggaacgtgttgag 339 || || ||||| || ||||| ||||||||| | || || || |||||||| |||||||| Sbjct: 445 gagatcgagatcgacattgaacccactgactcgattgacaggatcaaggagcgtgttgaa 504 Query: 340 gagaaagagggtattccacctgttcaacagaggctcatctatgctgggaagcaactcgct 399 |||||||| || ||||| || || || || ||||||||||||||||| ||||| || ||| Sbjct: 505 gagaaagaaggcattcctcccgtgcagcaaaggctcatctatgctggtaagcagcttgct 564 Query: 400 gatgacaaaactgcaaaggactacaacatcgaaggtggttcagtgctccatcttgtgctt 459 |||||||| || |||||||||||||||||||| ||||| || || ||||||||||| ||| Sbjct: 565 gatgacaagaccgcaaaggactacaacatcgagggtggatctgtcctccatcttgtcctt 624 Query: 460 gctctgaggggtggt 474 ||||||||||||||| Sbjct: 625 gctctgaggggtggt 639
>ref|NM_102873.3| Arabidopsis thaliana RUB1 (RELATED TO UBIQUITIN 1) AT1G31340 (RUB1) mRNA, complete cds Length = 702 Score = 280 bits (141), Expect = 6e-72 Identities = 359/432 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| || ||||| || || |||||||| |||| ||||||||||||||| ||||| ||| Sbjct: 64 accggaaaaaccataaccctagaggtcgaaagcagcgacaccatcgacaatgtcaaagcc 123 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 || || |||||||| ||||| || || || || || || ||| | || |||||||| ||| Sbjct: 124 aaaattcaggacaaagagggaataccacctgatcaacagaggttgatatttgctggtaag 183 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | |||||||| |||||||||| |||||||||||||||||||| ||||| || || Sbjct: 184 cagcttgaagatggtagaacattagcggattacaacattcagaaagaatcgactcttcac 243 Query: 223 ttggtcctgaggctcaggggtggaactatgatcaaggtgaagacacttactgggaaggaa 282 ||||| ||||||| |||||||| |||||||| ||||||||||| || || ||||||||| Sbjct: 244 ttggtattgaggcttaggggtgggactatgattaaggtgaagactctcacagggaaggaa 303 Query: 283 attgagattgatattgagcccactgacacaatcgatagaatcaaggaacgtgttgaggag 342 |||||||||||||| || || || || || || ||| | || |||||||||||||||||| Sbjct: 304 attgagattgatatcgaaccaaccgatactattgatcggattaaggaacgtgttgaggag 363 Query: 343 aaagagggtattccacctgttcaacagaggctcatctatgctgggaagcaactcgctgat 402 ||||| ||||| || ||||||||||| ||||| ||||| || || || || || |||||| Sbjct: 364 aaagaaggtatccctcctgttcaacaaaggctaatctacgccggaaaacagctagctgat 423 Query: 403 gacaaaactgcaaaggactacaacatcgaaggtggttcagtgctccatcttgtgcttgct 462 |||||||| ||||||||||||||||| || || || || || || ||||| || ||||| Sbjct: 424 gacaaaacggcaaaggactacaacatagagggaggctctgttcttcatctggttcttgcc 483 Query: 463 ctgaggggtggt 474 || ||||||||| Sbjct: 484 cttaggggtggt 495
>gb|BT006110.1| Arabidopsis thaliana clone U50103 putative ubiquitin (AtRUB1) (At1g31340) mRNA, complete cds Length = 502 Score = 280 bits (141), Expect = 6e-72 Identities = 359/432 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| || ||||| || || |||||||| |||| ||||||||||||||| ||||| ||| Sbjct: 25 accggaaaaaccataaccctagaggtcgaaagcagcgacaccatcgacaatgtcaaagcc 84 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 || || |||||||| ||||| || || || || || || ||| | || |||||||| ||| Sbjct: 85 aaaattcaggacaaagagggaataccacctgatcaacagaggttgatatttgctggtaag 144 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | |||||||| |||||||||| |||||||||||||||||||| ||||| || || Sbjct: 145 cagcttgaagatggtagaacattagcggattacaacattcagaaagaatcgactcttcac 204 Query: 223 ttggtcctgaggctcaggggtggaactatgatcaaggtgaagacacttactgggaaggaa 282 ||||| ||||||| |||||||| |||||||| ||||||||||| || || ||||||||| Sbjct: 205 ttggtattgaggcttaggggtgggactatgattaaggtgaagactctcacagggaaggaa 264 Query: 283 attgagattgatattgagcccactgacacaatcgatagaatcaaggaacgtgttgaggag 342 |||||||||||||| || || || || || || ||| | || |||||||||||||||||| Sbjct: 265 attgagattgatatcgaaccaaccgatactattgatcggattaaggaacgtgttgaggag 324 Query: 343 aaagagggtattccacctgttcaacagaggctcatctatgctgggaagcaactcgctgat 402 ||||| ||||| || ||||||||||| ||||| ||||| || || || || || |||||| Sbjct: 325 aaagaaggtatccctcctgttcaacaaaggctaatctacgccggaaaacagctagctgat 384 Query: 403 gacaaaactgcaaaggactacaacatcgaaggtggttcagtgctccatcttgtgcttgct 462 |||||||| ||||||||||||||||| || || || || || || ||||| || ||||| Sbjct: 385 gacaaaacggcaaaggactacaacatagagggaggctctgttcttcatctggttcttgcc 444 Query: 463 ctgaggggtggt 474 || ||||||||| Sbjct: 445 cttaggggtggt 456
>gb|BT005749.1| Arabidopsis thaliana clone RAFL15-38-H20 (R50103) putative ubiquitin (AtRUB1) (At1g31340) mRNA, complete cds Length = 742 Score = 280 bits (141), Expect = 6e-72 Identities = 359/432 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| || ||||| || || |||||||| |||| ||||||||||||||| ||||| ||| Sbjct: 64 accggaaaaaccataaccctagaggtcgaaagcagcgacaccatcgacaatgtcaaagcc 123 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 || || |||||||| ||||| || || || || || || ||| | || |||||||| ||| Sbjct: 124 aaaattcaggacaaagagggaataccacctgatcaacagaggttgatatttgctggtaag 183 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | |||||||| |||||||||| |||||||||||||||||||| ||||| || || Sbjct: 184 cagcttgaagatggtagaacattagcggattacaacattcagaaagaatcgactcttcac 243 Query: 223 ttggtcctgaggctcaggggtggaactatgatcaaggtgaagacacttactgggaaggaa 282 ||||| ||||||| |||||||| |||||||| ||||||||||| || || ||||||||| Sbjct: 244 ttggtattgaggcttaggggtgggactatgattaaggtgaagactctcacagggaaggaa 303 Query: 283 attgagattgatattgagcccactgacacaatcgatagaatcaaggaacgtgttgaggag 342 |||||||||||||| || || || || || || ||| | || |||||||||||||||||| Sbjct: 304 attgagattgatatcgaaccaaccgatactattgatcggattaaggaacgtgttgaggag 363 Query: 343 aaagagggtattccacctgttcaacagaggctcatctatgctgggaagcaactcgctgat 402 ||||| ||||| || ||||||||||| ||||| ||||| || || || || || |||||| Sbjct: 364 aaagaaggtatccctcctgttcaacaaaggctaatctacgccggaaaacagctagctgat 423 Query: 403 gacaaaactgcaaaggactacaacatcgaaggtggttcagtgctccatcttgtgcttgct 462 |||||||| ||||||||||||||||| || || || || || || ||||| || ||||| Sbjct: 424 gacaaaacggcaaaggactacaacatagagggaggctctgttcttcatctggttcttgcc 483 Query: 463 ctgaggggtggt 474 || ||||||||| Sbjct: 484 cttaggggtggt 495
>ref|NM_129118.3| Arabidopsis thaliana UBQ7 AT2G35635 (UBQ7) mRNA, complete cds Length = 688 Score = 266 bits (134), Expect = 8e-68 Identities = 289/341 (84%) Strand = Plus / Plus Query: 70 gagagcancgacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattccc 129 ||||||| ||||||||||||||| || || ||||| ||||||||||| |||||||| || Sbjct: 102 gagagcagcgacaccatcgacaatgttaaagccaaaatccaggacaaagagggcatacca 161 Query: 130 ccagaccagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagct 189 || || || || ||||| ||||||||||| ||||| ||||||||||| || || |||||| Sbjct: 162 cctgatcaacagaggctgatttttgctggtaagcaattggaagatggccggaccttagct 221 Query: 190 gattacaacattcagaaagagtcgacgctccatttggtcctgaggctcaggggtggaact 249 ||||||||||| ||||||||||| || || ||| | ||||| |||||||| |||||||| Sbjct: 222 gattacaacatccagaaagagtctactcttcatcttgtcctcaggctcagaggtggaacc 281 Query: 250 atgatcaaggtgaagacacttactgggaaggaaattgagattgatattgagcccactgac 309 |||||||||||||||||||| ||||| || ||||| ||||||||||| || || || ||| Sbjct: 282 atgatcaaggtgaagacactcactggaaaagaaatcgagattgatatcgaaccaaccgac 341 Query: 310 acaatcgatagaatcaaggaacgtgttgaggagaaagagggtattccacctgttcaacag 369 || || ||| | ||||| ||||||||||| |||||||| || || || ||||||||||| Sbjct: 342 actattgatcggatcaaagaacgtgttgaagagaaagaaggcatccctcctgttcaacaa 401 Query: 370 aggctcatctatgctgggaagcaactcgctgatgacaaaac 410 |||||||| ||||| || || || || |||||||||||||| Sbjct: 402 aggctcatatatgccggaaaacagcttgctgatgacaaaac 442
>gb|AY093802.1| Arabidopsis thaliana At1g31340/T19E23_4 mRNA, complete cds Length = 465 Score = 266 bits (134), Expect = 8e-68 Identities = 289/341 (84%) Strand = Plus / Plus Query: 70 gagagcancgacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattccc 129 ||||||| ||||||||||||||| || || ||||| ||||||||||| |||||||| || Sbjct: 52 gagagcagcgacaccatcgacaatgttaaagccaaaatccaggacaaagagggcatacca 111 Query: 130 ccagaccagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagct 189 || || || || ||||| ||||||||||| ||||| ||||||||||| || || |||||| Sbjct: 112 cctgatcaacagaggctgatttttgctggtaagcaattggaagatggccggaccttagct 171 Query: 190 gattacaacattcagaaagagtcgacgctccatttggtcctgaggctcaggggtggaact 249 ||||||||||| ||||||||||| || || ||| | ||||| |||||||| |||||||| Sbjct: 172 gattacaacatccagaaagagtctactcttcatcttgtcctcaggctcagaggtggaacc 231 Query: 250 atgatcaaggtgaagacacttactgggaaggaaattgagattgatattgagcccactgac 309 |||||||||||||||||||| ||||| || ||||| ||||||||||| || || || ||| Sbjct: 232 atgatcaaggtgaagacactcactggaaaagaaatcgagattgatatcgaaccaaccgac 291 Query: 310 acaatcgatagaatcaaggaacgtgttgaggagaaagagggtattccacctgttcaacag 369 || || ||| | ||||| ||||||||||| |||||||| || || || ||||||||||| Sbjct: 292 actattgatcggatcaaagaacgtgttgaagagaaagaaggcatccctcctgttcaacaa 351 Query: 370 aggctcatctatgctgggaagcaactcgctgatgacaaaac 410 |||||||| ||||| || || || || |||||||||||||| Sbjct: 352 aggctcatatatgccggaaaacagcttgctgatgacaaaac 392
>gb|AY074850.1| Arabidopsis thaliana At1g31340/T19E23_4 mRNA, complete cds Length = 641 Score = 266 bits (134), Expect = 8e-68 Identities = 289/341 (84%) Strand = Plus / Plus Query: 70 gagagcancgacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattccc 129 ||||||| ||||||||||||||| || || ||||| ||||||||||| |||||||| || Sbjct: 102 gagagcagcgacaccatcgacaatgttaaagccaaaatccaggacaaagagggcatacca 161 Query: 130 ccagaccagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagct 189 || || || || ||||| ||||||||||| ||||| ||||||||||| || || |||||| Sbjct: 162 cctgatcaacagaggctgatttttgctggtaagcaattggaagatggccggaccttagct 221 Query: 190 gattacaacattcagaaagagtcgacgctccatttggtcctgaggctcaggggtggaact 249 ||||||||||| ||||||||||| || || ||| | ||||| |||||||| |||||||| Sbjct: 222 gattacaacatccagaaagagtctactcttcatcttgtcctcaggctcagaggtggaacc 281 Query: 250 atgatcaaggtgaagacacttactgggaaggaaattgagattgatattgagcccactgac 309 |||||||||||||||||||| ||||| || ||||| ||||||||||| || || || ||| Sbjct: 282 atgatcaaggtgaagacactcactggaaaagaaatcgagattgatatcgaaccaaccgac 341 Query: 310 acaatcgatagaatcaaggaacgtgttgaggagaaagagggtattccacctgttcaacag 369 || || ||| | ||||| ||||||||||| |||||||| || || || ||||||||||| Sbjct: 342 actattgatcggatcaaagaacgtgttgaagagaaagaaggcatccctcctgttcaacaa 401 Query: 370 aggctcatctatgctgggaagcaactcgctgatgacaaaac 410 |||||||| ||||| || || || || |||||||||||||| Sbjct: 402 aggctcatatatgccggaaaacagcttgctgatgacaaaac 442
>dbj|AK118678.1| Arabidopsis thaliana mRNA for ubiquitin-like protein, complete cds, clone: RAFL19-95-A01 Length = 660 Score = 266 bits (134), Expect = 8e-68 Identities = 289/341 (84%) Strand = Plus / Plus Query: 70 gagagcancgacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattccc 129 ||||||| ||||||||||||||| || || ||||| ||||||||||| |||||||| || Sbjct: 102 gagagcagcgacaccatcgacaatgttaaagccaaaatccaggacaaagagggcatacca 161 Query: 130 ccagaccagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagct 189 || || || || ||||| ||||||||||| ||||| ||||||||||| || || |||||| Sbjct: 162 cctgatcaacagaggctgatttttgctggtaagcaattggaagatggccggaccttagct 221 Query: 190 gattacaacattcagaaagagtcgacgctccatttggtcctgaggctcaggggtggaact 249 ||||||||||| ||||||||||| || || ||| | ||||| |||||||| |||||||| Sbjct: 222 gattacaacatccagaaagagtctactcttcatcttgtcctcaggctcagaggtggaacc 281 Query: 250 atgatcaaggtgaagacacttactgggaaggaaattgagattgatattgagcccactgac 309 |||||||||||||||||||| ||||| || ||||| ||||||||||| || || || ||| Sbjct: 282 atgatcaaggtgaagacactcactggaaaagaaatcgagattgatatcgaaccaaccgac 341 Query: 310 acaatcgatagaatcaaggaacgtgttgaggagaaagagggtattccacctgttcaacag 369 || || ||| | ||||| ||||||||||| |||||||| || || || ||||||||||| Sbjct: 342 actattgatcggatcaaagaacgtgttgaagagaaagaaggcatccctcctgttcaacaa 401 Query: 370 aggctcatctatgctgggaagcaactcgctgatgacaaaac 410 |||||||| ||||| || || || || |||||||||||||| Sbjct: 402 aggctcatatatgccggaaaacagcttgctgatgacaaaac 442
>gb|AF240445.1|AF240445 Populus tremula x Populus tremuloides polyubiquitin (Ubi) mRNA, complete cds Length = 750 Score = 244 bits (123), Expect = 3e-61 Identities = 356/434 (82%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||| ||||||||||| || |||||||||||||| | |||| |||||||||||||||| | Sbjct: 114 tgactggcaagaccataactctcgaggtcgagagtagcgacgccatcgacaacgtcaaag 173 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||| || |||||||| ||||| || || || |||||||| | ||||||||||| | Sbjct: 174 ccaagattcaagacaaggaaggcatccctcctgatcagcaaagattgatttttgctggta 233 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | || || |||||||| || || | |||||||||||||| ||||| ||||| || || | Sbjct: 234 aacaattagaagatggacgtactcttgctgattacaacatccagaaggagtccactcttc 293 Query: 221 atttggtcctgaggctcaggggtggaactatgatcaaggtgaagacacttactgggaagg 280 | |||| ||||||| ||||| ||||||||||||||||||||||| || ||||| || | Sbjct: 294 acctggttttgaggcttaggggaggaactatgatcaaggtgaagactctcactggaaaag 353 Query: 281 aaattgagattgatattgagcccactgacacaatcgatagaatcaaggaacgtgttgagg 340 ||||||| ||||| ||||| || | ||| || || ||||| ||||||||||| ||||||| Sbjct: 354 aaattgaaattgacattgaaccaaatgataccattgataggatcaaggaacgggttgagg 413 Query: 341 agaaagagggtattccacctgttcaacagaggctcatctatgctgggaagcaactcgctg 400 ||||||| || ||||| || || || || ||||| || |||||||| ||||| || | | Sbjct: 414 agaaagaaggaattcctccagtgcagcaaaggcttatttatgctggcaagcagcttggag 473 Query: 401 atgacaaaactgcaaaggactacaacatcgaaggtggttcagtgctccatcttgtgcttg 460 ||||||| || || |||||||| || || ||||| || ||||| |||||||| |||| Sbjct: 474 atgacaagacagctcgcgactacaatattgagggtggctctgtgcttcatcttgttcttg 533 Query: 461 ctctgaggggtggt 474 |||||||||||||| Sbjct: 534 ctctgaggggtggt 547
>gb|AC006068.4| Arabidopsis thaliana chromosome 2 clone T20F21 map ve016, complete sequence Length = 107436 Score = 198 bits (100), Expect = 2e-47 Identities = 220/260 (84%) Strand = Plus / Minus Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||| |||||||| || || || || || ||||| ||||||||||| ||||| ||| Sbjct: 62748 caggacaaagagggcataccacctgatcaacagaggctgatttttgctggtaagcaattg 62689 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggtc 228 |||||||| || || ||||||||||||||||| ||||||||||| || || ||| | ||| Sbjct: 62688 gaagatggccggaccttagctgattacaacatccagaaagagtctactcttcatcttgtc 62629 Query: 229 ctgaggctcaggggtggaactatgatcaaggtgaagacacttactgggaaggaaattgag 288 || |||||||| |||||||| |||||||||||||||||||| ||||| || ||||| ||| Sbjct: 62628 ctcaggctcagaggtggaaccatgatcaaggtgaagacactcactggaaaagaaatcgag 62569 Query: 289 attgatattgagcccactgacacaatcgatagaatcaaggaacgtgttgaggagaaagag 348 |||||||| || || || ||||| || ||| | ||||| ||||||||||| |||||||| Sbjct: 62568 attgatatcgaaccaaccgacactattgatcggatcaaagaacgtgttgaagagaaagaa 62509 Query: 349 ggtattccacctgttcaaca 368 || || || ||||||||||| Sbjct: 62508 ggcatccctcctgttcaaca 62489 Score = 48.1 bits (24), Expect = 0.036 Identities = 38/43 (88%) Strand = Plus / Minus Query: 70 gagagcancgacaccatcgacaacgtcaaggccaagatccagg 112 ||||||| ||||||||||||||| || || ||||| ||||||| Sbjct: 63042 gagagcagcgacaccatcgacaatgttaaagccaaaatccagg 63000 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Minus Query: 338 aggagaaagagggtattccacctgttcaacagaggctcatctatgctgggaagcaa 393 |||| |||||||| || ||||||| |||||||||||| || | |||||| |||||| Sbjct: 62747 aggacaaagagggcataccacctgatcaacagaggctgatttttgctggtaagcaa 62692
>gb|L05364.1|ATHUBQ7G Arabidopsis thaliana polyubiquitin (ubq7) gene sequence Length = 1585 Score = 198 bits (100), Expect = 2e-47 Identities = 220/260 (84%) Strand = Plus / Plus Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||| |||||||| || || || || || ||||| ||||||||||| ||||| ||| Sbjct: 1014 caggacaaagagggcataccacctgatcaacagaggctgatttttgctggtaagcaattg 1073 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggtc 228 |||||||| || || ||||||||||||||||| ||||||||||| || || ||| | ||| Sbjct: 1074 gaagatggccggaccttagctgattacaacatccagaaagagtctactcttcatcttgtc 1133 Query: 229 ctgaggctcaggggtggaactatgatcaaggtgaagacacttactgggaaggaaattgag 288 || |||||||| |||||||| |||||||||||||||||||| ||||| || ||||| ||| Sbjct: 1134 ctcaggctcagaggtggaaccatgatcaaggtgaagacactcactggaaaagaaatcgag 1193 Query: 289 attgatattgagcccactgacacaatcgatagaatcaaggaacgtgttgaggagaaagag 348 |||||||| || || || ||||| || ||| | ||||| ||||||||||| |||||||| Sbjct: 1194 attgatatcgaaccaaccgacactattgatcggatcaaagaacgtgttgaagagaaagaa 1253 Query: 349 ggtattccacctgttcaaca 368 || || || ||||||||||| Sbjct: 1254 ggcatccctcctgttcaaca 1273 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 338 aggagaaagagggtattccacctgttcaacagaggctcatctatgctgggaagcaa 393 |||| |||||||| || ||||||| |||||||||||| || | |||||| |||||| Sbjct: 1015 aggacaaagagggcataccacctgatcaacagaggctgatttttgctggtaagcaa 1070 Score = 48.1 bits (24), Expect = 0.036 Identities = 38/43 (88%) Strand = Plus / Plus Query: 70 gagagcancgacaccatcgacaacgtcaaggccaagatccagg 112 ||||||| ||||||||||||||| || || ||||| ||||||| Sbjct: 720 gagagcagcgacaccatcgacaatgttaaagccaaaatccagg 762
>gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis thaliana BAC T19E23 from chromosome I, complete sequence Length = 87618 Score = 186 bits (94), Expect = 6e-44 Identities = 187/218 (85%) Strand = Plus / Minus Query: 151 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagag 210 |||||||| |||||| | |||||||| |||||||||| |||||||||||||||||||| Sbjct: 59373 tttgctggtaagcagcttgaagatggtagaacattagcggattacaacattcagaaagaa 59314 Query: 211 tcgacgctccatttggtcctgaggctcaggggtggaactatgatcaaggtgaagacactt 270 ||||| || || ||||| ||||||| |||||||| |||||||| ||||||||||| || Sbjct: 59313 tcgactcttcacttggtattgaggcttaggggtgggactatgattaaggtgaagactctc 59254 Query: 271 actgggaaggaaattgagattgatattgagcccactgacacaatcgatagaatcaaggaa 330 || ||||||||||||||||||||||| || || || || || || ||| | || |||||| Sbjct: 59253 acagggaaggaaattgagattgatatcgaaccaaccgatactattgatcggattaaggaa 59194 Query: 331 cgtgttgaggagaaagagggtattccacctgttcaaca 368 ||||||||||||||||| ||||| || ||||||||||| Sbjct: 59193 cgtgttgaggagaaagaaggtatccctcctgttcaaca 59156 Score = 60.0 bits (30), Expect = 1e-05 Identities = 66/78 (84%) Strand = Plus / Minus Query: 397 gctgatgacaaaactgcaaaggactacaacatcgaaggtggttcagtgctccatcttgtg 456 |||||||||||||| ||||||||||||||||| || || || || || || ||||| || Sbjct: 58660 gctgatgacaaaacggcaaaggactacaacatagagggaggctctgttcttcatctggtt 58601 Query: 457 cttgctctgaggggtggt 474 ||||| || ||||||||| Sbjct: 58600 cttgcccttaggggtggt 58583 Score = 54.0 bits (27), Expect = 6e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| || ||||| || || |||||||| |||| ||||||||||||||| ||||| ||| Sbjct: 59885 accggaaaaaccataaccctagaggtcgaaagcagcgacaccatcgacaatgtcaaagcc 59826 Query: 103 aa 104 || Sbjct: 59825 aa 59824
>emb|X67957.1|AMUBIQMRP A.majus mRNA for ubiquitin (partial) Length = 1094 Score = 180 bits (91), Expect = 4e-42 Identities = 168/194 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||||||||||||||| || ||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 454 tgaccggcaagaccattaccctcgaggtcgagagctccgacaccattgacaatgtcaagg 513 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||||||||||||||| || || ||||||||||| ||||| || || ||||| | Sbjct: 514 ccaagatccaggacaaggaggggatcccaccagaccagcagaggctcatcttcgctggta 573 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || || || || ||||||||||||||||||||||| || | Sbjct: 574 agcagcttgaggatggtcgcaccttggccgactacaacattcagaaagagtcgactctgc 633 Query: 221 atttggtcctgagg 234 ||||||| |||||| Sbjct: 634 atttggtgctgagg 647 Score = 151 bits (76), Expect = 3e-33 Identities = 141/163 (86%) Strand = Plus / Plus Query: 44 ccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcca 103 |||||||||||||||| || |||||||||||| ||||| || |||||||| ||||| | Sbjct: 1 ccggcaagaccatcacccttgaggtcgagagctctgacactattgacaacgtgaaggcta 60 Query: 104 agatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagc 163 ||||||||||||||||||||||||||||||||||||| ||||| || || |||||||||| Sbjct: 61 agatccaggacaaggagggcattcccccagaccagcagaggctcatcttcgctggaaagc 120 Query: 164 agttggaagatgggcgaacattagctgattacaacattcagaa 206 | | || ||||| || || || ||||| |||||||||||||| Sbjct: 121 aactcgaggatggccgtactttggctgactacaacattcagaa 163 Score = 127 bits (64), Expect = 5e-26 Identities = 159/191 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || |||||||||||| || ||||| ||||| |||||| Sbjct: 225 ctgaccggcaagaccatcacccttgaggtcgagagctcggataccattgacaatgtcaag 284 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||| || |||||||||||||| || || ||||| ||||| ||||| || || |||||| Sbjct: 285 gccaaaattcaggacaaggagggaatcccaccagatcagcagaggcttatcttcgctgga 344 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| | || ||||| || || || ||||| |||||||| ||||| ||||| || || Sbjct: 345 aagcagcttgaggatggccgcactttggctgactacaacatccagaaggagtccaccctt 404 Query: 220 catttggtcct 230 || |||||||| Sbjct: 405 cacttggtcct 415 Score = 69.9 bits (35), Expect = 1e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 64 gaggtcgagagcancgacaccatcgacaacgtcaaggccaagatccaggacaaggagggc 123 ||||| |||||| ||||||||| ||||| || ||||| ||||| |||||||||||||| Sbjct: 705 gaggttgagagctccgacaccattgacaatgtgaaggctaagattcaggacaaggagggt 764 Query: 124 attcccccagaccagcaaaggctaatttttgctggaaagcag 165 || || || |||||||| ||||| || || ||||| |||||| Sbjct: 765 atcccaccggaccagcagaggctcatcttcgctggtaagcag 806
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 176 bits (89), Expect = 6e-41 Identities = 170/197 (86%) Strand = Plus / Plus Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| ||||||||||||| ||| | || || |||||||||||||| ||||| || || Sbjct: 15107565 aagcagctggaagatgggcgcacactggccgactacaacattcagaaggagtcaactctt 15107624 Query: 220 catttggtcctgaggctcaggggtggaactatgatcaaggtgaagacacttactgggaag 279 || |||||||| |||||||||||||| |||||||||||||| ||||| || ||||| || Sbjct: 15107625 cacttggtcctcaggctcaggggtggcactatgatcaaggttaagaccctcactggaaaa 15107684 Query: 280 gaaattgagattgatattgagcccactgacacaatcgatagaatcaaggaacgtgttgag 339 || ||||| ||||| ||||||||||| ||||| |||||||| |||||||| ||||||||| Sbjct: 15107685 gagattgaaattgacattgagcccaccgacacgatcgataggatcaaggagcgtgttgag 15107744 Query: 340 gagaaagagggtattcc 356 |||||||| || ||||| Sbjct: 15107745 gagaaagaaggcattcc 15107761 Score = 127 bits (64), Expect = 5e-26 Identities = 69/71 (97%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 22391408 aagaccatcacgctcgaggtcgagagcagcgacaccatcgacaatgtcaaggccaagatc 22391467 Query: 109 caggacaagga 119 ||||||||||| Sbjct: 22391468 caggacaagga 22391478 Score = 119 bits (60), Expect = 1e-23 Identities = 77/83 (92%) Strand = Plus / Plus Query: 37 acgctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtc 96 |||||||| || ||||| |||||||| ||||| ||||||| ||||||||||||||||||| Sbjct: 18500342 acgctgacggggaagacgatcacgctggaggtggagagcagcgacaccatcgacaacgtc 18500401 Query: 97 aaggccaagatccaggacaagga 119 ||||||||||||||||||||||| Sbjct: 18500402 aaggccaagatccaggacaagga 18500424 Score = 119 bits (60), Expect = 1e-23 Identities = 77/83 (92%) Strand = Plus / Plus Query: 37 acgctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtc 96 ||||| ||||| ||||| |||||||| ||||| ||||||| ||||||||||||||||||| Sbjct: 16919151 acgctcaccgggaagacgatcacgctggaggtggagagcagcgacaccatcgacaacgtc 16919210 Query: 97 aaggccaagatccaggacaagga 119 ||||||||||||||||||||||| Sbjct: 16919211 aaggccaagatccaggacaagga 16919233 Score = 111 bits (56), Expect = 3e-21 Identities = 76/83 (91%) Strand = Plus / Plus Query: 37 acgctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtc 96 |||||||| || ||| | |||||||| ||||| ||||||| ||||||||||||||||||| Sbjct: 18495091 acgctgacggggaagtcgatcacgctggaggtggagagcagcgacaccatcgacaacgtc 18495150 Query: 97 aaggccaagatccaggacaagga 119 ||||||||||||||||||||||| Sbjct: 18495151 aaggccaagatccaggacaagga 18495173 Score = 105 bits (53), Expect = 2e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 370 aggctcatctatgctgggaagcaactcgctgatgacaaaactgcaaaggactacaacatc 429 ||||| ||||||||||| ||||| || || || ||||| ||||| |||||||| |||||| Sbjct: 15107918 aggcttatctatgctggtaagcagcttgccgacgacaagactgcgaaggactataacatc 15107977 Query: 430 gaaggtggttcagtgctccatcttgtgcttgctctgaggggtggt 474 |||||||| || || ||||||||||| |||||||||||||||||| Sbjct: 15107978 gaaggtggctctgtcctccatcttgtccttgctctgaggggtggt 15108022 Score = 99.6 bits (50), Expect = 1e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 15106413 ctgacggggaagaccatcaccctcgaggtggagagcagcgacaccatcgacaacgtcaag 15106472 Query: 100 gccaagatccagg 112 ||||| ||||||| Sbjct: 15106473 gccaaaatccagg 15106485 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 193 tacaacattcagaaagagtcgacgct 218 |||||||||||||| ||||||||||| Sbjct: 16920216 tacaacattcagaaggagtcgacgct 16920241
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 176 bits (89), Expect = 6e-41 Identities = 170/197 (86%) Strand = Plus / Plus Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| ||||||||||||| ||| | || || |||||||||||||| ||||| || || Sbjct: 1541 aagcagctggaagatgggcgcacactggccgactacaacattcagaaggagtcaactctt 1600 Query: 220 catttggtcctgaggctcaggggtggaactatgatcaaggtgaagacacttactgggaag 279 || |||||||| |||||||||||||| |||||||||||||| ||||| || ||||| || Sbjct: 1601 cacttggtcctcaggctcaggggtggcactatgatcaaggttaagaccctcactggaaaa 1660 Query: 280 gaaattgagattgatattgagcccactgacacaatcgatagaatcaaggaacgtgttgag 339 || ||||| ||||| ||||||||||| ||||| |||||||| |||||||| ||||||||| Sbjct: 1661 gagattgaaattgacattgagcccaccgacacgatcgataggatcaaggagcgtgttgag 1720 Query: 340 gagaaagagggtattcc 356 |||||||| || ||||| Sbjct: 1721 gagaaagaaggcattcc 1737 Score = 105 bits (53), Expect = 2e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 370 aggctcatctatgctgggaagcaactcgctgatgacaaaactgcaaaggactacaacatc 429 ||||| ||||||||||| ||||| || || || ||||| ||||| |||||||| |||||| Sbjct: 1894 aggcttatctatgctggtaagcagcttgccgacgacaagactgcgaaggactataacatc 1953 Query: 430 gaaggtggttcagtgctccatcttgtgcttgctctgaggggtggt 474 |||||||| || || ||||||||||| |||||||||||||||||| Sbjct: 1954 gaaggtggctctgtcctccatcttgtccttgctctgaggggtggt 1998 Score = 99.6 bits (50), Expect = 1e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 389 ctgacggggaagaccatcaccctcgaggtggagagcagcgacaccatcgacaacgtcaag 448 Query: 100 gccaagatccagg 112 ||||| ||||||| Sbjct: 449 gccaaaatccagg 461
>dbj|AP005426.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0668D04 Length = 148848 Score = 176 bits (89), Expect = 6e-41 Identities = 170/197 (86%) Strand = Plus / Plus Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| ||||||||||||| ||| | || || |||||||||||||| ||||| || || Sbjct: 99208 aagcagctggaagatgggcgcacactggccgactacaacattcagaaggagtcaactctt 99267 Query: 220 catttggtcctgaggctcaggggtggaactatgatcaaggtgaagacacttactgggaag 279 || |||||||| |||||||||||||| |||||||||||||| ||||| || ||||| || Sbjct: 99268 cacttggtcctcaggctcaggggtggcactatgatcaaggttaagaccctcactggaaaa 99327 Query: 280 gaaattgagattgatattgagcccactgacacaatcgatagaatcaaggaacgtgttgag 339 || ||||| ||||| ||||||||||| ||||| |||||||| |||||||| ||||||||| Sbjct: 99328 gagattgaaattgacattgagcccaccgacacgatcgataggatcaaggagcgtgttgag 99387 Query: 340 gagaaagagggtattcc 356 |||||||| || ||||| Sbjct: 99388 gagaaagaaggcattcc 99404 Score = 105 bits (53), Expect = 2e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 370 aggctcatctatgctgggaagcaactcgctgatgacaaaactgcaaaggactacaacatc 429 ||||| ||||||||||| ||||| || || || ||||| ||||| |||||||| |||||| Sbjct: 99561 aggcttatctatgctggtaagcagcttgccgacgacaagactgcgaaggactataacatc 99620 Query: 430 gaaggtggttcagtgctccatcttgtgcttgctctgaggggtggt 474 |||||||| || || ||||||||||| |||||||||||||||||| Sbjct: 99621 gaaggtggctctgtcctccatcttgtccttgctctgaggggtggt 99665 Score = 99.6 bits (50), Expect = 1e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||||||| |||||||||||||||||||||| Sbjct: 98056 ctgacggggaagaccatcaccctcgaggtggagagcagcgacaccatcgacaacgtcaag 98115 Query: 100 gccaagatccagg 112 ||||| ||||||| Sbjct: 98116 gccaaaatccagg 98128
>gb|DQ216245.1| Taeniopygia guttata clone 0065P0025D10 ubiquitin C variant 5-like mRNA, complete sequence Length = 1438 Score = 172 bits (87), Expect = 9e-40 Identities = 176/206 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || ||||||||||| ||||||||| Sbjct: 435 ctgactggcaagaccatcactcttgaggtggagcccagtgacaccatcgagaacgtcaag 494 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 495 gccaagatccaggacaaggagggcattcccccagaccagcagaggctgattttcgctggc 554 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| ||||||||||||| || | |||| |||||||| |||||||| || || || Sbjct: 555 aagcagctggaagatgggcgcaccctgtctgactacaacatccagaaagaatccaccctg 614 Query: 220 catttggtcctgaggctcaggggtgg 245 || |||| ||| | ||||||||||| Sbjct: 615 cacctggtgctgcgcctcaggggtgg 640 Score = 139 bits (70), Expect = 1e-29 Identities = 120/137 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||| ||| || |||||||| || || || ||| Sbjct: 663 ctgaccggcaagaccatcactctcgaggtggagcccagtgacaccattgaaaatgtgaag 722 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 723 gccaagatccaggacaaggaaggcattcccccagaccagcagaggctgattttcgctggt 782 Query: 160 aagcagttggaagatgg 176 |||||| |||| ||||| Sbjct: 783 aagcagctggaggatgg 799 Score = 137 bits (69), Expect = 5e-29 Identities = 122/140 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || || || ||| || ||||||||||| || || ||| Sbjct: 891 ctgactggcaagaccatcaccctggaagttgagcccagtgacaccatcgagaatgtgaag 950 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 951 gccaagatccaggacaaggaaggcattcccccagaccagcagaggctgattttcgctggc 1010 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 1011 aagcagctggaagatgggcg 1030 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| || || ||||||||||||||||||||||| || || || || |||||| Sbjct: 18 gacaccatcgagaatgtgaaggccaagatccaggacaaggaaggtatccctcctgaccag 77 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcg 179 || ||||| || |||||||| |||||| ||||||||||||| Sbjct: 78 cagaggctgatctttgctggcaagcagctggaagatgggcg 118 Score = 81.8 bits (41), Expect = 3e-12 Identities = 115/140 (82%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || || || ||| || |||||||| || || || ||| Sbjct: 207 ctgactggcaagaccatcaccctggaagttgagcccagtgacaccattgaaaatgtgaag 266 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || || |||||||| ||||| || |||||||| Sbjct: 267 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggt 326 Query: 160 aagcagttggaagatgggcg 179 ||||| |||| |||||||| Sbjct: 327 aagcaactggaggatgggcg 346
>emb|X66876.1|AOPOLUBI A.officinalis mRNA for poly-ubiquitin Length = 743 Score = 170 bits (86), Expect = 4e-39 Identities = 169/197 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||| Sbjct: 93 ctgaccggcaagaccatcacgttggaggtcgagagctctgacaccatcgacaacgtcaag 152 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 153 gcgaagatccaagacaaggagggcatcccccctgaccagcagaggctcatctttgccggt 212 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 || || | || ||||| || || | |||||||||||||||||||| |||||||| ||| Sbjct: 213 aaacaactcgaggatggccggactctcgctgattacaacattcagaaggagtcgaccctc 272 Query: 220 catttggtcctgaggct 236 || ||||| |||||||| Sbjct: 273 cacttggtgctgaggct 289 Score = 77.8 bits (39), Expect = 4e-11 Identities = 117/143 (81%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| ||||||||||||||||| ||||| ||||| |||||||| ||||| || || ||| Sbjct: 360 gacacgatcgacaacgtcaaggcgaagatacaggataaggaggggattccgccggatcag 419 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||| | || || || || |||||| | ||||||||| | || | ||||||||||| Sbjct: 420 cagaggttgatcttcgcagggaagcagcttgaagatgggaggactcttgctgattacaat 479 Query: 199 attcagaaagagtcgacgctcca 221 |||||||| ||||| || ||||| Sbjct: 480 attcagaaggagtctactctcca 502
>emb|AJ697758.1| Eucalyptus globulus subsp. globulus partial mRNA for putative polyubiquitin Length = 228 Score = 167 bits (84), Expect = 6e-38 Identities = 113/123 (91%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 91 accggcaagaccatcaccctcgaggtcgagagctccgacaccatcgacaacgtcaaggcc 150 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||||||||| || |||||||| |||||||| ||||| || || ||||||||| Sbjct: 151 aagatccaggacaaggaaggaattcccccggaccagcagaggctgatcttcgctggaaag 210 Query: 163 cag 165 ||| Sbjct: 211 cag 213
>gb|DQ216252.1| Taeniopygia guttata clone 0058P0005E02 ubiquitin C variant 12-like mRNA, complete sequence Length = 1378 Score = 165 bits (83), Expect = 2e-37 Identities = 175/206 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || ||||||||||| ||||||||| Sbjct: 546 ctgaccggcaagaccatcaccctggaagttgagcccagtgacaccatcgagaacgtcaag 605 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| |||||||||||||||||||| ||||| || |||||||| Sbjct: 606 gccaagatccaggacaaggaaggcattcccccagaccagcagaggctgatctttgctggt 665 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| ||||||||||||| || | | || |||||||| ||||||||||| || || Sbjct: 666 aagcagctggaagatgggcgcaccctctccgactacaacatccagaaagagtcaactctg 725 Query: 220 catttggtcctgaggctcaggggtgg 245 || |||| ||| | ||||||||||| Sbjct: 726 cacctggtgctgcgcctcaggggtgg 751 Score = 157 bits (79), Expect = 6e-35 Identities = 174/206 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || |||||||| || || |||||| Sbjct: 90 ctgactggcaagaccatcacccttgaggtggagcccagtgacaccattgaaaatgtcaag 149 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 150 gccaagatccaggacaaggagggcattcccccagaccagcagaggctgatctttgctggc 209 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||| |||||||| || | | || |||||||| ||||||||||| || ||| Sbjct: 210 aagcagctggaggatgggcgcaccctctccgactacaacatccagaaagagtcaactctc 269 Query: 220 catttggtcctgaggctcaggggtgg 245 || |||| ||| | ||||||||||| Sbjct: 270 cacctggtgctgcgcctcaggggtgg 295 Score = 129 bits (65), Expect = 1e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| || |||||| Sbjct: 318 ctgaccggcaagaccatcacccttgaggtggagcccagtgacaccatcgagaatgtcaag 377 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || ||||| || ||| |||| ||||| || |||||||| Sbjct: 378 gccaagatccaggacaaggaaggtattcctcctgacaagcagaggctgatctttgctggt 437 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 438 aagcagctggaagatgggcg 457 Score = 123 bits (62), Expect = 8e-25 Identities = 118/137 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || |||||||| || || || ||| Sbjct: 774 ctgaccggcaagaccatcactcttgaggtggagcccagtgacaccattgaaaatgtgaag 833 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 834 gccaagatccaggacaaggaaggcattccaccagaccagcagaggctgattttcgctggt 893 Query: 160 aagcagttggaagatgg 176 |||||| |||| ||||| Sbjct: 894 aagcagctggaggatgg 910 Score = 113 bits (57), Expect = 7e-22 Identities = 119/140 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || || || ||| || ||||||||||| || |||||| Sbjct: 1002 ctgactggcaagaccatcaccctggaagttgagcccagtgacaccatcgagaatgtcaag 1061 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || || |||||||| ||||| ||||| ||||| Sbjct: 1062 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgattttcgctggc 1121 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 1122 aagcagctggaagatgggcg 1141
>emb|AJ841743.1| Plantago major ubi1 gene for ubiquitin Length = 231 Score = 163 bits (82), Expect = 9e-37 Identities = 159/185 (85%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||||||||| || || ||||| ||||| ||||||||| ||||| || ||||||||| Sbjct: 28 ggcaagaccattacccttgaggtggagagttccgacaccattgacaatgttaaggccaag 87 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||||||||||||||||||||||||||||||||| ||| | || ||||| ||||||||| Sbjct: 88 atccaggacaaggagggcattcccccagaccagcagaggttgatctttgccggaaagcag 147 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttg 225 | || ||||| || || | || ||||||||||||||||||||||| || ||||||||| Sbjct: 148 cttgaggatggtcgcacgcttgccgattacaacattcagaaagagtccactctccatttg 207 Query: 226 gtcct 230 ||||| Sbjct: 208 gtcct 212
>emb|AJ844617.1| Plantago major mRNA for polyubiquitin (ubq3 gene) Length = 1319 Score = 163 bits (82), Expect = 9e-37 Identities = 159/185 (85%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||||||||| || || ||||| ||||| ||||||||| ||||| || ||||||||| Sbjct: 16 ggcaagaccattacccttgaggtggagagttccgacaccattgacaatgttaaggccaag 75 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||||||||||||||||||||||||||||||||| ||| | || ||||| ||||||||| Sbjct: 76 atccaggacaaggagggcattcccccagaccagcagaggttgatctttgccggaaagcag 135 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttg 225 | || ||||| || || | || ||||||||||||||||||||||| || ||||||||| Sbjct: 136 cttgaggatggtcgcacgcttgccgattacaacattcagaaagagtccactctccatttg 195 Query: 226 gtcct 230 ||||| Sbjct: 196 gtcct 200 Score = 129 bits (65), Expect = 1e-26 Identities = 157/188 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 |||||||| || || || || ||||| |||||| |||||||| ||||| ||||||||| Sbjct: 241 accggcaaaactattacccttgaggttgagagctctgacaccattgacaatgtcaaggcc 300 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| |||||||| |||||||| |||||||| ||| | || |||||||||||| Sbjct: 301 aagatccaggataaggagggtattcccccggaccagcagaggttgatctttgctggaaag 360 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || | ||||| |||||||| ||||| ||||| || |||||| Sbjct: 361 cagcttgaggatggtcgtaccctcgctgactacaacatccagaaggagtccaccctccat 420 Query: 223 ttggtcct 230 |||||||| Sbjct: 421 ttggtcct 428 Score = 127 bits (64), Expect = 5e-26 Identities = 141/167 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||| || || || ||||| |||||| |||||||| |||||||||||| Sbjct: 466 ctgactggcaagactattacccttgaggttgagagctctgacaccattgacaacgtcaag 525 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| |||||||||||||| ||||| ||| | || |||||||| Sbjct: 526 gccaagatccaggacaaggaaggcattcccccagatcagcagaggttgatctttgctggt 585 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaa 206 || || | || |||||||| || | |||||||||||||||||||| Sbjct: 586 aaacaacttgaggatgggcgtacccttgctgattacaacattcagaa 632 Score = 101 bits (51), Expect = 3e-18 Identities = 140/170 (82%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| | ||||| |||||| |||||||| || || || |||| Sbjct: 695 tgaccggcaagaccatcaccttggaggttgagagctcagacaccattgataatgtgaagg 754 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||| |||||||||||||| || || || ||||||||||| || || || |||||||||| Sbjct: 755 ccaaaatccaggacaaggaaggtatcccaccagaccagcagagacttatctttgctggaa 814 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagag 210 |||| ||||| ||||| || || | ||||| ||||| || ||||||||| Sbjct: 815 agcaattggaggatggtcgtactctggctgactacaatatccagaaagag 864 Score = 99.6 bits (50), Expect = 1e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 52 accatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatccag 111 |||||||| || ||||| |||||| || |||||||| || || ||||||||||| ||| Sbjct: 934 accatcactctggaggtagagagctctgataccatcgataatgtgaaggccaagattcag 993 Query: 112 gacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttggaa 171 || |||||||| ||||| ||||||||||| ||||| ||||| |||||||| |||||||| Sbjct: 994 gataaggagggtattccaccagaccagcagaggctcattttcgctggaaaacagttggag 1053 Query: 172 gatgg 176 ||||| Sbjct: 1054 gatgg 1058
>ref|NM_129175.1| Arabidopsis thaliana protein binding / structural constituent of ribosome AT2G36170 mRNA, complete cds Length = 656 Score = 161 bits (81), Expect = 4e-36 Identities = 155/180 (86%) Strand = Plus / Plus Query: 36 aacgctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgt 95 |||||| ||||||||||||||||| |||||||||||||||| |||||||||||||| || Sbjct: 54 aacgctaaccggcaagaccatcaccctcgaggtcgagagcagtgacaccatcgacaatgt 113 Query: 96 caaggccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgc 155 ||||||||||||||||||||| || || ||||| || |||||||| ||| | || || || Sbjct: 114 caaggccaagatccaggacaaagaaggaattcctccggaccagcagaggttgatcttcgc 173 Query: 156 tggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 ||||| ||| | |||||||| || || || ||||| |||||||| |||||||||||||| Sbjct: 174 cggaaaacagcttgaagatggtcgtaccttggctgactacaacatccagaaagagtcgac 233
>gb|AY056360.1| Arabidopsis thaliana putative ubiquitin extension protein UBQ2 (At2g36170) mRNA, complete cds Length = 418 Score = 161 bits (81), Expect = 4e-36 Identities = 155/180 (86%) Strand = Plus / Plus Query: 36 aacgctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgt 95 |||||| ||||||||||||||||| |||||||||||||||| |||||||||||||| || Sbjct: 18 aacgctaaccggcaagaccatcaccctcgaggtcgagagcagtgacaccatcgacaatgt 77 Query: 96 caaggccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgc 155 ||||||||||||||||||||| || || ||||| || |||||||| ||| | || || || Sbjct: 78 caaggccaagatccaggacaaagaaggaattcctccggaccagcagaggttgatcttcgc 137 Query: 156 tggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 ||||| ||| | |||||||| || || || ||||| |||||||| |||||||||||||| Sbjct: 138 cggaaaacagcttgaagatggtcgtaccttggctgactacaacatccagaaagagtcgac 197
>gb|AF360311.1| Arabidopsis thaliana putative ubiquitin extension protein UBQ2 (At2g36170) mRNA, complete cds Length = 673 Score = 161 bits (81), Expect = 4e-36 Identities = 155/180 (86%) Strand = Plus / Plus Query: 36 aacgctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgt 95 |||||| ||||||||||||||||| |||||||||||||||| |||||||||||||| || Sbjct: 54 aacgctaaccggcaagaccatcaccctcgaggtcgagagcagtgacaccatcgacaatgt 113 Query: 96 caaggccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgc 155 ||||||||||||||||||||| || || ||||| || |||||||| ||| | || || || Sbjct: 114 caaggccaagatccaggacaaagaaggaattcctccggaccagcagaggttgatcttcgc 173 Query: 156 tggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 ||||| ||| | |||||||| || || || ||||| |||||||| |||||||||||||| Sbjct: 174 cggaaaacagcttgaagatggtcgtaccttggctgactacaacatccagaaagagtcgac 233
>gb|AF506969.1| Equus caballus ubiquitin mRNA, complete cds Length = 1157 Score = 161 bits (81), Expect = 4e-36 Identities = 152/176 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || |||||||||||| ||||||||| Sbjct: 140 ctgaccggcaagaccatcaccctggaggtggagcccagcgacaccatcgagaacgtcaag 199 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 200 gccaagatccaggataaggagggcatcccccccgaccagcagaggctcatctttgcaggc 259 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | | ||||||||||| |||||||||||||| Sbjct: 260 aagcagctggaagatggccgcactctttccgattacaacatccagaaagagtcgac 315 Score = 153 bits (77), Expect = 9e-34 Identities = 151/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || |||||||||||| || || ||| Sbjct: 824 ctgaccggcaagaccatcaccctggaggtggagcccagcgacaccatcgagaatgtgaag 883 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 884 gccaagatccaggataaggagggcatcccccccgaccagcagaggctcatctttgcaggc 943 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 944 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 999 Score = 147 bits (74), Expect = 5e-32 Identities = 148/173 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || |||||||||||| ||||||||| Sbjct: 368 ctgaccggcaagaccatcaccctggaggtggagcccagcgacaccatcgagaacgtcaag 427 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 428 gccaagatccaggataaggagggcatcccccccgaccagcagaggctcatctttgcaggc 487 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||| |||||||| || | |||| |||||||| ||||| ||||| Sbjct: 488 aagcagctggaggatgggcgcaccctgtctgactacaacatccagaaggagtc 540 Score = 123 bits (62), Expect = 8e-25 Identities = 145/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||||||||||||||| || || ||||| ||| || |||||||||||| || || ||| Sbjct: 596 ctgaccggcaagaccattaccctggaggtggagcccagcgacaccatcgagaatgtgaag 655 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||||||||| ||||| |||||||| ||| | || ||||| || Sbjct: 656 gccaagatccaggataaggagggcatcccccccgaccagcagaggttcatctttgcaggc 715 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||| |||||||| || | ||||||||||||| ||||| ||||| Sbjct: 716 aagcagctggaggatgggcgcaccctgtctgattacaacatccagaaggagtc 768
>ref|NM_001009202.1| Ovis aries polyubiquitin (LOC443016), mRNA Length = 1102 Score = 161 bits (81), Expect = 4e-36 Identities = 152/176 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 801 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 860 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 861 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 920 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | |||||||||||||||||||||||||||| Sbjct: 921 aagcagctggaagatggccgcactctttctgattacaacattcagaaagagtcgac 976 Score = 145 bits (73), Expect = 2e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 573 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 632 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 633 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 692 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| ||||| |||||||| Sbjct: 693 aagcagctggaagatggccgcactctttctgattacaacatccagaaggagtcgac 748 Score = 145 bits (73), Expect = 2e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 345 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 404 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 405 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 464 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| ||||| |||||||| Sbjct: 465 aagcagctggaagatggccgcactctttctgattacaacatccagaaggagtcgac 520 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| || || ||| Sbjct: 117 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaatgtgaag 176 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 177 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 236 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| ||||| |||||||| Sbjct: 237 aagcagctggaagatggccgcactctttctgattacaacatccagaaggagtcgac 292
>gb|AF038129.1|AF038129 Ovis aries polyubiquitin mRNA, complete cds Length = 1102 Score = 161 bits (81), Expect = 4e-36 Identities = 152/176 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 801 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 860 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 861 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 920 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | |||||||||||||||||||||||||||| Sbjct: 921 aagcagctggaagatggccgcactctttctgattacaacattcagaaagagtcgac 976 Score = 145 bits (73), Expect = 2e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 573 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 632 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 633 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 692 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| ||||| |||||||| Sbjct: 693 aagcagctggaagatggccgcactctttctgattacaacatccagaaggagtcgac 748 Score = 145 bits (73), Expect = 2e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 345 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 404 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 405 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 464 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| ||||| |||||||| Sbjct: 465 aagcagctggaagatggccgcactctttctgattacaacatccagaaggagtcgac 520 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| || || ||| Sbjct: 117 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaatgtgaag 176 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 177 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 236 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| ||||| |||||||| Sbjct: 237 aagcagctggaagatggccgcactctttctgattacaacatccagaaggagtcgac 292
>emb|X64344.1|PCCUBI41 P.crispum mRNA Pcubi4-1 for polyubiquitin Length = 1592 Score = 159 bits (80), Expect = 1e-35 Identities = 166/195 (85%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||||||||| || |||||||| ||| ||||| |||||||||||||||||| Sbjct: 51 accggaaagaccatcactcttgaggtcgaaagctctgacacaatcgacaacgtcaaggcc 110 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||| ||||||||||| || ||||||||||||||||| || | || |||||||||||| Sbjct: 111 aagattcaggacaaggaagggattcccccagaccagcagagattgatctttgctggaaag 170 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 |||||||||||||| | || | ||||| |||||||| ||||| ||||| || |||||| Sbjct: 171 cagttggaagatggcaggactcttgctgactacaacatccagaaggagtcaactctccat 230 Query: 223 ttggtcctgaggctc 237 ||||| || |||||| Sbjct: 231 ttggtgctcaggctc 245 Score = 111 bits (56), Expect = 3e-21 Identities = 94/107 (87%) Strand = Plus / Plus Query: 70 gagagcancgacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattccc 129 |||||| ||||||||| ||||| |||||||| |||||||||||||| || ||||||||| Sbjct: 762 gagagctccgacaccattgacaatgtcaaggctaagatccaggacaaagaaggcattccc 821 Query: 130 ccagaccagcaaaggctaatttttgctggaaagcagttggaagatgg 176 ||||||||||| || | ||||| ||||| ||||||||||||||||| Sbjct: 822 ccagaccagcagagattgattttcgctggcaagcagttggaagatgg 868 Score = 105 bits (53), Expect = 2e-19 Identities = 100/116 (86%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||| ||||| || || || |||||| ||||||||| |||||||||||||| |||||| Sbjct: 513 aagacgatcactcttgaagttgagagctccgacaccattgacaacgtcaaggctaagatc 572 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagca 164 ||||||||||| || ||||||||||||||||| ||| | || || ||||||||||| Sbjct: 573 caggacaaggaaggaattcccccagaccagcagaggttgatcttcgctggaaagca 628 Score = 95.6 bits (48), Expect = 2e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 |||||||| || || |||||||| ||| ||||| || || || || ||||||||||| Sbjct: 285 aagaccattactcttgaggtcgaaagctctgacacaattgataatgttaaggccaagatt 344 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||||||||| ||||||||||||||||| ||| | || ||||||||||| || | Sbjct: 345 caggacaaggagggaattcccccagaccagcagaggttgatctttgctggaaaacaactt 404 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggt 227 || ||||| | || | ||||| |||||||| ||||| ||||| |||||||||||||| Sbjct: 405 gaggatggcaggacccttgctgactacaacatccagaaggagtctacgctccatttggt 463 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| || ||||| || ||||||||||| ||||| |||||||| ||||| ||||| ||| Sbjct: 1227 gacactattgacaatgtgaaggccaagattcaggataaggagggtattcctccagatcag 1286 Query: 139 caaaggctaatttttgctggaaagcag 165 || ||| | || ||||||||||||||| Sbjct: 1287 cagaggttgatctttgctggaaagcag 1313 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| ||||| || ||||||||||||||||| ||||| || || || ||||||||| Sbjct: 999 gacaccattgacaatgtgaaggccaagatccaggataaggaaggaatcccaccagaccag 1058 Query: 139 caaaggctaatttttgctggaaagcagttggaaga 173 || | | || |||||||| ||||| |||||||| Sbjct: 1059 cagcgtttgatctttgctggcaagcaattggaaga 1093
>gb|DQ216248.1| Taeniopygia guttata clone 0058P0029E05 ubiquitin C variant 8-like mRNA, complete sequence Length = 1378 Score = 157 bits (79), Expect = 6e-35 Identities = 174/206 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || |||||||| || || |||||| Sbjct: 90 ctgactggcaagaccatcacccttgaggtggagcccagtgacaccattgaaaatgtcaag 149 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 150 gccaagatccaggacaaggagggcattcccccagaccagcagaggctgatctttgctggc 209 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||| |||||||| || | | || |||||||| ||||||||||| || ||| Sbjct: 210 aagcagctggaggatgggcgcaccctctccgactacaacatccagaaagagtcaactctc 269 Query: 220 catttggtcctgaggctcaggggtgg 245 || |||| ||| | ||||||||||| Sbjct: 270 cacctggtgctgcgcctcaggggtgg 295 Score = 139 bits (70), Expect = 1e-29 Identities = 120/137 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || | ||| || ||||||||||| ||||||||| Sbjct: 546 ctgaccggcaagaccatcaccctggaacttgagcccagtgacaccatcgagaacgtcaag 605 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| ||||||||||| |||||||| ||||| || |||||||| Sbjct: 606 gccaagatccaggacaaggaaggcattccccccgaccagcagaggctgatctttgctggc 665 Query: 160 aagcagttggaagatgg 176 |||||| |||||||||| Sbjct: 666 aagcagctggaagatgg 682 Score = 123 bits (62), Expect = 8e-25 Identities = 118/137 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || |||||||| || || || ||| Sbjct: 774 ctgaccggcaagaccatcactcttgaggtggagcccagtgacaccattgaaaatgtgaag 833 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 834 gccaagatccaggacaaggaaggcattccaccagaccagcagaggctgattttcgctggt 893 Query: 160 aagcagttggaagatgg 176 |||||| |||| ||||| Sbjct: 894 aagcagctggaggatgg 910 Score = 113 bits (57), Expect = 7e-22 Identities = 119/140 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || || || ||| || ||||||||||| || |||||| Sbjct: 1002 ctgactggcaagaccatcaccctggaagttgagcccagtgacaccatcgagaatgtcaag 1061 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || || |||||||| ||||| ||||| ||||| Sbjct: 1062 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgattttcgctggc 1121 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 1122 aagcagctggaagatgggcg 1141 Score = 105 bits (53), Expect = 2e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| || |||||||||||||||||||||||||| || ||||| || ||| || Sbjct: 357 gacaccatcgagaatgtcaaggccaagatccaggacaaggaaggtattcctcctgacaag 416 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcg 179 || ||||| || |||||||| |||||| ||||||||||||| Sbjct: 417 cagaggctgatctttgctggtaagcagctggaagatgggcg 457
>gb|DQ216241.1| Taeniopygia guttata clone 0058P0057E02 ubiquitin C variant 2-like mRNA, complete sequence Length = 1373 Score = 155 bits (78), Expect = 2e-34 Identities = 149/173 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || |||||||| || || || ||| Sbjct: 90 ctgaccggcaagaccatcacccttgaggtggagcccagtgacaccattgaaaatgtgaag 149 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 150 gccaagatccaggacaaggagggcattcccccagaccagcagaggctgatctttgctggt 209 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 210 aagcagctggaagatggccgcaccctctctgactacaacatccagaaagagtc 262 Score = 145 bits (73), Expect = 2e-31 Identities = 123/140 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 774 ctgactggcaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtcaag 833 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||| || || |||||||| ||||| || |||||||| Sbjct: 834 gccaagatccaggacaaggagggcatccctcctgaccagcagaggctgatctttgctggc 893 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 894 aagcagctggaagatgggcg 913 Score = 127 bits (64), Expect = 5e-26 Identities = 105/119 (88%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||| ||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 1002 ctgactggcaggaccatcactctcgaggtggagcccagtgacaccatcgagaatgtcaag 1061 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgg 158 |||||||||||||||||||| |||||||||||||||||||| ||||| || |||||||| Sbjct: 1062 gccaagatccaggacaaggaaggcattcccccagaccagcagaggctgatctttgctgg 1120 Score = 121 bits (61), Expect = 3e-24 Identities = 120/140 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||| ||| || |||||||| || || || ||| Sbjct: 318 ctgaccggcaagaccatcactctcgaggtggagcccagtgacaccattgaaaatgtgaag 377 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || || |||||||| ||||| || |||||||| Sbjct: 378 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggc 437 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 438 aagcagctggaagatgggcg 457 Score = 109 bits (55), Expect = 1e-20 Identities = 168/206 (81%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || |||||||| || || |||||| Sbjct: 546 ctgaccggcaagaccatcaccctggaagttgagcccagtgacaccattgagaatgtcaag 605 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| || || || || |||||||| ||||| || |||||||| Sbjct: 606 gccaagatccaggataaggaaggtatccctcctgaccagcagaggctgatctttgctggc 665 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| ||||||||||||| || | |||| |||||||| ||||| ||||| || || Sbjct: 666 aagcagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtcaactctg 725 Query: 220 catttggtcctgaggctcaggggtgg 245 || | |||||| | ||||||||||| Sbjct: 726 caccttgtcctgcgcctcaggggtgg 751
>gb|DQ216240.1| Taeniopygia guttata clone 0061P0001C12 ubiquitin C variant 2-like mRNA, complete sequence Length = 1530 Score = 155 bits (78), Expect = 2e-34 Identities = 149/173 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || |||||||| || || || ||| Sbjct: 90 ctgaccggcaagaccatcacccttgaggtggagcccagtgacaccattgaaaatgtgaag 149 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 150 gccaagatccaggacaaggagggcattcccccagaccagcagaggctgatctttgctggt 209 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 210 aagcagctggaagatggccgcaccctctctgactacaacatccagaaagagtc 262 Score = 153 bits (77), Expect = 9e-34 Identities = 124/140 (88%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 1003 ctgactggcaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtcaag 1062 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| |||||||||||||||||||| ||||| || |||||||| Sbjct: 1063 gccaagatccaggacaaggaaggcattcccccagaccagcagaggctgatctttgctggc 1122 Query: 160 aagcagttggaagatgggcg 179 |||||| |||| |||||||| Sbjct: 1123 aagcagctggaggatgggcg 1142 Score = 145 bits (73), Expect = 2e-31 Identities = 123/140 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 775 ctgactggcaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtcaag 834 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||| || || |||||||| ||||| || |||||||| Sbjct: 835 gccaagatccaggacaaggagggcatccctcctgaccagcagaggctgatctttgctggc 894 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 895 aagcagctggaagatgggcg 914 Score = 121 bits (61), Expect = 3e-24 Identities = 120/140 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||| ||| || |||||||| || || || ||| Sbjct: 318 ctgaccggcaagaccatcactctcgaggtggagcccagtgacaccattgaaaatgtgaag 377 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || || |||||||| ||||| || |||||||| Sbjct: 378 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggc 437 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 438 aagcagctggaagatgggcg 457 Score = 109 bits (55), Expect = 1e-20 Identities = 168/206 (81%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || |||||||| || || |||||| Sbjct: 546 ctgaccggcaagaccatcaccctggaagttgagcccagtgacaccattgagaatgtcaag 605 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| || || || || |||||||| ||||| || |||||||| Sbjct: 606 gccaagatccaggataaggaaggtatccctcctgaccagcagaggctgatctttgctggc 665 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| ||||||||||||| || | |||| |||||||| ||||| ||||| || || Sbjct: 666 aagcagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtcaactctg 725 Query: 220 catttggtcctgaggctcaggggtgg 245 || | |||||| | ||||||||||| Sbjct: 726 caccttgtcctgcgcctcaggggtgg 751
>gb|DQ216239.1| Taeniopygia guttata clone 0058P0040D01 ubiquitin C variant 2-like mRNA, complete sequence Length = 1376 Score = 155 bits (78), Expect = 2e-34 Identities = 149/173 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || |||||||| || || || ||| Sbjct: 90 ctgaccggcaagaccatcacccttgaggtggagcccagtgacaccattgaaaatgtgaag 149 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 150 gccaagatccaggacaaggagggcattcccccagaccagcagaggctgatctttgctggt 209 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 210 aagcagctggaagatggccgcaccctctctgactacaacatccagaaagagtc 262 Score = 145 bits (73), Expect = 2e-31 Identities = 123/140 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 774 ctgactggcaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtcaag 833 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||| || || |||||||| ||||| || |||||||| Sbjct: 834 gccaagatccaggacaaggagggcatccctcctgaccagcagaggctgatctttgctggc 893 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 894 aagcagctggaagatgggcg 913 Score = 127 bits (64), Expect = 5e-26 Identities = 105/119 (88%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||| ||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 1002 ctgactggcaggaccatcactctcgaggtggagcccagtgacaccatcgagaatgtcaag 1061 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgg 158 |||||||||||||||||||| |||||||||||||||||||| ||||| || |||||||| Sbjct: 1062 gccaagatccaggacaaggaaggcattcccccagaccagcagaggctgatctttgctgg 1120 Score = 121 bits (61), Expect = 3e-24 Identities = 120/140 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||| ||| || |||||||| || || || ||| Sbjct: 318 ctgaccggcaagaccatcactctcgaggtggagcccagtgacaccattgaaaatgtgaag 377 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || || |||||||| ||||| || |||||||| Sbjct: 378 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggc 437 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 438 aagcagctggaagatgggcg 457 Score = 109 bits (55), Expect = 1e-20 Identities = 168/206 (81%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || |||||||| || || |||||| Sbjct: 546 ctgaccggcaagaccatcaccctggaagttgagcccagtgacaccattgagaatgtcaag 605 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| || || || || |||||||| ||||| || |||||||| Sbjct: 606 gccaagatccaggataaggaaggtatccctcctgaccagcagaggctgatctttgctggc 665 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| ||||||||||||| || | |||| |||||||| ||||| ||||| || || Sbjct: 666 aagcagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtcaactctg 725 Query: 220 catttggtcctgaggctcaggggtgg 245 || | |||||| | ||||||||||| Sbjct: 726 caccttgtcctgcgcctcaggggtgg 751
>gb|DQ216236.1| Taeniopygia guttata clone 0058P0054D08 ubiquitin C variant 1-like mRNA, complete sequence Length = 1150 Score = 155 bits (78), Expect = 2e-34 Identities = 149/173 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || |||||||| || || |||||| Sbjct: 90 ctgaccggcaagaccatcacccttgaggtggagcccagtgacaccattgaaaatgtcaag 149 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| |||||||||||||||||||| ||||| || |||||||| Sbjct: 150 gccaagatccaggacaaggaaggcattcccccagaccagcagaggctgatctttgctggt 209 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| ||||||||||||| | ||||| |||||||| ||||||||||| Sbjct: 210 aagcagctggaagatgggcgtaggcgggctgactacaacatccagaaagagtc 262 Score = 123 bits (62), Expect = 8e-25 Identities = 118/137 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || || || ||| || |||||||| || || || ||| Sbjct: 774 ctgactggcaagaccatcaccctggaagttgagcccagtgacaccattgaaaatgtgaag 833 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||| ||||| ||||| || |||||||| Sbjct: 834 gccaagatccaggacaaggagggcattcccccagatcagcagaggctgatctttgctggc 893 Query: 160 aagcagttggaagatgg 176 |||||| |||||||||| Sbjct: 894 aagcagctggaagatgg 910 Score = 115 bits (58), Expect = 2e-22 Identities = 117/137 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||| ||| || ||||||||||| ||||| ||| Sbjct: 546 ctgaccggcaagaccatcactctcgaggtggagcccagtgacaccatcgagaacgtgaag 605 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| || || || || |||||||| ||||| || ||||| || Sbjct: 606 gccaagatccaggataaggaaggtatccctcctgaccagcagaggctgatctttgccggc 665 Query: 160 aagcagttggaagatgg 176 |||||| |||||||||| Sbjct: 666 aagcagctggaagatgg 682 Score = 97.6 bits (49), Expect = 4e-17 Identities = 117/140 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| || || |||||||| || || |||||| Sbjct: 318 ctgactggcaagaccatcactcttgaggtggaacccagtgacaccattgagaatgtcaag 377 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||| || || |||||||| ||||| ||||| ||||| Sbjct: 378 gccaagatccaggataaggaaggcatccctcctgaccagcagaggctgattttcgctggc 437 Query: 160 aagcagttggaagatgggcg 179 |||||| |||| |||||||| Sbjct: 438 aagcagctggaggatgggcg 457
>gb|DQ216235.1| Taeniopygia guttata clone 0058P0048G02 ubiquitin C variant 1-like mRNA, complete sequence Length = 1305 Score = 153 bits (77), Expect = 9e-34 Identities = 124/140 (88%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || || || ||| || ||||||||| || || || ||| Sbjct: 775 ctgactggcaagaccatcaccctggaagttgagcccagcgacaccattgaaaatgtgaag 834 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 835 gccaagatccaggacaaggagggcattcccccagaccagcagaggctgatttttgctggc 894 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 895 aagcagctggaagatgggcg 914 Score = 145 bits (73), Expect = 2e-31 Identities = 123/140 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || |||||||| || || || ||| Sbjct: 90 ctgaccggcaagaccatcacccttgaggtggagcccagtgacaccattgaaaatgtgaag 149 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 150 gccaagatccaggacaaggagggcattcccccagaccagcagaggctgatctttgctggc 209 Query: 160 aagcagttggaagatgggcg 179 |||||| |||| |||||||| Sbjct: 210 aagcagctggaggatgggcg 229 Score = 137 bits (69), Expect = 5e-29 Identities = 122/140 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 318 ctgactggcaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtcaag 377 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || ||||| || |||||||| ||||| || |||||||| Sbjct: 378 gccaagatccaggacaaggaaggtattcctcctgaccagcagaggctgatctttgctggc 437 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 438 aagcagctggaagatgggcg 457 Score = 113 bits (57), Expect = 7e-22 Identities = 140/168 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || || || ||| || ||||||||||| ||||||||| Sbjct: 546 ctgacgggcaagaccatcaccctggaagttgagcccagtgacaccatcgagaacgtcaag 605 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || ||||| ||||| ||||| || |||||||| Sbjct: 606 gccaagatccaggacaaggaaggtatccctccagatcagcagaggctgatctttgctggc 665 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaa 207 |||||| |||| |||||||| || | | || ||||||||||||||| Sbjct: 666 aagcagctggaggatgggcgcaccctgtccgactacaacattcagaaa 713
>gb|BT012698.1| Lycopersicon esculentum clone 113569R, mRNA sequence Length = 1626 Score = 153 bits (77), Expect = 9e-34 Identities = 131/149 (87%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||| Sbjct: 349 gacaccattgacaacgtcaaggctaagatccaggataaggaaggcattcccccagaccag 408 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||| | || ||||| |||||||||||||||||||| || || ||||||| |||||| Sbjct: 409 cagaggttgatctttgcaggaaagcagttggaagatggccgcaccctagctgactacaac 468 Query: 199 attcagaaagagtcgacgctccatttggt 227 || ||||| ||||| || ||||||||||| Sbjct: 469 atccagaaggagtccaccctccatttggt 497 Score = 131 bits (66), Expect = 3e-27 Identities = 170/205 (82%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| || |||||||| || ||||| |||||| ||||||||| ||||| ||||||||| Sbjct: 997 accgggaaaaccatcaccctggaggttgagagctccgacaccattgacaatgtcaaggcc 1056 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||| ||||||||||| ||||||||||||||||| ||| | ||||||||||| ||| Sbjct: 1057 aagatccaagacaaggagggtattcccccagaccagcagaggttgatttttgctggcaag 1116 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || || || || || ||||| || || |||||||| || || Sbjct: 1117 cagctcgaggatggccgcactttggcggactataacatccaaaaggagtcgaccctgcac 1176 Query: 223 ttggtcctgaggctcaggggtggaa 247 ||||| || ||||| ||||| |||| Sbjct: 1177 ttggtgcttaggctgaggggaggaa 1201 Score = 125 bits (63), Expect = 2e-25 Identities = 123/143 (86%) Strand = Plus / Plus Query: 85 atcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccagcaaagg 144 ||||||||||| ||||| ||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 127 atcgacaacgttaaggctaagatccaggataaggaaggaattcccccggatcagcaaagg 186 Query: 145 ctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcag 204 || || || ||||||||||||||||| || || || || |||||||||||||||| ||| Sbjct: 187 cttatcttcgctggaaagcagttggaggacggacgtactctagctgattacaacatccag 246 Query: 205 aaagagtcgacgctccatttggt 227 || ||||| || ||||||||||| Sbjct: 247 aaggagtccaccctccatttggt 269 Score = 97.6 bits (49), Expect = 4e-17 Identities = 147/180 (81%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||||||||| | ||||| || ||| ||||||||| |||||||| ||||| Sbjct: 541 accggaaagaccatcactttggaggtggaaagctccgacaccattgacaacgtgaaggct 600 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||| || || |||||||||||||| ||| | || || ||||||||| Sbjct: 601 aagatccaggataaggaagggatccccccagaccagcagaggttgatcttcgctggaaag 660 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || | ||||| |||||||| ||||| ||||| || |||||| Sbjct: 661 cagctcgaggatggtcgcaccctggctgactacaacatccagaaggagtctaccctccat 720 Score = 79.8 bits (40), Expect = 1e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||||||||| | ||||| || ||| ||||||||| || || || ||||| Sbjct: 769 accggaaagaccatcactttggaggtggaaagctccgacaccattgataatgttaaggct 828 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||||||||||||||| ||||| |||||||||| ||| | ||||| ||||| ||| Sbjct: 829 aagatccaggacaaggagggaattccttcagaccagcagaggttgattttcgctggtaag 888 Query: 163 cag 165 ||| Sbjct: 889 cag 891 Score = 75.8 bits (38), Expect = 2e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||||||||| | ||||| ||||| |||||||||||||| || || | Sbjct: 1223 tgaccgggaagaccatcactttggaggtggagagttctgacaccatcgacaatgtgaaag 1282 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 | ||||| |||||||||||||| || || ||||||||||| ||| | ||||| ||||| | Sbjct: 1283 ctaagattcaggacaaggaggggatcccaccagaccagcagaggttgattttcgctggta 1342 Query: 161 agcag 165 ||||| Sbjct: 1343 agcag 1347
>gb|BC114001.1| Bos taurus polyubiquitin, mRNA (cDNA clone MGC:133799 IMAGE:8064312), complete cds Length = 1093 Score = 153 bits (77), Expect = 9e-34 Identities = 151/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 497 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 556 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 557 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 616 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 617 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 672 Score = 153 bits (77), Expect = 9e-34 Identities = 151/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || ||||||||||| ||||| ||| Sbjct: 269 ctgaccggcaagaccatcacactggaagtggagcccagtgacaccatcgagaacgtgaag 328 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||||||||||||||| |||||||| ||||| || ||||| || Sbjct: 329 gccaagatccaggataaggagggcattccccccgaccagcagaggctcatctttgccggc 388 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 389 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 444 Score = 153 bits (77), Expect = 9e-34 Identities = 151/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 41 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 100 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 101 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 160 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 161 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 216 Score = 145 bits (73), Expect = 2e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || ||||||||||| ||||| ||| Sbjct: 725 ctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgagaacgtgaag 784 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 785 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 844 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 845 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 900
>ref|NM_174133.2| Bos taurus polyubiquitin (LOC281370), mRNA Length = 1144 Score = 153 bits (77), Expect = 9e-34 Identities = 151/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 564 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 623 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 624 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 683 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 684 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 739 Score = 153 bits (77), Expect = 9e-34 Identities = 151/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 108 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 167 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 168 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 227 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 228 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 283 Score = 145 bits (73), Expect = 2e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || ||||||||||| ||||| ||| Sbjct: 792 ctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgagaacgtgaag 851 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 852 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 911 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 912 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 967 Score = 145 bits (73), Expect = 2e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || ||||||||||| ||||| ||| Sbjct: 336 ctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgagaacgtgaag 395 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||||||||||||||| |||||||| ||||| || ||||| || Sbjct: 396 gccaagatccaggataaggagggcattccccccgaccagcagaggctcatctttgccggc 455 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | |||||||||||| |||||||||||||| Sbjct: 456 aagcagctggaagatggccgcactctttttgattacaacatccagaaagagtcgac 511
>emb|Z54175.1|BVDTGACB1 Bovine viral diarrhea virus TGAC-B1 RNA Length = 984 Score = 153 bits (77), Expect = 9e-34 Identities = 151/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 595 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 654 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 655 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 714 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 715 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 770
>emb|Z54176.1|BVDCPA2 Bovine viral diarrhea virus cpA2 RNA Length = 984 Score = 153 bits (77), Expect = 9e-34 Identities = 151/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 595 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 654 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 655 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 714 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 715 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 770
>dbj|AB099083.1| Bos taurus mRNA for similar to polyubiquitin, partial cds, clone: ORCS13778 Length = 567 Score = 153 bits (77), Expect = 9e-34 Identities = 151/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || ||||||||||| ||||| ||| Sbjct: 328 ctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgagaacgtgaag 387 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||||||||||||||| |||||||| ||||| || ||||| || Sbjct: 388 gccaagatccaggataaggagggcattccccccgaccagcagaggctcatctttgccggc 447 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 448 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 503 Score = 153 bits (77), Expect = 9e-34 Identities = 151/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 100 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 159 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 160 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 219 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 220 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 275
>dbj|AB099044.1| Bos taurus mRNA for similar to polyubiquitin, partial cds, clone: ORCS12767 Length = 534 Score = 153 bits (77), Expect = 9e-34 Identities = 151/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 45 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 104 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 105 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 164 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 165 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 220 Score = 145 bits (73), Expect = 2e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || ||||||||||| ||||| ||| Sbjct: 273 ctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgagaacgtgaag 332 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 333 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 392 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 393 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 448
>gb|AF502576.1| Musa acuminata ubiquitin (UBQ2) gene, complete cds Length = 1602 Score = 153 bits (77), Expect = 9e-34 Identities = 169/200 (84%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||||||||| || ||||| |||||| |||||||| ||||| ||||||||| Sbjct: 1165 accgggaagaccatcactctggaggttgagagctcggacaccatagacaatgtcaaggcc 1224 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||||||||| |||||||||||||| ||||||||||| || || ||||| ||| Sbjct: 1225 aagatccaggacaaggaaggcattcccccagatcagcaaaggctcatcttcgctggcaag 1284 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 || ||||| ||||| || || || ||||| || || || ||||| || || || ||||| Sbjct: 1285 caattggaggatggccgtaccttggctgactataatatccagaaggaatctaccctccac 1344 Query: 223 ttggtcctgaggctcagggg 242 ||||| |||||||||||||| Sbjct: 1345 ttggtgctgaggctcagggg 1364 Score = 129 bits (65), Expect = 1e-26 Identities = 112/128 (87%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| || ||||| |||||| |||||||| ||||| ||||||||||||||| Sbjct: 715 aagaccatcactctggaggttgagagctcggacaccatagacaatgtcaaggccaagatc 774 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 ||||||||||| |||||||||||||| ||||||||||| || || ||||| ||||| ||| Sbjct: 775 caggacaaggaaggcattcccccagatcagcaaaggctcatcttcgctggcaagcaattg 834 Query: 169 gaagatgg 176 || ||||| Sbjct: 835 gaggatgg 842 Score = 115 bits (58), Expect = 2e-22 Identities = 102/117 (87%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 |||||||| || || ||||| |||||| |||||||| ||||| ||||||||||||||| Sbjct: 487 aagaccattacccttgaggttgagagctcggacaccatagacaatgtcaaggccaagatc 546 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||||||||| |||||||||||||| ||||||||||| || || ||||| |||||| Sbjct: 547 caggacaaggaaggcattcccccagatcagcaaaggctcatcttcgctggcaagcag 603 Score = 107 bits (54), Expect = 5e-20 Identities = 101/117 (86%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 |||||||| || || ||||| |||||| |||||||| ||||| ||||||||||||||| Sbjct: 943 aagaccattacccttgaggttgagagctcggacaccatagacaatgtcaaggccaagatc 1002 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||||||||||||||||||||| || || |||||||| || || ||||| |||||| Sbjct: 1003 caggacaaggagggcattcccccggatcaacaaaggctcatcttcgctggcaagcag 1059 Score = 101 bits (51), Expect = 3e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| ||||| |||||||||||||||||||||||||| ||||||||||| || ||| Sbjct: 289 gacaccattgacaatgtcaaggccaagatccaggacaaggaaggcattcccccggatcag 348 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 |||||||| || || ||||| || ||| | || ||||| || || || || || ||||| Sbjct: 349 caaaggctcatcttcgctggcaaacagctcgaggatggccgcaccttggccgactacaat 408 Query: 199 attcagaaagagtcgacgctcca 221 || ||||| |||||||| ||||| Sbjct: 409 atccagaaggagtcgaccctcca 431 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| |||||||| ||||| |||||||||||||| |||||||| || ||||| |||||| Sbjct: 61 gacacaatcgacaatgtcaaagccaagatccaggataaggagggaatacccccggaccag 120 Query: 139 caaaggctaatttttgctggaaagca 164 |||||| | || |||||||| ||||| Sbjct: 121 caaaggttgatatttgctggcaagca 146 Score = 79.8 bits (40), Expect = 1e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| || ||||| |||||| ||||| |||||||| || ||||| ||||| Sbjct: 1399 aagaccatcactctggaggttgagagctcggacactatcgacaatgtgaaggcaaagata 1458 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||||||||| || || |||||||| || ||||| || ||||| || |||||| | Sbjct: 1459 caggacaaggagggaatcccaccagaccaacagaggctgatctttgcgggtaagcagctc 1518 Query: 169 gaagatgggcg 179 || |||||||| Sbjct: 1519 gaggatgggcg 1529
>emb|Z18245.1|BTPOLYUB Bos taurus gene for polyubiquitin Length = 1144 Score = 153 bits (77), Expect = 9e-34 Identities = 151/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 564 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 623 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 624 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 683 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 684 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 739 Score = 153 bits (77), Expect = 9e-34 Identities = 151/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 108 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 167 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 168 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 227 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 228 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 283 Score = 145 bits (73), Expect = 2e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || ||||||||||| ||||| ||| Sbjct: 792 ctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgagaacgtgaag 851 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 852 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 911 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 912 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 967 Score = 145 bits (73), Expect = 2e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || ||||||||||| ||||| ||| Sbjct: 336 ctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgagaacgtgaag 395 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||||||||||||||| |||||||| ||||| || ||||| || Sbjct: 396 gccaagatccaggataaggagggcattccccccgaccagcagaggctcatctttgccggc 455 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | |||||||||||| |||||||||||||| Sbjct: 456 aagcagctggaagatggccgcactctttttgattacaacatccagaaagagtcgac 511
>gb|M62429.1|BOVPOUBA Bovine polyubiquitin mRNA, 3' end, clone rpub2 Length = 636 Score = 153 bits (77), Expect = 9e-34 Identities = 151/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 56 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 115 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 116 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 175 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 176 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 231 Score = 145 bits (73), Expect = 2e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || ||||||||||| ||||| ||| Sbjct: 284 ctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgagaacgtgaag 343 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 344 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 403 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 404 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 459
>gb|AF148448.1|AF148448 Sporobolus stapfianus polyubiquitin mRNA, complete cds Length = 1423 Score = 151 bits (76), Expect = 3e-33 Identities = 171/203 (84%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 |||||||||||||||||||| ||||| ||| | ||||||||||||||||| |||||| Sbjct: 318 accggcaagaccatcacgcttgaggtggagtcctcggacaccatcgacaacgtgaaggcc 377 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||||||||||||||||||||| |||||||| | || || || ||||| ||| Sbjct: 378 aagatccaggacaaggagggcattcccccggaccagcagcgtctcatcttcgctgggaag 437 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || || || || || | ||||| |||||||| ||||| ||||| || ||||| Sbjct: 438 cagcttgaggacggccgtacccttgctgactacaacatccagaaggagtccaccctccac 497 Query: 223 ttggtcctgaggctcaggggtgg 245 |||||||||||||||||||||| Sbjct: 498 ctggtcctgaggctcaggggtgg 520 Score = 127 bits (64), Expect = 5e-26 Identities = 168/203 (82%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||||||||| || ||||| ||| | ||||||||||||||||| |||||| Sbjct: 774 accggcaagaccatcacccttgaggtggagtcctcggacaccatcgacaacgtgaaggcc 833 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||||||||||||||| ||||| |||||||| | || || || ||||| ||| Sbjct: 834 aagatccaggacaaggagggcatccccccggaccagcagcgtctcatcttcgctggcaag 893 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || | || || |||||||| ||||| ||||| || ||||| Sbjct: 894 cagcttgaggatggccgcaccctcgccgactacaacatccagaaggagtccaccctccac 953 Query: 223 ttggtcctgaggctcaggggtgg 245 | |||||||||||||||||||| Sbjct: 954 ctcgtcctgaggctcaggggtgg 976 Score = 119 bits (60), Expect = 1e-23 Identities = 167/203 (82%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 |||||||||||||||||||| ||||| ||| | ||||||||||||||||| |||||| Sbjct: 546 accggcaagaccatcacgcttgaggtggagtcctcggacaccatcgacaacgtgaaggcc 605 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||||||||| ||||| || || |||||||| | || || || ||||| ||| Sbjct: 606 aagatccaggacaaggaaggcatccctccggaccagcagcgtctcatcttcgctgggaag 665 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || || || || || | |||||||||||||| ||||| ||||| || ||||| Sbjct: 666 cagcttgaggacggccgtacccttgctgattacaacatccagaaggagtccaccctccac 725 Query: 223 ttggtcctgaggctcaggggtgg 245 | ||||| |||||||||||||| Sbjct: 726 cttgtcctcaggctcaggggtgg 748 Score = 105 bits (53), Expect = 2e-19 Identities = 163/200 (81%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||||||||| |||||||| ||| | || ||||| |||||||||||||| Sbjct: 90 accggcaagaccatcaccctcgaggttgagtcctcggataccattgacaacgtcaaggca 149 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||||||||||||||| || ||||| |||||||| | || || || ||||| ||| Sbjct: 150 aagatccaggacaaggagggaatccccccggaccagcagcgtctcatcttcgctgggaag 209 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || || || || || | |||||||||||||| ||||| ||||| || ||||| Sbjct: 210 cagcttgaggacggccgtacccttgctgattacaacatccagaaggagtccaccctccac 269 Query: 223 ttggtcctgaggctcagggg 242 | ||||| ||||||||||| Sbjct: 270 cttgtcctcaggctcagggg 289 Score = 93.7 bits (47), Expect = 7e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||| || ||||| ||||||||||||||||||||||| || || |||||| Sbjct: 1038 gacaccatcgacaatgttaaggcaaagatccaggacaaggagggcatcccgccggaccag 1097 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || | || || |||||||| |||||| |||| ||||| || || | || ||||||||| Sbjct: 1098 cagcgtctgatctttgctggcaagcagctggaggatggccgcaccctggcggattacaac 1157 Query: 199 attcagaaagagtcgacgctcca 221 || ||||| ||||| || ||||| Sbjct: 1158 atccagaaggagtccaccctcca 1180
>gb|DQ216251.1| Taeniopygia guttata clone 0063P0020H09 ubiquitin C variant 10-like mRNA, complete sequence Length = 716 Score = 149 bits (75), Expect = 1e-32 Identities = 173/206 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || |||||||| || || || ||| Sbjct: 163 ctgactggcaagaccatcacccttgaggtggagcccagtgacaccattgaaaatgtgaag 222 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 223 gccaagatccaggacaaggagggcattcccccagaccagcagaggctgatctttgctggc 282 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||||||||| || || | | || |||||||| ||||||||||| || ||| Sbjct: 283 aagcagctggaagatggccgcaccctctccgactacaacatccagaaagagtcaactctc 342 Query: 220 catttggtcctgaggctcaggggtgg 245 || |||| ||| | ||||||||||| Sbjct: 343 cacctggtgctgcgcctcaggggtgg 368
>gb|S94464.1| polyubiquitin [maize, Genomic, 3841 nt] Length = 3841 Score = 149 bits (75), Expect = 1e-32 Identities = 113/126 (89%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||| ||||| |||||||| ||| ||||||||||||||||||||| Sbjct: 2471 ctgaccggcaagactatcaccctcgaggtggagtcttcagacaccatcgacaacgtcaag 2530 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||| Sbjct: 2531 gccaagatccaggacaaggagggcattcccccagaccagcagcggctcatctttgctgga 2590 Query: 160 aagcag 165 |||||| Sbjct: 2591 aagcag 2596 Score = 125 bits (63), Expect = 2e-25 Identities = 110/126 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||| ||||| |||||||| ||| | |||||||| |||||||||||| Sbjct: 2243 ctgaccggcaagactatcaccctcgaggtggagtcctctgacaccattgacaacgtcaag 2302 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||| || ||||||||||| |||| || |||||||| Sbjct: 2303 gccaagatccaggacaaggagggcatccctccagaccagcagcggctcatctttgctggg 2362 Query: 160 aagcag 165 |||||| Sbjct: 2363 aagcag 2368 Score = 113 bits (57), Expect = 7e-22 Identities = 89/100 (89%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||| |||||||||||||| | ||||| |||||| |||||||| ||||| || |||| Sbjct: 3156 tgactggcaagaccatcaccttggaggtggagagctctgacaccattgacaatgtgaagg 3215 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagca 140 |||||||||||||||||||||||||||||||||||||||| Sbjct: 3216 ccaagatccaggacaaggagggcattcccccagaccagca 3255 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2054 gacaccattgacaacgttaaggccaagatccaggacaaggagggcatccccccagaccag 2113 Query: 139 caaaggctaatttttgctgg 158 || |||| || |||||||| Sbjct: 2114 cagcggctcatctttgctgg 2133 Score = 99.6 bits (50), Expect = 1e-17 Identities = 88/101 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||| ||||| |||||||| ||| |||||||||||||| |||||| Sbjct: 2699 ctgaccggcaagactatcaccctcgaggtggagtcttcagacaccatcgacaatgtcaag 2758 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagca 140 |||||||||||||||||||||||||| || || |||||||| Sbjct: 2759 gccaagatccaggacaaggagggcatcccaccggaccagca 2799 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||| || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 3422 gacaccatcgacaatgtgaaggcgaagatccaggacaaggagggcatccccccggaccag 3481 Query: 139 ca 140 || Sbjct: 3482 ca 3483 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 82 accatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccagca 140 ||||| ||||| |||||||||||||||||||||||||||||||| || || |||||||| Sbjct: 2969 accattgacaatgtcaaggccaagatccaggacaaggagggcatcccacccgaccagca 3027
>gb|DQ216237.1| Taeniopygia guttata clone 0058P0020B09 ubiquitin C variant 1-like mRNA, complete sequence Length = 1346 Score = 147 bits (74), Expect = 5e-32 Identities = 148/173 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || |||||||| || || || ||| Sbjct: 90 ctgactggcaagaccatcacccttgaggtggagcccagtgacaccattgaaaatgtgaag 149 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 150 gccaagatccaggacaaggagggcattcccccagaccagcagaggctgatctttgctggc 209 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| ||||||||||||| || | | || |||||||| ||||||||||| Sbjct: 210 aagcagctggaagatgggcgcaccctctccgactacaacatccagaaagagtc 262 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || || || ||| || ||||||||||| || || ||| Sbjct: 774 ctgactggcaagaccatcaccctggaagttgagcccagtgacaccatcgagaatgtgaag 833 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 834 gccaagatccaggacaaggaaggcattcccccagaccagcagaggctgattttcgctggc 893 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| ||||||||||||| || | | ||||||||||| ||||| ||||| Sbjct: 894 aagcagctggaagatgggcgcaccctgtccgattacaacatccagaaggagtc 946 Score = 129 bits (65), Expect = 1e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||| ||| || ||||||||||| || || ||| Sbjct: 318 ctgaccggcaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtgaag 377 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || || |||||||| ||||| || |||||||| Sbjct: 378 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggc 437 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 438 aagcagctggaagatgggcg 457 Score = 81.8 bits (41), Expect = 3e-12 Identities = 115/140 (82%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || || || ||| || |||||||| || || || ||| Sbjct: 546 ctgactggcaagaccatcaccctggaagttgagcccagtgacaccattgaaaatgtgaag 605 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || || |||||||| ||||| || |||||||| Sbjct: 606 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggt 665 Query: 160 aagcagttggaagatgggcg 179 ||||| |||| |||||||| Sbjct: 666 aagcaactggaggatgggcg 685
>gb|DQ216234.1| Taeniopygia guttata clone 0058P0013A07 ubiquitin C variant 1-like mRNA, complete sequence Length = 1347 Score = 147 bits (74), Expect = 5e-32 Identities = 148/173 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || |||||||| || || || ||| Sbjct: 90 ctgactggcaagaccatcacccttgaggtggagcccagtgacaccattgaaaatgtgaag 149 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 150 gccaagatccaggacaaggagggcattcccccagaccagcagaggctgatctttgctggc 209 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| ||||||||||||| || | | || |||||||| ||||||||||| Sbjct: 210 aagcagctggaagatgggcgcaccctctccgactacaacatccagaaagagtc 262 Score = 129 bits (65), Expect = 1e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||| ||| || ||||||||||| || || ||| Sbjct: 318 ctgaccggcaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtgaag 377 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || || |||||||| ||||| || |||||||| Sbjct: 378 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggc 437 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 438 aagcagctggaagatgggcg 457 Score = 121 bits (61), Expect = 3e-24 Identities = 144/172 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || || || ||| || ||||||||||| || || ||| Sbjct: 774 ctgactggcaagaccatcaccctggaagttgagcccagtgacaccatcgagaatgtgaag 833 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| |||||| ||||||||||||| ||| | ||||| ||||| Sbjct: 834 gccaagatccaggacaaggaaggcatttccccagaccagcagaggttgattttcgctggc 893 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagt 211 |||||| ||||||||||||| || | | ||||||||||| ||||| |||| Sbjct: 894 aagcagctggaagatgggcgcaccctgtccgattacaacatccagaaggagt 945 Score = 81.8 bits (41), Expect = 3e-12 Identities = 115/140 (82%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || || || ||| || |||||||| || || || ||| Sbjct: 546 ctgactggcaagaccatcaccctggaagttgagcccagtgacaccattgaaaatgtgaag 605 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || || |||||||| ||||| || |||||||| Sbjct: 606 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggt 665 Query: 160 aagcagttggaagatgggcg 179 ||||| |||| |||||||| Sbjct: 666 aagcaactggaggatgggcg 685
>gb|DQ216233.1| Taeniopygia guttata clone 0063P0008C04 ubiquitin C variant 1-like mRNA, complete sequence Length = 1305 Score = 147 bits (74), Expect = 5e-32 Identities = 148/173 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || |||||||| || || || ||| Sbjct: 90 ctgactggcaagaccatcacccttgaggtggagcccagtgacaccattgaaaatgtgaag 149 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 150 gccaagatccaggacaaggagggcattcccccagaccagcagaggctgatctttgctggc 209 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| ||||||||||||| || | | || |||||||| ||||||||||| Sbjct: 210 aagcagctggaagatgggcgcaccctctccgactacaacatccagaaagagtc 262 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| || || ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 813 gacaccatcgagaatgtgaaggccaagatccaggacaaggaaggcattcccccagaccag 872 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcg 179 || ||||| ||||| ||||| |||||| ||||||||||||| Sbjct: 873 cagaggctgattttcgctggcaagcagctggaagatgggcg 913 Score = 129 bits (65), Expect = 1e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||| ||| || ||||||||||| || || ||| Sbjct: 318 ctgaccggcaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtgaag 377 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || || |||||||| ||||| || |||||||| Sbjct: 378 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggc 437 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 438 aagcagctggaagatgggcg 457 Score = 81.8 bits (41), Expect = 3e-12 Identities = 115/140 (82%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || || || ||| || |||||||| || || || ||| Sbjct: 546 ctgactggcaagaccatcaccctggaagttgagcccagtgacaccattgaaaatgtgaag 605 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || || |||||||| ||||| || |||||||| Sbjct: 606 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggt 665 Query: 160 aagcagttggaagatgggcg 179 ||||| |||| |||||||| Sbjct: 666 aagcaactggaggatgggcg 685
>gb|DQ216232.1| Taeniopygia guttata clone 0058P0060G06 ubiquitin C variant 1-like mRNA, complete sequence Length = 1306 Score = 147 bits (74), Expect = 5e-32 Identities = 148/173 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || |||||||| || || || ||| Sbjct: 90 ctgactggcaagaccatcacccttgaggtggagcccagtgacaccattgaaaatgtgaag 149 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 150 gccaagatccaggacaaggagggcattcccccagaccagcagaggctgatctttgctggc 209 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| ||||||||||||| || | | || |||||||| ||||||||||| Sbjct: 210 aagcagctggaagatgggcgcaccctctccgactacaacatccagaaagagtc 262 Score = 137 bits (69), Expect = 5e-29 Identities = 122/140 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || || || ||| || ||||||||||| || || ||| Sbjct: 775 ctgactggcaagaccatcaccctggaagttgagcccagtgacaccatcgagaatgtgaag 834 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 835 gccaagatccaggacaaggaaggcattcccccagaccagcagaggctgattttcgctggc 894 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 895 aagcagctggaagatgggcg 914 Score = 129 bits (65), Expect = 1e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||| ||| || ||||||||||| || || ||| Sbjct: 318 ctgaccggcaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtgaag 377 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || || |||||||| ||||| || |||||||| Sbjct: 378 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggc 437 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 438 aagcagctggaagatgggcg 457 Score = 71.9 bits (36), Expect = 3e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || || || ||| || |||||||| || || || ||| Sbjct: 546 ctgactggcaagaccatcaccctggaagttgagcccagtgacaccattgaaaatgtgaag 605 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgg 158 |||||||||||||||||||| || || || || |||||||| ||||| || |||||||| Sbjct: 606 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctgg 664
>emb|AJ879118.2| Capsicum chinense mRNA for polyubiquitin (ubi gene) Length = 969 Score = 147 bits (74), Expect = 5e-32 Identities = 139/161 (86%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 |||||||| || || ||||| |||||| ||||||||||||||| || ||||| || ||| Sbjct: 342 aagaccattaccctggaggttgagagctccgacaccatcgacaatgtgaaggcgaaaatc 401 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 402 caggacaaggagggcattcccccagaccagcagaggcttatttttgcaggaaaacagttg 461 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaaga 209 || |||||||| || | ||||| || ||||| |||||||| Sbjct: 462 gaggatgggcgcacccttgctgactataacatccagaaaga 502 Score = 119 bits (60), Expect = 1e-23 Identities = 113/131 (86%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 |||||||| || || ||||| |||||| ||||||||||||||| ||||| |||||||| Sbjct: 570 aagaccattaccctggaggttgagagctccgacaccatcgacaatgtcaaagccaagatt 629 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||||||||| ||||| ||||||||||| ||| | || |||||||| |||||| || Sbjct: 630 caggacaaggagggaattccaccagaccagcagaggttgatctttgctggtaagcagctg 689 Query: 169 gaagatgggcg 179 || |||||||| Sbjct: 690 gaggatgggcg 700 Score = 117 bits (59), Expect = 5e-23 Identities = 86/95 (90%) Strand = Plus / Plus Query: 82 accatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccagcaa 141 ||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 147 accattgacaacgtcaaggccaagatccaggataaggagggcatccccccagaccagcag 206 Query: 142 aggctaatttttgctggaaagcagttggaagatgg 176 ||||| || ||||| ||||||||| | |||||||| Sbjct: 207 aggcttatctttgccggaaagcagctagaagatgg 241
>gb|U29159.1|ZMU29159 Zea mays clone MubG1 ubiquitin gene, complete cds Length = 4190 Score = 147 bits (74), Expect = 5e-32 Identities = 112/125 (89%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||| ||||| |||||||| ||| |||||||||||||||||||||| Sbjct: 2593 tgaccggcaagactatcaccctcgaggtggagtcttcagacaccatcgacaacgtcaagg 2652 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||||||||||||||||||||||||||||||||| |||| || |||||||||| Sbjct: 2653 ccaagatccaggacaaggagggcattcccccagaccagcagcggctcatctttgctggaa 2712 Query: 161 agcag 165 ||||| Sbjct: 2713 agcag 2717 Score = 113 bits (57), Expect = 7e-22 Identities = 89/100 (89%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||| |||||||||||||| | ||||| |||||| |||||||| ||||| || |||| Sbjct: 3505 tgactggcaagaccatcaccttggaggtggagagctctgacaccattgacaatgtgaagg 3564 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagca 140 |||||||||||||||||||||||||||||||||||||||| Sbjct: 3565 ccaagatccaggacaaggagggcattcccccagaccagca 3604 Score = 111 bits (56), Expect = 3e-21 Identities = 103/119 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||| ||||| |||||||| ||| |||||||| |||||||| ||| Sbjct: 2820 ctgaccggcaagactatcaccctcgaggtggagtcgtctgacaccattgacaacgttaag 2879 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgg 158 |||||||||||||||||||||||||| |||||||||||||| |||| || |||||||| Sbjct: 2880 gccaagatccaggacaaggagggcatccccccagaccagcagcggctcatctttgctgg 2938 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2403 gacaccattgacaacgttaaggccaagatccaggacaaggagggcatccccccagaccag 2462 Query: 139 caaaggctaatttttgctgg 158 || |||| || |||||||| Sbjct: 2463 cagcggctcatctttgctgg 2482 Score = 99.6 bits (50), Expect = 1e-17 Identities = 88/101 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||| ||||| |||||||| ||| |||||||||||||| |||||| Sbjct: 3048 ctgaccggcaagactatcaccctcgaggtggagtcttcagacaccatcgacaatgtcaag 3107 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagca 140 |||||||||||||||||||||||||| || || |||||||| Sbjct: 3108 gccaagatccaggacaaggagggcatcccaccggaccagca 3148 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||| || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 3771 gacaccatcgacaatgtgaaggcgaagatccaggacaaggagggcatccccccggaccag 3830 Query: 139 ca 140 || Sbjct: 3831 ca 3832 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 82 accatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccagca 140 ||||| ||||| |||||||||||||||||||||||||||||||| || || |||||||| Sbjct: 3318 accattgacaatgtcaaggccaagatccaggacaaggagggcatcccacccgaccagca 3376
>gb|U77939.1|PVU77939 Phaseolus vulgaris ubiquitin-like protein mRNA, complete cds Length = 1399 Score = 147 bits (74), Expect = 5e-32 Identities = 121/137 (88%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||||||||| || ||||| |||||| |||||||||||||||||||||||| Sbjct: 380 accggaaagaccatcacccttgaggtggagagctctgacaccatcgacaacgtcaaggcc 439 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||||||||||||||| |||||||| |||||||| ||| | || || ||||||||| Sbjct: 440 aagatccaggacaaggagggaattcccccggaccagcagaggttgatcttcgctggaaag 499 Query: 163 cagttggaagatgggcg 179 ||| |||| |||||||| Sbjct: 500 cagctggaggatgggcg 516 Score = 133 bits (67), Expect = 8e-28 Identities = 117/134 (87%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||||||||| |||||||| |||||| ||||||||||||||||| |||||| Sbjct: 608 accggcaagaccatcaccctcgaggtggagagctctgacaccatcgacaacgtgaaggcc 667 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||||||||||||||| || ||||| |||||||| ||| | || || |||||||| Sbjct: 668 aagatccaggacaaggagggaatacccccggaccagcagaggttgatcttcgctggaaaa 727 Query: 163 cagttggaagatgg 176 ||| |||| ||||| Sbjct: 728 cagctggaggatgg 741 Score = 105 bits (53), Expect = 2e-19 Identities = 136/164 (82%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 |||||||| || || ||||| |||||| |||||||||||||| || ||||| || || Sbjct: 1070 aagaccattacccttgaggtggagagctctgacaccatcgacaatgtgaaggcgaaaatt 1129 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 ||||||||||||||||| || || |||||||| ||| | || ||||| || ||||||||| Sbjct: 1130 caggacaaggagggcatcccaccggaccagcagaggttgatctttgcagggaagcagttg 1189 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||||| |||| | |||||||||||||||||||| ||||| Sbjct: 1190 gaggatggaagaacccttgctgattacaacattcagaaggagtc 1233 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| || ||||| || ||||||||||||||||| |||||||| |||||||| || ||| Sbjct: 872 gacactattgacaatgtgaaggccaagatccaggataaggagggtattcccccggatcag 931 Query: 139 caaaggctaatttttgctggaaagcag 165 || ||| | || || ||||| |||||| Sbjct: 932 cagaggttgatattcgctgggaagcag 958
>gb|DQ216253.1| Taeniopygia guttata clone 0058P0031B03 ubiquitin C variant 14-like mRNA, complete sequence Length = 1327 Score = 145 bits (73), Expect = 2e-31 Identities = 123/140 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || || || ||| || |||||||||||| || |||||| Sbjct: 774 ctgactggcaagaccatcaccctggaagttgagcccagcgacaccatcgagaatgtcaag 833 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 834 gccaagatccaggataaggaaggcattcccccagaccagcagaggctgattttcgctggc 893 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 894 aagcagctggaagatgggcg 913 Score = 131 bits (66), Expect = 3e-27 Identities = 119/137 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || |||||||| || || || ||| Sbjct: 90 ctgactggcaagaccatcacccttgaggtggagcccagtgacaccattgaaaatgtgaag 149 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| || Sbjct: 150 gccaagatccaggacaaggagggcattcccccagaccagcagaggctgatctttgccggt 209 Query: 160 aagcagttggaagatgg 176 |||||| |||||||||| Sbjct: 210 aagcagctggaagatgg 226 Score = 121 bits (61), Expect = 3e-24 Identities = 120/140 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || ||||||||| || || |||||| Sbjct: 546 ctgaccggcaagaccatcaccctggaagttgagcccagcgacaccattgaaaatgtcaag 605 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || || |||||||| ||||| || |||||||| Sbjct: 606 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggc 665 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 666 aagcagctggaagatgggcg 685 Score = 113 bits (57), Expect = 7e-22 Identities = 119/140 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || |||||||| || || || ||| Sbjct: 318 ctgaccggcaagaccatcaccctggaagttgagcccagtgacaccattgaaaatgtgaag 377 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||| || || |||||||| ||||| || |||||||| Sbjct: 378 gccaagatccaggacaaggagggcatccctcctgaccagcagaggctgatctttgctggt 437 Query: 160 aagcagttggaagatgggcg 179 |||||| |||| |||||||| Sbjct: 438 aagcagctggaggatgggcg 457
>gb|DQ216250.1| Taeniopygia guttata clone 0058P0027F01 ubiquitin C variant 9-like mRNA, complete sequence Length = 1074 Score = 145 bits (73), Expect = 2e-31 Identities = 123/140 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || || || ||| || |||||||||||| || |||||| Sbjct: 546 ctgactggcaagaccatcaccctggaagttgagcccagcgacaccatcgagaatgtcaag 605 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 606 gccaagatccaggataaggaaggcattcccccagaccagcagaggctgattttcgctggc 665 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 666 aagcagctggaagatgggcg 685 Score = 131 bits (66), Expect = 3e-27 Identities = 119/137 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || |||||||| || || || ||| Sbjct: 90 ctgactggcaagaccatcacccttgaggtggagcccagtgacaccattgaaaatgtgaag 149 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| || Sbjct: 150 gccaagatccaggacaaggagggcattcccccagaccagcagaggctgatctttgccggt 209 Query: 160 aagcagttggaagatgg 176 |||||| |||||||||| Sbjct: 210 aagcagctggaagatgg 226 Score = 105 bits (53), Expect = 2e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| || || || ||||||||||||||||||||||||||||| || || |||||| Sbjct: 357 gacaccattgaaaatgtgaaggccaagatccaggacaaggagggcatccctcctgaccag 416 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcg 179 || ||||| || |||||||| |||||| ||||||||||||| Sbjct: 417 cagaggctgatctttgctggtaagcagctggaagatgggcg 457
>gb|DQ216249.1| Taeniopygia guttata clone 0058P0031D03 ubiquitin C variant 9-like mRNA, complete sequence Length = 1327 Score = 145 bits (73), Expect = 2e-31 Identities = 123/140 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || || || ||| || |||||||||||| || |||||| Sbjct: 774 ctgactggcaagaccatcaccctggaagttgagcccagcgacaccatcgagaatgtcaag 833 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 834 gccaagatccaggataaggaaggcattcccccagaccagcagaggctgattttcgctggc 893 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 894 aagcagctggaagatgggcg 913 Score = 131 bits (66), Expect = 3e-27 Identities = 119/137 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || |||||||| || || || ||| Sbjct: 90 ctgactggcaagaccatcacccttgaggtggagcccagtgacaccattgaaaatgtgaag 149 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| || Sbjct: 150 gccaagatccaggacaaggagggcattcccccagaccagcagaggctgatctttgccggt 209 Query: 160 aagcagttggaagatgg 176 |||||| |||||||||| Sbjct: 210 aagcagctggaagatgg 226 Score = 125 bits (63), Expect = 2e-25 Identities = 170/206 (82%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || ||||||||| || || |||||| Sbjct: 546 ctgaccggcaagaccatcaccctggaagttgagcccagcgacaccattgaaaatgtcaag 605 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || || |||||||| ||||| || |||||||| Sbjct: 606 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggc 665 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| ||||||||||||| || | | || |||||||| |||||||| || || || Sbjct: 666 aagcagctggaagatgggcgcaccctctcagactacaacatccagaaagaatccaccctg 725 Query: 220 catttggtcctgaggctcaggggtgg 245 ||| |||| ||| | ||||||||||| Sbjct: 726 catctggtgctgcgcctcaggggtgg 751 Score = 113 bits (57), Expect = 7e-22 Identities = 119/140 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || |||||||| || || || ||| Sbjct: 318 ctgaccggcaagaccatcaccctggaagttgagcccagtgacaccattgaaaatgtgaag 377 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||| || || |||||||| ||||| || |||||||| Sbjct: 378 gccaagatccaggacaaggagggcatccctcctgaccagcagaggctgatctttgctggt 437 Query: 160 aagcagttggaagatgggcg 179 |||||| |||| |||||||| Sbjct: 438 aagcagctggaggatgggcg 457
>gb|DQ216246.1| Taeniopygia guttata clone 0058P0016A01 ubiquitin C variant 7-like mRNA, complete sequence Length = 1377 Score = 145 bits (73), Expect = 2e-31 Identities = 123/140 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || || || ||| || |||||||||||| || |||||| Sbjct: 1002 ctgactggcaagaccatcaccctggaagttgagcccagcgacaccatcgagaatgtcaag 1061 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 1062 gccaagatccaggataaggaaggcattcccccagaccagcagaggctgattttcgctggc 1121 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 1122 aagcagctggaagatgggcg 1141 Score = 131 bits (66), Expect = 3e-27 Identities = 119/137 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || |||||||| || || || ||| Sbjct: 90 ctgactggcaagaccatcacccttgaggtggagcccagtgacaccattgaaaatgtgaag 149 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| || Sbjct: 150 gccaagatccaggacaaggagggcattcccccagaccagcagaggctgatctttgccggt 209 Query: 160 aagcagttggaagatgg 176 |||||| |||||||||| Sbjct: 210 aagcagctggaagatgg 226 Score = 125 bits (63), Expect = 2e-25 Identities = 170/206 (82%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || |||||||| || || |||||| Sbjct: 774 ctgaccggcaagaccatcactcttgaggtggagcccagtgacaccattgaaaatgtcaag 833 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || || |||||||| ||||| || || ||||| Sbjct: 834 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatcttcgctggc 893 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| ||||||||||||| || | |||| |||||||| |||||||| || || || Sbjct: 894 aagcagctggaagatgggcgcaccctctctgactacaacatccagaaagaatccaccctg 953 Query: 220 catttggtcctgaggctcaggggtgg 245 ||| |||| ||| | ||||||||||| Sbjct: 954 catctggtgctgcgcctcaggggtgg 979 Score = 121 bits (61), Expect = 3e-24 Identities = 120/140 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || ||||||||| || || |||||| Sbjct: 546 ctgaccggcaagaccatcaccctggaagttgagcccagcgacaccattgaaaatgtcaag 605 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || || |||||||| ||||| || |||||||| Sbjct: 606 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggc 665 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 666 aagcagctggaagatgggcg 685 Score = 113 bits (57), Expect = 7e-22 Identities = 119/140 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || |||||||| || || || ||| Sbjct: 318 ctgaccggcaagaccatcaccctggaagttgagcccagtgacaccattgaaaatgtgaag 377 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||| || || |||||||| ||||| || |||||||| Sbjct: 378 gccaagatccaggacaaggagggcatccctcctgaccagcagaggctgatctttgctggt 437 Query: 160 aagcagttggaagatgggcg 179 |||||| |||| |||||||| Sbjct: 438 aagcagctggaggatgggcg 457
>ref|XM_586525.2| PREDICTED: Bos taurus polyubiquitin, transcript variant 1 (UBC), mRNA Length = 2416 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 999 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1058 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1059 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1118 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1119 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1170 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 315 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 374 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 375 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 434 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 435 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 486 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2139 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2198 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2199 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2258 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2259 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2318 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2319 acttggtcctg 2329 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1911 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1970 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1971 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2030 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2031 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2082 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1683 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1742 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1743 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1802 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1803 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1854 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1455 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1514 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1515 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1574 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 1575 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 1626 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1227 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1286 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1287 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1346 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1347 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1398 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 543 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 602 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 603 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 662 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 663 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 714 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 771 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 830 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 831 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 890 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 891 aacagctggaagatgg 906 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 245 atccagaaagagtc 258
>ref|XM_874972.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 17 (UBC), mRNA Length = 2588 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1399 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1458 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1459 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1518 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1519 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1570 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 715 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 774 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 775 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 834 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 835 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 886 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 259 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 318 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 319 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 378 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 379 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 430 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2311 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2370 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2371 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2430 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2431 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2490 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2491 acttggtcctg 2501 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2083 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 2142 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2143 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2202 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2203 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2254 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1855 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1914 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1915 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1974 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1975 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2026 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1627 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1686 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1687 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1746 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 1747 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 1798 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1171 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1230 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1231 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1290 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1291 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1342 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 943 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1002 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1003 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1062 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1063 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1114 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 487 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 546 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 547 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 606 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 607 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 658 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 69 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 128 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 129 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 188 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 189 atccagaaagagtc 202
>ref|XM_874894.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 16 (UBC), mRNA Length = 2416 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 999 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1058 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1059 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1118 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1119 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1170 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 315 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 374 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 375 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 434 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 435 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 486 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2139 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2198 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2199 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2258 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2259 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2318 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2319 acttggtcctg 2329 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1911 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1970 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1971 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2030 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2031 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2082 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1683 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1742 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1743 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1802 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1803 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1854 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1455 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1514 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1515 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1574 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1575 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1626 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1227 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1286 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1287 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1346 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1347 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1398 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 543 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 602 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 603 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 662 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 663 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 714 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 771 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 830 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 831 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 890 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 891 aacagctggaagatgg 906 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 245 atccagaaagagtc 258
>ref|XM_875774.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 27 (UBC), mRNA Length = 2458 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1269 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1328 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1329 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1388 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1389 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1440 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 585 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 644 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 645 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 704 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 705 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 756 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2181 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2240 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2241 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2300 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2301 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2360 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2361 acttggtcctg 2371 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1953 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 2012 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2013 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2072 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2073 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2124 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1725 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1784 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1785 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1844 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1845 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1896 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1497 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1556 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1557 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1616 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 1617 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 1668 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1041 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1100 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1101 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1160 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1161 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1212 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 813 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 872 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 873 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 932 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 933 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 984 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 129 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 188 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 189 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 248 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 249 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 300 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 357 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 416 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 417 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 476 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 477 aacagctggaagatgg 492
>ref|XM_874811.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 15 (UBC), mRNA Length = 2416 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 999 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1058 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1059 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1118 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1119 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1170 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 315 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 374 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 375 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 434 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 435 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 486 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2139 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2198 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2199 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2258 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2259 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2318 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2319 acttggtcctg 2329 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1911 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1970 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1971 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2030 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2031 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2082 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1683 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1742 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1743 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1802 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1803 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1854 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1455 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1514 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1515 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1574 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 1575 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 1626 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1227 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1286 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1287 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1346 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1347 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1398 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 543 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 602 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 603 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 662 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 663 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 714 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 771 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 830 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 831 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 890 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 891 aacagctggaagatgg 906 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 245 atccagaaagagtc 258
>ref|XM_874725.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 14 (UBC), mRNA Length = 2644 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1683 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1742 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1743 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1802 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1803 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1854 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 999 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1058 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1059 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1118 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1119 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1170 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 315 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 374 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 375 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 434 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 435 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 486 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2367 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2426 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2427 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2486 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2487 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2546 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2547 acttggtcctg 2557 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2139 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 2198 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2199 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2258 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2259 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2310 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1911 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1970 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1971 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2030 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2031 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2082 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1455 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1514 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1515 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1574 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1575 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1626 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1227 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1286 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1287 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1346 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1347 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1398 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 543 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 602 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 603 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 662 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 663 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 714 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 771 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 830 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 831 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 890 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 891 aacagctggaagatgg 906 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 245 atccagaaagagtc 258
>ref|XM_874640.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 13 (UBC), mRNA Length = 2644 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1455 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1514 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1515 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1574 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1575 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1626 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 999 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1058 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1059 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1118 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1119 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1170 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 315 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 374 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 375 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 434 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 435 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 486 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2367 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2426 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2427 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2486 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2487 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2546 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2547 acttggtcctg 2557 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2139 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 2198 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2199 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2258 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2259 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2310 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1911 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1970 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1971 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2030 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2031 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2082 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1683 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1742 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1743 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1802 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 1803 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 1854 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1227 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1286 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1287 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1346 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1347 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1398 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 543 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 602 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 603 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 662 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 663 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 714 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 771 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 830 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 831 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 890 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 891 aacagctggaagatgg 906 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 245 atccagaaagagtc 258
>ref|XM_875701.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 26 (UBC), mRNA Length = 2580 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1391 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1450 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1451 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1510 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1511 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1562 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 707 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 766 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 767 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 826 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 827 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 878 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2303 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2362 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2363 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2422 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2423 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2482 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2483 acttggtcctg 2493 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2075 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 2134 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2135 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2194 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2195 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2246 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1847 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1906 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1907 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1966 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1967 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2018 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1619 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1678 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1679 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1738 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 1739 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 1790 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1163 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1222 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1223 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1282 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1283 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1334 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 935 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 994 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 995 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1054 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1055 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1106 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 251 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 310 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 311 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 370 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 371 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 422 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 479 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 538 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 539 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 598 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 599 aacagctggaagatgg 614 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 61 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 120 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 121 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 180 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 181 atccagaaagagtc 194
>ref|XM_875631.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 25 (UBC), mRNA Length = 2644 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1455 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1514 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1515 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1574 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1575 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1626 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 999 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1058 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1059 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1118 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1119 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1170 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 315 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 374 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 375 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 434 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 435 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 486 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2367 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2426 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2427 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2486 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2487 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2546 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2547 acttggtcctg 2557 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2139 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 2198 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2199 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2258 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2259 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2310 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1911 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1970 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1971 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2030 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2031 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2082 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1683 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1742 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1743 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1802 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 1803 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 1854 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1227 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1286 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1287 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1346 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1347 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1398 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 543 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 602 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 603 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 662 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 663 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 714 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 771 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 830 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 831 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 890 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 891 aacagctggaagatgg 906 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 245 atccagaaagagtc 258
>ref|XM_875556.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 24 (UBC), mRNA Length = 2580 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1391 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1450 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1451 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1510 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1511 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1562 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 707 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 766 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 767 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 826 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 827 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 878 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 251 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 310 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 311 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 370 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 371 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 422 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2303 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2362 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2363 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2422 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2423 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2482 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2483 acttggtcctg 2493 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2075 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 2134 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2135 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2194 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2195 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2246 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1847 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1906 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1907 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1966 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1967 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2018 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1619 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1678 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1679 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1738 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 1739 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 1790 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1163 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1222 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1223 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1282 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1283 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1334 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 935 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 994 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 995 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1054 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1055 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1106 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 479 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 538 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 539 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 598 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 599 aacagctggaagatgg 614 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 61 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 120 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 121 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 180 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 181 atccagaaagagtc 194
>ref|XM_875261.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 20 (UBC), mRNA Length = 2643 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1683 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1742 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1743 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1802 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1803 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1854 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 999 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1058 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1059 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1118 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1119 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1170 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 315 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 374 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 375 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 434 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 435 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 486 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2367 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2426 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2427 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2486 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2487 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2546 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2547 acttggtcctg 2557 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2139 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 2198 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2199 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2258 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2259 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2310 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1911 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1970 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1971 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2030 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 2031 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 2082 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1455 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1514 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1515 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1574 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1575 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1626 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1227 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1286 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1287 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1346 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1347 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1398 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 543 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 602 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 603 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 662 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 663 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 714 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 771 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 830 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 831 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 890 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 891 aacagctggaagatgg 906 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 245 atccagaaagagtc 258
>ref|XM_875198.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 19 (UBC), mRNA Length = 2588 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1399 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1458 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1459 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1518 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1519 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1570 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 715 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 774 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 775 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 834 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 835 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 886 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 259 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 318 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 319 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 378 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 379 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 430 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2311 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2370 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2371 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2430 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2431 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2490 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2491 acttggtcctg 2501 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2083 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 2142 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2143 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2202 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2203 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2254 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1855 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1914 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1915 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1974 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1975 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2026 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1627 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1686 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1687 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1746 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 1747 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 1798 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1171 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1230 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1231 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1290 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1291 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1342 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 943 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1002 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1003 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1062 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1063 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1114 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 487 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 546 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 547 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 606 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 607 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 658 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 69 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 128 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 129 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 188 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 189 atccagaaagagtc 202
>ref|XM_875130.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 18 (UBC), mRNA Length = 2825 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1683 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1742 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1743 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1802 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1803 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1854 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 999 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1058 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1059 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1118 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1119 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1170 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 315 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 374 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 375 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 434 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 435 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 486 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2551 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2610 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2611 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2670 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2671 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2730 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2731 acttggtcctg 2741 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2323 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 2382 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2383 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2442 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2443 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2494 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1911 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1970 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1971 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2030 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 2031 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 2082 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1455 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1514 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1515 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1574 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1575 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1626 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1227 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1286 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1287 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1346 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1347 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1398 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 543 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 602 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 603 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 662 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 663 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 714 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 771 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 830 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 831 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 890 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 891 aacagctggaagatgg 906 Score = 119 bits (60), Expect = 1e-23 Identities = 101/115 (87%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2139 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2198 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgc 155 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| Sbjct: 2199 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgc 2253 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 245 atccagaaagagtc 258
>ref|XM_875488.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 23 (UBC), mRNA Length = 2644 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1455 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1514 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1515 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1574 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1575 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1626 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 999 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1058 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1059 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1118 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1119 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1170 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 315 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 374 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 375 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 434 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 435 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 486 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2367 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2426 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2427 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2486 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2487 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2546 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2547 acttggtcctg 2557 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2139 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 2198 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2199 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2258 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2259 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2310 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1911 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1970 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1971 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2030 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2031 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2082 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1683 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1742 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1743 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1802 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 1803 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 1854 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1227 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1286 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1287 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1346 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1347 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1398 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 543 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 602 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 603 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 662 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 663 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 714 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 771 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 830 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 831 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 890 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 891 aacagctggaagatgg 906 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 245 atccagaaagagtc 258
>ref|XM_875413.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 22 (UBC), mRNA Length = 2644 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1683 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1742 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1743 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1802 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1803 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1854 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 999 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1058 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1059 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1118 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1119 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1170 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 315 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 374 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 375 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 434 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 435 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 486 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2367 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2426 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2427 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2486 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2487 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2546 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2547 acttggtcctg 2557 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2139 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 2198 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2199 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2258 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2259 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2310 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1911 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1970 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1971 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2030 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2031 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2082 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1455 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1514 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1515 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1574 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1575 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1626 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1227 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1286 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1287 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1346 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1347 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1398 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 543 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 602 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 603 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 662 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 663 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 714 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 771 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 830 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 831 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 890 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 891 aacagctggaagatgg 906 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 245 atccagaaagagtc 258
>ref|XM_875335.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 21 (UBC), mRNA Length = 2659 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1470 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1529 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1530 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1589 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1590 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1641 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 315 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 374 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 375 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 434 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 435 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 486 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2382 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2441 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2442 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2501 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2502 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2561 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2562 acttggtcctg 2572 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2154 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 2213 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2214 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2273 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2274 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2325 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1926 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1985 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1986 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2045 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2046 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2097 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1698 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1757 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1758 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1817 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 1818 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 1869 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1242 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1301 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1302 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1361 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1362 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1413 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 543 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 602 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 603 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 662 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 663 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 714 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 771 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 830 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 831 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 890 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 891 aacagctggaagatgg 906 Score = 119 bits (60), Expect = 1e-23 Identities = 137/163 (84%) Strand = Plus / Plus Query: 50 agaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatcc 109 |||||||||| || ||||| ||| || ||||||||||| ||||||||||||||||||| Sbjct: 1023 agaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaagatcc 1082 Query: 110 aggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttgg 169 | ||||| |||||||| |||||||||||||| ||||| || ||||| || || ||| ||| Sbjct: 1083 aagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctgg 1142 Query: 170 aagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1143 aagatggccgcaccctgtctgactacaacatccagaaagagtc 1185 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 245 atccagaaagagtc 258
>ref|XM_874550.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 12 (UBC), mRNA Length = 2188 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 999 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1058 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1059 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1118 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1119 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1170 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 315 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 374 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 375 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 434 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 435 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 486 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1911 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1970 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1971 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2030 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2031 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2090 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2091 acttggtcctg 2101 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1683 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1742 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1743 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1802 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1803 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1854 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1455 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1514 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1515 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1574 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1575 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1626 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1227 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1286 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1287 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1346 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1347 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1398 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 543 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 602 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 603 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 662 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 663 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 714 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 771 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 830 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 831 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 890 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 891 aacagctggaagatgg 906 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 245 atccagaaagagtc 258
>ref|XM_874473.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 11 (UBC), mRNA Length = 2415 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1683 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1742 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1743 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1802 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1803 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1854 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 999 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1058 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1059 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1118 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1119 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1170 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 315 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 374 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 375 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 434 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 435 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 486 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2139 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2198 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2199 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2258 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2259 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2318 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2319 acttggtcctg 2329 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1911 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1970 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1971 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2030 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2031 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2082 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1455 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1514 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1515 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1574 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1575 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1626 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1227 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1286 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1287 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1346 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1347 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1398 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 543 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 602 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 603 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 662 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 663 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 714 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 771 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 830 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 831 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 890 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 891 aacagctggaagatgg 906 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 245 atccagaaagagtc 258
>ref|XM_874390.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 10 (UBC), mRNA Length = 2415 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1683 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1742 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1743 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1802 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1803 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1854 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 999 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1058 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1059 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1118 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1119 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1170 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 315 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 374 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 375 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 434 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 435 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 486 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2139 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2198 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2199 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2258 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2259 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2318 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2319 acttggtcctg 2329 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1911 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1970 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1971 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2030 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2031 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2082 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1455 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1514 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1515 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1574 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1575 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1626 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1227 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1286 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1287 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1346 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1347 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1398 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 543 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 602 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 603 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 662 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 663 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 714 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 771 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 830 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 831 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 890 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 891 aacagctggaagatgg 906 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 245 atccagaaagagtc 258
>ref|XM_874317.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 9 (UBC), mRNA Length = 2416 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 999 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1058 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1059 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1118 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1119 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1170 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 315 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 374 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 375 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 434 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 435 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 486 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2139 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2198 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2199 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2258 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2259 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2318 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2319 acttggtcctg 2329 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1911 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1970 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1971 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2030 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2031 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2082 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1683 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1742 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1743 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1802 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1803 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1854 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1455 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1514 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1515 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1574 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1575 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1626 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1227 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1286 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1287 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1346 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1347 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1398 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 543 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 602 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 603 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 662 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 663 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 714 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 771 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 830 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 831 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 890 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 891 aacagctggaagatgg 906 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 245 atccagaaagagtc 258
>ref|XM_874230.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 8 (UBC), mRNA Length = 2613 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1424 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1483 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1484 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1543 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1544 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1595 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2336 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2395 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2396 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2455 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2456 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2515 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2516 acttggtcctg 2526 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2108 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 2167 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2168 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2227 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2228 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2279 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1880 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1939 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1940 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1999 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2000 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2051 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1652 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1711 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1712 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1771 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 1772 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 1823 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1196 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1255 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1256 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1315 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1316 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1367 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 404 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 463 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 464 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 523 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 524 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 575 Score = 135 bits (68), Expect = 2e-28 Identities = 121/139 (87%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 860 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 919 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 920 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 979 Query: 161 agcagttggaagatgggcg 179 | ||| ||||||||||||| Sbjct: 980 aacagctggaagatgggcg 998 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 632 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 691 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 692 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 751 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 752 aacagctggaagatgg 767 Score = 123 bits (62), Expect = 8e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 214 gacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagaccag 273 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| ||||||||||||| || | |||| |||||| Sbjct: 274 cagaggctgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaac 333 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 334 atccagaaagagtc 347 Score = 115 bits (58), Expect = 2e-22 Identities = 115/134 (85%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 1006 gacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagaccag 1065 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 1066 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 1125 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 1126 atccagaaagagtc 1139 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 61 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 120 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 121 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 180 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 181 atccagaaagagtc 194
>ref|XM_874142.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 7 (UBC), mRNA Length = 2172 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 943 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1002 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1003 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1062 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1063 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1114 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 259 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 318 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 319 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 378 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 379 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 430 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1855 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1914 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1915 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1974 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 1975 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2034 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2035 acttggtcctg 2045 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1627 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1686 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1687 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1746 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1747 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1798 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1399 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1458 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1459 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1518 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1519 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1570 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1171 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1230 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1231 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1290 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 1291 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 1342 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 715 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 774 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 775 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 834 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 835 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 886 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 487 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 546 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 547 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 606 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 607 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 658 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 69 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 128 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 129 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 188 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 189 atccagaaagagtc 202
>ref|XM_874048.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 6 (UBC), mRNA Length = 1904 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 715 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 774 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 775 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 834 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 835 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 886 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 259 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 318 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 319 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 378 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 379 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 430 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1627 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1686 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1687 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1746 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 1747 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 1806 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 1807 acttggtcctg 1817 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1399 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1458 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1459 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1518 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1519 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1570 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1171 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1230 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1231 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1290 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1291 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1342 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 943 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1002 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1003 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1062 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 1063 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 1114 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 487 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 546 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 547 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 606 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 607 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 658 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 69 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 128 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 129 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 188 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 189 atccagaaagagtc 202
>ref|XM_873963.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 5 (UBC), mRNA Length = 1883 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1456 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1515 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1516 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1575 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1576 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1627 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 999 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1058 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1059 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1118 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1119 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1170 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 315 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 374 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 375 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 434 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 435 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 486 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1684 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1743 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1744 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1803 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 1804 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 1855 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 543 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 602 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 603 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 662 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 663 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 714 Score = 131 bits (66), Expect = 3e-27 Identities = 143/169 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1227 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1286 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1287 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1346 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaaga 209 | ||| |||||||||| || || | |||| |||||||| |||||||| Sbjct: 1347 aacagctggaagatggccgcaccctgtctgactacaacatccagaaaga 1395 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 771 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 830 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 831 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 890 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 891 aacagctggaagatgg 906 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 245 atccagaaagagtc 258
>ref|XM_873860.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 4 (UBC), mRNA Length = 1546 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 357 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 416 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 417 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 476 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 477 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 528 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1269 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1328 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1329 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1388 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 1389 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 1448 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 1449 acttggtcctg 1459 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1041 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1100 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1101 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1160 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1161 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1212 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 813 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 872 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 873 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 932 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 933 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 984 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 585 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 644 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 645 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 704 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 705 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 756 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 31 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 90 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 91 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 150 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 151 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 202
>ref|XM_864638.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 3 (UBC), mRNA Length = 2872 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1683 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 1742 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1743 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1802 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1803 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1854 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 999 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1058 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1059 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1118 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1119 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1170 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 315 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 374 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 375 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 434 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 435 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 486 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2595 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2654 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2655 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2714 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 2715 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 2774 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 2775 acttggtcctg 2785 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2367 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 2426 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2427 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2486 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2487 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2538 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 2139 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 2198 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 2199 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2258 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2259 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 2310 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1911 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1970 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1971 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 2030 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 2031 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 2082 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1455 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1514 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1515 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1574 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1575 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1626 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1227 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1286 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1287 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1346 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1347 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1398 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 543 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 602 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 603 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 662 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 663 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 714 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 771 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 830 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 831 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 890 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 891 aacagctggaagatgg 906 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| |||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 125 gacaccatcgagaacgtcaaggggaagatacaagaaaaagaaggcatccccccagaccag 184 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 185 cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac 244 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 245 atccagaaagagtc 258
>gb|BT012724.1| Lycopersicon esculentum clone 113652F, mRNA sequence Length = 1579 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| ||||| || || |||||||||||||||||||| |||||||||||||||||| Sbjct: 110 gacaccattgacaatgttaaagccaagatccaggacaaggaaggcattcccccagaccag 169 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||||| || ||||| ||||||||| | ||||| || || || |||||||||||||| Sbjct: 170 cagaggctgatctttgcaggaaagcagcttgaagacggtcgtactctagctgattacaac 229 Query: 199 attcagaaagagtcgacgctccatttggt 227 |||||||||||||| || ||||| ||||| Sbjct: 230 attcagaaagagtcaactctccacttggt 258 Score = 141 bits (71), Expect = 3e-30 Identities = 142/166 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||| |||||||| || || || ||||| || ||| ||||||||| |||||||| |||| Sbjct: 984 tgactggcaagactattacccttgaggtggaaagctccgacaccattgacaacgtaaagg 1043 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||| |||||||| ||||| || || ||||||||||||||| | ||||||||||| | Sbjct: 1044 ccaagattcaggacaaagagggtatcccaccagaccagcaaaggttgatttttgctggca 1103 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaa 206 |||||||||||||||| | |||||||| |||||||| |||||||| Sbjct: 1104 agcagttggaagatggaaggacattagccgattacaatattcagaa 1149 Score = 101 bits (51), Expect = 3e-18 Identities = 149/182 (81%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| || ||||| || ||| ||||||||| ||||| || ||||| |||||| Sbjct: 536 aagaccatcacccttgaggttgaaagctccgacaccattgacaatgttaaggctaagatc 595 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 || |||||||| |||||||||||||||||||||||| | || ||||| || |||||| | Sbjct: 596 caagacaaggaaggcattcccccagaccagcaaaggttgatctttgcgggcaagcagctt 655 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggtc 228 || || || | || | |||||||||||||| ||||| ||||| || || || |||||| Sbjct: 656 gaggacggcaggacccttgctgattacaacatccagaaggagtcaacccttcacttggtc 715 Query: 229 ct 230 || Sbjct: 716 ct 717 Score = 91.7 bits (46), Expect = 3e-15 Identities = 99/117 (84%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| || ||||| || ||| |||||||| ||||| || ||||| |||||| Sbjct: 308 aagaccatcacccttgaggttgaaagctctgacaccattgacaatgttaaggctaagatc 367 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 || |||||||| |||||||||||||||||||||||| | || ||||| || |||||| Sbjct: 368 caagacaaggaaggcattcccccagaccagcaaaggttgatctttgcgggcaagcag 424 Score = 65.9 bits (33), Expect = 2e-07 Identities = 123/153 (80%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| ||||| || |||||||| || |||||||| || || ||||| ||||||||| Sbjct: 794 gacaccattgacaatgttaaggccaaaattcaggacaaagaaggtattccaccagaccag 853 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||| | || ||||| |||||||| | || || || || || | |||||||||||| Sbjct: 854 cagaggttgatctttgccggaaagcaacttgaggacggccgtacccttgctgattacaac 913 Query: 199 attcagaaagagtcgacgctccatttggtcctg 231 || ||||| ||||| || || || ||||||||| Sbjct: 914 atccagaaggagtcaacccttcacttggtcctg 946
>gb|DQ122773.1| Medicago sativa clone MH5 pentameric polyubiquitin mRNA, partial cds Length = 571 Score = 145 bits (73), Expect = 2e-31 Identities = 141/164 (85%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||||||||| || ||||| || || |||||||| ||||| ||||||||| Sbjct: 321 accggcaagaccatcacccttgaggtggaaagttctgacaccattgacaatgtcaaggcc 380 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||||||||| || || ||||||||||||||||| ||||| || || ||||||||| Sbjct: 381 aagatccaggacaaagaaggaattcccccagaccagcagaggcttatcttcgctggaaag 440 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaa 206 ||||||||||| || | || |||||||||||||||||||||| Sbjct: 441 cagttggaagacggaaggaccctagctgattacaacattcagaa 484 Score = 83.8 bits (42), Expect = 7e-13 Identities = 98/117 (83%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||| ||||| || ||||| || ||| |||||||||||||||||| || ||||||||| Sbjct: 99 aagactatcacccttgaggttgaaagctccgacaccatcgacaacgtgaaagccaagatc 158 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||||||||| || ||||| || |||||||| ||| | || || || ||||||||| Sbjct: 159 caggacaaggaaggtattcctccggaccagcagaggttgatcttcgccggaaagcag 215
>ref|NR_002856.1| Mus musculus ubiquitin pseudogene (LOC218963) on chromosome 3 Length = 975 Score = 145 bits (73), Expect = 2e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 139 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 198 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 199 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 258 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 259 aagcagctggaagatggccgcactctctctgattacaacatccagaaagagtcgac 314
>dbj|AB098769.1| Bos taurus mRNA for similar to polyubiquitin, partial cds, clone: ORCS11653 Length = 486 Score = 145 bits (73), Expect = 2e-31 Identities = 150/176 (85%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || ||||||||||| ||||| ||| Sbjct: 352 ctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgagaacgtgaag 293 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 292 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 233 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 232 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 177 Score = 60.0 bits (30), Expect = 1e-05 Identities = 69/82 (84%) Strand = Plus / Minus Query: 134 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 193 ||||||| ||||| || ||||| || |||||| |||||||||| || || | |||||| Sbjct: 486 accagcagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgatt 427 Query: 194 acaacattcagaaagagtcgac 215 ||||||| |||||||||||||| Sbjct: 426 acaacatccagaaagagtcgac 405
>gb|M62431.1|BVDCP1 Bovine viral diarrhea virus CP1 putative helcase/protease mRNA, partial cds Length = 5688 Score = 145 bits (73), Expect = 2e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || ||||||||||| ||||| ||| Sbjct: 2989 ctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgagaacgtgaag 3048 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 3049 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 3108 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 3109 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 3164 Score = 87.7 bits (44), Expect = 4e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 108 ccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagtt 167 |||||| ||||| ||||||||||| |||||||| ||||| || ||||| || |||||| | Sbjct: 2829 ccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagct 2888 Query: 168 ggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 ||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 2889 ggaagatggccgcactctttctgattacaacatccagaaagagtcgac 2936
>gb|M62428.1|BOVPOUB Bovine polyubiquitin mRNA, 3' end, clone rpub1 Length = 789 Score = 145 bits (73), Expect = 2e-31 Identities = 147/172 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 56 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 115 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| |||||||| ||||| || | Sbjct: 116 ccaagatccaagacaaagagggcatccccccagaccagcagaggctaatctttgccggga 175 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| ||||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 176 aacagctggaagatgggcgcaccctgtctgactacaacatccagaaggagtc 227 Score = 143 bits (72), Expect = 8e-31 Identities = 161/191 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 512 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 571 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 572 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 631 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 | ||| |||||||||| || || | |||| |||||||| ||||||||||| || || | Sbjct: 632 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgc 691 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 692 acttggtcctg 702 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 284 tgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaagg 343 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 344 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 403 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 404 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 455
>ref|XM_415105.1| PREDICTED: Gallus gallus ubiquitin (LOC396190), mRNA Length = 1349 Score = 143 bits (72), Expect = 8e-31 Identities = 122/139 (87%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||| |||||||||||||| || ||||||||| || |||||||| || ||||| |||| Sbjct: 761 tgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgagaacgtgaagg 820 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||||||||||||||| || ||||| ||||| || |||||||| | Sbjct: 821 ccaagatccaggacaaggagggcattccccccgatcagcagaggctgatctttgctggca 880 Query: 161 agcagttggaagatgggcg 179 ||||| ||||||||||||| Sbjct: 881 agcagctggaagatgggcg 899 Score = 123 bits (62), Expect = 8e-25 Identities = 169/205 (82%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||| |||||||||||||| || ||||| || || ||||||||| || ||||| |||| Sbjct: 989 tgactggcaagaccatcaccctggaggtggaacccagcgacaccattgagaacgtgaagg 1048 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||||||||||||||| || || || ||||| || |||||||| | Sbjct: 1049 ccaagatccaggacaaggagggcattccccccgatcaacagaggctgatctttgctggca 1108 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| |||||||||| || || | |||| |||||||| ||||| ||||| || || | Sbjct: 1109 agcagctggaagatggacgcaccctgtctgactacaacatccagaaggagtccaccctgc 1168 Query: 221 atttggtcctgaggctcaggggtgg 245 | |||| ||| | ||||||||||| Sbjct: 1169 acctggtgctgcgcctcaggggtgg 1193 Score = 119 bits (60), Expect = 1e-23 Identities = 138/164 (84%) Strand = Plus / Plus Query: 82 accatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccagcaa 141 |||||||| || |||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 574 accatcgagaatgtcaaggccaagatccaggacaaggagggcattccccccgatcagcag 633 Query: 142 aggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacatt 201 ||||| || || ||||| |||||| ||||||| ||||| || | | || |||||||| Sbjct: 634 aggctgatcttcgctggcaagcagctggaagacgggcgcaccctgtccgactacaacatc 693 Query: 202 cagaaagagtcgacgctccatttggtcctgaggctcaggggtgg 245 ||||| ||||| || |||||| | |||||| | ||||||||||| Sbjct: 694 cagaaggagtccactctccatcttgtcctgcgcctcaggggtgg 737
>gb|DQ011576.1| Euphorbia characias polyubiquitin mRNA, partial cds Length = 1100 Score = 143 bits (72), Expect = 8e-31 Identities = 125/143 (87%) Strand = Plus / Plus Query: 64 gaggtcgagagcancgacaccatcgacaacgtcaaggccaagatccaggacaaggagggc 123 ||||| ||||||| |||||| || |||||||||||||| |||||||| |||||||| || Sbjct: 688 gaggttgagagcagcgacacaattgacaacgtcaaggcaaagatccaagacaaggaaggg 747 Query: 124 attcccccagaccagcaaaggctaatttttgctggaaagcagttggaagatgggcgaaca 183 ||||||||||| ||||| ||| | || |||||||||||||| ||||||||||| || || Sbjct: 748 attcccccagatcagcagaggttgatctttgctggaaagcaattggaagatggccggacc 807 Query: 184 ttagctgattacaacattcagaa 206 || |||||||||||||||||||| Sbjct: 808 ttggctgattacaacattcagaa 830 Score = 141 bits (71), Expect = 3e-30 Identities = 154/182 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||| ||||| || ||||| ||||||| ||||||||||||||||||||||| Sbjct: 209 tgaccggaaagacgatcactcttgaggttgagagcagcgacaccatcgacaacgtcaagg 268 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 | ||||||||||| |||||||| || || || |||||||| ||| | || ||||| |||| Sbjct: 269 ctaagatccaggataaggaggggatcccaccggaccagcagaggttgatatttgccggaa 328 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||||||||||| || || || || || || ||||| |||||||| ||||| || |||| Sbjct: 329 agcagttggaagacggccgtactttggccgactacaatattcagaaggagtccaccctcc 388 Query: 221 at 222 || Sbjct: 389 at 390 Score = 123 bits (62), Expect = 8e-25 Identities = 127/149 (85%) Strand = Plus / Plus Query: 64 gaggtcgagagcancgacaccatcgacaacgtcaaggccaagatccaggacaaggagggc 123 ||||| ||||||| |||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 4 gaggttgagagcagcgacacaatcgacaatgtcaaggctaagatccaggacaaggaggga 63 Query: 124 attcccccagaccagcaaaggctaatttttgctggaaagcagttggaagatgggcgaaca 183 |||||||| || ||||| ||| | || ||||| ||||||||| |||||||||| || || Sbjct: 64 attcccccggatcagcagaggttgatctttgccggaaagcagctggaagatggccggact 123 Query: 184 ttagctgattacaacattcagaaagagtc 212 || || || || ||||||||||| ||||| Sbjct: 124 ttggccgactataacattcagaaggagtc 152 Score = 103 bits (52), Expect = 7e-19 Identities = 138/167 (82%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||| ||||| || || || ||||||||||| | ||||| ||||| || |||||| Sbjct: 436 ctgaccggaaagactattactcttgaggtcgagagtagtgacacgatcgataatgtcaag 495 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || ||||||||||||||||| || |||||||| |||||||| ||||| || ||||| ||| Sbjct: 496 gcaaagatccaggacaaggaaggaattcccccggaccagcagaggctgatctttgccgga 555 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaa 206 |||||| | || || || || || || || ||||||||||| ||||| Sbjct: 556 aagcagcttgaggacggccgtactttggccgattacaacatacagaa 602 Score = 69.9 bits (35), Expect = 1e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 64 gaggtcgagagcancgacaccatcgacaacgtcaaggccaagatccaggacaaggagggc 123 ||||| ||||||| |||||||| || || || ||||| ||||||||||| ||||| || Sbjct: 916 gaggtggagagcagtgacaccattgataatgtgaaggcgaagatccaggataaggaagga 975 Query: 124 attcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||||||||| || |||||||| || ||||| || |||||| Sbjct: 976 attcccccagatcaacaaaggcttatctttgcagggaagcag 1017
>emb|X58195.1|GGPOUBII G.gallus DNA for polyubiquitin gene Ub II Length = 1483 Score = 143 bits (72), Expect = 8e-31 Identities = 122/139 (87%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||| |||||||||||||| || ||||||||| || |||||||| || ||||| |||| Sbjct: 702 tgacaggcaagaccatcaccctggaggtcgagcccagtgacaccattgagaacgtgaagg 761 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||||||||||||||| || ||||| ||||| || |||||||| | Sbjct: 762 ccaagatccaggacaaggagggcattccccccgatcagcagaggctgatctttgctggca 821 Query: 161 agcagttggaagatgggcg 179 ||||| ||||||||||||| Sbjct: 822 agcagctggaagatgggcg 840 Score = 123 bits (62), Expect = 8e-25 Identities = 169/205 (82%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||| |||||||||||||| || ||||| || || ||||||||| || ||||| |||| Sbjct: 930 tgactggcaagaccatcaccctggaggtggaacccagcgacaccattgagaacgtgaagg 989 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||||||||||||||| || || || ||||| || |||||||| | Sbjct: 990 ccaagatccaggacaaggagggcattccccccgatcaacagaggctgatctttgctggca 1049 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| |||||||||| || || | |||| |||||||| ||||| ||||| || || | Sbjct: 1050 agcagctggaagatggacgcaccctgtctgactacaacatccagaaggagtccaccctgc 1109 Query: 221 atttggtcctgaggctcaggggtgg 245 | |||| ||| | ||||||||||| Sbjct: 1110 acctggtgctgcgcctcaggggtgg 1134 Score = 119 bits (60), Expect = 1e-23 Identities = 138/164 (84%) Strand = Plus / Plus Query: 82 accatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccagcaa 141 |||||||| || |||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 515 accatcgagaatgtcaaggccaagatccaggacaaggagggcattccccccgatcagcag 574 Query: 142 aggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacatt 201 ||||| || || ||||| |||||| ||||||| ||||| || | | || |||||||| Sbjct: 575 aggctgatcttcgctggcaagcagctggaagacgggcgcaccctgtccgactacaacatc 634 Query: 202 cagaaagagtcgacgctccatttggtcctgaggctcaggggtgg 245 ||||| ||||| || |||||| | |||||| | ||||||||||| Sbjct: 635 cagaaggagtccactctccatcttgtcctgcgcctcaggggtgg 678
>emb|AJ871355.1| Nyctotherus ovalis partial gene for ubiquitin Length = 1120 Score = 143 bits (72), Expect = 8e-31 Identities = 152/179 (84%) Strand = Plus / Minus Query: 37 acgctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtc 96 |||||||||||||| |||||||| || || |||||| || |||||||||||| | ||| Sbjct: 579 acgctgaccggcaaaaccatcacccttgacgtcgagcccaacgacaccatcgaacaagtc 520 Query: 97 aaggccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgct 156 |||||||||||||||||||||||||| |||||||| |||||||| |||| ||||| || Sbjct: 519 aaggccaagatccaggacaaggagggaattccccctgaccagcagcggctgattttcgcg 460 Query: 157 ggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 || |||||| |||||||||| || || || || || |||||||| ||||| |||||||| Sbjct: 459 ggcaagcagctggaagatggacggacgttggccgactacaacatccagaaggagtcgac 401 Score = 83.8 bits (42), Expect = 7e-13 Identities = 105/126 (83%) Strand = Plus / Minus Query: 97 aaggccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgct 156 |||||||||||||||||||||||||| ||||| || |||||||| | || || || || Sbjct: 291 aaggccaagatccaggacaaggaggggattcctcccgaccagcagcgtctcatcttcgcc 232 Query: 157 ggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacg 216 || |||||| ||||||| || |||| | ||||| |||||||||||||||||||| || Sbjct: 231 ggcaagcagctggaagacggcagaaccctcgctgactacaacattcagaaagagtccacc 172 Query: 217 ctccat 222 |||||| Sbjct: 171 ctccat 166 Score = 58.0 bits (29), Expect = 4e-05 Identities = 76/92 (82%) Strand = Plus / Minus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| ||||| |||||| || |||||||| || | || ||||| |||||| Sbjct: 795 aagaccatcaccctcgatgtcgagcccaatgacaccattgaacaggtgaaggcgaagatc 736 Query: 109 caggacaaggagggcattcccccagaccagca 140 || |||||||| |||||||| ||||| ||||| Sbjct: 735 caagacaaggaaggcattccgccagatcagca 704
>gb|AF088848.1|AF088848 Capsicum chinense polyubiquitin (Ubi) mRNA, partial cds Length = 1066 Score = 143 bits (72), Expect = 8e-31 Identities = 149/175 (85%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||| ||||||||||| || || ||||| || ||| |||||| ||||||||||| |||| Sbjct: 359 tgactggcaagaccattacccttgaggtggaaagctccgacacaatcgacaacgttaagg 418 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||| |||||||| |||||||| || ||||| ||||||||| | ||||||||||| | Sbjct: 419 ccaagattcaggacaaagagggcatcccaccagatcagcaaaggttgatttttgctggta 478 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||||||||||||| || ||| | || |||||||| |||||||| || ||||| Sbjct: 479 agcagttggaagatggacgcacactggccgattacaatattcagaaggaatcgac 533 Score = 117 bits (59), Expect = 5e-23 Identities = 151/182 (82%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||| ||||| |||||||| || ||| ||||||||| ||||| ||||||||||||||| Sbjct: 139 aagacaatcaccctcgaggttgaaagctccgacaccattgacaatgtcaaggccaagatc 198 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 ||||||||||| || || ||||||||||||||||| | || || |||||||||||| | Sbjct: 199 caggacaaggaaggaatccccccagaccagcaaagattgatcttcgctggaaagcagctt 258 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggtc 228 || || || || || | |||||||||||||| ||||| ||||| || || || |||||| Sbjct: 259 gaggacggccgcacccttgctgattacaacatccagaaggagtccacccttcacttggtc 318 Query: 229 ct 230 || Sbjct: 319 ct 320 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 85 atcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccagcaaagg 144 |||||||| || ||| | ||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 631 atcgacaatgtgaagactaagattcaggacaaggagggcattcccccagaccagcagagg 690 Query: 145 ctaatttttgctggaaagcagttggaagatgg 176 || || ||||| || |||||| | |||||||| Sbjct: 691 ctgatctttgcagggaagcagctcgaagatgg 722 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 187 gctgattacaacattcagaaagagtcgacgctccatttggt 227 |||||||||||||| ||||| ||||| || || |||||||| Sbjct: 49 gctgattacaacatccagaaggagtcaacccttcatttggt 89
>gb|BT016494.1| Zea mays clone Contig327 mRNA sequence Length = 974 Score = 141 bits (71), Expect = 3e-30 Identities = 83/87 (95%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 643 Query: 139 caaaggctaatttttgctggaaagcag 165 || |||| || ||||||||||||||| Sbjct: 644 cagcggctcatctttgctggaaagcag 670 Score = 125 bits (63), Expect = 2e-25 Identities = 110/126 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||| ||||| |||||||| ||| | |||||||| |||||||||||| Sbjct: 317 ctgaccggcaagactatcaccctcgaggtggagtcctctgacaccattgacaacgtcaag 376 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||| || ||||||||||| |||| || |||||||| Sbjct: 377 gccaagatccaggacaaggagggcatccctccagaccagcagcggctcatctttgctggg 436 Query: 160 aagcag 165 |||||| Sbjct: 437 aagcag 442 Score = 99.6 bits (50), Expect = 1e-17 Identities = 59/62 (95%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 128 gacaccattgacaacgttaaggccaagatccaggacaaggagggcatccccccagaccag 187 Query: 139 ca 140 || Sbjct: 188 ca 189
>gb|BT018032.1| Zea mays clone EL01N0530D02.c mRNA sequence Length = 1238 Score = 141 bits (71), Expect = 3e-30 Identities = 83/87 (95%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 588 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 647 Query: 139 caaaggctaatttttgctggaaagcag 165 || |||| || ||||||||||||||| Sbjct: 648 cagcggctcatctttgctggaaagcag 674 Score = 125 bits (63), Expect = 2e-25 Identities = 110/126 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||| ||||| |||||||| ||| | |||||||| |||||||||||| Sbjct: 321 ctgaccggcaagactatcaccctcgaggtggagtcctctgacaccattgacaacgtcaag 380 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||| || ||||||||||| |||| || |||||||| Sbjct: 381 gccaagatccaggacaaggagggcatccctccagaccagcagcggctcatctttgctggg 440 Query: 160 aagcag 165 |||||| Sbjct: 441 aagcag 446 Score = 99.6 bits (50), Expect = 1e-17 Identities = 59/62 (95%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 132 gacaccattgacaacgttaaggccaagatccaggacaaggagggcatccccccagaccag 191 Query: 139 ca 140 || Sbjct: 192 ca 193 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||| || ||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 816 gacaccatcgacaatgtgaaggcgaagatccaggacaaggagggcatccccccggaccag 875 Query: 139 ca 140 || Sbjct: 876 ca 877
>emb|Z24738.1|BRUBIRBPA B.rapa ubiquitin and ribosomal protein mRNA, complete CDS's Length = 587 Score = 141 bits (71), Expect = 3e-30 Identities = 172/206 (83%) Strand = Plus / Plus Query: 37 acgctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtc 96 |||||||| |||||||||||||| |||||||| ||||||| |||||||||||||| ||| Sbjct: 104 acgctgacgggcaagaccatcaccctcgaggtggagagcagtgacaccatcgacaatgtc 163 Query: 97 aaggccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgct 156 |||||||||||||||||||| || || || || || || ||||| ||| | || ||||| Sbjct: 164 aaggccaagatccaggacaaagaagggatccctccggatcagcagaggttgatctttgcc 223 Query: 157 ggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacg 216 || || ||| | |||||||| || || || ||||| |||||||| || ||||||||||| Sbjct: 224 ggtaaacagcttgaagatggtcgtaccttggctgactacaacatccaaaaagagtcgact 283 Query: 217 ctccatttggtcctgaggctcagggg 242 || ||| | ||||||||||| ||||| Sbjct: 284 ctgcatcttgtcctgaggcttagggg 309
>emb|X17020.1|PISUMPUI Pea PU1 gene mRNA for polyubiquitin Length = 1241 Score = 141 bits (71), Expect = 3e-30 Identities = 145/170 (85%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||| || || | ||||| |||||| ||||| || ||||| || |||||| Sbjct: 728 accggcaagacaattactttggaggtagagagctcagacacaattgacaatgtgaaggcc 787 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||| |||||||||||||| || || ||||||||||||||| | ||||||||||||||| Sbjct: 788 aagatacaggacaaggagggtatccctccagaccagcaaaggttgatttttgctggaaag 847 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||| | |||||||| ||||| || |||||||||||||||||||| ||||| Sbjct: 848 cagcttgaagatggccgaactttggctgattacaacattcagaaggagtc 897 Score = 141 bits (71), Expect = 3e-30 Identities = 148/174 (85%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| || ||||| |||||| || ||||| ||||| ||||||||||||||| Sbjct: 278 aagaccatcacccttgaggtggagagctctgataccattgacaatgtcaaggccaagatc 337 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||| |||||||||||||||||||| |||||||| || |||||||| || ||| | Sbjct: 338 caggacaaagagggcattcccccagaccaacaaaggctcatctttgctggcaaacagctc 397 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 |||||||| |||| || || ||||||||||| |||||||| || || |||||| Sbjct: 398 gaagatggcagaactttggccgattacaacatccagaaagaatccaccctccat 451 Score = 137 bits (69), Expect = 5e-29 Identities = 152/180 (84%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||| || || | ||||| |||||| ||||| || ||||| || |||||| Sbjct: 500 accggcaagacaattactttggaggttgagagctctgacacaattgacaatgtgaaggcc 559 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||| |||||||||||||| ||||| ||||||||||||||| | ||||||||||||||| Sbjct: 560 aagatacaggacaaggagggtattcctccagaccagcaaaggttgatttttgctggaaag 619 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | |||||||| ||||| || || || ||||||||||||||||| || || |||||| Sbjct: 620 cagctcgaagatggccgaactttggccgactacaacattcagaaagaatcaaccctccat 679 Score = 73.8 bits (37), Expect = 6e-10 Identities = 144/180 (80%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||||||||| || || || ||||| || ||||| ||||| || |||||| Sbjct: 44 accggcaagaccatcactcttgaagttgagagttcagataccatagacaatgttaaggcc 103 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||| || |||||||| || || || || |||||||| | || ||||||||||| ||| Sbjct: 104 aagattcaagacaaggaagggatccctcctgaccagcagcgtctcatttttgctggcaag 163 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 || | || |||||||| || | |||||||||||||| ||||| ||||| || |||||| Sbjct: 164 caactcgaggatgggcgtactcttgctgattacaacatacagaaggagtccaccctccat 223 Score = 60.0 bits (30), Expect = 1e-05 Identities = 108/134 (80%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| ||||| || || ||||| || || |||||||||||||| || || ||||| ||| Sbjct: 992 gacacaatcgataatgtgaaggcaaaaatacaggacaaggagggaatcccaccagatcag 1051 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||| | || |||||||| ||||| ||||| ||||| | || | ||||| |||||| Sbjct: 1052 cagaggttgatctttgctgggaagcaattggaggatggaaggactcttgctgactacaac 1111 Query: 199 attcagaaagagtc 212 |||||||| ||||| Sbjct: 1112 attcagaaggagtc 1125
>emb|X76064.1|OSPOLUBI O.sativa rub1 mRNA for polyubiquitin Length = 1673 Score = 141 bits (71), Expect = 3e-30 Identities = 172/206 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||||||| | ||||| ||||||||||| ||| Sbjct: 750 ctgaccggcaagaccatcaccctcgaggtcgagtcctcggacacgatcgacaacgtgaag 809 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||| ||||| |||||||| | || || |||||||| Sbjct: 810 gccaagatccaggacaaggagggcatccccccggaccagcagcgtctcatctttgctggc 869 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||| ||||| || || | || || |||||||| ||||| ||||| || ||| Sbjct: 870 aagcagctggaggatggccgcacccttgccgactacaacatccagaaggagtccaccctc 929 Query: 220 catttggtcctgaggctcaggggtgg 245 || | || || |||||||||||||| Sbjct: 930 caccttgtgctcaggctcaggggtgg 955 Score = 125 bits (63), Expect = 2e-25 Identities = 170/206 (82%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||||||||||||||||||||| ||||||||| | ||||| |||||||| || ||| Sbjct: 978 ctgaccggcaagaccatcacgcttgaggtcgagtcctcggacacgatcgacaatgtgaag 1037 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||| || ||||| |||||||| | || || || || || Sbjct: 1038 gccaagatccaggacaaggagggtatccccccggaccagcagcgtctcatcttcgccggc 1097 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||| ||||| || || || ||||| |||||||| ||||| ||||| || || Sbjct: 1098 aagcagctggaggatggccgcaccttggctgactacaacatccagaaggagtccaccctt 1157 Query: 220 catttggtcctgaggctcaggggtgg 245 || |||| || |||||||||||||| Sbjct: 1158 cacctggttctcaggctcaggggtgg 1183 Score = 109 bits (55), Expect = 1e-20 Identities = 165/202 (81%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||| |||||||||||||| || ||||||||| |||||||| ||||| ||||||| Sbjct: 523 tgactggcaagaccatcacccttgaggtcgagtcgtctgacaccattgacaatgtcaagg 582 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||||||||| |||||||||||||| | || || || || || | Sbjct: 583 ccaagatccaggacaaggagggcatccccccagaccagcagcgtctcatcttcgccggca 642 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| |||| ||||| || || | ||||| |||||||| ||||| ||||| || |||| Sbjct: 643 agcagctggaggatggccgcacccttgctgactacaacatccagaaggagtccaccctcc 702 Query: 221 atttggtcctgaggctcagggg 242 | | || || ||||||||||| Sbjct: 703 accttgtgctcaggctcagggg 724 Score = 103 bits (52), Expect = 7e-19 Identities = 84/95 (88%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| |||||||| ||| | |||||||| ||||| |||||||||||| Sbjct: 72 ggcaagaccatcaccctcgaggttgagtcctcggacaccattgacaatgtcaaggccaag 131 Query: 106 atccaggacaaggagggcattcccccagaccagca 140 |||||||||||||||||||| ||||| |||||||| Sbjct: 132 atccaggacaaggagggcatccccccggaccagca 166 Score = 101 bits (51), Expect = 3e-18 Identities = 164/202 (81%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||| |||||||||||||| || ||||||||| |||||||| ||||| ||||||| Sbjct: 295 tgactggcaagaccatcacccttgaggtcgagtcgtctgacaccattgacaatgtcaagg 354 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||||||||| ||||| |||||||| | || || || ||||| | Sbjct: 355 ccaagatccaggacaaggagggcatccccccggaccagcagcgtctcatcttcgctggca 414 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || | ||||| |||||||| ||||| ||||| || |||| Sbjct: 415 agcagcttgaggatggccgcaccctggctgactacaacatccagaaggagtccaccctcc 474 Query: 221 atttggtcctgaggctcagggg 242 | | || || ||||||||||| Sbjct: 475 accttgtgctcaggctcagggg 496 Score = 95.6 bits (48), Expect = 2e-16 Identities = 120/144 (83%) Strand = Plus / Plus Query: 78 cgacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagacca 137 |||||| || |||||||| ||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 1244 cgacactattgacaacgtgaaggcgaagatccaggacaaggagggcatccccccggacca 1303 Query: 138 gcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaa 197 ||| | || || |||||||| |||||| | || ||||| || || || || |||||||| Sbjct: 1304 gcagcgtctgatctttgctggtaagcagcttgaggatggccgcaccttggcggattacaa 1363 Query: 198 cattcagaaagagtcgacgctcca 221 ||| ||||| ||||| || ||||| Sbjct: 1364 catccagaaggagtccacactcca 1387
>emb|AJ844616.1| Plantago major mRNA for polyubiquitin (ubq2 gene) Length = 950 Score = 141 bits (71), Expect = 3e-30 Identities = 163/194 (84%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| ||||| || |||||| |||||||| ||||| |||||||| ||||| Sbjct: 335 aagaccatcaccctcgaagttgagagctctgacaccattgacaatgtcaaggcaaagata 394 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||||||||| |||||||| |||||||| ||| | ||||| ||||| |||||| || Sbjct: 395 caggacaaggagggtattcccccggaccagcagaggttgattttcgctggtaagcagctg 454 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggtc 228 |||||||| || || || || ||||| ||||||||||||||||| || || || ||||| Sbjct: 455 gaagatggccgtaccttggcagattataacattcagaaagagtcaaccctgcacttggtg 514 Query: 229 ctgaggctcagggg 242 ||||||| ||||| Sbjct: 515 ttgaggctgagggg 528 Score = 111 bits (56), Expect = 3e-21 Identities = 157/191 (82%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||||||||| || || ||||| |||||| ||||| ||||| || ||||||||||| Sbjct: 104 ggcaagaccattacccttgaggtggagagctctgacacgatcgataatgtcaaggccaaa 163 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 || ||||||||||| || |||||||| |||||||| ||| | || ||||| ||||||||| Sbjct: 164 attcaggacaaggaaggtattcccccggaccagcagaggttgatctttgccggaaagcag 223 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttg 225 | || ||||| || || || || ||||||||||| ||||| ||||| || || |||||| Sbjct: 224 ctcgaggatggccgtaccttggcagattacaacatccagaaggagtctactctgcatttg 283 Query: 226 gtcctgaggct 236 ||||| ||||| Sbjct: 284 gtcctcaggct 294 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||||||||| || || |||||||||||||| ||||||||||| ||| Sbjct: 617 aagatccaggataaggagggcatcccacctgaccagcaaaggctcatttttgctgggaag 676 Query: 163 ca 164 || Sbjct: 677 ca 678
>gb|L81140.1| Pisum sativum (Alaska) ubiquitin (PUB2) gene, complete cds Length = 2482 Score = 141 bits (71), Expect = 3e-30 Identities = 145/170 (85%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||| || || | ||||| |||||| ||||| || ||||| || |||||| Sbjct: 1628 accggcaagacaattactttggaggtagagagctcagacacaattgacaatgtgaaggcc 1687 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||| |||||||||||||| || || ||||||||||||||| | ||||||||||||||| Sbjct: 1688 aagatacaggacaaggagggtatccctccagaccagcaaaggttgatttttgctggaaag 1747 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||| | |||||||| ||||| || |||||||||||||||||||| ||||| Sbjct: 1748 cagcttgaagatggccgaactttggctgattacaacattcagaaggagtc 1797 Score = 141 bits (71), Expect = 3e-30 Identities = 148/174 (85%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| || ||||| |||||| || ||||| ||||| ||||||||||||||| Sbjct: 950 aagaccatcacccttgaggtggagagctctgataccattgacaatgtcaaggccaagatc 1009 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||| |||||||||||||||||||| |||||||| || |||||||| || ||| | Sbjct: 1010 caggacaaagagggcattcccccagaccaacaaaggctcatctttgctggcaaacagctc 1069 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 |||||||| |||| || || ||||||||||| |||||||| || || |||||| Sbjct: 1070 gaagatggcagaactttggccgattacaacatccagaaagaatccaccctccat 1123 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| || ||||| || ||||||||||| |||||||||||||| ||||| ||||||||| Sbjct: 1436 gacacaattgacaatgtgaaggccaagatacaggacaaggagggtattcctccagaccag 1495 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 |||||| | ||||||||||| |||||| | |||||||| ||||| || || || |||||| Sbjct: 1496 caaaggttgatttttgctggcaagcagctcgaagatggccgaactttggccgactacaac 1555 Query: 199 attcagaaagagtcgacgctccat 222 || |||||||| || || |||||| Sbjct: 1556 atccagaaagaatccaccctccat 1579 Score = 111 bits (56), Expect = 3e-21 Identities = 122/144 (84%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| || ||||| || ||||| ||||| || ||||||||||| ||||| ||||||||| Sbjct: 1208 gacacaattgacaatgtgaaggctaagattcaagacaaggagggtattccaccagaccag 1267 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 |||||||| || ||||| ||||||||| | |||||||| ||||| || || ||||||||| Sbjct: 1268 caaaggctcatctttgccggaaagcagcttgaagatggccgaactttggccgattacaac 1327 Query: 199 attcagaaagagtcgacgctccat 222 || |||||||| || || |||||| Sbjct: 1328 atccagaaagaatcaaccctccat 1351 Score = 73.8 bits (37), Expect = 6e-10 Identities = 144/180 (80%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||||||||| || || || ||||| || ||||| ||||| || |||||| Sbjct: 716 accggcaagaccatcactcttgaagttgagagttcagataccatagacaatgttaaggcc 775 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||| || |||||||| || || || || |||||||| | || ||||||||||| ||| Sbjct: 776 aagattcaagacaaggaagggatccctcctgaccagcagcgtctcatttttgctggcaag 835 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 || | || |||||||| || | |||||||||||||| ||||| ||||| || |||||| Sbjct: 836 caactcgaggatgggcgtactcttgctgattacaacatacagaaggagtccaccctccat 895 Score = 60.0 bits (30), Expect = 1e-05 Identities = 108/134 (80%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| ||||| || || ||||| || || |||||||||||||| || || ||||| ||| Sbjct: 1892 gacacaatcgataatgtgaaggcaaaaatacaggacaaggagggaatcccaccagatcag 1951 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||| | || |||||||| ||||| ||||| ||||| | || | ||||| |||||| Sbjct: 1952 cagaggttgatctttgctgggaagcaattggaggatggaaggactcttgctgactacaac 2011 Query: 199 attcagaaagagtc 212 |||||||| ||||| Sbjct: 2012 attcagaaggagtc 2025
>gb|AC158180.2| Selaginella moellendorffii chromosome JGIASXY-5A14, complete sequence Length = 36906 Score = 141 bits (71), Expect = 3e-30 Identities = 154/182 (84%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||| ||||| | ||||| |||||| |||||| || |||||||| ||| ||||| Sbjct: 5343 ggcaagacgatcaccttggaggtagagagctccgacacgattgacaacgttaagaccaag 5402 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||||||||||||||||||||| || |||||||| ||||| || || ||||| |||||| Sbjct: 5403 atccaggacaaggagggcattccaccggaccagcagaggctcatcttcgctggcaagcag 5462 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttg 225 | || ||||| || || | |||||||||||||| ||||| |||||||||||||||||| Sbjct: 5463 ctcgaggatggccggactcttgctgattacaacatccagaaggagtcgacgctccatttg 5522 Query: 226 gt 227 || Sbjct: 5523 gt 5524 Score = 117 bits (59), Expect = 5e-23 Identities = 151/182 (82%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||| |||||||||||||| |||||| |||||| || |||||||| ||| |||||||| Sbjct: 4890 aagacgatcacgctcgaggtggagagctccgacacaattgacaacgtgaagaccaagatc 4949 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 ||||||||||| || || ||||| |||||||| | | || ||||| || |||||| | Sbjct: 4950 caggacaaggaaggtatccccccggaccagcagcgtttgatctttgcgggcaagcagcta 5009 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggtc 228 |||||||| || || | || || |||||||| ||||| ||||||||||||||||||||| Sbjct: 5010 gaagatggccggactctggccgactacaacatccagaaggagtcgacgctccatttggtc 5069 Query: 229 ct 230 || Sbjct: 5070 ct 5071 Score = 109 bits (55), Expect = 1e-20 Identities = 150/182 (82%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||| |||||||||||||| |||||| |||||| || |||||||| ||| |||||||| Sbjct: 4662 aagacgatcacgctcgaggtggagagctccgacacaattgacaacgtgaagaccaagatc 4721 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 ||||||||||| |||||||| || |||||||| | | || ||||| || |||||| | Sbjct: 4722 caggacaaggaaggcattcctccggaccagcagcgtttgatctttgcgggcaagcagcta 4781 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggtc 228 |||||||| || || | || || |||||||| ||||| || || ||||||||||||||| Sbjct: 4782 gaagatggccggactctggccgactacaacatccagaaggaatccacgctccatttggtc 4841 Query: 229 ct 230 || Sbjct: 4842 ct 4843 Score = 93.7 bits (47), Expect = 7e-16 Identities = 148/182 (81%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||| || ||||||||||| |||||| |||||| ||||||||||| ||| |||||||| Sbjct: 4434 aagacgattacgctcgaggtggagagctccgacacgatcgacaacgttaagaccaagatc 4493 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 ||||||||||| ||||| || || |||||||| | | || ||||| || |||||| | Sbjct: 4494 caggacaaggaaggcatccctccggaccagcagcgattgatctttgccggcaagcagcta 4553 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggtc 228 |||||||| || || | || || |||||||| || || || || ||||||||||||||| Sbjct: 4554 gaagatggccggactcttgccgactacaacatccaaaaggaatctacgctccatttggtc 4613 Query: 229 ct 230 || Sbjct: 4614 ct 4615 Score = 93.7 bits (47), Expect = 7e-16 Identities = 85/98 (86%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||| ||||||||||||||||||||| |||||| ||||| || || ||| | Sbjct: 4200 accggcaagacgatcacgctcgaggtcgagagctccgacacgatcgataatgttaagtcg 4259 Query: 103 aagatccaggacaaggagggcattcccccagaccagca 140 ||||||||||| |||||||| ||||| || |||||||| Sbjct: 4260 aagatccaggataaggagggaattcctccggaccagca 4297 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| ||||||||||| ||| ||||||||||||||||||| ||||| ||||| |||||| Sbjct: 5148 gacacgatcgacaacgtgaagaccaagatccaggacaaggaaggcatccccccggaccag 5207 Query: 139 ca 140 || Sbjct: 5208 ca 5209
>gb|L21898.1|BRRUBIRIPL Brassica rapa ubiquitin/ribosomal protein mRNA, complete cds Length = 578 Score = 141 bits (71), Expect = 3e-30 Identities = 172/206 (83%) Strand = Plus / Plus Query: 37 acgctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtc 96 |||||||| |||||||||||||| |||||||| ||||||| |||||||||||||| ||| Sbjct: 104 acgctgacgggcaagaccatcaccctcgaggtggagagcagtgacaccatcgacaatgtc 163 Query: 97 aaggccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgct 156 |||||||||||||||||||| || || || || || || ||||| ||| | || ||||| Sbjct: 164 aaggccaagatccaggacaaagaagggatccctccggatcagcagaggttgatctttgcc 223 Query: 157 ggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacg 216 || || ||| | |||||||| || || || ||||| |||||||| || ||||||||||| Sbjct: 224 ggtaaacagcttgaagatggtcgtaccttggctgactacaacatccaaaaagagtcgact 283 Query: 217 ctccatttggtcctgaggctcagggg 242 || ||| | ||||||||||| ||||| Sbjct: 284 ctgcatcttgtcctgaggcttagggg 309
>gb|BC066197.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:76690 IMAGE:6435236), complete cds Length = 1214 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 378 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 437 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 438 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 497 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 498 aagcagctggaagatggccgcaccctccctgattacaacatccagaaagagtc 550 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 150 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 209 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 210 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 269 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 270 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 322 Score = 123 bits (62), Expect = 8e-25 Identities = 145/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 606 ctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 665 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 666 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 725 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 726 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 778 Score = 113 bits (57), Expect = 7e-22 Identities = 146/176 (82%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| | ||||| ||| || | ||||||||| || || ||| Sbjct: 834 ctgaccggcaagaccatcaccttggaggtggagcccagtgtcaccatcgagaatgtgaag 893 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 894 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 953 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| | |||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 954 aagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcgac 1009
>gb|BC070919.1| Rattus norvegicus polyubiquitin, mRNA (cDNA clone MGC:91487 IMAGE:7104905), complete cds Length = 1170 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 778 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 837 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 838 gccaagatccaggataaagagggcatcccccctgaccagcagaggctcatctttgccggc 897 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 898 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 950 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 322 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 381 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 382 gccaagatccaggataaagagggcatcccccctgaccagcagaggctcatctttgccggc 441 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 442 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 494 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 94 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 153 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 154 gccaagatccaggataaagagggcatcccccctgaccagcagaggctcatctttgccggc 213 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 214 aagcagctggaagatggccgcaccctctctgactacaacatccagaaagagtc 266 Score = 123 bits (62), Expect = 8e-25 Identities = 118/137 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 550 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 609 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 610 gccaagatccaggataaagagggcatcccccctgaccagcagaggctcatctttgccggc 669 Query: 160 aagcagttggaagatgg 176 |||||| |||||||||| Sbjct: 670 aagcagctggaagatgg 686
>gb|BC060312.1| Rattus norvegicus polyubiquitin, mRNA (cDNA clone MGC:72686 IMAGE:6919609), complete cds Length = 1199 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 808 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 867 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 868 gccaagatccaggataaagagggcatcccccctgaccagcagaggctcatctttgccggc 927 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 928 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 980 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 352 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 411 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 412 gccaagatccaggataaagagggcatcccccctgaccagcagaggctcatctttgccggc 471 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 472 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 524 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 580 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 639 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 640 gccaagatccaggataaagagggcatcccccctgaccagcagaggctcatctttgccggc 699 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 700 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 752 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 124 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 183 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 184 gccaagatccaggataaagagggcatcccccctgaccagcagaggctcatctttgccggc 243 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 244 aagcagctggaagatggccgcaccctctctgactacaacatccagaaagagtc 296
>gb|BC019850.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:29922 IMAGE:5123849), complete cds Length = 1146 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 89 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 148 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 149 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 208 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 209 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 261 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| || || ||| Sbjct: 773 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaatgtgaag 832 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 833 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 892 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 893 aagcagctggaagatggccgcactctctctgattacaacatccagaaagagtcgac 948 Score = 123 bits (62), Expect = 8e-25 Identities = 145/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 545 ctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 604 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 605 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 664 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 665 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 717 Score = 123 bits (62), Expect = 8e-25 Identities = 145/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| || || ||| Sbjct: 317 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaatgtgaag 376 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 377 gccaagatccaggataaagagggcatcccccctgaccagcataggctgatctttgccggc 436 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 437 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 489
>ref|NM_011664.2| Mus musculus ubiquitin B (Ubb), mRNA Length = 1167 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 349 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 408 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 409 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 468 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 469 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 521 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 121 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 180 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 181 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 240 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 241 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 293 Score = 123 bits (62), Expect = 8e-25 Identities = 145/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 577 ctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 636 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 637 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 696 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 697 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 749 Score = 121 bits (61), Expect = 3e-24 Identities = 147/176 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| | ||||| ||| || ||||||||||| || || ||| Sbjct: 805 ctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgagaatgtgaag 864 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 865 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 924 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| | |||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 925 aagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcgac 980
>ref|XR_004579.1| PREDICTED: Mus musculus gene model 1821, (NCBI) (Gm1821), misc RNA Length = 977 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 355 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 414 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 415 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 474 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 475 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 527 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 127 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 186 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 187 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 246 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 247 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 299 Score = 129 bits (65), Expect = 1e-26 Identities = 148/176 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 583 ctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 642 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 643 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 702 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| | |||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 703 aagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcgac 758
>gb|BC100341.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:117670 IMAGE:30787432), complete cds Length = 1145 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 303 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 362 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 363 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 422 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 423 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 475 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 75 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 134 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 135 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 194 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 195 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 247 Score = 123 bits (62), Expect = 8e-25 Identities = 145/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 531 ctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 590 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 591 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 650 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 651 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 703 Score = 121 bits (61), Expect = 3e-24 Identities = 147/176 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| | ||||| ||| || ||||||||||| || || ||| Sbjct: 759 ctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgagaatgtgaag 818 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 819 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 878 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| | |||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 879 aagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcgac 934
>emb|AL596181.10| Mouse DNA sequence from clone RP23-234K24 on chromosome 11 Contains nine novel genes, the Trpv2 for member 2 transient receptor potential cation channel subfamily V, the Ubb gene for ubiquitin B, the 3' end of the gene for the ortholog of human and rat phosphatidylinositol glycan class L PIGL and five CpG islands, complete sequence Length = 195339 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 121756 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 121697 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 121696 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 121637 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 121636 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 121584 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 121984 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 121925 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 121924 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 121865 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 121864 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 121812 Score = 123 bits (62), Expect = 8e-25 Identities = 145/173 (83%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 121528 ctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 121469 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 121468 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 121409 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 121408 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 121356 Score = 121 bits (61), Expect = 3e-24 Identities = 147/176 (83%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| | ||||| ||| || ||||||||||| || || ||| Sbjct: 121300 ctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgagaatgtgaag 121241 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 121240 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 121181 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| | |||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 121180 aagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcgac 121125
>emb|AJ844615.1| Plantago major ubq1 gene for polyubiquitin Length = 1189 Score = 139 bits (70), Expect = 1e-29 Identities = 138/161 (85%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||| |||||| ||||||||| |||||||| ||||||||| Sbjct: 316 ggcaagaccatcacccttgaggtggagagctccgacaccattgacaacgttaaggccaag 375 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||| || |||||||||||||||||||||||||| ||| | || ||||| || ||||| Sbjct: 376 atccaagataaggagggcattcccccagaccagcagaggttgatctttgccggcaagcaa 435 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaa 206 | || |||||||| || | |||||||||||||||||||| Sbjct: 436 cttgaggatgggcgtacccttgctgattacaacattcagaa 476 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| || ||||| ||||| || || ||||||||||| || || || ||||||||| Sbjct: 805 gacaccattgataacgtgaaggctaaaattcaggacaaggaaggtatccctccagaccag 864 Query: 139 caaaggctaatttttgctggaaagcagttgga 170 || ||||| || || ||||||||||||||||| Sbjct: 865 cagaggctcatcttcgctggaaagcagttgga 896 Score = 60.0 bits (30), Expect = 1e-05 Identities = 81/98 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| || || ||||| || || ||||||||||| || || || || |||||| Sbjct: 577 gacaccatcgataatgtgaaggcgaaaattcaggacaaggaaggtatcccaccggaccag 636 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgg 176 || || || || |||||||||||||| ||||| ||||| Sbjct: 637 cagagacttatctttgctggaaagcaattggaggatgg 674 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||||||||| || || || || |||||||||||| | || ||||| || ||| Sbjct: 145 aagatccaggacaaggaagggatccctccggaccagcaaaggttgatctttgccggtaag 204 Query: 163 cagttggaagatgg 176 ||| |||| ||||| Sbjct: 205 cagctggaggatgg 218
>dbj|AK132747.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4922505B09 product:ubiquitin B, full insert sequence Length = 1166 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 349 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 408 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 409 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 468 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 469 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 521 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 121 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 180 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 181 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 240 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 241 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 293 Score = 123 bits (62), Expect = 8e-25 Identities = 145/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 577 ctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 636 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 637 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 696 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 697 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 749 Score = 121 bits (61), Expect = 3e-24 Identities = 147/176 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| | ||||| ||| || ||||||||||| || || ||| Sbjct: 805 ctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgagaatgtgaag 864 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 865 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 924 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| | |||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 925 aagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcgac 980
>dbj|AK165313.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430012C16 product:ubiquitin B, full insert sequence Length = 1159 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 348 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 407 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 408 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 467 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 468 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 520 Score = 123 bits (62), Expect = 8e-25 Identities = 145/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 576 ctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 635 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 636 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 695 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 696 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 748 Score = 121 bits (61), Expect = 3e-24 Identities = 147/176 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| | ||||| ||| || ||||||||||| || || ||| Sbjct: 804 ctgaccggcaagaccatcaccttggaggtggagcccagagacaccatcgagaatgtgaag 863 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 864 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 923 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| | |||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 924 aagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcgac 979 Score = 115 bits (58), Expect = 2e-22 Identities = 145/173 (83%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 121 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 180 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 181 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 240 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| | |||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 241 aagcagct-gaagatggccgcaccctctctgattacaacatccagaaggagtc 292
>gb|L81139.1| Pisum sativum (Alaska) ubiquitin (PUB1) gene, complete cds Length = 2536 Score = 139 bits (70), Expect = 1e-29 Identities = 127/146 (86%) Strand = Plus / Plus Query: 82 accatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccagcaa 141 ||||| ||||| || |||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 880 accattgacaatgttaaggccaagatccaggacaaggaggggattccccccgaccagcag 939 Query: 142 aggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacatt 201 | || |||||||||||||||||| |||| || |||||||| | |||||||||||||| Sbjct: 940 cgtctcatttttgctggaaagcagctggaggacgggcgaacccttgctgattacaacatc 999 Query: 202 cagaaagagtcgacgctccatttggt 227 ||||| ||||| || ||||||||||| Sbjct: 1000 cagaaggagtccacactccatttggt 1025 Score = 135 bits (68), Expect = 2e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| || ||||| || ||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 1561 gacacaattgacaatgtgaaggctaagatacaggacaaggagggcattcccccagaccag 1620 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 |||||||| ||||||||||||||||| | |||||||| ||||| || ||||||||||| Sbjct: 1621 caaaggctgatttttgctggaaagcaactcgaagatggccgaactttggctgattacaat 1680 Query: 199 attcagaa 206 || ||||| Sbjct: 1681 atccagaa 1688 Score = 127 bits (64), Expect = 5e-26 Identities = 150/179 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||||||||| || ||||| ||||| ||||||||| ||||| || |||||| Sbjct: 1069 accggaaagaccatcactcttgaggttgagagttccgacaccattgacaatgtgaaggcc 1128 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||| ||||| || ||||| || || ||||| ||||| ||||| || |||||||| || Sbjct: 1129 aagattcaggataaagagggtatcccaccagatcagcagaggcttatatttgctggtaaa 1188 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 ||| | |||||||| ||||| ||||| ||||||||||||||||||||||| || ||||| Sbjct: 1189 cagcttgaagatggccgaactttagcagattacaacattcagaaagagtccactctcca 1247 Score = 115 bits (58), Expect = 2e-22 Identities = 124/146 (84%) Strand = Plus / Plus Query: 82 accatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccagcaa 141 ||||| ||||| || ||||||||||| || |||||||| || ||||| ||||||||||| Sbjct: 652 accattgacaatgttaaggccaagattcaagacaaggaagggattccaccagaccagcag 711 Query: 142 aggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacatt 201 | || |||||||||||||||||| |||| || ||| |||| || |||||||||||||| Sbjct: 712 cgtctcatttttgctggaaagcagctggaggacgggagaaccttggctgattacaacatc 771 Query: 202 cagaaagagtcgacgctccatttggt 227 ||||| ||||| || ||||||||||| Sbjct: 772 cagaaggagtccacactccatttggt 797 Score = 65.9 bits (33), Expect = 2e-07 Identities = 113/140 (80%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||||||||| || ||||| |||||| ||||| || ||||| || ||||| Sbjct: 1297 accggaaagaccatcactcttgaggtagagagctcagacacaattgacaatgtgaaggct 1356 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||| || ||||| ||||| || || ||||| ||||| ||||| || ||||||||||| Sbjct: 1357 aagatacaagacaaagagggtatcccaccagatcagcagaggcttatctttgctggaaaa 1416 Query: 163 cagttggaagatgggcgaac 182 || | |||||||| ||||| Sbjct: 1417 caacttgaagatggccgaac 1436 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||||||||| || || ||||| ||||| ||| | || |||||||| ||||| ||| Sbjct: 1819 caggacaaggagggaatcccaccagatcagcagaggttgatctttgctgggaagcaattg 1878 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 || ||||| | || | ||||| || ||||||||||||||||| || ||||| Sbjct: 1879 gaggatggaaggacccttgctgactataacattcagaaagagtccactctcca 1931 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 343 aaagagggtattccacctgttcaacagaggctcatctatgctgggaagcaact 395 ||||||||||| ||||| | ||| |||||||| |||| |||||| || ||||| Sbjct: 1369 aaagagggtatcccaccagatcagcagaggcttatctttgctggaaaacaact 1421
>dbj|AK010625.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410036G24 product:ubiquitin B, full insert sequence Length = 1160 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 349 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 408 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 409 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 468 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 469 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 521 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 121 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 180 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 181 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 240 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 241 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 293 Score = 123 bits (62), Expect = 8e-25 Identities = 145/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 577 ctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 636 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 637 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 696 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 697 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 749 Score = 121 bits (61), Expect = 3e-24 Identities = 147/176 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| | ||||| ||| || ||||||||||| || || ||| Sbjct: 805 ctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgagaatgtgaag 864 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 865 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 924 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| | |||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 925 aagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcgac 980
>dbj|AK010413.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410005G06 product:polyubiquitin 4, full insert sequence Length = 1165 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 350 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 409 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 410 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 469 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 470 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 522 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 122 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 181 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 182 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 241 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 242 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 294 Score = 123 bits (62), Expect = 8e-25 Identities = 145/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 578 ctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 637 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 638 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 697 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 698 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 750 Score = 121 bits (61), Expect = 3e-24 Identities = 147/176 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| | ||||| ||| || ||||||||||| || || ||| Sbjct: 806 ctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgagaatgtgaag 865 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 866 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 925 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| | |||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 926 aagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcgac 981
>dbj|AK013027.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810407D23 product:ubiquitin B, full insert sequence Length = 1167 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 349 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 408 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 409 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 468 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 469 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 521 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 121 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 180 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 181 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 240 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 241 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 293 Score = 123 bits (62), Expect = 8e-25 Identities = 145/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 577 ctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 636 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 637 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 696 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 697 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 749 Score = 121 bits (61), Expect = 3e-24 Identities = 147/176 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| | ||||| ||| || ||||||||||| || || ||| Sbjct: 805 ctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgagaatgtgaag 864 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 865 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 924 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| | |||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 925 aagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcgac 980
>dbj|AK012443.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700055N04 product:ubiquitin B, full insert sequence Length = 1166 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 350 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 409 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 410 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 469 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 470 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 522 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 122 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 181 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 182 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 241 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 242 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 294 Score = 123 bits (62), Expect = 8e-25 Identities = 145/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 578 ctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 637 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 638 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 697 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 698 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 750 Score = 121 bits (61), Expect = 3e-24 Identities = 147/176 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| | ||||| ||| || ||||||||||| || || ||| Sbjct: 806 ctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgagaatgtgaag 865 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 866 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 925 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| | |||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 926 aagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcgac 981
>dbj|AK007273.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700124N12 product:ubiquitin B, full insert sequence Length = 1195 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 380 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 439 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 440 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 499 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 500 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 552 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 152 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 211 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 212 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 271 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 272 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 324 Score = 123 bits (62), Expect = 8e-25 Identities = 145/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 608 ctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 667 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 668 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 727 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 728 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 780 Score = 121 bits (61), Expect = 3e-24 Identities = 147/176 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| | ||||| ||| || ||||||||||| || || ||| Sbjct: 836 ctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgagaatgtgaag 895 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 896 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 955 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| | |||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 956 aagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcgac 1011
>gb|AF154647.1| Nicotiana tabacum clone PR32 mRNA sequence Length = 637 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||||||||| || ||||||||||| |||||||||||||| ||||||||| Sbjct: 238 accggcaagaccatcacccttgaggtcgagagttctgacaccatcgacaatgtcaaggcc 297 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 || || ||||| |||||||||||||||||||||||||| ||| | || || ||||| ||| Sbjct: 298 aaaattcaggataaggagggcattcccccagaccagcagaggttgatattcgctggcaag 357 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 ||| | || ||||| || || |||||||||||||||| ||||| || ||||| Sbjct: 358 cagctcgaggatggccgtaccctagctgattacaacatccagaaggaatcgac 410 Score = 97.6 bits (49), Expect = 4e-17 Identities = 135/164 (82%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 |||||||| || |||||||| ||||| |||||| ||||||||||| || ||||| ||| Sbjct: 16 aagaccattactctcgaggttgagagttccgacacaatcgacaacgtaaaagccaaaatc 75 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 ||||||||||| || ||||||||||| ||||||||||| || || || || |||||| | Sbjct: 76 caggacaaggaaggaattcccccagatcagcaaaggcttatcttcgccggcaagcagctt 135 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || || || || || |||| ||||||||||| ||||| ||||| Sbjct: 136 gaggacggacgtaccctagccgattacaacatccagaaggagtc 179
>gb|BC078726.1| Rattus norvegicus polyubiquitin, mRNA (cDNA clone IMAGE:7126996) Length = 409 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 24 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 83 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 84 gccaagatccaggataaagagggcatcccccctgaccagcagaggctcatctttgccggc 143 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 144 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 196
>ref|NM_138895.1| Rattus norvegicus polyubiquitin (Ubb), mRNA Length = 1115 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 769 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 828 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 829 gccaagatccaggataaagagggcatcccccctgaccagcagaggctcatctttgccggc 888 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 889 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 941 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 313 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 372 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 373 gccaagatccaggataaagagggcatcccccctgaccagcagaggctcatctttgccggc 432 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 433 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 485 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 541 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 600 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 601 gccaagatccaggataaagagggcatcccccctgaccagcagaggctcatctttgccggc 660 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 661 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 713 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 85 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 144 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 145 gccaagatccaggataaagagggcatcccccctgaccagcagaggctcatctttgccggc 204 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 205 aagcagctggaagatggccgcaccctctctgactacaacatccagaaagagtc 257
>dbj|D16554.1|RATPOLYU Rattus norvegicus mRNA for polyubiquitin, complete cds, four repetitive ubiquitins in tandem Length = 1115 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 769 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 828 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 829 gccaagatccaggataaagagggcatcccccctgaccagcagaggctcatctttgccggc 888 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 889 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 941 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 313 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 372 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 373 gccaagatccaggataaagagggcatcccccctgaccagcagaggctcatctttgccggc 432 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 433 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 485 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 541 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 600 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 601 gccaagatccaggataaagagggcatcccccctgaccagcagaggctcatctttgccggc 660 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 661 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 713 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 85 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 144 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 145 gccaagatccaggataaagagggcatcccccctgaccagcagaggctcatctttgccggc 204 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 205 aagcagctggaagatggccgcaccctctctgactacaacatccagaaagagtc 257
>gb|AF502575.1| Musa acuminata ubiquitin (UBQ1) gene, complete cds Length = 1146 Score = 139 bits (70), Expect = 1e-29 Identities = 153/181 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||| |||||||||||||| |||||||| ||||| |||||||||||||| ||||||| Sbjct: 479 tgactggcaagaccatcaccctcgaggtggagagttctgacaccatcgacaatgtcaagg 538 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||| ||||| |||||||||||||| || |||||||| ||||| || ||||| || | Sbjct: 539 ccaagattcaggataaggagggcattccaccggaccagcagaggctcatctttgccggca 598 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| |||| || || || || || |||||||||||||| ||||| ||||| || |||| Sbjct: 599 agcagctggaggacggccgcaccttggctgattacaacatccagaaggagtccaccctcc 658 Query: 221 a 221 | Sbjct: 659 a 659 Score = 139 bits (70), Expect = 1e-29 Identities = 153/181 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||| |||||||||||||| |||||||| ||||| |||||||||||||| ||||||| Sbjct: 251 tgactggcaagaccatcaccctcgaggtggagagttctgacaccatcgacaatgtcaagg 310 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 | ||||| ||||| |||||||||||||| ||||||||||||||||| || ||||| || | Sbjct: 311 ctaagattcaggataaggagggcattcctccagaccagcaaaggctcatctttgccggca 370 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || | |||||||||||||| ||||| ||||| || |||| Sbjct: 371 agcagcttgaggatggccgcaccctggctgattacaacatccagaaggagtccaccctcc 430 Query: 221 a 221 | Sbjct: 431 a 431 Score = 121 bits (61), Expect = 3e-24 Identities = 138/164 (84%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| || |||| |||||| |||||||||||||| || ||||||||||| Sbjct: 715 aagaccatcacccttaaggtggagagctcggacaccatcgacaatgtaaaggccaagatt 774 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||||||||| |||||||| |||||||||||||| || ||||| || |||||| | Sbjct: 775 caggacaaggagggtattcccccggaccagcaaaggctcatctttgccggcaagcagctt 834 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||||| || || | || ||||||||||||||||| ||||| Sbjct: 835 gaggatggccgcaccctggcagattacaacattcagaaggagtc 878 Score = 93.7 bits (47), Expect = 7e-16 Identities = 119/143 (83%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||| |||||||| |||||||||||||| ||||| || || ||||||||| Sbjct: 61 gacaccatcgacaatgtcaaggctaagatccaggacaaagagggaatccctccagaccag 120 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 |||||||| || ||||| || ||||| | || ||||| || || | || ||||||||| Sbjct: 121 caaaggctgatctttgccggtaagcaacttgaggatggccggacccttgcggattacaac 180 Query: 199 attcagaaagagtcgacgctcca 221 || ||||| ||||| || ||||| Sbjct: 181 atccagaaggagtccaccctcca 203 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/113 (84%) Strand = Plus / Plus Query: 94 gtcaaggccaagatccaggacaaggagggcattcccccagaccagcaaaggctaattttt 153 |||||||| |||||||||||||||||||| ||||| || || ||||| ||||| || ||| Sbjct: 988 gtcaaggcaaagatccaggacaaggaggggattccaccggatcagcagaggctgatcttt 1047 Query: 154 gctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaa 206 ||||| |||||| |||| || ||||| || | || ||||||||||||||||| Sbjct: 1048 gctgggaagcagctggaggacgggcgcaccctggcagattacaacattcagaa 1100 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 346 gagggtattccacctgttcaacagaggctcatctatgctgggaagca 392 ||||| |||||||| | ||| |||||||| |||| |||||||||||| Sbjct: 1012 gaggggattccaccggatcagcagaggctgatctttgctgggaagca 1058
>emb|X51703.1|MMUBIQU Mouse mRNA for ubiquitin Length = 1172 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 354 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 413 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 414 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 473 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 474 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 526 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 126 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 185 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 186 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 245 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 246 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 298 Score = 121 bits (61), Expect = 3e-24 Identities = 147/176 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| | ||||| ||| || ||||||||||| || || ||| Sbjct: 810 ctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgagaatgtgaag 869 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 870 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 929 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| | |||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 930 aagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcgac 985 Score = 115 bits (58), Expect = 2e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 582 ctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 641 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 642 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 701 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 702 aaacagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 754
>gb|AC163692.4| Mus musculus BAC clone RP24-68H1 from chromosome 14, complete sequence Length = 224333 Score = 139 bits (70), Expect = 1e-29 Identities = 147/173 (84%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 145850 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 145791 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 145790 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 145731 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 145730 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 145678 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 146078 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 146019 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 146018 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 145959 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 145958 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 145906 Score = 129 bits (65), Expect = 1e-26 Identities = 148/176 (84%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 145622 ctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 145563 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 145562 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 145503 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| | |||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 145502 aagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcgac 145447
>gb|DQ216247.1| Taeniopygia guttata clone 0058P0020E12 ubiquitin C variant 7-like mRNA, complete sequence Length = 1383 Score = 137 bits (69), Expect = 5e-29 Identities = 122/140 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || || || ||| || |||||||||||| || |||||| Sbjct: 1002 ctgactggcaagaccatcaccctggaagttgagcccagcgacaccatcgagaatgtcaag 1061 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| |||||||||||||||||||| ||||| ||||| || || Sbjct: 1062 gccaagatccaggataaggaaggcattcccccagaccagcagaggctgattttcgccggc 1121 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 1122 aagcagctggaagatgggcg 1141 Score = 131 bits (66), Expect = 3e-27 Identities = 119/137 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || |||||||| || || || ||| Sbjct: 90 ctgactggcaagaccatcacccttgaggtggagcccagtgacaccattgaaaatgtgaag 149 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| || Sbjct: 150 gccaagatccaggacaaggagggcattcccccagaccagcagaggctgatctttgccggt 209 Query: 160 aagcagttggaagatgg 176 |||||| |||||||||| Sbjct: 210 aagcagctggaagatgg 226 Score = 125 bits (63), Expect = 2e-25 Identities = 170/206 (82%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || |||||||| || || |||||| Sbjct: 774 ctgaccggcaagaccatcactcttgaggtggagcccagtgacaccattgaaaatgtcaag 833 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || || |||||||| ||||| || || ||||| Sbjct: 834 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatcttcgctggc 893 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| ||||||||||||| || | |||| |||||||| |||||||| || || || Sbjct: 894 aagcagctggaagatgggcgcaccctctctgactacaacatccagaaagaatccaccctg 953 Query: 220 catttggtcctgaggctcaggggtgg 245 ||| |||| ||| | ||||||||||| Sbjct: 954 catctggtgctgcgcctcaggggtgg 979 Score = 121 bits (61), Expect = 3e-24 Identities = 120/140 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || ||||||||| || || |||||| Sbjct: 546 ctgaccggcaagaccatcaccctggaagttgagcccagcgacaccattgaaaatgtcaag 605 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| || || || || |||||||| ||||| || |||||||| Sbjct: 606 gccaagatccaggacaaggaaggtatccctcctgaccagcagaggctgatctttgctggc 665 Query: 160 aagcagttggaagatgggcg 179 |||||| ||||||||||||| Sbjct: 666 aagcagctggaagatgggcg 685 Score = 113 bits (57), Expect = 7e-22 Identities = 119/140 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || |||||||| || || || ||| Sbjct: 318 ctgaccggcaagaccatcaccctggaagttgagcccagtgacaccattgaaaatgtgaag 377 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||| || || |||||||| ||||| || |||||||| Sbjct: 378 gccaagatccaggacaaggagggcatccctcctgaccagcagaggctgatctttgctggt 437 Query: 160 aagcagttggaagatgggcg 179 |||||| |||| |||||||| Sbjct: 438 aagcagctggaggatgggcg 457
>gb|BT018987.1| Zea mays clone Contig444.F mRNA sequence Length = 668 Score = 137 bits (69), Expect = 5e-29 Identities = 122/140 (87%) Strand = Plus / Minus Query: 37 acgctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtc 96 |||||||| || ||||||||||| |||||||||||||||| ||||||||||||||| ||| Sbjct: 588 acgctgacagggaagaccatcaccctcgaggtcgagagcagcgacaccatcgacaatgtc 529 Query: 97 aaggccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgct 156 ||||||||||||||||||||||| || || || || |||||||| |||| || ||||| Sbjct: 528 aaggccaagatccaggacaaggaagggatcccgccggaccagcagcggctgatctttgcc 469 Query: 157 ggaaagcagttggaagatgg 176 || |||||| |||| ||||| Sbjct: 468 gggaagcagctggaggatgg 449
>gb|AC123736.8| Mus musculus chromosome 3, clone RP23-478I18, complete sequence Length = 189063 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || |||||||| || ||||| ||| Sbjct: 173499 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccattgagaacgtgaag 173558 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 173559 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 173618 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 173619 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtcgac 173674
>ref|XR_004580.1| PREDICTED: Mus musculus gene model 1821, (NCBI) (Gm1821), misc RNA Length = 746 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 353 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 412 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 413 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 472 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| | |||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 473 aagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcgac 528 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 125 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 184 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 185 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 244 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 245 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 297
>ref|XM_974638.1| PREDICTED: Mus musculus similar to polyubiquitin (LOC669363), mRNA Length = 494 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || |||||||| || ||||| ||| Sbjct: 121 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccattgagaacgtgaag 180 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 181 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 240 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 241 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtcgac 296
>ref|XM_992219.1| PREDICTED: Mus musculus similar to polyubiquitin (LOC667759), mRNA Length = 493 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || |||||||| || ||||| ||| Sbjct: 121 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccattgagaacgtgaag 180 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 181 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 240 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 241 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtcgac 296
>ref|XR_005158.1| PREDICTED: Mus musculus ubiquitin pseudogene (LOC218963), misc RNA Length = 493 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || |||||||| || ||||| ||| Sbjct: 121 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccattgagaacgtgaag 180 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 181 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 240 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 241 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtcgac 296
>emb|CR693750.2|CNS0FY8Y Tetraodon nigroviridis full-length cDNA Length = 807 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 29 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 88 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 89 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 148 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 |||||||||| || || | |||| |||||||| ||||||||||| || ||||| Sbjct: 149 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctcca 204 Score = 119 bits (60), Expect = 1e-23 Identities = 113/131 (86%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 485 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 544 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 545 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 604 Query: 166 ttggaagatgg 176 | |||||||| Sbjct: 605 ctagaagatgg 615 Score = 89.7 bits (45), Expect = 1e-14 Identities = 143/176 (81%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || |||||||| || ||||| ||| |||| Sbjct: 257 ggcaaaaccatcaccctcgaggtggagcccagtgacaccattgagaacgtgaagaccaaa 316 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||||||||| || ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 317 atccaggacaaagaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 376 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 | |||||||| || || | | || |||||||| ||||||||||| || ||||| Sbjct: 377 cttgaagatggccgcaccctgtccgactacaacatccagaaagagtccaccctcca 432
>emb|CR685100.2|CNS0FRKO Tetraodon nigroviridis full-length cDNA Length = 793 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 29 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 88 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 89 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 148 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 |||||||||| || || | |||| |||||||| ||||||||||| || ||||| Sbjct: 149 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctcca 204 Score = 111 bits (56), Expect = 3e-21 Identities = 112/131 (85%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| ||||| || |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 484 ggcaaaaccataaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 543 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 544 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 603 Query: 166 ttggaagatgg 176 | |||||||| Sbjct: 604 ctagaagatgg 614 Score = 50.1 bits (25), Expect = 0.009 Identities = 139/176 (78%), Gaps = 1/176 (0%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || |||||||| || ||||| ||| |||| Sbjct: 257 ggcaaaaccatcaccctcgaggtggagcccagtgacaccattgagaacgtgaagaccaaa 316 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||||||||| || | |||||| || ||||| ||||| || |||||||| |||||| Sbjct: 317 atccaggacaaaga-acccctccccctgatcagcagaggctgatctttgctggcaagcag 375 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 | |||||||| || || | | || |||||||| ||||||||||| || ||||| Sbjct: 376 cttgaagatggccgcaccctgtccgactacaacatccagaaagagtccaccctcca 431
>emb|CR678171.2|CNS0FM8F Tetraodon nigroviridis full-length cDNA Length = 815 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 29 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 88 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 89 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 148 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 |||||||||| || || | |||| |||||||| ||||||||||| || ||||| Sbjct: 149 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctcca 204 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 80 acaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccagc 139 ||||||| || ||||| ||||||||||||||||||||||| ||||||||||| || |||| Sbjct: 523 acaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgatcagc 582 Query: 140 aaaggctaatttttgctggaaagcagttggaagatgg 176 | ||||| || |||||||| |||||| | |||||||| Sbjct: 583 agaggctgatctttgctggcaagcagctagaagatgg 619 Score = 65.9 bits (33), Expect = 2e-07 Identities = 108/132 (81%), Gaps = 1/132 (0%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || |||||||| || ||||| ||| |||| Sbjct: 257 ggcaaaaccatcaccctcgaggtggagcccagtgacaccattgagaacgtgaagaccaaa 316 Query: 106 atccaggac-aaggagggcattcccccagaccagcaaaggctaatttttgctggaaagca 164 ||||||||| ||| |||| ||||||| || ||||| ||||| || |||||||| ||||| Sbjct: 317 atccaggacaaagaaggggtttccccctgatcagcagaggctgatctttgctggcaagca 376 Query: 165 gttggaagatgg 176 | | |||||||| Sbjct: 377 gcttgaagatgg 388
>emb|CR664212.2|CNS0FBH6 Tetraodon nigroviridis full-length cDNA Length = 809 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 29 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 88 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 89 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 148 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 |||||||||| || || | |||| |||||||| ||||||||||| || ||||| Sbjct: 149 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctcca 204 Score = 119 bits (60), Expect = 1e-23 Identities = 113/131 (86%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 484 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 543 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 544 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 603 Query: 166 ttggaagatgg 176 | |||||||| Sbjct: 604 ctagaagatgg 614 Score = 56.0 bits (28), Expect = 1e-04 Identities = 106/131 (80%), Gaps = 1/131 (0%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || |||||||| || || |||||| |||| Sbjct: 257 ggcaaaaccatcaccctcgaggtggagcccagtgacaccattgagaatgtcaagaccaaa 316 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||||||||| || | | |||| || || ||||| ||||| || |||||||| |||||| Sbjct: 317 atccaggacaaagaagtc-ttcctcctgatcagcagaggctgatctttgctggcaagcag 375 Query: 166 ttggaagatgg 176 | |||||||| Sbjct: 376 cttgaagatgg 386
>emb|CR634439.2|CNS0EOI5 Tetraodon nigroviridis full-length cDNA Length = 810 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 29 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 88 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 89 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 148 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 |||||||||| || || | |||| |||||||| ||||||||||| || ||||| Sbjct: 149 ctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctcca 204 Score = 119 bits (60), Expect = 1e-23 Identities = 113/131 (86%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 485 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 544 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 545 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 604 Query: 166 ttggaagatgg 176 | |||||||| Sbjct: 605 ctagaagatgg 615 Score = 48.1 bits (24), Expect = 0.036 Identities = 59/71 (83%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || |||||||| || || |||||| |||| Sbjct: 257 ggcaaaaccatcaccctcgaggtggagcccagtgacaccattgagaatgtcaagaccaaa 316 Query: 106 atccaggacaa 116 ||||||||||| Sbjct: 317 atccaggacaa 327
>gb|AC137844.8| Mus musculus, clone RP23-415L22, complete sequence Length = 188189 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || |||||||| || ||||| ||| Sbjct: 143986 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccattgagaacgtgaag 143927 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 143926 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 143867 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 143866 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtcgac 143811
>gb|M96687.1|BVDPP Bovine viral diarrhea virus strain Osloss polyprotein gene, complete cds Length = 12480 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||| ||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 5175 ctgaccggcaggaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 5234 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || Sbjct: 5235 gccaagatccaggataaggaaggcattccccctgaccagcagaggctcatctttgccggc 5294 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || | | ||||||||||||| |||||||||||||| Sbjct: 5295 aagcagctggaagatggccgctctctttctgattacaacatccagaaagagtcgac 5350
>dbj|AK088453.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430018A04 product:ubiquitin polyprotein (heat shock related) (fragment) homolog [Gallus gallus], full insert sequence Length = 704 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| || || ||| Sbjct: 350 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaatgtgaag 409 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 410 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 469 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 470 aagcagctggaagatggccgcactctctctgattacaacatccagaaagagtcgac 525 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 122 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 181 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||| | || ||||| || Sbjct: 182 gccaagatccaggataaagagggcatcccccctgaccagcagagggtgatctttgccggc 241 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 242 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 294
>dbj|AB111967.1| Bovine viral diarrhea virus T-20 gene for poryprotein, partai cds, strain: T-20 Length = 7260 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 4412 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 4471 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 4472 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 4531 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 4532 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 4583
>dbj|AB111966.1| Bovine viral diarrhea virus 190cp gene for poryprotein, partai cds, strain: 190cp Length = 9060 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 5858 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 5917 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 5918 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 5977 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 5978 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 6029
>gb|AY104761.1| Zea mays PCO089720 mRNA sequence Length = 803 Score = 137 bits (69), Expect = 5e-29 Identities = 122/140 (87%) Strand = Plus / Plus Query: 37 acgctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtc 96 |||||||| || ||||||||||| |||||||||||||||| ||||||||||||||| ||| Sbjct: 138 acgctgacagggaagaccatcaccctcgaggtcgagagcagcgacaccatcgacaatgtc 197 Query: 97 aaggccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgct 156 ||||||||||||||||||||||| || || || || |||||||| |||| || ||||| Sbjct: 198 aaggccaagatccaggacaaggaagggatcccgccggaccagcagcggctgatctttgcc 257 Query: 157 ggaaagcagttggaagatgg 176 || |||||| |||| ||||| Sbjct: 258 gggaagcagctggaggatgg 277
>gb|AF104029.1|AF104029 Bovine viral diarrhea virus-2 subgenome D4 polyprotein mRNA, partial cds Length = 1442 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1066 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1125 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1126 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1185 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1186 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1237 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 102 caagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaa 161 ||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || || Sbjct: 899 caagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaa 958 Query: 162 gcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 959 acagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1009
>gb|AF104027.1|AF104027 Bovine viral diarrhea virus-2 subgenome D2 polyprotein mRNA, partial cds Length = 1040 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 664 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 723 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 724 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 783 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 784 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 835
>gb|AF104026.1|AF104026 Bovine viral diarrhea virus-2 subgenome D1 polyprotein mRNA, partial cds Length = 905 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 529 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 588 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 589 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 648 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 649 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 700
>gb|AF104025.1|AF104025 Bovine viral diarrhea virus-2 subgenome C5 polyprotein mRNA, partial cds Length = 1553 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1177 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1236 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1237 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1296 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1297 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1348 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 949 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1008 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1009 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1068 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1069 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1120
>gb|AF104024.1|AF104024 Bovine viral diarrhea virus-2 subgenome C4 polyprotein mRNA, partial cds Length = 1352 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 976 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1035 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1036 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1095 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1096 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1147 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 120 gggcattcccccagaccagcaaaggctaatttttgctggaaagcagttggaagatgggcg 179 |||||| |||||||||||||| ||||| || ||||| || || ||| |||||||||| || Sbjct: 827 gggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaagatggccg 886 Query: 180 aacattagctgattacaacattcagaaagagtc 212 || | |||| |||||||| ||||||||||| Sbjct: 887 caccctgtctgactacaacatccagaaagagtc 919
>gb|AF104023.1|AF104023 Bovine viral diarrhea virus-2 subgenome C3 polyprotein mRNA, partial cds Length = 1184 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 808 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 867 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 868 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 927 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 928 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 979
>gb|AF104022.1|AF104022 Bovine viral diarrhea virus-2 subgenome C2 polyprotein mRNA, partial cds Length = 941 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 565 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 624 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 625 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 684 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 685 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 736
>gb|AF104021.1|AF104021 Bovine viral diarrhea virus-2 subgenome C1 polyprotein mRNA, partial cds Length = 788 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 412 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 471 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 472 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 531 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 532 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 583
>gb|AF104020.1|AF104020 Bovine viral diarrhea virus-2 subgenome B polyprotein mRNA, partial cds Length = 1211 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 835 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 894 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 895 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 954 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 955 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1006 Score = 129 bits (65), Expect = 1e-26 Identities = 145/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 607 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 666 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| ||||||||||||| ||||| || ||||| || | Sbjct: 667 ccaagatccaagacaaagagggcatccccccagaccagcggaggctgatctttgccggga 726 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 727 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 778
>gb|AF104019.1|AF104019 Bovine viral diarrhea virus-2 subgenome A polyprotein mRNA, partial cds Length = 1289 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 913 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 972 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 973 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1032 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1033 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1084
>ref|NR_002875.1| Mus musculus gene model 1821, (NCBI) (Gm1821) on chromosome 14 Length = 704 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| || || ||| Sbjct: 350 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaatgtgaag 409 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 410 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 469 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 470 aagcagctggaagatggccgcactctctctgattacaacatccagaaagagtcgac 525 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 122 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 181 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||| | || ||||| || Sbjct: 182 gccaagatccaggataaagagggcatcccccctgaccagcagagggtgatctttgccggc 241 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||||||||| Sbjct: 242 aagcagctggaagatggccgcaccctctctgattacaacatccagaaagagtc 294
>gb|U84968.1|ATU84968 Arabidopsis thaliana ubiquitin (UBQ11) gene, complete cds Length = 1368 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || || || |||||| ||||||||| ||||||||||||| Sbjct: 935 tgaccggcaagaccatcactcttgaagtggagagctccgacaccattgacaacgtcaagg 994 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||| || || || || |||||||| ||| | || || || || | Sbjct: 995 ccaagatccaggacaaggaaggtatccctccggaccagcagaggttgatcttcgccggta 1054 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | |||||||| ||||| || || || |||||||||||||||||||| ||||| Sbjct: 1055 aacagttggaggatggtcgtaccttggctgattacaacattcagaaggagtc 1106 Score = 103 bits (52), Expect = 7e-19 Identities = 159/195 (81%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| ||||||||||||||||| ||||| Sbjct: 25 accggaaagacaatcaccctcgaggtggaaagctctgacaccatcgacaacgttaaggca 84 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||| || ||||| || || ||||| ||||| || || || |||||| Sbjct: 85 aagatccaggataaggaaggtattcctccggatcagcagaggcttatcttcgccggaaag 144 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 |||||||| ||||| || || || || |||||||| || ||||| || || || ||||| Sbjct: 145 cagttggaggatggccgtacgttggcggattacaatatccagaaggaatccaccctccac 204 Query: 223 ttggtcctgaggctc 237 ||||| || |||||| Sbjct: 205 ttggttctcaggctc 219 Score = 93.7 bits (47), Expect = 7e-16 Identities = 154/190 (81%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||||||||| || || || |||||| ||||||||| |||||||| |||| Sbjct: 1163 tgaccggaaagaccatcactcttgaagttgagagctccgacaccattgacaacgtgaagg 1222 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 | ||||||||||||||||| || || || || |||||||| | || || || ||||||| Sbjct: 1223 ctaagatccaggacaaggaaggtatccctccggaccagcagcgtctcatcttcgctggaa 1282 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || || || || |||||||| ||||| ||||| || || | Sbjct: 1283 agcagcttgaggatggacgtactttggccgactacaacatccagaaggagtctactcttc 1342 Query: 221 atttggtcct 230 | |||||||| Sbjct: 1343 acttggtcct 1352 Score = 91.7 bits (46), Expect = 3e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| ||||||||||||||||||||||| || |||||||| ||||| || |||||| Sbjct: 289 gacaccattgacaacgtcaaggccaagatccaagataaggagggtattcctccggaccag 348 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgg 176 || ||| | || || || |||||||||||||| ||||| Sbjct: 349 cagaggttgatcttcgccggaaagcagttggaggatgg 386 Score = 83.8 bits (42), Expect = 7e-13 Identities = 149/185 (80%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| | ||||| |||||| |||||||| |||||||| |||||| Sbjct: 709 accggaaagactatcactttggaggtagagagctctgacaccattgacaacgtgaaggcc 768 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||| ||||| || || |||||||| ||| | || ||||| |||||| Sbjct: 769 aagatccaggataaggaaggcatccctccggaccagcagaggttgatctttgccggaaag 828 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 || | || || || |||| || || ||||||||||| ||||| ||||| || || ||| Sbjct: 829 caacttgaggacggcagaactttggcggattacaacatccagaaggagtctacacttcat 888 Query: 223 ttggt 227 ||||| Sbjct: 889 ttggt 893 Score = 75.8 bits (38), Expect = 2e-10 Identities = 122/150 (81%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||| ||||| || || ||||| || |||||| Sbjct: 517 gacaccatcgacaacgtcaaggccaagatccaagacaaagaaggtattcctccggaccag 576 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || || | || || || ||||| || | || ||||| |||| || || || |||||| Sbjct: 577 cagagattgatcttcgccggaaaacaacttgaggatggcagaactttggccgactacaac 636 Query: 199 attcagaaagagtcgacgctccatttggtc 228 |||||||| ||||| || ||||| |||||| Sbjct: 637 attcagaaggagtccacactccacttggtc 666
>gb|L13783.1|BVDP125A Bovine viral diarrhea virus p125 protein gene, partial cds Length = 3163 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1061 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1120 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1121 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1180 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 | ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1181 aacagctggaagatggccgcaccctgtctgactacaacatccagaaagagtc 1232 Score = 129 bits (65), Expect = 1e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| || ||||||||||| |||||||||| Sbjct: 1289 tgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaagg 1348 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| || | Sbjct: 1349 ccaagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccggga 1408 Query: 161 agcagttggaagatgg 176 | ||| |||||||||| Sbjct: 1409 aacagctggaagatgg 1424
>gb|M87812.1|BVDMSEQH Bovine viral diarrhea virus mRNA sequence Length = 768 Score = 137 bits (69), Expect = 5e-29 Identities = 149/176 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || || || ||| || ||||||||||| ||||| ||| Sbjct: 303 ctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgagaacgtgaag 362 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||| ||||||||||| |||||||| ||||| | ||||| || Sbjct: 363 gccaagatccaggataaggaaggcattccccctgaccagcagaggcttacctttgccggc 422 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| |||||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 423 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcgac 478
>gb|M74156.1|TOBUBI4A Nicotiana sylvestris (clone 6PU4) pentameric polyubiquitin (ubi4) mRNA, complete cds Length = 1321 Score = 137 bits (69), Expect = 5e-29 Identities = 146/172 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| || |||||||| || ||||| || ||| ||||| ||||||||||| |||| Sbjct: 696 tgaccgggaaaaccatcactcttgaggtggaaagctctgacactatcgacaacgttaagg 755 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 | ||||||||||| |||||||| || || ||||| ||||||||||| || |||||||| | Sbjct: 756 cgaagatccaggataaggagggtatcccaccagatcagcaaaggctgatctttgctggta 815 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||||||||||||| ||||| | |||||||||||||| ||||| ||||| Sbjct: 816 agcagttggaagatggccgaacccttgctgattacaacatccagaaggagtc 867 Score = 115 bits (58), Expect = 2e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 78 cgacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagacca 137 |||||| || ||||| || ||||| || |||||||| |||||||| || || |||||||| Sbjct: 505 cgacactattgacaatgttaaggctaaaatccaggataaggagggaatcccaccagacca 564 Query: 138 gcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaa 197 ||||||| | ||||||||||| ||||| ||||||||||| | || |||||||||||||| Sbjct: 565 gcaaaggttgatttttgctggtaagcaattggaagatggaaggaccttagctgattacaa 624 Query: 198 cattcagaaagagtcgac 215 |||||||| |||||||| Sbjct: 625 tattcagaaggagtcgac 642 Score = 105 bits (53), Expect = 2e-19 Identities = 128/153 (83%) Strand = Plus / Plus Query: 78 cgacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagacca 137 |||||| ||||||||||| ||||| ||||| |||||||||||||| || || |||||||| Sbjct: 277 cgacactatcgacaacgttaaggctaagattcaggacaaggagggaatcccaccagacca 336 Query: 138 gcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaa 197 ||||||| | ||||| || |||||||| | ||||| || |||| ||||||||||||| Sbjct: 337 gcaaaggttgattttcgccggaaagcaactcgaagacggcagaaccctagctgattacaa 396 Query: 198 cattcagaaagagtcgacgctccatttggtcct 230 ||| ||||| || ||||| || || |||||||| Sbjct: 397 catccagaaggaatcgacccttcacttggtcct 429 Score = 103 bits (52), Expect = 7e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 88 gacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccagcaaaggcta 147 ||||| || ||||| ||||| |||||||||||||| |||||||| || ||||| ||||| Sbjct: 971 gacaatgtgaaggctaagattcaggacaaggagggtattcccccggatcagcagaggctg 1030 Query: 148 atttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaa 207 ||||||||||| ||||||||||||||||| |||| | || ||||| ||||| ||||| Sbjct: 1031 atttttgctgggaagcagttggaagatggaagaactctggcggattataacatccagaag 1090 Query: 208 gagtcgac 215 |||||||| Sbjct: 1091 gagtcgac 1098
>ref|NM_178970.2| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.4 mRNA, complete cds Length = 1624 Score = 135 bits (68), Expect = 2e-28 Identities = 163/195 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| |||||||||||||||||| |||||| Sbjct: 75 accggaaagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggcc 134 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| |||||||||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 135 aagatccaggataaggagggcattcctccggatcagcagaggcttattttcgccggcaag 194 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || || ||||||||||| || ||||| || || || ||||| Sbjct: 195 cagctagaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 254 Query: 223 ttggtcctgaggctc 237 |||||||| |||||| Sbjct: 255 ttggtcctcaggctc 269 Score = 107 bits (54), Expect = 5e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 339 gacaccatcgacaacgtcaaggccaagatccaagacaaagagggtattcctccggaccag 398 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgg 176 || ||||| || || || |||||||||||||| ||||| Sbjct: 399 cagaggctgatcttcgccggaaagcagttggaggatgg 436 Score = 103 bits (52), Expect = 7e-19 Identities = 157/191 (82%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||||||||| || || || || ||| ||||||||| ||||||||||||| Sbjct: 1213 tgaccggaaagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaagg 1272 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||| || ||||| || |||||||| | || || || ||||||| Sbjct: 1273 ccaagatccaggacaagga-ggtattcctccggaccagcagcgtctcatcttcgctggaa 1331 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || || || || |||||||| ||||| ||||| || || | Sbjct: 1332 agcagcttgaggatggacgtactttggccgactacaacatccagaaggagtctactcttc 1391 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 1392 acttggtcctg 1402 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| | ||||| |||||| |||||||| |||||||| |||||| Sbjct: 987 accggaaagactatcactttggaggtagagagctctgacaccattgacaacgtgaaggcc 1046 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||| || || || || |||||||| ||| | || ||||| ||||| Sbjct: 1047 aagatccaggataaggaaggaatccctccggaccagcagaggttgatctttgccggaaaa 1106 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 || ||||| ||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 1107 caattggaggatggtcgtactttggcggattacaacatccagaaggagtcgac 1159 Score = 69.9 bits (35), Expect = 1e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||||||||| | ||||| ||||| |||||||| || ||||| || ||| Sbjct: 759 accggaaagaccatcactttggaggtggagagttctgacaccattgataacgtgaaagcc 818 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||||||||| ||||| || || || |||||||| || | || || || |||||| Sbjct: 819 aagatccaggacaaagagggtatcccaccggaccagcagagattgatcttcgccggaaag 878 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || | |||||||| |||| || ||||| |||||||||||||| ||||| Sbjct: 879 caacttgaagatggaagaactttggctgactacaacattcagaaggagtc 928 Score = 60.0 bits (30), Expect = 1e-05 Identities = 120/150 (80%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| || ||||| || ||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 567 gacaccattgataacgtgaaagccaagatccaagacaaagagggtattcctccggaccag 626 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || || | || || || ||||| || | |||||||| |||| || || || |||||| Sbjct: 627 cagagattgatcttcgccggaaaacaacttgaagatggcagaactttggccgactacaac 686 Query: 199 attcagaaagagtcgacgctccatttggtc 228 |||||||| ||||| || ||||| |||||| Sbjct: 687 attcagaaggagtccacactccacttggtc 716
>ref|NM_202787.1| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.5 mRNA, complete cds Length = 1203 Score = 135 bits (68), Expect = 2e-28 Identities = 163/195 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| |||||||||||||||||| |||||| Sbjct: 110 accggaaagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggcc 169 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| |||||||||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 170 aagatccaggataaggagggcattcctccggatcagcagaggcttattttcgccggcaag 229 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || || ||||||||||| || ||||| || || || ||||| Sbjct: 230 cagctagaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 289 Query: 223 ttggtcctgaggctc 237 |||||||| |||||| Sbjct: 290 ttggtcctcaggctc 304 Score = 103 bits (52), Expect = 7e-19 Identities = 157/191 (82%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||||||||| || || || || ||| ||||||||| ||||||||||||| Sbjct: 792 tgaccggaaagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaagg 851 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||| || ||||| || |||||||| | || || || ||||||| Sbjct: 852 ccaagatccaggacaagga-ggtattcctccggaccagcagcgtctcatcttcgctggaa 910 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || || || || |||||||| ||||| ||||| || || | Sbjct: 911 agcagcttgaggatggacgtactttggccgactacaacatccagaaggagtctactcttc 970 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 971 acttggtcctg 981 Score = 99.6 bits (50), Expect = 1e-17 Identities = 113/134 (84%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 374 gacaccatcgacaacgtcaaggccaagatccaagacaaagagggtattcctccggaccag 433 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || || | || || || |||||||| | |||||||| |||| || ||||| |||||| Sbjct: 434 cagagattgatcttcgccggaaagcaacttgaagatggaagaactttggctgactacaac 493 Query: 199 attcagaaagagtc 212 |||||||| ||||| Sbjct: 494 attcagaaggagtc 507 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| | ||||| |||||| |||||||| |||||||| |||||| Sbjct: 566 accggaaagactatcactttggaggtagagagctctgacaccattgacaacgtgaaggcc 625 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||| || || || || |||||||| ||| | || ||||| ||||| Sbjct: 626 aagatccaggataaggaaggaatccctccggaccagcagaggttgatctttgccggaaaa 685 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 || ||||| ||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 686 caattggaggatggtcgtactttggcggattacaacatccagaaggagtcgac 738
>ref|NM_178969.1| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.3 mRNA, complete cds Length = 1431 Score = 135 bits (68), Expect = 2e-28 Identities = 163/195 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| |||||||||||||||||| |||||| Sbjct: 110 accggaaagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggcc 169 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| |||||||||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 170 aagatccaggataaggagggcattcctccggatcagcagaggcttattttcgccggcaag 229 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || || ||||||||||| || ||||| || || || ||||| Sbjct: 230 cagctagaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 289 Query: 223 ttggtcctgaggctc 237 |||||||| |||||| Sbjct: 290 ttggtcctcaggctc 304 Score = 103 bits (52), Expect = 7e-19 Identities = 157/191 (82%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||||||||| || || || || ||| ||||||||| ||||||||||||| Sbjct: 1020 tgaccggaaagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaagg 1079 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||| || ||||| || |||||||| | || || || ||||||| Sbjct: 1080 ccaagatccaggacaagga-ggtattcctccggaccagcagcgtctcatcttcgctggaa 1138 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || || || || |||||||| ||||| ||||| || || | Sbjct: 1139 agcagcttgaggatggacgtactttggccgactacaacatccagaaggagtctactcttc 1198 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 1199 acttggtcctg 1209 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| | ||||| |||||| |||||||| |||||||| |||||| Sbjct: 794 accggaaagactatcactttggaggtagagagctctgacaccattgacaacgtgaaggcc 853 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||| || || || || |||||||| ||| | || ||||| ||||| Sbjct: 854 aagatccaggataaggaaggaatccctccggaccagcagaggttgatctttgccggaaaa 913 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 || ||||| ||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 914 caattggaggatggtcgtactttggcggattacaacatccagaaggagtcgac 966 Score = 91.7 bits (46), Expect = 3e-15 Identities = 124/150 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 374 gacaccatcgacaacgtcaaggccaagatccaagacaaagagggtattcctccggaccag 433 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || || | || || || ||||| || | |||||||| |||| || || || |||||| Sbjct: 434 cagagattgatcttcgccggaaaacaacttgaagatggcagaactttggccgactacaac 493 Query: 199 attcagaaagagtcgacgctccatttggtc 228 |||||||| ||||| || ||||| |||||| Sbjct: 494 attcagaaggagtccacactccacttggtc 523 Score = 69.9 bits (35), Expect = 1e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||||||||| | ||||| ||||| |||||||| || ||||| || ||| Sbjct: 566 accggaaagaccatcactttggaggtggagagttctgacaccattgataacgtgaaagcc 625 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||||||||| ||||| || || || |||||||| || | || || || |||||| Sbjct: 626 aagatccaggacaaagagggtatcccaccggaccagcagagattgatcttcgccggaaag 685 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || | |||||||| |||| || ||||| |||||||||||||| ||||| Sbjct: 686 caacttgaagatggaagaactttggctgactacaacattcagaaggagtc 735
>ref|NM_116771.2| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.1 mRNA, complete cds Length = 1431 Score = 135 bits (68), Expect = 2e-28 Identities = 163/195 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| |||||||||||||||||| |||||| Sbjct: 110 accggaaagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggcc 169 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| |||||||||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 170 aagatccaggataaggagggcattcctccggatcagcagaggcttattttcgccggcaag 229 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || || ||||||||||| || ||||| || || || ||||| Sbjct: 230 cagctagaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 289 Query: 223 ttggtcctgaggctc 237 |||||||| |||||| Sbjct: 290 ttggtcctcaggctc 304 Score = 107 bits (54), Expect = 5e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 374 gacaccatcgacaacgtcaaggccaagatccaagacaaagagggtattcctccggaccag 433 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgg 176 || ||||| || || || |||||||||||||| ||||| Sbjct: 434 cagaggctgatcttcgccggaaagcagttggaggatgg 471 Score = 103 bits (52), Expect = 7e-19 Identities = 157/191 (82%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||||||||| || || || || ||| ||||||||| ||||||||||||| Sbjct: 1020 tgaccggaaagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaagg 1079 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||| || ||||| || |||||||| | || || || ||||||| Sbjct: 1080 ccaagatccaggacaagga-ggtattcctccggaccagcagcgtctcatcttcgctggaa 1138 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || || || || |||||||| ||||| ||||| || || | Sbjct: 1139 agcagcttgaggatggacgtactttggccgactacaacatccagaaggagtctactcttc 1198 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 1199 acttggtcctg 1209 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| | ||||| |||||| |||||||| |||||||| |||||| Sbjct: 794 accggaaagactatcactttggaggtagagagctctgacaccattgacaacgtgaaggcc 853 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||| || || || || |||||||| ||| | || ||||| ||||| Sbjct: 854 aagatccaggataaggaaggaatccctccggaccagcagaggttgatctttgccggaaaa 913 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 || ||||| ||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 914 caattggaggatggtcgtactttggcggattacaacatccagaaggagtcgac 966 Score = 67.9 bits (34), Expect = 4e-08 Identities = 109/134 (81%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| || ||||| || ||||||||||||||||| ||||| || || || |||||| Sbjct: 602 gacaccattgataacgtgaaagccaagatccaggacaaagagggtatcccaccggaccag 661 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || || | || || || |||||||| | |||||||| |||| || ||||| |||||| Sbjct: 662 cagagattgatcttcgccggaaagcaacttgaagatggaagaactttggctgactacaac 721 Query: 199 attcagaaagagtc 212 |||||||| ||||| Sbjct: 722 attcagaaggagtc 735
>ref|NM_178968.1| Arabidopsis thaliana UBQ10 (POLYUBIQUITIN 10); protein binding AT4G05320 (UBQ10) transcript variant AT4G05320.2 mRNA, complete cds Length = 1834 Score = 135 bits (68), Expect = 2e-28 Identities = 163/195 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| |||||||||||||||||| |||||| Sbjct: 110 accggaaagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggcc 169 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| |||||||||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 170 aagatccaggataaggagggcattcctccggatcagcagaggcttattttcgccggcaag 229 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || || ||||||||||| || ||||| || || || ||||| Sbjct: 230 cagctagaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 289 Query: 223 ttggtcctgaggctc 237 |||||||| |||||| Sbjct: 290 ttggtcctcaggctc 304 Score = 107 bits (54), Expect = 5e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 374 gacaccatcgacaacgtcaaggccaagatccaagacaaagagggtattcctccggaccag 433 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgg 176 || ||||| || || || |||||||||||||| ||||| Sbjct: 434 cagaggctgatcttcgccggaaagcagttggaggatgg 471 Score = 103 bits (52), Expect = 7e-19 Identities = 157/191 (82%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||||||||| || || || || ||| ||||||||| ||||||||||||| Sbjct: 1248 tgaccggaaagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaagg 1307 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||| || ||||| || |||||||| | || || || ||||||| Sbjct: 1308 ccaagatccaggacaagga-ggtattcctccggaccagcagcgtctcatcttcgctggaa 1366 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || || || || |||||||| ||||| ||||| || || | Sbjct: 1367 agcagcttgaggatggacgtactttggccgactacaacatccagaaggagtctactcttc 1426 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 1427 acttggtcctg 1437 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| | ||||| |||||| |||||||| |||||||| |||||| Sbjct: 1022 accggaaagactatcactttggaggtagagagctctgacaccattgacaacgtgaaggcc 1081 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||| || || || || |||||||| ||| | || ||||| ||||| Sbjct: 1082 aagatccaggataaggaaggaatccctccggaccagcagaggttgatctttgccggaaaa 1141 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 || ||||| ||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 1142 caattggaggatggtcgtactttggcggattacaacatccagaaggagtcgac 1194 Score = 69.9 bits (35), Expect = 1e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||||||||| | ||||| ||||| |||||||| || ||||| || ||| Sbjct: 794 accggaaagaccatcactttggaggtggagagttctgacaccattgataacgtgaaagcc 853 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||||||||| ||||| || || || |||||||| || | || || || |||||| Sbjct: 854 aagatccaggacaaagagggtatcccaccggaccagcagagattgatcttcgccggaaag 913 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || | |||||||| |||| || ||||| |||||||||||||| ||||| Sbjct: 914 caacttgaagatggaagaactttggctgactacaacattcagaaggagtc 963 Score = 60.0 bits (30), Expect = 1e-05 Identities = 120/150 (80%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| || ||||| || ||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 602 gacaccattgataacgtgaaagccaagatccaagacaaagagggtattcctccggaccag 661 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || || | || || || ||||| || | |||||||| |||| || || || |||||| Sbjct: 662 cagagattgatcttcgccggaaaacaacttgaagatggcagaactttggccgactacaac 721 Query: 199 attcagaaagagtcgacgctccatttggtc 228 |||||||| ||||| || ||||| |||||| Sbjct: 722 attcagaaggagtccacactccacttggtc 751
>ref|NM_122069.2| Arabidopsis thaliana UBQ4; protein binding AT5G20620 (UBQ4) mRNA, complete cds Length = 1488 Score = 135 bits (68), Expect = 2e-28 Identities = 151/179 (84%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| |||||||| |||||| |||||||||||||| || ||||| |||||| Sbjct: 126 aagaccatcactctcgaggttgagagctctgacaccatcgacaatgttaaggcaaagatc 185 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 ||||||||||| |||||||| || ||||||||||| | || || ||||| |||||| | Sbjct: 186 caggacaaggaaggcattcctcctgaccagcaaagattgatcttcgctggtaagcagcta 245 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggt 227 |||||||| || || || |||||||||||||| |||||||| || || ||||| ||||| Sbjct: 246 gaagatggccgcaccttggctgattacaacatccagaaagaatcaacactccacttggt 304 Score = 83.8 bits (42), Expect = 7e-13 Identities = 143/177 (80%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||| ||||| | ||||| |||||| ||||| ||||| || |||||||| ||| Sbjct: 807 ggcaagactatcactttggaggttgagagctcagacacaatcgataatgtcaaggcaaag 866 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 || || |||||||| || ||||| ||||| ||||| || || || ||||||||||| ||| Sbjct: 867 attcaagacaaggaagggattccaccagatcagcagagactcatatttgctggaaaacag 926 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 | |||||||| || ||| | |||||||||||||| || || ||||| || |||||| Sbjct: 927 cttgaagatggacgcacactcgctgattacaacatccaaaaggagtctaccctccat 983 Score = 83.8 bits (42), Expect = 7e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| || |||||||||||||| ||||||||||||||||| || || || || |||||| Sbjct: 384 gacactattgacaacgtcaaggcaaagatccaggacaaggaaggaatccctccggaccag 443 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgg 176 ||||| || ||||| ||||| |||||| | |||||||| Sbjct: 444 caaagacttattttcgctggtaagcagcttgaagatgg 481 Score = 67.9 bits (34), Expect = 4e-08 Identities = 138/173 (79%) Strand = Plus / Plus Query: 55 atcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatccaggac 114 ||||| || ||||| |||||| |||||||| ||||| ||||| || |||||||| || Sbjct: 588 atcacccttgaggttgagagctcagacaccattgacaatgtcaaagctaagatccaagat 647 Query: 115 aaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttggaagat 174 || ||||| || || || |||||||| ||||| || ||||| || |||||| | || ||| Sbjct: 648 aaagagggaatcccaccggaccagcagaggcttatctttgccggtaagcagctagaggat 707 Query: 175 gggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggt 227 || || || | |||||||||||||| || |||||||| || || |||||||| Sbjct: 708 ggtcgcactcttgctgattacaacatccaaaaagagtcaacccttcatttggt 760 Score = 44.1 bits (22), Expect = 0.57 Identities = 97/122 (79%) Strand = Plus / Plus Query: 94 gtcaaggccaagatccaggacaaggagggcattcccccagaccagcaaaggctaattttt 153 |||||||| ||||| ||||||||||| || || || || ||||| || || || || || Sbjct: 1083 gtcaaggctaagattcaggacaaggaagggatcccaccggaccaacagagactcatcttc 1142 Query: 154 gctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcg 213 ||||| |||||| | || ||||| || || | || ||||||||||| ||||| |||||| Sbjct: 1143 gctgggaagcagcttgaggatggtcggactcttgcagattacaacatccagaaggagtcg 1202 Query: 214 ac 215 || Sbjct: 1203 ac 1204
>ref|XM_506723.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ9003_G05.28 mRNA Length = 1642 Score = 135 bits (68), Expect = 2e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||| |||||| ||||||||||||||||||||||||||| Sbjct: 1022 ggcaagaccatcaccctggaggttgagagctcggacaccatcgacaacgtcaaggccaag 1081 Query: 106 atccaggacaaggagggcattcccccagaccagca 140 |||||||||||||||||||| |||||||||||||| Sbjct: 1082 atccaggacaaggagggcatccccccagaccagca 1116 Score = 125 bits (63), Expect = 2e-25 Identities = 152/182 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||| ||| || ||||||||||| |||||| Sbjct: 788 ctgaccggcaagaccatcaccctcgaggtggagtcttctgataccatcgacaatgtcaag 847 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||||||||| |||||||| | || || |||||||| Sbjct: 848 gccaagatccaggacaaggagggcattcccccggaccagcagcgcctcatctttgctggc 907 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||| ||||| | || | ||||| |||||||| ||||| ||||| || ||| Sbjct: 908 aagcagctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctc 967 Query: 220 ca 221 || Sbjct: 968 ca 969 Score = 125 bits (63), Expect = 2e-25 Identities = 94/102 (92%), Gaps = 2/102 (1%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcanc-gacaccatcgacaacgtcaa 98 |||||||||||||||||||| |||||||| || | | | |||||||||||||||||||| Sbjct: 560 ctgaccggcaagaccatcaccctcgaggtgga-atcttctgacaccatcgacaacgtcaa 618 Query: 99 ggccaagatccaggacaaggagggcattcccccagaccagca 140 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 619 ggccaagatccaggacaaggagggcattcccccggaccagca 660 Score = 107 bits (54), Expect = 5e-20 Identities = 60/62 (96%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 371 gacaccatcgacaacgtcaaggccaagatccaggacaaagagggcatccccccagaccag 430 Query: 139 ca 140 || Sbjct: 431 ca 432 Score = 99.6 bits (50), Expect = 1e-17 Identities = 142/173 (82%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| | ||||| |||||| ||||||||| || || || |||||||||||| Sbjct: 1253 aagaccatcactttggaggttgagagctccgacaccattgataatgtgaaggccaagatc 1312 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||||||||| ||||||||||||||||| | || || || ||||| |||||| || Sbjct: 1313 caggacaaggaggggattcccccagaccagcagcgtctgatcttcgctggcaagcagctg 1372 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 || ||||| || || | || || |||||||| ||||| ||||| || ||||| Sbjct: 1373 gaggatggacgcaccctcgccgactacaacatccagaaggagtccaccctcca 1425 Score = 87.7 bits (44), Expect = 4e-14 Identities = 142/175 (81%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||| ||||| |||||||| ||| | ||||||||||| || ||||||| Sbjct: 105 tgaccggcaagactatcaccctcgaggtggagtcctctgacaccatcgataatgtcaagg 164 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 | |||||||| || ||||||||||| ||||| |||||||| | || || || ||||| | Sbjct: 165 ctaagatccaagataaggagggcatccccccggaccagcagcgtctcatcttcgctggca 224 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 ||||| |||| ||||| | || | ||||| |||||||| ||||| |||||||| Sbjct: 225 agcagctggaggatggcaggacccttgctgactacaacatccagaaggagtcgac 279
>ref|XM_464194.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1640 Score = 135 bits (68), Expect = 2e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||| |||||| ||||||||||||||||||||||||||| Sbjct: 1019 ggcaagaccatcaccctggaggttgagagctcggacaccatcgacaacgtcaaggccaag 1078 Query: 106 atccaggacaaggagggcattcccccagaccagca 140 |||||||||||||||||||| |||||||||||||| Sbjct: 1079 atccaggacaaggagggcatccccccagaccagca 1113 Score = 125 bits (63), Expect = 2e-25 Identities = 152/182 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||| ||| || ||||||||||| |||||| Sbjct: 785 ctgaccggcaagaccatcaccctcgaggtggagtcttctgataccatcgacaatgtcaag 844 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||||||||| |||||||| | || || |||||||| Sbjct: 845 gccaagatccaggacaaggagggcattcccccggaccagcagcgcctcatctttgctggc 904 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||| ||||| | || | ||||| |||||||| ||||| ||||| || ||| Sbjct: 905 aagcagctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctc 964 Query: 220 ca 221 || Sbjct: 965 ca 966 Score = 125 bits (63), Expect = 2e-25 Identities = 94/102 (92%), Gaps = 2/102 (1%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcanc-gacaccatcgacaacgtcaa 98 |||||||||||||||||||| |||||||| || | | | |||||||||||||||||||| Sbjct: 557 ctgaccggcaagaccatcaccctcgaggtgga-atcttctgacaccatcgacaacgtcaa 615 Query: 99 ggccaagatccaggacaaggagggcattcccccagaccagca 140 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 616 ggccaagatccaggacaaggagggcattcccccggaccagca 657 Score = 107 bits (54), Expect = 5e-20 Identities = 60/62 (96%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 368 gacaccatcgacaacgtcaaggccaagatccaggacaaagagggcatccccccagaccag 427 Query: 139 ca 140 || Sbjct: 428 ca 429 Score = 99.6 bits (50), Expect = 1e-17 Identities = 142/173 (82%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| | ||||| |||||| ||||||||| || || || |||||||||||| Sbjct: 1250 aagaccatcactttggaggttgagagctccgacaccattgataatgtgaaggccaagatc 1309 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||||||||| ||||||||||||||||| | || || || ||||| |||||| || Sbjct: 1310 caggacaaggaggggattcccccagaccagcagcgtctgatcttcgctggcaagcagctg 1369 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 || ||||| || || | || || |||||||| ||||| ||||| || ||||| Sbjct: 1370 gaggatggacgcaccctcgccgactacaacatccagaaggagtccaccctcca 1422 Score = 87.7 bits (44), Expect = 4e-14 Identities = 142/175 (81%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||| ||||| |||||||| ||| | ||||||||||| || ||||||| Sbjct: 102 tgaccggcaagactatcaccctcgaggtggagtcctctgacaccatcgataatgtcaagg 161 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 | |||||||| || ||||||||||| ||||| |||||||| | || || || ||||| | Sbjct: 162 ctaagatccaagataaggagggcatccccccggaccagcagcgtctcatcttcgctggca 221 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 ||||| |||| ||||| | || | ||||| |||||||| ||||| |||||||| Sbjct: 222 agcagctggaggatggcaggacccttgctgactacaacatccagaaggagtcgac 276
>emb|CR731853.1|CNS0GRN6 Tetraodon nigroviridis full-length cDNA Length = 877 Score = 135 bits (68), Expect = 2e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 554 ggcaagaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 613 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 614 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 673 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 674 ctggaagatgg 684 Score = 119 bits (60), Expect = 1e-23 Identities = 113/131 (86%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 326 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 385 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 386 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 445 Query: 166 ttggaagatgg 176 | |||||||| Sbjct: 446 cttgaagatgg 456 Score = 103 bits (52), Expect = 7e-19 Identities = 111/131 (84%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||| ||| || ||||| ||||||||| Sbjct: 98 ggcaaaaccatcaccctcgaggtggagcccagcgacatcattgagaacgtgaaggccaag 157 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || ||||| || |||||| Sbjct: 158 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgccggcaagcag 217 Query: 166 ttggaagatgg 176 | |||||||| Sbjct: 218 cttgaagatgg 228
>gb|BC008955.2| Homo sapiens ubiquitin C, mRNA (cDNA clone IMAGE:3030313), partial cds Length = 1728 Score = 135 bits (68), Expect = 2e-28 Identities = 142/167 (85%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||||||||| |||||||| || ||| Sbjct: 297 ggcaagaccatcacccttgaggtcgagcccagtgacaccatcgagaacgtcaaagcaaag 356 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 357 atccaggacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 416 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 417 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 463 Score = 119 bits (60), Expect = 1e-23 Identities = 140/167 (83%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||| ||||| |||||||| || ||| Sbjct: 753 ggcaagaccatcacccttgaggtcgagcccagtgacactatcgagaacgtcaaagcaaag 812 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||| |||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 813 atccaagacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 872 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 873 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 919 Score = 115 bits (58), Expect = 2e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 63 ctgactggtaagaccatcaccctcgaggttgagcccagtgacaccatcgagaatgtcaag 122 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || |||||||| ||||| || ||||||||| Sbjct: 123 gcaaagatccaagataaggaaggcatccctcctgaccagcagaggctgatctttgctgga 182 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 183 aaacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 235 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 519 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 578 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| |||||||| || || ||||| ||| | || ||||| ||| Sbjct: 579 gcaaagatccaagataaggaaggcattcctcctgatcagcagaggttgatctttgccgga 638 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 639 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 691 Score = 89.7 bits (45), Expect = 1e-14 Identities = 155/192 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 1431 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 1490 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || || ||||| ||| | || |||||||| Sbjct: 1491 gcaaagatccaagataaggaaggcatccctcctgatcagcagaggttgatctttgctggg 1550 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 || ||| |||||||||| || || | |||| |||||||| ||||||||||| || || Sbjct: 1551 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtccactctg 1610 Query: 220 catttggtcctg 231 || ||||||||| Sbjct: 1611 cacttggtcctg 1622 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 1203 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1262 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1263 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1322 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1323 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1375 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 975 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1034 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || ||||| ||| Sbjct: 1035 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgccgga 1094 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1095 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 1147
>emb|CR704595.2|CNS0G6M7 Tetraodon nigroviridis full-length cDNA Length = 808 Score = 135 bits (68), Expect = 2e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 486 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 545 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||||||||| ||||| ||||| || |||||||| |||||| Sbjct: 546 atccaggacaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcag 605 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 606 ctggaagatgg 616 Score = 97.6 bits (49), Expect = 4e-17 Identities = 112/132 (84%), Gaps = 1/132 (0%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || |||| ||||||||| Sbjct: 29 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgaggacgtgaaggccaag 88 Query: 106 atccaggacaaggagggcatt-cccccagaccagcaaaggctaatttttgctggaaagca 164 |||||||||||||| |||||| ||||| || ||||| ||| | || |||||||| ||||| Sbjct: 89 atccaggacaaggaaggcattcccccctgatcagcagaggatgatctttgctggcaagca 148 Query: 165 gttggaagatgg 176 | |||||||||| Sbjct: 149 gctggaagatgg 160 Score = 79.8 bits (40), Expect = 1e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| || ||||| ||| || | ||||||| || |||||||||||||| Sbjct: 258 ggcaaaaccatcactcttgaggtggagcccagcaacaccattgagaacgtcaaggccaaa 317 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||||||||| || || ||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 318 atccaggacaaagaaggttttccccctgatcagcagaggctgatctttgctggcaagcag 377 Query: 166 ttggaagatgg 176 ||||||||| Sbjct: 378 ccggaagatgg 388
>emb|CR704024.2|CNS0G66C Tetraodon nigroviridis full-length cDNA Length = 804 Score = 135 bits (68), Expect = 2e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 484 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 543 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||||||||| ||||| ||||| || |||||||| |||||| Sbjct: 544 atccaggacaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcag 603 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 604 ctggaagatgg 614 Score = 127 bits (64), Expect = 5e-26 Identities = 114/131 (87%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 29 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 88 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 89 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 148 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 149 ctggaagatgg 159 Score = 63.9 bits (32), Expect = 6e-07 Identities = 107/131 (81%), Gaps = 1/131 (0%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| || ||||| ||| || | ||||||| || ||||||||| |||| Sbjct: 257 ggcaaaaccatcactcttgaggtggagcccagctacaccattgagaacgtcaagaccaaa 316 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||||||||| | | || |||||| || ||||| ||||| || |||||||| |||||| Sbjct: 317 atccaggacaaag-gagcggtccccctgatcagcagaggctgatctttgctggcaagcag 375 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 376 ctggaagatgg 386
>emb|CR703290.2|CNS0G5LY Tetraodon nigroviridis full-length cDNA Length = 527 Score = 135 bits (68), Expect = 2e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 201 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 260 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||||||||| ||||| ||||| || |||||||| |||||| Sbjct: 261 atccaggacaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcag 320 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 321 ctggaagatgg 331 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 78 cgacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagacca 137 ||||||||| || ||||||||| |||| ||||||||||| || ||||||||||| || || Sbjct: 5 cgacaccattgagaacgtcaagaccaaaatccaggacaaagaaggcattccccctgatca 64 Query: 138 gcaaaggctaatttttgctggaaagcagttggaagatgg 176 ||| ||||| || |||||||| |||||| |||||||||| Sbjct: 65 gcagaggctgatctttgctggcaagcagctggaagatgg 103
>emb|CR699785.2|CNS0G2WL Tetraodon nigroviridis full-length cDNA Length = 800 Score = 135 bits (68), Expect = 2e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 484 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 543 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||||||||| ||||| ||||| || |||||||| |||||| Sbjct: 544 atccaggacaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcag 603 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 604 ctggaagatgg 614 Score = 103 bits (52), Expect = 7e-19 Identities = 111/131 (84%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||| |||| Sbjct: 256 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaagaccaaa 315 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 316 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 375 Query: 166 ttggaagatgg 176 | |||||||| Sbjct: 376 cttgaagatgg 386 Score = 79.8 bits (40), Expect = 1e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| ||||| || |||||||| ||| || | ||||||| || ||| | ||||||||| Sbjct: 29 ggcaaaaccataaccctcgaggtggagcccagcaacaccattgagaacttgaaggccaag 88 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||||||||||| |||||| ||||| || ||||| ||||| || |||| || |||||| Sbjct: 89 atccaggacaaggggggcatcccccctgatcagcagaggctgatctttgttgtcaagcag 148 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 149 ctggaagatgg 159
>emb|CR696292.2|CNS0G07K Tetraodon nigroviridis full-length cDNA Length = 809 Score = 135 bits (68), Expect = 2e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 484 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 543 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||||||||| ||||| ||||| || |||||||| |||||| Sbjct: 544 atccaggacaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcag 603 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 604 ctggaagatgg 614 Score = 105 bits (53), Expect = 2e-19 Identities = 113/132 (85%), Gaps = 1/132 (0%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 29 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 88 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaat-ttttgctggaaagca 164 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| ||||| Sbjct: 89 atccaggacaaggaaggcattccccctgatcagcagaggctgatcctttgctggcaagca 148 Query: 165 gttggaagatgg 176 | | |||||||| Sbjct: 149 gcttgaagatgg 160
>emb|CR695995.3|CNS0FZZB Tetraodon nigroviridis full-length cDNA Length = 810 Score = 135 bits (68), Expect = 2e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 485 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 544 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||||||||| ||||| ||||| || |||||||| |||||| Sbjct: 545 atccaggacaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcag 604 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 605 ctggaagatgg 615 Score = 119 bits (60), Expect = 1e-23 Identities = 113/131 (86%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 29 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 88 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 89 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 148 Query: 166 ttggaagatgg 176 | |||||||| Sbjct: 149 cttgaagatgg 159 Score = 103 bits (52), Expect = 7e-19 Identities = 111/131 (84%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| || ||||| ||| || ||||||||| || ||||| |||||||| Sbjct: 257 ggcaaaaccatcactcttgaggtggagcccagcgacaccattgagaacgtgaaggccaaa 316 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 317 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 376 Query: 166 ttggaagatgg 176 | |||||||| Sbjct: 377 cttgaagatgg 387
>emb|CR695975.2|CNS0FZYR Tetraodon nigroviridis full-length cDNA Length = 791 Score = 135 bits (68), Expect = 2e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 490 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 549 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||||||||| ||||| ||||| || |||||||| |||||| Sbjct: 550 atccaggacaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcag 609 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 610 ctggaagatgg 620 Score = 107 bits (54), Expect = 5e-20 Identities = 115/133 (86%), Gaps = 2/133 (1%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 29 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 88 Query: 106 atccaggacaaggagggcatt-cccccagaccagcaaaggctaat-ttttgctggaaagc 163 |||||||||||||| |||||| ||||| || ||||| ||||| || ||||||||| |||| Sbjct: 89 atccaggacaaggaaggcattcccccctgatcagcagaggctgatcttttgctggcaagc 148 Query: 164 agttggaagatgg 176 || |||||||||| Sbjct: 149 agctggaagatgg 161 Score = 97.6 bits (49), Expect = 4e-17 Identities = 108/128 (84%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| || ||||| ||| || ||||||||| || ||||||||| |||| Sbjct: 259 ggcaaaaccatcactcttgaggtggagcccagcgacaccattgagaacgtcaagaccaaa 318 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||||||||| || ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 319 atccaggacaaagaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 378 Query: 166 ttggaaga 173 ||||||| Sbjct: 379 ctggaaga 386
>emb|CR693873.3|CNS0FYCD Tetraodon nigroviridis full-length cDNA Length = 800 Score = 135 bits (68), Expect = 2e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 484 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 543 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||||||||| ||||| ||||| || |||||||| |||||| Sbjct: 544 atccaggacaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcag 603 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 604 ctggaagatgg 614 Score = 127 bits (64), Expect = 5e-26 Identities = 114/131 (87%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 29 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 88 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 89 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 148 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 149 ctggaagatgg 159 Score = 71.9 bits (36), Expect = 3e-09 Identities = 108/131 (82%), Gaps = 1/131 (0%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| || ||||| ||| || ||||||||| || ||||||||| |||| Sbjct: 257 ggcaaaaccatcactcttgaggtggagcccagcgacaccattgagaacgtcaagaccaaa 316 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||||||||| | ||| |||||| || ||||| ||||| || |||||||| |||||| Sbjct: 317 atccaggacaaag-gggtggtccccctgatcagcagaggctgatctttgctggcaagcag 375 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 376 ctggaagatgg 386
>emb|CR682459.2|CNS0FPJB Tetraodon nigroviridis full-length cDNA Length = 810 Score = 135 bits (68), Expect = 2e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 486 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 545 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||||||||| ||||| ||||| || |||||||| |||||| Sbjct: 546 atccaggacaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcag 605 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 606 ctggaagatgg 616 Score = 113 bits (57), Expect = 7e-22 Identities = 114/132 (86%), Gaps = 1/132 (0%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 29 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 88 Query: 106 atccaggacaaggagggcatt-cccccagaccagcaaaggctaatttttgctggaaagca 164 |||||||||||||| |||||| ||||| || ||||| ||||| || |||||||| ||||| Sbjct: 89 atccaggacaaggaaggcattcccccctgatcagcagaggctgatctttgctggcaagca 148 Query: 165 gttggaagatgg 176 | |||||||||| Sbjct: 149 gctggaagatgg 160 Score = 87.7 bits (44), Expect = 4e-14 Identities = 109/131 (83%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| || ||||| ||| || ||||||||| || ||||||||| |||| Sbjct: 258 ggcaaaaccatcactcttgaggtggagcccagcgacaccattgagaacgtcaagaccaaa 317 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||||||||| || || ||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 318 atccaggacaaagaaggtgttccccctgatcagcagaggctgatctttgctggcaagcag 377 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 378 ctggaagatgg 388
>emb|CR662492.2|CNS0FA5E Tetraodon nigroviridis full-length cDNA Length = 752 Score = 135 bits (68), Expect = 2e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 486 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 545 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||||||||| ||||| ||||| || |||||||| |||||| Sbjct: 546 atccaggacaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcag 605 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 606 ctggaagatgg 616 Score = 119 bits (60), Expect = 1e-23 Identities = 113/131 (86%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 29 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 88 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 89 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 148 Query: 166 ttggaagatgg 176 | |||||||| Sbjct: 149 cttgaagatgg 159 Score = 103 bits (52), Expect = 7e-19 Identities = 111/131 (84%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| || ||||| ||| || ||||||||| || ||||| ||| |||| Sbjct: 257 ggcaaaaccatcactcttgaggtggagcccagcgacaccattgagaacgtgaagaccaaa 316 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 317 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 376 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 377 ctggaagatgg 387
>emb|CR658953.2|CNS0F7F3 Tetraodon nigroviridis full-length cDNA Length = 683 Score = 135 bits (68), Expect = 2e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 257 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 316 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| ||||||||||| |||||| Sbjct: 317 atccaggacaaggaaggcattccccctgatcagcagaggctgatttttgctggcaagcag 376 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 377 ctggaagatgg 387 Score = 129 bits (65), Expect = 1e-26 Identities = 148/176 (84%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 29 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 88 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 89 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 148 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 |||||||||| || || | | || |||||||| ||||||||||| || ||||| Sbjct: 149 ctggaagatggccgcaccctgtccgactacaacatccagaaagagtccaccctcca 204 Score = 97.6 bits (49), Expect = 4e-17 Identities = 112/132 (84%), Gaps = 1/132 (0%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaac-gtcaaggccaa 104 ||||| |||||||| |||||||| ||| || ||||||||| || ||| |||||| |||| Sbjct: 486 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacagtcaagaccaa 545 Query: 105 gatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagca 164 ||||||||||| || ||||||||||| || ||||| ||||| || |||||||| ||||| Sbjct: 546 aatccaggacaaagaaggcattccccctgatcagcagaggctgatctttgctggcaagca 605 Query: 165 gttggaagatgg 176 | |||||||||| Sbjct: 606 gctggaagatgg 617
>emb|CR657552.2|CNS0F6C6 Tetraodon nigroviridis full-length cDNA Length = 810 Score = 135 bits (68), Expect = 2e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 486 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 545 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||||||||| ||||| ||||| || |||||||| |||||| Sbjct: 546 atccaggacaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcag 605 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 606 ctggaagatgg 616 Score = 127 bits (64), Expect = 5e-26 Identities = 114/131 (87%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 29 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 88 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 89 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 148 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 149 ctggaagatgg 159 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 78 cgacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagacca 137 ||||||||| || ||||||||| |||| ||||||||||| || ||||||||||| || || Sbjct: 290 cgacaccattgagaacgtcaagaccaaaatccaggacaaagaaggcattccccctgatca 349 Query: 138 gcaaaggctaatttttgctggaaagcagttggaagatgg 176 ||| ||||| || |||||||| |||||| |||||||||| Sbjct: 350 gcagaggctgatctttgctggcaagcagctggaagatgg 388
>emb|CR648990.2|CNS0EZQC Tetraodon nigroviridis full-length cDNA Length = 755 Score = 135 bits (68), Expect = 2e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 485 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 544 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||||||||| ||||| ||||| || |||||||| |||||| Sbjct: 545 atccaggacaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcag 604 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 605 ctggaagatgg 615 Score = 121 bits (61), Expect = 3e-24 Identities = 147/176 (83%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 29 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 88 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 89 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 148 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 | |||||||| || || | | || |||||||| ||||||||||| || ||||| Sbjct: 149 cttgaagatggccgcaccctgtccgactacaacatccagaaagagtccactctcca 204 Score = 103 bits (52), Expect = 7e-19 Identities = 111/131 (84%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| || ||||| ||| || ||||||||| || ||||| ||| |||| Sbjct: 257 ggcaaaaccatcactcttgaggtggagcccagcgacaccattgagaacgtgaagaccaaa 316 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 317 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 376 Query: 166 ttggaagatgg 176 |||||||||| Sbjct: 377 ctggaagatgg 387
>gb|BT000701.1| Arabidopsis thaliana clone RAFL08-11-A12 (R11186) putative polyubiquitin (UBQ10) (At4g05320) mRNA, complete cds Length = 1616 Score = 135 bits (68), Expect = 2e-28 Identities = 163/195 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| |||||||||||||||||| |||||| Sbjct: 91 accggaaagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggcc 150 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| |||||||||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 151 aagatccaggataaggagggcattcctccggatcagcagaggcttattttcgccggcaag 210 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || || ||||||||||| || ||||| || || || ||||| Sbjct: 211 cagctagaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 270 Query: 223 ttggtcctgaggctc 237 |||||||| |||||| Sbjct: 271 ttggtcctcaggctc 285 Score = 107 bits (54), Expect = 5e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 355 gacaccatcgacaacgtcaaggccaagatccaagacaaagagggtattcctccggaccag 414 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgg 176 || ||||| || || || |||||||||||||| ||||| Sbjct: 415 cagaggctgatcttcgccggaaagcagttggaggatgg 452 Score = 95.6 bits (48), Expect = 2e-16 Identities = 156/191 (81%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||||||||| || || || || ||| ||||||||| ||||||||||||| Sbjct: 1229 tgaccggaaagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaagg 1288 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||| || ||||| || |||||| | | || || || ||||||| Sbjct: 1289 ccaagatccaggacaaggaaggtattcctccggaccag-agcgtctcatcttcgctggaa 1347 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || || || || |||||||| ||||| ||||| || || | Sbjct: 1348 agcagcttgaggatggacgtactttggccgactacaacatccagaaggagtctactcttc 1407 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 1408 acttggtcctg 1418 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| | ||||| |||||| |||||||| |||||||| |||||| Sbjct: 1003 accggaaagactatcactttggaggtagagagctctgacaccattgacaacgtgaaggcc 1062 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||| || || || || |||||||| ||| | || ||||| ||||| Sbjct: 1063 aagatccaggataaggaaggaatccctccggaccagcagaggttgatctttgccggaaaa 1122 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 || ||||| ||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 1123 caattggaggatggtcgtactttggcggattacaacatccagaaggagtcgac 1175 Score = 69.9 bits (35), Expect = 1e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||||||||| | ||||| ||||| |||||||| || ||||| || ||| Sbjct: 775 accggaaagaccatcactttggaggtggagagttctgacaccattgataacgtgaaagcc 834 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||||||||| ||||| || || || |||||||| || | || || || |||||| Sbjct: 835 aagatccaggacaaagagggtatcccaccggaccagcagagattgatcttcgccggaaag 894 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || | |||||||| |||| || ||||| |||||||||||||| ||||| Sbjct: 895 caacttgaagatggaagaactttggctgactacaacattcagaaggagtc 944 Score = 60.0 bits (30), Expect = 1e-05 Identities = 120/150 (80%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| || ||||| || ||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 583 gacaccattgataacgtgaaagccaagatccaagacaaagagggtattcctccggaccag 642 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || || | || || || ||||| || | |||||||| |||| || || || |||||| Sbjct: 643 cagagattgatcttcgccggaaaacaacttgaagatggcagaactttggccgactacaac 702 Query: 199 attcagaaagagtcgacgctccatttggtc 228 |||||||| ||||| || ||||| |||||| Sbjct: 703 attcagaaggagtccacactccacttggtc 732
>gb|AY056295.1| Arabidopsis thaliana At4g05320 mRNA sequence Length = 1637 Score = 135 bits (68), Expect = 2e-28 Identities = 163/195 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| |||||||||||||||||| |||||| Sbjct: 91 accggaaagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggcc 150 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| |||||||||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 151 aagatccaggataaggagggcattcctccggatcagcagaggcttattttcgccggcaag 210 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || || ||||||||||| || ||||| || || || ||||| Sbjct: 211 cagctagaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 270 Query: 223 ttggtcctgaggctc 237 |||||||| |||||| Sbjct: 271 ttggtcctcaggctc 285 Score = 111 bits (56), Expect = 3e-21 Identities = 157/191 (82%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||||||||| || || || || ||| ||||||||| ||||||||||||| Sbjct: 1229 tgaccggaaagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaagg 1288 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||| || ||||| || |||||||| | || || || ||||||| Sbjct: 1289 ccaagatccaggacaaggaaggtattcctccggaccagcagcgtctcatcttcgctggaa 1348 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || || || || |||||||| ||||| ||||| || || | Sbjct: 1349 agcagcttgaggatggacgtactttggccgactacaacatccagaaggagtctactcttc 1408 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 1409 acttggtcctg 1419 Score = 107 bits (54), Expect = 5e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 355 gacaccatcgacaacgtcaaggccaagatccaagacaaagagggtattcctccggaccag 414 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgg 176 || ||||| || || || |||||||||||||| ||||| Sbjct: 415 cagaggctgatcttcgccggaaagcagttggaggatgg 452 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| | ||||| |||||| |||||||| |||||||| |||||| Sbjct: 1003 accggaaagactatcactttggaggtagagagctctgacaccattgacaacgtgaaggcc 1062 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||| || || || || |||||||| ||| | || ||||| ||||| Sbjct: 1063 aagatccaggataaggaaggaatccctccggaccagcagaggttgatctttgccggaaaa 1122 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 || ||||| ||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 1123 caattggaggatggtcgtactttggcggattacaacatccagaaggagtcgac 1175 Score = 69.9 bits (35), Expect = 1e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||||||||| | ||||| ||||| |||||||| || ||||| || ||| Sbjct: 775 accggaaagaccatcactttggaggtggagagttctgacaccattgataacgtgaaagcc 834 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||||||||| ||||| || || || |||||||| || | || || || |||||| Sbjct: 835 aagatccaggacaaagagggtatcccaccggaccagcagagattgatcttcgccggaaag 894 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || | |||||||| |||| || ||||| |||||||||||||| ||||| Sbjct: 895 caacttgaagatggaagaactttggctgactacaacattcagaaggagtc 944 Score = 52.0 bits (26), Expect = 0.002 Identities = 110/138 (79%) Strand = Plus / Plus Query: 91 aacgtcaaggccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatt 150 ||||| || ||||||||||| ||||| ||||| ||||| || |||||||| || | || Sbjct: 595 aacgtgaaagccaagatccaagacaaagagggtattcctccggaccagcagagattgatc 654 Query: 151 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagag 210 || || ||||| || | |||||||| |||| || || || |||||||||||||| ||| Sbjct: 655 ttcgccggaaaacaacttgaagatggcagaactttggccgactacaacattcagaaggag 714 Query: 211 tcgacgctccatttggtc 228 || || ||||| |||||| Sbjct: 715 tccacactccacttggtc 732
>emb|X12853.1|ATUBQ4 Arabidopsis thaliana UBQ4 gene for polyubiquitin Length = 1149 Score = 135 bits (68), Expect = 2e-28 Identities = 151/179 (84%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| |||||||| |||||| |||||||||||||| || ||||| |||||| Sbjct: 31 aagaccatcactctcgaggttgagagctctgacaccatcgacaatgttaaggcaaagatc 90 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 ||||||||||| |||||||| || ||||||||||| | || || ||||| |||||| | Sbjct: 91 caggacaaggaaggcattcctcctgaccagcaaagattgatcttcgctggtaagcagcta 150 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggt 227 |||||||| || || || |||||||||||||| |||||||| || || ||||| ||||| Sbjct: 151 gaagatggccgcaccttggctgattacaacatccagaaagaatcaaccctccacttggt 209 Score = 83.8 bits (42), Expect = 7e-13 Identities = 143/177 (80%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||| ||||| | ||||| |||||| ||||| ||||| || |||||||| ||| Sbjct: 712 ggcaagactatcactttggaggttgagagctcagacacaatcgataatgtcaaggcaaag 771 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 || || |||||||| || ||||| ||||| ||||| || || || ||||||||||| ||| Sbjct: 772 attcaagacaaggaagggattccaccagatcagcagagactcatatttgctggaaaacag 831 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 | |||||||| || ||| | |||||||||||||| || || ||||| || |||||| Sbjct: 832 cttgaagatggacgcacactcgctgattacaacatccaaaaggagtctaccctccat 888 Score = 83.8 bits (42), Expect = 7e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| || |||||||||||||| ||||||||||||||||| || || || || |||||| Sbjct: 289 gacactattgacaacgtcaaggcaaagatccaggacaaggaaggaatccctccggaccag 348 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgg 176 ||||| || ||||| ||||| |||||| | |||||||| Sbjct: 349 caaagacttattttcgctggtaagcagcttgaagatgg 386 Score = 67.9 bits (34), Expect = 4e-08 Identities = 138/173 (79%) Strand = Plus / Plus Query: 55 atcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatccaggac 114 ||||| || ||||| |||||| |||||||| ||||| ||||| || |||||||| || Sbjct: 493 atcacccttgaggttgagagctcagacaccattgacaatgtcaaagctaagatccaagat 552 Query: 115 aaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttggaagat 174 || ||||| || || || |||||||| ||||| || ||||| || |||||| | || ||| Sbjct: 553 aaagagggaatcccaccggaccagcagaggcttatctttgccggtaagcagctagaggat 612 Query: 175 gggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggt 227 || || || | |||||||||||||| || |||||||| || || |||||||| Sbjct: 613 ggtcgcactcttgctgattacaacatccaaaaagagtcaacccttcatttggt 665 Score = 44.1 bits (22), Expect = 0.57 Identities = 97/122 (79%) Strand = Plus / Plus Query: 94 gtcaaggccaagatccaggacaaggagggcattcccccagaccagcaaaggctaattttt 153 |||||||| ||||| ||||||||||| || || || || ||||| || || || || || Sbjct: 988 gtcaaggctaagattcaggacaaggaagggatcccaccggaccaacagagactcatcttc 1047 Query: 154 gctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcg 213 ||||| |||||| | || ||||| || || | || ||||||||||| ||||| |||||| Sbjct: 1048 gctgggaagcagcttgaggatggtcggactcttgcagattacaacatccagaaggagtcg 1107 Query: 214 ac 215 || Sbjct: 1108 ac 1109
>emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 15 Length = 199987 Score = 135 bits (68), Expect = 2e-28 Identities = 163/195 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| |||||||||||||||||| |||||| Sbjct: 57036 accggaaagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggcc 57095 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| |||||||||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 57096 aagatccaggataaggagggcattcctccggatcagcagaggcttattttcgccggcaag 57155 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || || ||||||||||| || ||||| || || || ||||| Sbjct: 57156 cagctagaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 57215 Query: 223 ttggtcctgaggctc 237 |||||||| |||||| Sbjct: 57216 ttggtcctcaggctc 57230 Score = 107 bits (54), Expect = 5e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 57300 gacaccatcgacaacgtcaaggccaagatccaagacaaagagggtattcctccggaccag 57359 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgg 176 || ||||| || || || |||||||||||||| ||||| Sbjct: 57360 cagaggctgatcttcgccggaaagcagttggaggatgg 57397 Score = 103 bits (52), Expect = 7e-19 Identities = 157/191 (82%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||||||||| || || || || ||| ||||||||| ||||||||||||| Sbjct: 58174 tgaccggaaagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaagg 58233 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||| || ||||| || |||||||| | || || || ||||||| Sbjct: 58234 ccaagatccaggacaagga-ggtattcctccggaccagcagcgtctcatcttcgctggaa 58292 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || || || || |||||||| ||||| ||||| || || | Sbjct: 58293 agcagcttgaggatggacgtactttggccgactacaacatccagaaggagtctactcttc 58352 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 58353 acttggtcctg 58363 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| | ||||| |||||| |||||||| |||||||| |||||| Sbjct: 57948 accggaaagactatcactttggaggtagagagctctgacaccattgacaacgtgaaggcc 58007 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||| || || || || |||||||| ||| | || ||||| ||||| Sbjct: 58008 aagatccaggataaggaaggaatccctccggaccagcagaggttgatctttgccggaaaa 58067 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 || ||||| ||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 58068 caattggaggatggtcgtactttggcggattacaacatccagaaggagtcgac 58120 Score = 69.9 bits (35), Expect = 1e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||||||||| | ||||| ||||| |||||||| || ||||| || ||| Sbjct: 57720 accggaaagaccatcactttggaggtggagagttctgacaccattgataacgtgaaagcc 57779 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||||||||| ||||| || || || |||||||| || | || || || |||||| Sbjct: 57780 aagatccaggacaaagagggtatcccaccggaccagcagagattgatcttcgccggaaag 57839 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || | |||||||| |||| || ||||| |||||||||||||| ||||| Sbjct: 57840 caacttgaagatggaagaactttggctgactacaacattcagaaggagtc 57889 Score = 60.0 bits (30), Expect = 1e-05 Identities = 120/150 (80%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| || ||||| || ||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 57528 gacaccattgataacgtgaaagccaagatccaagacaaagagggtattcctccggaccag 57587 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || || | || || || ||||| || | |||||||| |||| || || || |||||| Sbjct: 57588 cagagattgatcttcgccggaaaacaacttgaagatggcagaactttggccgactacaac 57647 Query: 199 attcagaaagagtcgacgctccatttggtc 228 |||||||| ||||| || ||||| |||||| Sbjct: 57648 attcagaaggagtccacactccacttggtc 57677
>gb|AY139999.1| Arabidopsis thaliana polyubiquitin UBQ10 (At4g05320) mRNA, complete cds Length = 1815 Score = 135 bits (68), Expect = 2e-28 Identities = 163/195 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| |||||||||||||||||| |||||| Sbjct: 91 accggaaagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggcc 150 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| |||||||||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 151 aagatccaggataaggagggcattcctccggatcagcagaggcttattttcgccggcaag 210 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || || ||||||||||| || ||||| || || || ||||| Sbjct: 211 cagctagaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 270 Query: 223 ttggtcctgaggctc 237 |||||||| |||||| Sbjct: 271 ttggtcctcaggctc 285 Score = 111 bits (56), Expect = 3e-21 Identities = 157/191 (82%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||||||||| || || || || ||| ||||||||| ||||||||||||| Sbjct: 1229 tgaccggaaagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaagg 1288 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||| || ||||| || |||||||| | || || || ||||||| Sbjct: 1289 ccaagatccaggacaaggaaggtattcctccggaccagcagcgtctcatcttcgctggaa 1348 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || || || || |||||||| ||||| ||||| || || | Sbjct: 1349 agcagcttgaggatggacgtactttggccgactacaacatccagaaggagtctactcttc 1408 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 1409 acttggtcctg 1419 Score = 107 bits (54), Expect = 5e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 355 gacaccatcgacaacgtcaaggccaagatccaagacaaagagggtattcctccggaccag 414 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgg 176 || ||||| || || || |||||||||||||| ||||| Sbjct: 415 cagaggctgatcttcgccggaaagcagttggaggatgg 452 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| | ||||| |||||| |||||||| |||||||| |||||| Sbjct: 1003 accggaaagactatcactttggaggtagagagctctgacaccattgacaacgtgaaggcc 1062 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||| || || || || |||||||| ||| | || ||||| ||||| Sbjct: 1063 aagatccaggataaggaaggaatccctccggaccagcagaggttgatctttgccggaaaa 1122 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 || ||||| ||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 1123 caattggaggatggtcgtactttggcggattacaacatccagaaggagtcgac 1175 Score = 69.9 bits (35), Expect = 1e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||||||||| | ||||| ||||| |||||||| || ||||| || ||| Sbjct: 775 accggaaagaccatcactttggaggtggagagttctgacaccattgataacgtgaaagcc 834 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||||||||| ||||| || || || |||||||| || | || || || |||||| Sbjct: 835 aagatccaggacaaagagggtatcccaccggaccagcagagattgatcttcgccggaaag 894 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || | |||||||| |||| || ||||| |||||||||||||| ||||| Sbjct: 895 caacttgaagatggaagaactttggctgactacaacattcagaaggagtc 944 Score = 60.0 bits (30), Expect = 1e-05 Identities = 120/150 (80%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| || ||||| || ||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 583 gacaccattgataacgtgaaagccaagatccaagacaaagagggtattcctccggaccag 642 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || || | || || || ||||| || | |||||||| |||| || || || |||||| Sbjct: 643 cagagattgatcttcgccggaaaacaacttgaagatggcagaactttggccgactacaac 702 Query: 199 attcagaaagagtcgacgctccatttggtc 228 |||||||| ||||| || ||||| |||||| Sbjct: 703 attcagaaggagtccacactccacttggtc 732
>emb|CR621420.1| full-length cDNA clone CS0DE004YK08 of Placenta of Homo sapiens (human) Length = 2162 Score = 135 bits (68), Expect = 2e-28 Identities = 142/167 (85%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||||||||| |||||||| || ||| Sbjct: 310 ggcaagaccatcacccttgaggtcgagcccagtgacaccatcgagaacgtcaaagcaaag 369 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 370 atccaggacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 429 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 430 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 476 Score = 119 bits (60), Expect = 1e-23 Identities = 140/167 (83%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||| ||||| |||||||| || ||| Sbjct: 766 ggcaagaccatcacccttgaggtcgagcccagtgacactatcgagaacgtcaaagcaaag 825 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||| |||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 826 atccaagacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 885 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 886 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 932 Score = 115 bits (58), Expect = 2e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 76 ctgactggtaagaccatcaccctcgaggttgagcccagtgacaccatcgagaatgtcaag 135 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || |||||||| ||||| || ||||||||| Sbjct: 136 gcaaagatccaagataaggaaggcatccctcctgaccagcagaggctgatctttgctgga 195 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 196 aaacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 248 Score = 89.7 bits (45), Expect = 1e-14 Identities = 155/192 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 1900 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 1959 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || || ||||| ||| | || |||||||| Sbjct: 1960 gcaaagatccaagataaggaaggcatccctcctgatcagcagaggttgatctttgctggg 2019 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 || ||| |||||||||| || || | |||| |||||||| ||||||||||| || || Sbjct: 2020 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtccactctg 2079 Query: 220 catttggtcctg 231 || ||||||||| Sbjct: 2080 cacttggtcctg 2091 Score = 83.8 bits (42), Expect = 7e-13 Identities = 140/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| | |||||||| || || |||||| Sbjct: 1216 ctgactggtaagaccatcactctcgaggtggagccgagtgacaccattgagaatgtcaag 1275 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1276 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1335 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1336 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1388 Score = 83.8 bits (42), Expect = 7e-13 Identities = 140/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 532 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 591 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| |||||||| | || ||||| ||| | || ||||| ||| Sbjct: 592 gcaaagatccaagataaggaaggcattccttctgatcagcagaggttgatctttgccgga 651 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 652 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 704 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 1672 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1731 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1732 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1791 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1792 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1844 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 1444 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1503 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1504 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1563 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1564 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1616 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 988 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1047 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || ||||| ||| Sbjct: 1048 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgccgga 1107 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1108 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 1160
>dbj|AK097415.1| Homo sapiens cDNA FLJ40096 fis, clone TESTI2004080, highly similar to Homo sapiens mRNA for polyubiquitin UbC Length = 1864 Score = 135 bits (68), Expect = 2e-28 Identities = 142/167 (85%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||||||||| |||||||| || ||| Sbjct: 224 ggcaagaccatcacccttgaggtcgagcccagtgacaccatcgagaacgtcaaagcaaag 283 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 284 atccaggacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 343 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 344 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 390 Score = 119 bits (60), Expect = 1e-23 Identities = 140/167 (83%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||| ||||| |||||||| || ||| Sbjct: 680 ggcaagaccatcacccttgaggtcgagcccagtgacactatcgagaacgtcaaagcaaag 739 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||| |||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 740 atccaagacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 799 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 800 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 846 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 446 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 505 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| |||||||| || || ||||| ||| | || ||||| ||| Sbjct: 506 gcaaagatccaagataaggaaggcattcctcctgatcagcagaggttgatctttgccgga 565 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 566 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 618 Score = 89.7 bits (45), Expect = 1e-14 Identities = 155/192 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 1586 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 1645 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || || ||||| ||| | || |||||||| Sbjct: 1646 gcaaagatccaagataaggaaggcatccctcctgatcagcagaggttgatctttgctggg 1705 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 || ||| |||||||||| || || | |||| |||||||| ||||||||||| || || Sbjct: 1706 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtccactctg 1765 Query: 220 catttggtcctg 231 || ||||||||| Sbjct: 1766 cacttggtcctg 1777 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 1358 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1417 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1418 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1477 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1478 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1530 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 1130 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1189 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1190 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1249 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1250 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1302 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 902 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 961 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || ||||| ||| Sbjct: 962 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgccgga 1021 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1022 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 1074 Score = 42.1 bits (21), Expect = 2.2 Identities = 62/76 (81%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| | |||||||| || || |||||| Sbjct: 142 ctgactggtaagaccatcactctcgaggtggagccgagtgacaccattgagaatgtcaag 201 Query: 100 gccaagatccaggaca 115 || |||||||| |||| Sbjct: 202 gcaaagatccaagaca 217
>ref|NM_021009.3| Homo sapiens ubiquitin C (UBC), mRNA Length = 2418 Score = 135 bits (68), Expect = 2e-28 Identities = 142/167 (85%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||||||||| |||||||| || ||| Sbjct: 534 ggcaagaccatcacccttgaggtcgagcccagtgacaccatcgagaacgtcaaagcaaag 593 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 594 atccaggacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 653 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 654 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 700 Score = 119 bits (60), Expect = 1e-23 Identities = 140/167 (83%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||| ||||| |||||||| || ||| Sbjct: 990 ggcaagaccatcacccttgaggtcgagcccagtgacactatcgagaacgtcaaagcaaag 1049 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||| |||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 1050 atccaagacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 1109 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1110 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1156 Score = 115 bits (58), Expect = 2e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 300 ctgactggtaagaccatcaccctcgaggttgagcccagtgacaccatcgagaatgtcaag 359 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || |||||||| ||||| || ||||||||| Sbjct: 360 gcaaagatccaagataaggaaggcatccctcctgaccagcagaggctgatctttgctgga 419 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 420 aaacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 472 Score = 89.7 bits (45), Expect = 1e-14 Identities = 155/192 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 2124 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 2183 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || || ||||| ||| | || |||||||| Sbjct: 2184 gcaaagatccaagataaggaaggcatccctcctgatcagcagaggttgatctttgctggg 2243 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 || ||| |||||||||| || || | |||| |||||||| ||||||||||| || || Sbjct: 2244 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtccactctg 2303 Query: 220 catttggtcctg 231 || ||||||||| Sbjct: 2304 cacttggtcctg 2315 Score = 83.8 bits (42), Expect = 7e-13 Identities = 140/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| | |||||||| || || |||||| Sbjct: 1440 ctgactggtaagaccatcactctcgaggtggagccgagtgacaccattgagaatgtcaag 1499 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1500 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1559 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1560 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1612 Score = 83.8 bits (42), Expect = 7e-13 Identities = 140/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 756 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 815 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| |||||||| | || ||||| ||| | || ||||| ||| Sbjct: 816 gcaaagatccaagataaggaaggcattccttctgatcagcagaggttgatctttgccgga 875 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 876 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 928 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 1896 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1955 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1956 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 2015 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2016 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 2068 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 1668 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1727 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1728 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1787 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1788 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1840 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 1212 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1271 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || ||||| ||| Sbjct: 1272 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgccgga 1331 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1332 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 1384
>gb|AY057500.1| Arabidopsis thaliana AT4g05320/C17L7_240 mRNA, complete cds Length = 1319 Score = 135 bits (68), Expect = 2e-28 Identities = 163/195 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| |||||||||||||||||| |||||| Sbjct: 91 accggaaagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggcc 150 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| |||||||||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 151 aagatccaggataaggagggcattcctccggatcagcagaggcttattttcgccggcaag 210 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || || ||||||||||| || ||||| || || || ||||| Sbjct: 211 cagctagaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 270 Query: 223 ttggtcctgaggctc 237 |||||||| |||||| Sbjct: 271 ttggtcctcaggctc 285 Score = 133 bits (67), Expect = 8e-28 Identities = 133/155 (85%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 355 gacaccatcgacaacgtcaaggccaagatccaagacaaagagggtattcctccggaccag 414 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || || | || || || ||||||||| |||||||||| |||| || ||||| |||||| Sbjct: 415 cagagattgatcttcgccggaaagcagctggaagatggcagaactttggctgactacaac 474 Query: 199 attcagaaagagtcgacgctccatttggtcctgag 233 |||||||| ||||| || || |||||||||||||| Sbjct: 475 attcagaaggagtccacccttcatttggtcctgag 509 Score = 111 bits (56), Expect = 3e-21 Identities = 157/191 (82%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||||||||| || || || || ||| ||||||||| ||||||||||||| Sbjct: 1001 tgaccggaaagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaagg 1060 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||| || ||||| || |||||||| | || || || ||||||| Sbjct: 1061 ccaagatccaggacaaggaaggtattcctccggaccagcagcgtctcatcttcgctggaa 1120 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || || || || |||||||| ||||| ||||| || || | Sbjct: 1121 agcagcttgaggatggacgtactttggccgactacaacatccagaaggagtctactcttc 1180 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 1181 acttggtcctg 1191 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| | ||||| |||||| |||||||| |||||||| |||||| Sbjct: 775 accggaaagactatcactttggaggtagagagctctgacaccattgacaacgtgaaggcc 834 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||| || || || || |||||||| ||| | || ||||| ||||| Sbjct: 835 aagatccaggataaggaaggaatccctccggaccagcagaggttgatctttgccggaaaa 894 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 || ||||| ||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 895 caattggaggatggtcgtactttggcggattacaacatccagaaggagtcgac 947 Score = 69.9 bits (35), Expect = 1e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||||||||| | ||||| ||||| |||||||| || ||||| || ||| Sbjct: 547 accggaaagaccatcactttggaggtggagagttctgacaccattgataacgtgaaagcc 606 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||||||||| ||||| || || || |||||||| || | || || || |||||| Sbjct: 607 aagatccaggacaaagagggtatcccaccggaccagcagagattgatcttcgccggaaag 666 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || | |||||||| |||| || ||||| |||||||||||||| ||||| Sbjct: 667 caacttgaagatggaagaactttggctgactacaacattcagaaggagtc 716
>gb|AY052698.1| Arabidopsis thaliana AT4g05320/C17L7_240 mRNA, complete cds Length = 1356 Score = 135 bits (68), Expect = 2e-28 Identities = 163/195 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| |||||||||||||||||| |||||| Sbjct: 91 accggaaagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggcc 150 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| |||||||||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 151 aagatccaggataaggagggcattcctccggatcagcagaggcttattttcgccggcaag 210 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || || ||||||||||| || ||||| || || || ||||| Sbjct: 211 cagctagaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 270 Query: 223 ttggtcctgaggctc 237 |||||||| |||||| Sbjct: 271 ttggtcctcaggctc 285 Score = 111 bits (56), Expect = 3e-21 Identities = 157/191 (82%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||||||||| || || || || ||| ||||||||| ||||||||||||| Sbjct: 1001 tgaccggaaagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaagg 1060 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||| || ||||| || |||||||| | || || || ||||||| Sbjct: 1061 ccaagatccaggacaaggaaggtattcctccggaccagcagcgtctcatcttcgctggaa 1120 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || || || || |||||||| ||||| ||||| || || | Sbjct: 1121 agcagcttgaggatggacgtactttggccgactacaacatccagaaggagtctactcttc 1180 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 1181 acttggtcctg 1191 Score = 107 bits (54), Expect = 5e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 355 gacaccatcgacaacgtcaaggccaagatccaagacaaagagggtattcctccggaccag 414 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgg 176 || ||||| || || || |||||||||||||| ||||| Sbjct: 415 cagaggctgatcttcgccggaaagcagttggaggatgg 452 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| | ||||| |||||| |||||||| |||||||| |||||| Sbjct: 775 accggaaagactatcactttggaggtagagagctctgacaccattgacaacgtgaaggcc 834 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||| || || || || |||||||| ||| | || ||||| ||||| Sbjct: 835 aagatccaggataaggaaggaatccctccggaccagcagaggttgatctttgccggaaaa 894 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 || ||||| ||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 895 caattggaggatggtcgtactttggcggattacaacatccagaaggagtcgac 947 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| || ||||| || ||||||||||||||||| ||||| ||||| || |||||| Sbjct: 583 gacaccattgataacgtgaaagccaagatccaggacaaagagggtattcctccggaccag 642 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || || | || || || |||||||| | |||||||| |||| || ||||| |||||| Sbjct: 643 cagagattgatcttcgccggaaagcaacttgaagatggaagaactttggctgactacaac 702 Query: 199 attcagaaagagtc 212 |||||||| ||||| Sbjct: 703 attcagaaggagtc 716
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 135 bits (68), Expect = 2e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||| |||||| ||||||||||||||||||||||||||| Sbjct: 3341076 ggcaagaccatcaccctggaggttgagagctcggacaccatcgacaacgtcaaggccaag 3341017 Query: 106 atccaggacaaggagggcattcccccagaccagca 140 |||||||||||||||||||| |||||||||||||| Sbjct: 3341016 atccaggacaaggagggcatccccccagaccagca 3340982 Score = 125 bits (63), Expect = 2e-25 Identities = 94/102 (92%), Gaps = 2/102 (1%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcanc-gacaccatcgacaacgtcaa 98 |||||||||||||||||||| |||||||| || | | | |||||||||||||||||||| Sbjct: 3341538 ctgaccggcaagaccatcaccctcgaggtgga-atcttctgacaccatcgacaacgtcaa 3341480 Query: 99 ggccaagatccaggacaaggagggcattcccccagaccagca 140 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 3341479 ggccaagatccaggacaaggagggcattcccccggaccagca 3341438 Score = 125 bits (63), Expect = 2e-25 Identities = 152/182 (83%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||| ||| || ||||||||||| |||||| Sbjct: 3341310 ctgaccggcaagaccatcaccctcgaggtggagtcttctgataccatcgacaatgtcaag 3341251 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||||||||| |||||||| | || || |||||||| Sbjct: 3341250 gccaagatccaggacaaggagggcattcccccggaccagcagcgcctcatctttgctggc 3341191 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||| ||||| | || | ||||| |||||||| ||||| ||||| || ||| Sbjct: 3341190 aagcagctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctc 3341131 Query: 220 ca 221 || Sbjct: 3341130 ca 3341129 Score = 107 bits (54), Expect = 5e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 3341727 gacaccatcgacaacgtcaaggccaagatccaggacaaagagggcatccccccagaccag 3341668 Query: 139 ca 140 || Sbjct: 3341667 ca 3341666 Score = 99.6 bits (50), Expect = 1e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| | ||||| |||||| ||||||||| || || || |||||||||||| Sbjct: 3340845 aagaccatcactttggaggttgagagctccgacaccattgataatgtgaaggccaagatc 3340786 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||||||||| ||||||||||||||||| | || || || ||||| |||||| || Sbjct: 3340785 caggacaaggaggggattcccccagaccagcagcgtctgatcttcgctggcaagcagctg 3340726 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 || ||||| || || | || || |||||||| ||||| ||||| || ||||| Sbjct: 3340725 gaggatggacgcaccctcgccgactacaacatccagaaggagtccaccctcca 3340673 Score = 87.7 bits (44), Expect = 4e-14 Identities = 142/175 (81%) Strand = Plus / Minus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||| ||||| |||||||| ||| | ||||||||||| || ||||||| Sbjct: 3341993 tgaccggcaagactatcaccctcgaggtggagtcctctgacaccatcgataatgtcaagg 3341934 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 | |||||||| || ||||||||||| ||||| |||||||| | || || || ||||| | Sbjct: 3341933 ctaagatccaagataaggagggcatccccccggaccagcagcgtctcatcttcgctggca 3341874 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 ||||| |||| ||||| | || | ||||| |||||||| ||||| |||||||| Sbjct: 3341873 agcagctggaggatggcaggacccttgctgactacaacatccagaaggagtcgac 3341819
>gb|AC126309.8| Homo sapiens 12 BAC RP11-592O2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 121984 Score = 135 bits (68), Expect = 2e-28 Identities = 142/167 (85%) Strand = Plus / Minus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||||||||| |||||||| || ||| Sbjct: 105853 ggcaagaccatcacccttgaggtcgagcccagtgacaccatcgagaacgtcaaagcaaag 105794 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 105793 atccaggacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 105734 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 105733 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 105687 Score = 119 bits (60), Expect = 1e-23 Identities = 140/167 (83%) Strand = Plus / Minus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||| ||||| |||||||| || ||| Sbjct: 105397 ggcaagaccatcacccttgaggtcgagcccagtgacactatcgagaacgtcaaagcaaag 105338 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||| |||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 105337 atccaagacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 105278 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 105277 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 105231 Score = 115 bits (58), Expect = 2e-22 Identities = 144/173 (83%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 106087 ctgactggtaagaccatcaccctcgaggttgagcccagtgacaccatcgagaatgtcaag 106028 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || |||||||| ||||| || ||||||||| Sbjct: 106027 gcaaagatccaagataaggaaggcatccctcctgaccagcagaggctgatctttgctgga 105968 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 105967 aaacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 105915 Score = 89.7 bits (45), Expect = 1e-14 Identities = 155/192 (80%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 104263 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 104204 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || || ||||| ||| | || |||||||| Sbjct: 104203 gcaaagatccaagataaggaaggcatccctcctgatcagcagaggttgatctttgctggg 104144 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 || ||| |||||||||| || || | |||| |||||||| ||||||||||| || || Sbjct: 104143 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtccactctg 104084 Query: 220 catttggtcctg 231 || ||||||||| Sbjct: 104083 cacttggtcctg 104072 Score = 83.8 bits (42), Expect = 7e-13 Identities = 140/173 (80%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 105631 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 105572 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| |||||||| | || ||||| ||| | || ||||| ||| Sbjct: 105571 gcaaagatccaagataaggaaggcattccttctgatcagcagaggttgatctttgccgga 105512 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 105511 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 105459 Score = 83.8 bits (42), Expect = 7e-13 Identities = 140/173 (80%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| | |||||||| || || |||||| Sbjct: 104947 ctgactggtaagaccatcactctcgaggtggagccgagtgacaccattgagaatgtcaag 104888 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 104887 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 104828 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 104827 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 104775 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 105175 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 105116 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || ||||| ||| Sbjct: 105115 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgccgga 105056 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 105055 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 105003 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 104719 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 104660 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 104659 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 104600 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 104599 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 104547 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 104491 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 104432 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 104431 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 104372 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 104371 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 104319
>emb|BX827035.1|CNS0A37F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1555 Score = 135 bits (68), Expect = 2e-28 Identities = 163/195 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| |||||||||||||||||| |||||| Sbjct: 81 accggaaagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggcc 140 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| |||||||||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 141 aagatccaggataaggagggcattcctccggatcagcagaggcttattttcgccggcaag 200 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || || ||||||||||| || ||||| || || || ||||| Sbjct: 201 cagctagaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 260 Query: 223 ttggtcctgaggctc 237 |||||||| |||||| Sbjct: 261 ttggtcctcaggctc 275 Score = 111 bits (56), Expect = 3e-21 Identities = 157/191 (82%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||||||||| || || || || ||| ||||||||| ||||||||||||| Sbjct: 1225 tgaccggaaagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaagg 1284 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||| || ||||| || |||||||| | || || || ||||||| Sbjct: 1285 ccaagatccaggacaaggaaggtattcctccggaccagcagcgtctcatcttcgctggaa 1344 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || || || || |||||||| ||||| ||||| || || | Sbjct: 1345 agcagcttgaggatggacgtactttggccgactacaacatccagaaggagtctactcttc 1404 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 1405 acttggtcctg 1415 Score = 107 bits (54), Expect = 5e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 345 gacaccatcgacaacgtcaaggccaagatccaagacaaagagggtattcctccggaccag 404 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgg 176 || ||||| || || || |||||||||||||| ||||| Sbjct: 405 cagaggctgatcttcgccggaaagcagttggaggatgg 442 Score = 65.9 bits (33), Expect = 2e-07 Identities = 108/133 (81%) Strand = Plus / Plus Query: 80 acaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccagc 139 ||||||| || ||||| || ||||||||||||||||| ||||| || || || ||||||| Sbjct: 803 acaccattgataacgtgaaagccaagatccaggacaaagagggtatcccaccggaccagc 862 Query: 140 aaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaaca 199 | || | || || || |||||||| | |||||||| |||| || ||||| ||||||| Sbjct: 863 agagattgatcttcgccggaaagcaacttgaagatggaagaactttggctgactacaaca 922 Query: 200 ttcagaaagagtc 212 ||||||| ||||| Sbjct: 923 ttcagaaggagtc 935 Score = 44.1 bits (22), Expect = 0.57 Identities = 43/50 (86%) Strand = Plus / Plus Query: 91 aacgtcaaggccaagatccaggacaaggagggcattcccccagaccagca 140 ||||| || ||||||||||| ||||| ||||| ||||| || |||||||| Sbjct: 586 aacgtgaaagccaagatccaagacaaagagggtattcctccggaccagca 635
>emb|BX828380.1|CNS0A30T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH81ZH07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1525 Score = 135 bits (68), Expect = 2e-28 Identities = 163/195 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| |||||||||||||||||| |||||| Sbjct: 77 accggaaagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggcc 136 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| |||||||||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 137 aagatccaggataaggagggcattcctccggatcagcagaggcttattttcgccggcaag 196 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || || ||||||||||| || ||||| || || || ||||| Sbjct: 197 cagctagaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 256 Query: 223 ttggtcctgaggctc 237 |||||||| |||||| Sbjct: 257 ttggtcctcaggctc 271 Score = 111 bits (56), Expect = 3e-21 Identities = 157/191 (82%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||||||||| || || || || ||| ||||||||| ||||||||||||| Sbjct: 1227 tgaccggaaagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaagg 1286 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||| || ||||| || |||||||| | || || || ||||||| Sbjct: 1287 ccaagatccaggacaaggaaggtattcctccggaccagcagcgtctcatcttcgctggaa 1346 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || || || || |||||||| ||||| ||||| || || | Sbjct: 1347 agcagcttgaggatggacgtactttggccgactacaacatccagaaggagtctactcttc 1406 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 1407 acttggtcctg 1417 Score = 60.0 bits (30), Expect = 1e-05 Identities = 108/134 (80%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| || ||||| || |||||||||||||||| ||||| || || || |||||| Sbjct: 806 gacaccattgataacgtgaaacccaagatccaggacaaagagggtatcccaccggaccag 865 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || || | || || || |||||||| | |||||||| |||| || ||||| |||||| Sbjct: 866 cagagattgatcttcgccggaaagcaacttgaagatggaagaactttggctgactacaac 925 Query: 199 attcagaaagagtc 212 |||||||| ||||| Sbjct: 926 attcagaaggagtc 939 Score = 60.0 bits (30), Expect = 1e-05 Identities = 120/150 (80%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| || ||||| || ||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 578 gacaccattgataacgtgaaagccaagatccaagacaaagagggtattcctccggaccag 637 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || || | || || || ||||| || | |||||||| |||| || || || |||||| Sbjct: 638 cagagattgatcttcgccggaaaacaacttgaagatggcagaactttggccgactacaac 697 Query: 199 attcagaaagagtcgacgctccatttggtc 228 |||||||| ||||| || ||||| |||||| Sbjct: 698 attcagaaggagtccacactccacttggtc 727
>gb|AF184280.1|AF184280 Oryza sativa polyubiquitin (RUBQ2) gene, complete cds Length = 4442 Score = 135 bits (68), Expect = 2e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||| |||||| ||||||||||||||||||||||||||| Sbjct: 3725 ggcaagaccatcaccctggaggttgagagctcggacaccatcgacaacgtcaaggccaag 3784 Query: 106 atccaggacaaggagggcattcccccagaccagca 140 |||||||||||||||||||| |||||||||||||| Sbjct: 3785 atccaggacaaggagggcatccccccagaccagca 3819 Score = 125 bits (63), Expect = 2e-25 Identities = 152/182 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||| ||| || ||||||||||| |||||| Sbjct: 3491 ctgaccggcaagaccatcaccctcgaggtggagtcttctgataccatcgacaatgtcaag 3550 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||||||||| |||||||| | || || |||||||| Sbjct: 3551 gccaagatccaggacaaggagggcattcccccggaccagcagcgcctcatctttgctggc 3610 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||| ||||| | || | ||||| |||||||| ||||| ||||| || ||| Sbjct: 3611 aagcagctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctc 3670 Query: 220 ca 221 || Sbjct: 3671 ca 3672 Score = 125 bits (63), Expect = 2e-25 Identities = 94/102 (92%), Gaps = 2/102 (1%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcanc-gacaccatcgacaacgtcaa 98 |||||||||||||||||||| |||||||| || | | | |||||||||||||||||||| Sbjct: 3263 ctgaccggcaagaccatcaccctcgaggtgga-atcttctgacaccatcgacaacgtcaa 3321 Query: 99 ggccaagatccaggacaaggagggcattcccccagaccagca 140 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 3322 ggccaagatccaggacaaggagggcattcccccggaccagca 3363 Score = 107 bits (54), Expect = 5e-20 Identities = 60/62 (96%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 3074 gacaccatcgacaacgtcaaggccaagatccaggacaaagagggcatccccccagaccag 3133 Query: 139 ca 140 || Sbjct: 3134 ca 3135 Score = 99.6 bits (50), Expect = 1e-17 Identities = 142/173 (82%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| | ||||| |||||| ||||||||| || || || |||||||||||| Sbjct: 3956 aagaccatcactttggaggttgagagctccgacaccattgataatgtgaaggccaagatc 4015 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||||||||| ||||||||||||||||| | || || || ||||| |||||| || Sbjct: 4016 caggacaaggaggggattcccccagaccagcagcgtctgatcttcgctggcaagcagctg 4075 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 || ||||| || || | || || |||||||| ||||| ||||| || ||||| Sbjct: 4076 gaggatggacgcaccctcgccgactacaacatccagaaggagtccaccctcca 4128 Score = 87.7 bits (44), Expect = 4e-14 Identities = 142/175 (81%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||| ||||| |||||||| ||| | ||||||||||| || ||||||| Sbjct: 2808 tgaccggcaagactatcaccctcgaggtggagtcctctgacaccatcgataatgtcaagg 2867 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 | |||||||| || ||||||||||| ||||| |||||||| | || || || ||||| | Sbjct: 2868 ctaagatccaagataaggagggcatccccccggaccagcagcgtctcatcttcgctggca 2927 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 ||||| |||| ||||| | || | ||||| |||||||| ||||| |||||||| Sbjct: 2928 agcagctggaggatggcaggacccttgctgactacaacatccagaaggagtcgac 2982
>gb|AF296832.1|T1M15 Arabidopsis thaliana BAC T1M15 Length = 89490 Score = 135 bits (68), Expect = 2e-28 Identities = 151/179 (84%) Strand = Plus / Minus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| |||||||| |||||| |||||||||||||| || ||||| |||||| Sbjct: 7415 aagaccatcactctcgaggttgagagctctgacaccatcgacaatgttaaggcaaagatc 7356 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 ||||||||||| |||||||| || ||||||||||| | || || ||||| |||||| | Sbjct: 7355 caggacaaggaaggcattcctcctgaccagcaaagattgatcttcgctggtaagcagcta 7296 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggt 227 |||||||| || || || |||||||||||||| |||||||| || || ||||| ||||| Sbjct: 7295 gaagatggccgcaccttggctgattacaacatccagaaagaatcaacactccacttggt 7237 Score = 83.8 bits (42), Expect = 7e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| || |||||||||||||| ||||||||||||||||| || || || || |||||| Sbjct: 7157 gacactattgacaacgtcaaggcaaagatccaggacaaggaaggaatccctccggaccag 7098 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgg 176 ||||| || ||||| ||||| |||||| | |||||||| Sbjct: 7097 caaagacttattttcgctggtaagcagcttgaagatgg 7060 Score = 83.8 bits (42), Expect = 7e-13 Identities = 143/177 (80%) Strand = Plus / Minus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||| ||||| | ||||| |||||| ||||| ||||| || |||||||| ||| Sbjct: 6734 ggcaagactatcactttggaggttgagagctcagacacaatcgataatgtcaaggcaaag 6675 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 || || |||||||| || ||||| ||||| ||||| || || || ||||||||||| ||| Sbjct: 6674 attcaagacaaggaagggattccaccagatcagcagagactcatatttgctggaaaacag 6615 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 | |||||||| || ||| | |||||||||||||| || || ||||| || |||||| Sbjct: 6614 cttgaagatggacgcacactcgctgattacaacatccaaaaggagtctaccctccat 6558 Score = 67.9 bits (34), Expect = 4e-08 Identities = 138/173 (79%) Strand = Plus / Minus Query: 55 atcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatccaggac 114 ||||| || ||||| |||||| |||||||| ||||| ||||| || |||||||| || Sbjct: 6953 atcacccttgaggttgagagctcagacaccattgacaatgtcaaagctaagatccaagat 6894 Query: 115 aaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttggaagat 174 || ||||| || || || |||||||| ||||| || ||||| || |||||| | || ||| Sbjct: 6893 aaagagggaatcccaccggaccagcagaggcttatctttgccggtaagcagctagaggat 6834 Query: 175 gggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggt 227 || || || | |||||||||||||| || |||||||| || || |||||||| Sbjct: 6833 ggtcgcactcttgctgattacaacatccaaaaagagtcaacccttcatttggt 6781 Score = 44.1 bits (22), Expect = 0.57 Identities = 97/122 (79%) Strand = Plus / Minus Query: 94 gtcaaggccaagatccaggacaaggagggcattcccccagaccagcaaaggctaattttt 153 |||||||| ||||| ||||||||||| || || || || ||||| || || || || || Sbjct: 6458 gtcaaggctaagattcaggacaaggaagggatcccaccggaccaacagagactcatcttc 6399 Query: 154 gctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcg 213 ||||| |||||| | || ||||| || || | || ||||||||||| ||||| |||||| Sbjct: 6398 gctgggaagcagcttgaggatggtcggactcttgcagattacaacatccagaaggagtcg 6339 Query: 214 ac 215 || Sbjct: 6338 ac 6337
>gb|BC093445.1| Homo sapiens cDNA clone IMAGE:5284302, partial cds Length = 2207 Score = 135 bits (68), Expect = 2e-28 Identities = 142/167 (85%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||||||||| |||||||| || ||| Sbjct: 323 ggcaagaccatcacccttgaggtcgagcccagtgacaccatcgagaacgtcaaagcaaag 382 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 383 atccaggacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 442 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 443 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 489 Score = 119 bits (60), Expect = 1e-23 Identities = 140/167 (83%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||| ||||| |||||||| || ||| Sbjct: 779 ggcaagaccatcacccttgaggtcgagcccagtgacactatcgagaacgtcaaagcaaag 838 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||| |||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 839 atccaagacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 898 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 899 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 945 Score = 115 bits (58), Expect = 2e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 89 ctgactggtaagaccatcaccctcgaggttgagcccagtgacaccatcgagaatgtcaag 148 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || |||||||| ||||| || ||||||||| Sbjct: 149 gcaaagatccaagataaggaaggcatccctcctgaccagcagaggctgatctttgctgga 208 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 209 aaacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 261 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 545 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 604 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| |||||||| || || ||||| ||| | || ||||| ||| Sbjct: 605 gcaaagatccaagataaggaaggcattcctcctgatcagcagaggttgatctttgccgga 664 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 665 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 717 Score = 89.7 bits (45), Expect = 1e-14 Identities = 155/192 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 1913 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 1972 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || || ||||| ||| | || |||||||| Sbjct: 1973 gcaaagatccaagataaggaaggcatccctcctgatcagcagaggttgatctttgctggg 2032 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 || ||| |||||||||| || || | |||| |||||||| ||||||||||| || || Sbjct: 2033 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtccactctg 2092 Query: 220 catttggtcctg 231 || ||||||||| Sbjct: 2093 cacttggtcctg 2104 Score = 83.8 bits (42), Expect = 7e-13 Identities = 140/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| | |||||||| || || |||||| Sbjct: 1229 ctgactggtaagaccatcactctcgaggtggagccgagtgacaccattgagaatgtcaag 1288 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1289 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1348 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1349 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1401 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 1685 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1744 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1745 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1804 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1805 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1857 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 1457 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1516 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1517 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1576 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1577 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1629 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 1001 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1060 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || ||||| ||| Sbjct: 1061 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgccgga 1120 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1121 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 1173
>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_G05 Length = 141860 Score = 135 bits (68), Expect = 2e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||| |||||| ||||||||||||||||||||||||||| Sbjct: 89936 ggcaagaccatcaccctggaggttgagagctcggacaccatcgacaacgtcaaggccaag 89877 Query: 106 atccaggacaaggagggcattcccccagaccagca 140 |||||||||||||||||||| |||||||||||||| Sbjct: 89876 atccaggacaaggagggcatccccccagaccagca 89842 Score = 125 bits (63), Expect = 2e-25 Identities = 94/102 (92%), Gaps = 2/102 (1%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcanc-gacaccatcgacaacgtcaa 98 |||||||||||||||||||| |||||||| || | | | |||||||||||||||||||| Sbjct: 90398 ctgaccggcaagaccatcaccctcgaggtgga-atcttctgacaccatcgacaacgtcaa 90340 Query: 99 ggccaagatccaggacaaggagggcattcccccagaccagca 140 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 90339 ggccaagatccaggacaaggagggcattcccccggaccagca 90298 Score = 125 bits (63), Expect = 2e-25 Identities = 152/182 (83%) Strand = Plus / Minus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||| ||| || ||||||||||| |||||| Sbjct: 90170 ctgaccggcaagaccatcaccctcgaggtggagtcttctgataccatcgacaatgtcaag 90111 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||||||||| |||||||| | || || |||||||| Sbjct: 90110 gccaagatccaggacaaggagggcattcccccggaccagcagcgcctcatctttgctggc 90051 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||| ||||| | || | ||||| |||||||| ||||| ||||| || ||| Sbjct: 90050 aagcagctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctc 89991 Query: 220 ca 221 || Sbjct: 89990 ca 89989 Score = 107 bits (54), Expect = 5e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 90587 gacaccatcgacaacgtcaaggccaagatccaggacaaagagggcatccccccagaccag 90528 Query: 139 ca 140 || Sbjct: 90527 ca 90526 Score = 99.6 bits (50), Expect = 1e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| | ||||| |||||| ||||||||| || || || |||||||||||| Sbjct: 89705 aagaccatcactttggaggttgagagctccgacaccattgataatgtgaaggccaagatc 89646 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||||||||| ||||||||||||||||| | || || || ||||| |||||| || Sbjct: 89645 caggacaaggaggggattcccccagaccagcagcgtctgatcttcgctggcaagcagctg 89586 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 || ||||| || || | || || |||||||| ||||| ||||| || ||||| Sbjct: 89585 gaggatggacgcaccctcgccgactacaacatccagaaggagtccaccctcca 89533 Score = 87.7 bits (44), Expect = 4e-14 Identities = 142/175 (81%) Strand = Plus / Minus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||| ||||| |||||||| ||| | ||||||||||| || ||||||| Sbjct: 90853 tgaccggcaagactatcaccctcgaggtggagtcctctgacaccatcgataatgtcaagg 90794 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 | |||||||| || ||||||||||| ||||| |||||||| | || || || ||||| | Sbjct: 90793 ctaagatccaagataaggagggcatccccccggaccagcagcgtctcatcttcgctggca 90734 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 ||||| |||| ||||| | || | ||||| |||||||| ||||| |||||||| Sbjct: 90733 agcagctggaggatggcaggacccttgctgactacaacatccagaaggagtcgac 90679
>dbj|AB089613.1| Homo sapiens UbC gene for polyubiquitin C, complete cds Length = 2058 Score = 135 bits (68), Expect = 2e-28 Identities = 142/167 (85%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||||||||| |||||||| || ||| Sbjct: 256 ggcaagaccatcacccttgaggtcgagcccagtgacaccatcgagaacgtcaaagcaaag 315 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 316 atccaggacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 375 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 376 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 422 Score = 119 bits (60), Expect = 1e-23 Identities = 140/167 (83%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||| ||||| |||||||| || ||| Sbjct: 712 ggcaagaccatcacccttgaggtcgagcccagtgacactatcgagaacgtcaaagcaaag 771 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||| |||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 772 atccaagacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 831 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 832 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 878 Score = 115 bits (58), Expect = 2e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 22 ctgactggtaagaccatcaccctcgaggttgagcccagtgacaccatcgagaatgtcaag 81 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || |||||||| ||||| || ||||||||| Sbjct: 82 gcaaagatccaagataaggaaggcatccctcctgaccagcagaggctgatctttgctgga 141 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 142 aaacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 194 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 478 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 537 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| |||||||| || || ||||| ||| | || ||||| ||| Sbjct: 538 gcaaagatccaagataaggaaggcattcctcctgatcagcagaggttgatctttgccgga 597 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 598 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 650 Score = 89.7 bits (45), Expect = 1e-14 Identities = 155/192 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 1846 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 1905 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || || ||||| ||| | || |||||||| Sbjct: 1906 gcaaagatccaagataaggaaggcatccctcctgatcagcagaggttgatctttgctggg 1965 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 || ||| |||||||||| || || | |||| |||||||| ||||||||||| || || Sbjct: 1966 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtccactctg 2025 Query: 220 catttggtcctg 231 || ||||||||| Sbjct: 2026 cacttggtcctg 2037 Score = 83.8 bits (42), Expect = 7e-13 Identities = 140/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| | |||||||| || || |||||| Sbjct: 1162 ctgactggtaagaccatcactctcgaggtggagccgagtgacaccattgagaatgtcaag 1221 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1222 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1281 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1282 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1334 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 1618 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1677 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1678 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1737 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1738 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1790 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 1390 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1449 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1450 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1509 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1510 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1562 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 934 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 993 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || ||||| ||| Sbjct: 994 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgccgga 1053 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1054 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 1106
>dbj|AK129749.1| Homo sapiens cDNA FLJ26238 fis, clone CBR05440, highly similar to Rattus norvegicus ubiquitin C (Ubc) Length = 2191 Score = 135 bits (68), Expect = 2e-28 Identities = 142/167 (85%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||||||||| |||||||| || ||| Sbjct: 323 ggcaagaccatcacccttgaggtcgagcccagtgacaccatcgagaacgtcaaagcaaag 382 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 383 atccaggacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 442 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 443 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 489 Score = 119 bits (60), Expect = 1e-23 Identities = 140/167 (83%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||| ||||| |||||||| || ||| Sbjct: 779 ggcaagaccatcacccttgaggtcgagcccagtgacactatcgagaacgtcaaagcaaag 838 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||| |||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 839 atccaagacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 898 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 899 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 945 Score = 115 bits (58), Expect = 2e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 89 ctgactggtaagaccatcaccctcgaggttgagcccagtgacaccatcgagaatgtcaag 148 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || |||||||| ||||| || ||||||||| Sbjct: 149 gcaaagatccaagataaggaaggcatccctcctgaccagcagaggctgatctttgctgga 208 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 209 aaacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 261 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 545 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 604 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| |||||||| || || ||||| ||| | || ||||| ||| Sbjct: 605 gcaaagatccaagataaggaaggcattcctcctgatcagcagaggttgatctttgccgga 664 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 665 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 717 Score = 89.7 bits (45), Expect = 1e-14 Identities = 155/192 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 1913 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 1972 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || || ||||| ||| | || |||||||| Sbjct: 1973 gcaaagatccaagataaggaaggcatccctcctgatcagcagaggttgatctttgctggg 2032 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 || ||| |||||||||| || || | |||| |||||||| ||||||||||| || || Sbjct: 2033 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtccactctg 2092 Query: 220 catttggtcctg 231 || ||||||||| Sbjct: 2093 cacttggtcctg 2104 Score = 83.8 bits (42), Expect = 7e-13 Identities = 140/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| | |||||||| || || |||||| Sbjct: 1229 ctgactggtaagaccatcactctcgaggtggagccgagtgacaccattgagaatgtcaag 1288 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1289 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1348 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1349 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1401 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 1457 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1516 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1517 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1576 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1577 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1629 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 1001 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1060 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || ||||| ||| Sbjct: 1061 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgccgga 1120 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1121 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 1173 Score = 67.9 bits (34), Expect = 4e-08 Identities = 138/173 (79%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 1685 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1744 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || ||||| || |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1745 gcaaagattcaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1804 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1805 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1857
>dbj|AK101547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M20, full insert sequence Length = 1642 Score = 135 bits (68), Expect = 2e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||| |||||| ||||||||||||||||||||||||||| Sbjct: 1022 ggcaagaccatcaccctggaggttgagagctcggacaccatcgacaacgtcaaggccaag 1081 Query: 106 atccaggacaaggagggcattcccccagaccagca 140 |||||||||||||||||||| |||||||||||||| Sbjct: 1082 atccaggacaaggagggcatccccccagaccagca 1116 Score = 125 bits (63), Expect = 2e-25 Identities = 152/182 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||| ||| || ||||||||||| |||||| Sbjct: 788 ctgaccggcaagaccatcaccctcgaggtggagtcttctgataccatcgacaatgtcaag 847 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||||||||| |||||||| | || || |||||||| Sbjct: 848 gccaagatccaggacaaggagggcattcccccggaccagcagcgcctcatctttgctggc 907 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||| ||||| | || | ||||| |||||||| ||||| ||||| || ||| Sbjct: 908 aagcagctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctc 967 Query: 220 ca 221 || Sbjct: 968 ca 969 Score = 125 bits (63), Expect = 2e-25 Identities = 94/102 (92%), Gaps = 2/102 (1%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcanc-gacaccatcgacaacgtcaa 98 |||||||||||||||||||| |||||||| || | | | |||||||||||||||||||| Sbjct: 560 ctgaccggcaagaccatcaccctcgaggtgga-atcttctgacaccatcgacaacgtcaa 618 Query: 99 ggccaagatccaggacaaggagggcattcccccagaccagca 140 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 619 ggccaagatccaggacaaggagggcattcccccggaccagca 660 Score = 107 bits (54), Expect = 5e-20 Identities = 60/62 (96%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 371 gacaccatcgacaacgtcaaggccaagatccaggacaaagagggcatccccccagaccag 430 Query: 139 ca 140 || Sbjct: 431 ca 432 Score = 99.6 bits (50), Expect = 1e-17 Identities = 142/173 (82%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| | ||||| |||||| ||||||||| || || || |||||||||||| Sbjct: 1253 aagaccatcactttggaggttgagagctccgacaccattgataatgtgaaggccaagatc 1312 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||||||||| ||||||||||||||||| | || || || ||||| |||||| || Sbjct: 1313 caggacaaggaggggattcccccagaccagcagcgtctgatcttcgctggcaagcagctg 1372 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 || ||||| || || | || || |||||||| ||||| ||||| || ||||| Sbjct: 1373 gaggatggacgcaccctcgccgactacaacatccagaaggagtccaccctcca 1425 Score = 87.7 bits (44), Expect = 4e-14 Identities = 142/175 (81%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||| ||||| |||||||| ||| | ||||||||||| || ||||||| Sbjct: 105 tgaccggcaagactatcaccctcgaggtggagtcctctgacaccatcgataatgtcaagg 164 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 | |||||||| || ||||||||||| ||||| |||||||| | || || || ||||| | Sbjct: 165 ctaagatccaagataaggagggcatccccccggaccagcagcgtctcatcttcgctggca 224 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 ||||| |||| ||||| | || | ||||| |||||||| ||||| |||||||| Sbjct: 225 agcagctggaggatggcaggacccttgctgactacaacatccagaaggagtcgac 279
>gb|AC012477.1|AC012477 Genomic Sequence For Arabidopsis thaliana Clone C6L9, Chromosome IV, complete sequence Length = 145453 Score = 135 bits (68), Expect = 2e-28 Identities = 163/195 (83%) Strand = Plus / Minus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| |||||||||||||||||| |||||| Sbjct: 58259 accggaaagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggcc 58200 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| |||||||||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 58199 aagatccaggataaggagggcattcctccggatcagcagaggcttattttcgccggcaag 58140 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || || ||||||||||| || ||||| || || || ||||| Sbjct: 58139 cagctagaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 58080 Query: 223 ttggtcctgaggctc 237 |||||||| |||||| Sbjct: 58079 ttggtcctcaggctc 58065 Score = 111 bits (56), Expect = 3e-21 Identities = 157/191 (82%) Strand = Plus / Minus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||||||||| || || || || ||| ||||||||| ||||||||||||| Sbjct: 57121 tgaccggaaagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaagg 57062 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||| || ||||| || |||||||| | || || || ||||||| Sbjct: 57061 ccaagatccaggacaaggaaggtattcctccggaccagcagcgtctcatcttcgctggaa 57002 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || || || || |||||||| ||||| ||||| || || | Sbjct: 57001 agcagcttgaggatggacgtactttggccgactacaacatccagaaggagtctactcttc 56942 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 56941 acttggtcctg 56931 Score = 107 bits (54), Expect = 5e-20 Identities = 87/98 (88%) Strand = Plus / Minus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 57995 gacaccatcgacaacgtcaaggccaagatccaagacaaagagggtattcctccggaccag 57936 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgg 176 || ||||| || || || |||||||||||||| ||||| Sbjct: 57935 cagaggctgatcttcgccggaaagcagttggaggatgg 57898 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Minus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| | ||||| |||||| |||||||| |||||||| |||||| Sbjct: 57347 accggaaagactatcactttggaggtagagagctctgacaccattgacaacgtgaaggcc 57288 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||| || || || || |||||||| ||| | || ||||| ||||| Sbjct: 57287 aagatccaggataaggaaggaatccctccggaccagcagaggttgatctttgccggaaaa 57228 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 || ||||| ||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 57227 caattggaggatggtcgtactttggcggattacaacatccagaaggagtcgac 57175 Score = 69.9 bits (35), Expect = 1e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||||||||| | ||||| ||||| |||||||| || ||||| || ||| Sbjct: 57575 accggaaagaccatcactttggaggtggagagttctgacaccattgataacgtgaaagcc 57516 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||||||||| ||||| || || || |||||||| || | || || || |||||| Sbjct: 57515 aagatccaggacaaagagggtatcccaccggaccagcagagattgatcttcgccggaaag 57456 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || | |||||||| |||| || ||||| |||||||||||||| ||||| Sbjct: 57455 caacttgaagatggaagaactttggctgactacaacattcagaaggagtc 57406 Score = 60.0 bits (30), Expect = 1e-05 Identities = 120/150 (80%) Strand = Plus / Minus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| || ||||| || ||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 57767 gacaccattgataacgtgaaagccaagatccaagacaaagagggtattcctccggaccag 57708 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || || | || || || ||||| || | |||||||| |||| || || || |||||| Sbjct: 57707 cagagattgatcttcgccggaaaacaacttgaagatggcagaactttggccgactacaac 57648 Query: 199 attcagaaagagtcgacgctccatttggtc 228 |||||||| ||||| || ||||| |||||| Sbjct: 57647 attcagaaggagtccacactccacttggtc 57618
>gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana clone C17L7, Chromosome IV, complete sequence Length = 183147 Score = 135 bits (68), Expect = 2e-28 Identities = 163/195 (83%) Strand = Plus / Minus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| |||||||||||||||||| |||||| Sbjct: 2511 accggaaagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggcc 2452 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| |||||||||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 2451 aagatccaggataaggagggcattcctccggatcagcagaggcttattttcgccggcaag 2392 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || || ||||||||||| || ||||| || || || ||||| Sbjct: 2391 cagctagaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 2332 Query: 223 ttggtcctgaggctc 237 |||||||| |||||| Sbjct: 2331 ttggtcctcaggctc 2317 Score = 111 bits (56), Expect = 3e-21 Identities = 160/195 (82%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| ||||||||||||||||| |||||| Sbjct: 132158 accggaaagactatcaccctcgaggtggaaagctctgacaccatcgacaacgttaaggcc 132217 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||| || ||||| || || ||||| ||||| || || || |||||| Sbjct: 132218 aagatccaggataaggaaggtattcctccggatcagcagaggcttatcttcgccggaaag 132277 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 |||||||| ||||| || || || || |||||||| || ||||| || || || ||||| Sbjct: 132278 cagttggaggatggccgcacgttggcggattacaatatccagaaggaatccaccctccac 132337 Query: 223 ttggtcctgaggctc 237 ||||| || |||||| Sbjct: 132338 ttggttctcaggctc 132352 Score = 107 bits (54), Expect = 5e-20 Identities = 87/98 (88%) Strand = Plus / Minus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 2247 gacaccatcgacaacgtcaaggccaagatccaagacaaagagggtattcctccggaccag 2188 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgg 176 || ||||| || || || |||||||||||||| ||||| Sbjct: 2187 cagaggctgatcttcgccggaaagcagttggaggatgg 2150 Score = 103 bits (52), Expect = 7e-19 Identities = 157/191 (82%), Gaps = 1/191 (0%) Strand = Plus / Minus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||||||||| || || || || ||| ||||||||| ||||||||||||| Sbjct: 1373 tgaccggaaagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaagg 1314 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||| || ||||| || |||||||| | || || || ||||||| Sbjct: 1313 ccaagatccaggacaagga-ggtattcctccggaccagcagcgtctcatcttcgctggaa 1255 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || || || || |||||||| ||||| ||||| || || | Sbjct: 1254 agcagcttgaggatggacgtactttggccgactacaacatccagaaggagtctactcttc 1195 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 1194 acttggtcctg 1184 Score = 101 bits (51), Expect = 3e-18 Identities = 155/190 (81%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||||||||| || || || |||||| ||||||||| || ||||| |||| Sbjct: 132612 tgaccggaaagaccatcactcttgaagttgagagctccgacaccattgataacgtgaagg 132671 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 | ||||||||||||||||| |||||||| || |||||||| | || || || ||||||| Sbjct: 132672 ctaagatccaggacaaggaaggcattcctccggaccagcagcgtctcatcttcgctggaa 132731 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || || || || |||||||| ||||| ||||| || || | Sbjct: 132732 agcagcttgaggatggacgtactttggccgactacaacatccagaaggagtctactcttc 132791 Query: 221 atttggtcct 230 | |||||||| Sbjct: 132792 acttggtcct 132801 Score = 91.7 bits (46), Expect = 3e-15 Identities = 124/150 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| ||||||||||||||||||||||| || |||||||| ||||| || |||||| Sbjct: 132422 gacaccattgacaacgtcaaggccaagatccaagataaggagggtattcctccggaccag 132481 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||| | || || || |||||||| | || || || |||| || || ||||||||| Sbjct: 132482 cagaggttgatcttcgccggaaagcaacttgaggacggcagaactttggcggattacaac 132541 Query: 199 attcagaaagagtcgacgctccatttggtc 228 || ||||| ||||| ||||| ||||||||| Sbjct: 132542 atccagaaggagtctacgcttcatttggtc 132571 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Minus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| | ||||| |||||| |||||||| |||||||| |||||| Sbjct: 1599 accggaaagactatcactttggaggtagagagctctgacaccattgacaacgtgaaggcc 1540 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||| || || || || |||||||| ||| | || ||||| ||||| Sbjct: 1539 aagatccaggataaggaaggaatccctccggaccagcagaggttgatctttgccggaaaa 1480 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 || ||||| ||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 1479 caattggaggatggtcgtactttggcggattacaacatccagaaggagtcgac 1427 Score = 69.9 bits (35), Expect = 1e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||||||||| | ||||| ||||| |||||||| || ||||| || ||| Sbjct: 1827 accggaaagaccatcactttggaggtggagagttctgacaccattgataacgtgaaagcc 1768 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||||||||| ||||| || || || |||||||| || | || || || |||||| Sbjct: 1767 aagatccaggacaaagagggtatcccaccggaccagcagagattgatcttcgccggaaag 1708 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || | |||||||| |||| || ||||| |||||||||||||| ||||| Sbjct: 1707 caacttgaagatggaagaactttggctgactacaacattcagaaggagtc 1658 Score = 60.0 bits (30), Expect = 1e-05 Identities = 120/150 (80%) Strand = Plus / Minus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| || ||||| || ||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 2019 gacaccattgataacgtgaaagccaagatccaagacaaagagggtattcctccggaccag 1960 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || || | || || || ||||| || | |||||||| |||| || || || |||||| Sbjct: 1959 cagagattgatcttcgccggaaaacaacttgaagatggcagaactttggccgactacaac 1900 Query: 199 attcagaaagagtcgacgctccatttggtc 228 |||||||| ||||| || ||||| |||||| Sbjct: 1899 attcagaaggagtccacactccacttggtc 1870
>dbj|AK061956.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F08, full insert sequence Length = 1640 Score = 135 bits (68), Expect = 2e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||| |||||| ||||||||||||||||||||||||||| Sbjct: 1019 ggcaagaccatcaccctggaggttgagagctcggacaccatcgacaacgtcaaggccaag 1078 Query: 106 atccaggacaaggagggcattcccccagaccagca 140 |||||||||||||||||||| |||||||||||||| Sbjct: 1079 atccaggacaaggagggcatccccccagaccagca 1113 Score = 125 bits (63), Expect = 2e-25 Identities = 152/182 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||| ||| || ||||||||||| |||||| Sbjct: 785 ctgaccggcaagaccatcaccctcgaggtggagtcttctgataccatcgacaatgtcaag 844 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||||||||| |||||||| | || || |||||||| Sbjct: 845 gccaagatccaggacaaggagggcattcccccggaccagcagcgcctcatctttgctggc 904 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||| ||||| | || | ||||| |||||||| ||||| ||||| || ||| Sbjct: 905 aagcagctggaggatggcaggacccttgctgactacaacatccagaaggagtccaccctc 964 Query: 220 ca 221 || Sbjct: 965 ca 966 Score = 125 bits (63), Expect = 2e-25 Identities = 94/102 (92%), Gaps = 2/102 (1%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcanc-gacaccatcgacaacgtcaa 98 |||||||||||||||||||| |||||||| || | | | |||||||||||||||||||| Sbjct: 557 ctgaccggcaagaccatcaccctcgaggtgga-atcttctgacaccatcgacaacgtcaa 615 Query: 99 ggccaagatccaggacaaggagggcattcccccagaccagca 140 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 616 ggccaagatccaggacaaggagggcattcccccggaccagca 657 Score = 99.6 bits (50), Expect = 1e-17 Identities = 142/173 (82%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| | ||||| |||||| ||||||||| || || || |||||||||||| Sbjct: 1250 aagaccatcactttggaggttgagagctccgacaccattgataatgtgaaggccaagatc 1309 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 |||||||||||||| ||||||||||||||||| | || || || ||||| |||||| || Sbjct: 1310 caggacaaggaggggattcccccagaccagcagcgtctgatcttcgctggcaagcagctg 1369 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 || ||||| || || | || || |||||||| ||||| ||||| || ||||| Sbjct: 1370 gaggatggacgcaccctcgccgactacaacatccagaaggagtccaccctcca 1422 Score = 99.6 bits (50), Expect = 1e-17 Identities = 59/62 (95%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 368 gacaccatcgacaacgtcaaggccaagatccaggacaaagagggcacccccccagaccag 427 Query: 139 ca 140 || Sbjct: 428 ca 429 Score = 87.7 bits (44), Expect = 4e-14 Identities = 142/175 (81%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||| ||||| |||||||| ||| | ||||||||||| || ||||||| Sbjct: 102 tgaccggcaagactatcaccctcgaggtggagtcctctgacaccatcgataatgtcaagg 161 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 | |||||||| || ||||||||||| ||||| |||||||| | || || || ||||| | Sbjct: 162 ctaagatccaagataaggagggcatccccccggaccagcagcgtctcatcttcgctggca 221 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 ||||| |||| ||||| | || | ||||| |||||||| ||||| |||||||| Sbjct: 222 agcagctggaggatggcaggacccttgctgactacaacatccagaaggagtcgac 276
>dbj|AB003730.1| Homo sapiens gene for polyubiquitin, complete cds Length = 2291 Score = 135 bits (68), Expect = 2e-28 Identities = 142/167 (85%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||||||||| |||||||| || ||| Sbjct: 680 ggcaagaccatcacccttgaggtcgagcccagtgacaccatcgagaacgtcaaagcaaag 739 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 740 atccaggacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 799 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 800 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 846 Score = 119 bits (60), Expect = 1e-23 Identities = 140/167 (83%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||| ||||| |||||||| || ||| Sbjct: 1136 ggcaagaccatcacccttgaggtcgagcccagtgacactatcgagaacgtcaaagcaaag 1195 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||| |||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 1196 atccaagacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 1255 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1256 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1302 Score = 115 bits (58), Expect = 2e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 446 ctgactggtaagaccatcaccctcgaggttgagcccagtgacaccatcgagaatgtcaag 505 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || |||||||| ||||| || ||||||||| Sbjct: 506 gcaaagatccaagataaggaaggcatccctcctgaccagcagaggctgatctttgctgga 565 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 566 aaacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 618 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 902 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 961 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| |||||||| || || ||||| ||| | || ||||| ||| Sbjct: 962 gcaaagatccaagataaggaaggcattcctcctgatcagcagaggttgatctttgccgga 1021 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1022 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 1074 Score = 89.7 bits (45), Expect = 1e-14 Identities = 155/192 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 2042 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 2101 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || || ||||| ||| | || |||||||| Sbjct: 2102 gcaaagatccaagataaggaaggcatccctcctgatcagcagaggttgatctttgctggg 2161 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 || ||| |||||||||| || || | |||| |||||||| ||||||||||| || || Sbjct: 2162 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtccactctg 2221 Query: 220 catttggtcctg 231 || ||||||||| Sbjct: 2222 cacttggtcctg 2233 Score = 83.8 bits (42), Expect = 7e-13 Identities = 140/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| | |||||||| || || |||||| Sbjct: 1586 ctgactggtaagaccatcactctcgaggtggagccgagtgacaccattgagaatgtcaag 1645 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1646 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1705 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1706 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1758 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| || |||||||| |||||||| |||||||| ||||| || || |||||| Sbjct: 1853 gacaccatcgagaatgtcaaggcaaagatccaagacaaggaaggcatccctcctgaccag 1912 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||| | || ||||| || || ||| |||||||||| || || | |||| |||||| Sbjct: 1913 cagaggttgatctttgccgggaaacagctggaagatggacgcaccctgtctgactacaac 1972 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 1973 atccagaaagagtc 1986 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 1358 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1417 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || ||||| ||| Sbjct: 1418 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgccgga 1477 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1478 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 1530
>gb|U33014.1|ATU33014 Arabidopsis thaliana polyubiquitin (ubq4) gene, complete cds Length = 4056 Score = 135 bits (68), Expect = 2e-28 Identities = 151/179 (84%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| |||||||| |||||| |||||||||||||| || ||||| |||||| Sbjct: 2711 aagaccatcactctcgaggttgagagctctgacaccatcgacaatgttaaggcaaagatc 2770 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 ||||||||||| |||||||| || ||||||||||| | || || ||||| |||||| | Sbjct: 2771 caggacaaggaaggcattcctcctgaccagcaaagattgatcttcgctggtaagcagcta 2830 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggt 227 |||||||| || || || |||||||||||||| |||||||| || || ||||| ||||| Sbjct: 2831 gaagatggccgcaccttggctgattacaacatccagaaagaatcaaccctccacttggt 2889 Score = 83.8 bits (42), Expect = 7e-13 Identities = 143/177 (80%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||| ||||| | ||||| |||||| ||||| ||||| || |||||||| ||| Sbjct: 3392 ggcaagactatcactttggaggttgagagctcagacacaatcgataatgtcaaggcaaag 3451 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 || || |||||||| || ||||| ||||| ||||| || || || ||||||||||| ||| Sbjct: 3452 attcaagacaaggaagggattccaccagatcagcagagactcatatttgctggaaaacag 3511 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 | |||||||| || ||| | |||||||||||||| || || ||||| || |||||| Sbjct: 3512 cttgaagatggacgcacactcgctgattacaacatccaaaaggagtctaccctccat 3568 Score = 83.8 bits (42), Expect = 7e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| || |||||||||||||| ||||||||||||||||| || || || || |||||| Sbjct: 2969 gacactattgacaacgtcaaggcaaagatccaggacaaggaaggaatccctccggaccag 3028 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgg 176 ||||| || ||||| ||||| |||||| | |||||||| Sbjct: 3029 caaagacttattttcgctggtaagcagcttgaagatgg 3066 Score = 67.9 bits (34), Expect = 4e-08 Identities = 138/173 (79%) Strand = Plus / Plus Query: 55 atcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatccaggac 114 ||||| || ||||| |||||| |||||||| ||||| ||||| || |||||||| || Sbjct: 3173 atcacccttgaggttgagagctcagacaccattgacaatgtcaaagctaagatccaagat 3232 Query: 115 aaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttggaagat 174 || ||||| || || || |||||||| ||||| || ||||| || |||||| | || ||| Sbjct: 3233 aaagagggaatcccaccggaccagcagaggcttatctttgccggtaagcagctagaggat 3292 Query: 175 gggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggt 227 || || || | |||||||||||||| || |||||||| || || |||||||| Sbjct: 3293 ggtcgcactcttgctgattacaacatccaaaaagagtcaacccttcatttggt 3345 Score = 44.1 bits (22), Expect = 0.57 Identities = 97/122 (79%) Strand = Plus / Plus Query: 94 gtcaaggccaagatccaggacaaggagggcattcccccagaccagcaaaggctaattttt 153 |||||||| ||||| ||||||||||| || || || || ||||| || || || || || Sbjct: 3668 gtcaaggctaagattcaggacaaggaagggatcccaccggaccaacagagactcatcttc 3727 Query: 154 gctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcg 213 ||||| |||||| | || ||||| || || | || ||||||||||| ||||| |||||| Sbjct: 3728 gctgggaagcagcttgaggatggtcggactcttgcagattacaacatccagaaggagtcg 3787 Query: 214 ac 215 || Sbjct: 3788 ac 3789
>dbj|AB209782.1| Homo sapiens mRNA for ubiquitin C variant protein Length = 3996 Score = 135 bits (68), Expect = 2e-28 Identities = 142/167 (85%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||||||||| |||||||| || ||| Sbjct: 304 ggcaagaccatcacccttgaggtcgagcccagtgacaccatcgagaacgtcaaagcaaag 363 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 364 atccaggacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 423 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 424 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 470 Score = 127 bits (64), Expect = 5e-26 Identities = 141/167 (84%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||||||||| |||||||| || ||| Sbjct: 760 ggcaagaccatcacccttgaggtcgagcccagtgacaccatcgagaacgtcaaagcaaag 819 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||| |||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 820 atccaagacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 879 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 880 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 926 Score = 115 bits (58), Expect = 2e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| | ||||||||||| || |||||| Sbjct: 2578 ctgactggtaagaccatcactctcgaggtggagccgagtgacaccatcgagaatgtcaag 2637 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| |||||||| || |||||||| ||| | || ||||| ||| Sbjct: 2638 gcaaagatccaagacaaggaaggcattcctcctgaccagcagaggttgatctttgccgga 2697 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 2698 aagcagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 2750 Score = 115 bits (58), Expect = 2e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 70 ctgactggtaagaccatcaccctcgaggttgagcccagtgacaccatcgagaatgtcaag 129 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || |||||||| ||||| || ||||||||| Sbjct: 130 gcaaagatccaagataaggaaggcatccctcctgaccagcagaggctgatctttgctgga 189 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 190 aaacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 242 Score = 107 bits (54), Expect = 5e-20 Identities = 143/173 (82%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| | ||||||||||| || |||||| Sbjct: 1438 ctgactggtaagaccatcactctcgaggtggagccgagtgacaccatcgagaatgtcaag 1497 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || ||||||||| Sbjct: 1498 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctgga 1557 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1558 aaacagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 1610 Score = 99.6 bits (50), Expect = 1e-17 Identities = 142/173 (82%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 1894 ctgactggtaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtcaag 1953 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || ||||| ||| Sbjct: 1954 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgccgga 2013 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2014 aaacagctggaagatggtcgcaccctgtctgactacaacatccagaaagagtc 2066 Score = 99.6 bits (50), Expect = 1e-17 Identities = 142/173 (82%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 982 ctgactggtaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtcaag 1041 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || ||||| ||| Sbjct: 1042 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgccgga 1101 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1102 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1154 Score = 97.6 bits (49), Expect = 4e-17 Identities = 135/164 (82%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| |||||||||||| || |||||||| || || |||||||| |||||| Sbjct: 3043 aagaccatcactctcgaggtcgagcccagtgacaccattgagaatgtcaaggcaaagatc 3102 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 || |||||||| ||||| || || |||||||| ||| | || |||||||| || ||| || Sbjct: 3103 caagacaaggaaggcatccctcctgaccagcagaggttgatctttgctgggaaacagctg 3162 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||||| || || | |||| |||||||| ||||||||||| Sbjct: 3163 gaagatggacgcaccctgtctgactacaacatccagaaagagtc 3206 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || |||||||| || || |||||| Sbjct: 2122 ctgactggtaagaccatcactctcgaggtggagcccagtgacaccattgagaatgtcaag 2181 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || ||||| ||| Sbjct: 2182 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgccgga 2241 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2242 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 2294 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| || ||||| ||| || ||||||||||| || |||||| Sbjct: 1666 ctgactggtaagaccatcacccttgaggtggagcccagtgacaccatcgagaatgtcaag 1725 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || ||||| ||| Sbjct: 1726 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgccgga 1785 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1786 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1838 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 1210 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 1269 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || || ||||| ||| | || ||||||||| Sbjct: 1270 gcaaagatccaagataaggaaggcatccctcctgatcagcagaggttgatctttgctgga 1329 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1330 aaacagctggaagatggtcgcaccctgtctgactacaacatccagaaagagtc 1382 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 526 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 585 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| |||||||| || || ||||| ||| | || ||||| ||| Sbjct: 586 gcaaagatccaagataaggaaggcattcctcctgatcagcagaggttgatctttgccgga 645 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 646 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 698 Score = 83.8 bits (42), Expect = 7e-13 Identities = 140/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 2806 ctgactggtaagaccatcactctcgaggtggagcccagtgacaccatcgagaatgtcaag 2865 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || || ||||| ||| | || ||||| ||| Sbjct: 2866 gcaaagatccaagataaggaaggcatccctcctgatcagcagaggttgatctttgccgga 2925 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2926 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 2978 Score = 81.8 bits (41), Expect = 3e-12 Identities = 154/192 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 3718 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 3777 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || || ||||| ||| | || |||||||| Sbjct: 3778 gcaaagatccaagataaggaaggcatccctcctgatcagcagaggttgatctttgctggg 3837 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 || ||| ||||| |||| || || | |||| |||||||| ||||||||||| || || Sbjct: 3838 aaacagctggaaaatggacgcaccctgtctgactacaacatccagaaagagtccactctg 3897 Query: 220 catttggtcctg 231 || ||||||||| Sbjct: 3898 cacttggtcctg 3909 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 3490 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 3549 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 3550 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 3609 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 3610 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 3662 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 3262 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 3321 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 3322 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 3381 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 3382 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 3434 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 2350 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 2409 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 2410 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 2469 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 2470 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 2522
>gb|L05361.1|ATHUBQ10R Arabidopsis thaliana polyubiquitin (ubq10) mRNA, complete cds Length = 1577 Score = 135 bits (68), Expect = 2e-28 Identities = 163/195 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| |||||||||||||||||| |||||| Sbjct: 67 accggaaagacaatcaccctcgaggtggaaagctccgacaccatcgacaacgttaaggcc 126 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| |||||||||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 127 aagatccaggataaggagggcattcctccggatcagcagaggcttattttcgccggcaag 186 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || || ||||||||||| || ||||| || || || ||||| Sbjct: 187 cagctagaggatggccgtacgttggctgattacaatatccagaaggaatccaccctccac 246 Query: 223 ttggtcctgaggctc 237 |||||||| |||||| Sbjct: 247 ttggtcctcaggctc 261 Score = 111 bits (56), Expect = 3e-21 Identities = 157/191 (82%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||| ||||||||||| || || || || ||| ||||||||| ||||||||||||| Sbjct: 1205 tgaccggaaagaccatcacccttgaagtggaaagctccgacaccattgacaacgtcaagg 1264 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||| || ||||| || |||||||| | || || || ||||||| Sbjct: 1265 ccaagatccaggacaaggaaggtattcctccggaccagcagcgtctcatcttcgctggaa 1324 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| | || ||||| || || || || || |||||||| ||||| ||||| || || | Sbjct: 1325 agcagcttgaggatggacgtactttggccgactacaacatccagaaggagtctactcttc 1384 Query: 221 atttggtcctg 231 | ||||||||| Sbjct: 1385 acttggtcctg 1395 Score = 107 bits (54), Expect = 5e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 331 gacaccatcgacaacgtcaaggccaagatccaagacaaagagggtattcctccggaccag 390 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgg 176 || ||||| || || || |||||||||||||| ||||| Sbjct: 391 cagaggctgatcttcgccggaaagcagttggaggatgg 428 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| | ||||| |||||| |||||||| |||||||| |||||| Sbjct: 979 accggaaagactatcactttggaggtagagagctctgacaccattgacaacgtgaaggcc 1038 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||| || || || || |||||||| ||| | || ||||| ||||| Sbjct: 1039 aagatccaggataaggaaggaatccctccggaccagcagaggttgatctttgccggaaaa 1098 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 || ||||| ||||| || || || || ||||||||||| ||||| |||||||| Sbjct: 1099 caattggaggatggtcgtactttggcggattacaacatccagaaggagtcgac 1151 Score = 69.9 bits (35), Expect = 1e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||||||||| | ||||| ||||| |||||||| || ||||| || ||| Sbjct: 751 accggaaagaccatcactttggaggtggagagttctgacaccattgataacgtgaaagcc 810 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||||||||| ||||| || || || |||||||| || | || || || |||||| Sbjct: 811 aagatccaggacaaagagggtatcccaccggaccagcagagattgatcttcgccggaaag 870 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || | |||||||| |||| || ||||| |||||||||||||| ||||| Sbjct: 871 caacttgaagatggaagaactttggctgactacaacattcagaaggagtc 920 Score = 60.0 bits (30), Expect = 1e-05 Identities = 120/150 (80%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| || ||||| || ||||||||||| ||||| ||||| ||||| || |||||| Sbjct: 559 gacaccattgataacgtgaaagccaagatccaagacaaagagggtattcctccggaccag 618 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || || | || || || ||||| || | |||||||| |||| || || || |||||| Sbjct: 619 cagagattgatcttcgccggaaaacaacttgaagatggcagaactttggccgactacaac 678 Query: 199 attcagaaagagtcgacgctccatttggtc 228 |||||||| ||||| || ||||| |||||| Sbjct: 679 attcagaaggagtccacactccacttggtc 708
>gb|M26880.1|HUMUBI13 Human ubiquitin mRNA, complete cds Length = 2309 Score = 135 bits (68), Expect = 2e-28 Identities = 142/167 (85%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||| ||| || ||||||||||| ||||||||||| ||| Sbjct: 1759 ggcaagaccatcacccttgaggtggagcccagtgacaccatcgagaacgtcaaggcaaag 1818 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 1819 atccaggacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 1878 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 1879 ctggaagatgggcggaccctgtctgactacaacatccagaaagagtc 1925 Score = 127 bits (64), Expect = 5e-26 Identities = 141/167 (84%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || ||||||||| || ||||| ||||| ||||||||||| ||| Sbjct: 391 ggcaagaccatcacccttgaggtcgagcccagtgacacaatcgagaacgtcaaggcaaag 450 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||| |||||||| |||||||| || |||||||| ||| | || ||||| ||||||||| Sbjct: 451 atccaagacaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcag 510 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||||| || | |||| |||||||| ||||||||||| Sbjct: 511 ctggaagatgggcgcaccctgtctgactacaacatccagaaagagtc 557 Score = 107 bits (54), Expect = 5e-20 Identities = 143/173 (82%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 1525 ctgactggtaagaccatcaccctcgaggttgagcccagtgacaccatcgagaatgtcaag 1584 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || || ||||| ||| | || ||||||||| Sbjct: 1585 gcaaagatccaagataaggaaggcatccctcctgatcagcagaggttgatctttgctgga 1644 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| ||||||||||||| || | |||| |||||||||||||||||||| Sbjct: 1645 aaacagctggaagatgggcgcaccctgtctgactacaacattcagaaagagtc 1697 Score = 91.7 bits (46), Expect = 3e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| || ||||||||||| || |||||| Sbjct: 157 ctgactggtaagaccatcaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 216 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| |||||||| || || ||||| ||| | || ||||| ||| Sbjct: 217 gcaaagatccaagataaggaaggcattcctcctgatcagcagaggttgatctttgccgga 276 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 277 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 329 Score = 81.8 bits (41), Expect = 3e-12 Identities = 154/192 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || |||||||| || |||||||| ||| || ||||||||||| || |||||| Sbjct: 1981 ctgactggtaagaccattaccctcgaggtggagcccagtgacaccatcgagaatgtcaag 2040 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| || ||||| ||||| || || || ||||| ||| | || |||||||| Sbjct: 2041 gcaaagatccaagataaggaaggcatccctcctgatcagcagaggttgatctttgctggg 2100 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 || ||| |||||||||| || || | |||| |||||||| ||||||||||| || || Sbjct: 2101 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtccactctg 2160 Query: 220 catttggtcctg 231 || ||||||||| Sbjct: 2161 cacttggtcctg 2172 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 1297 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1356 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1357 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1416 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1417 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1469 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 1069 ctgactggtaagaccatcactctcgaagtggagccgagtgacaccattgagaatgtcaag 1128 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || |||||||| Sbjct: 1129 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgctggg 1188 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 1189 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1241 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| |||||||| ||| | |||||||| || || |||||| Sbjct: 841 ctgactggtaagaccatcactctcgaggtggagccgagtgacaccattgagaatgtcaag 900 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || || ||||| ||| | || |||||||| Sbjct: 901 gcaaagatccaagacaaggaaggcatccctcctgatcagcagaggttgatctttgctggg 960 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 961 aaacagctggaagatggacgcaccctgtctgactacaacatccagaaagagtc 1013 Score = 75.8 bits (38), Expect = 2e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| || ||||||||||| ||||| || ||| | |||||||| || || |||||| Sbjct: 613 ctgactggtaagaccatcaccctcgaagtggagccgagtgacaccattgagaatgtcaag 672 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || |||||||| |||||||| ||||| || || |||||||| ||| | || ||||| ||| Sbjct: 673 gcaaagatccaagacaaggaaggcatccctcctgaccagcagaggttgatctttgccgga 732 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 || ||| |||||||||| || || | |||| |||||||| ||||||||||| Sbjct: 733 aaacagctggaagatggtcgtaccctgtctgactacaacatccagaaagagtc 785
>gb|M18159.1|PIGUBP Pig poly-ubiquitin mRNA, 3' end Length = 832 Score = 135 bits (68), Expect = 2e-28 Identities = 154/183 (84%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| || || || ||| || |||||||||||| ||||||||||| |||||| Sbjct: 565 aagaccatcaccctggaagtggagcccagcgacaccatcgagaacgtcaaggcgaagatc 624 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 ||||||||||| ||||| |||||||||||||| ||||| || ||||| || |||||| || Sbjct: 625 caggacaaggaaggcatccccccagaccagcagaggctgatctttgccgggaagcagctg 684 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggtc 228 ||||||||||| || | |||| |||||||| ||||| ||||| || || || |||||| Sbjct: 685 gaagatgggcgcaccctgtctgactacaacatccagaaggagtccaccctgcacttggtc 744 Query: 229 ctg 231 ||| Sbjct: 745 ctg 747 Score = 113 bits (57), Expect = 7e-22 Identities = 137/164 (83%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| || || || ||| || |||||||||||| || |||||||| |||||| Sbjct: 337 aagaccatcaccctggaagtggagcccagcgacaccatcgagaatgtcaaggcgaagatc 396 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 || |||||||| ||||| |||||||||||||| ||||| || ||||| || |||||| || Sbjct: 397 caagacaaggaaggcatccccccagaccagcagaggctgatctttgccgggaagcagctg 456 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 457 gaagatgggcgcaccctgtctgactacaacatccagaaggagtc 500 Score = 113 bits (57), Expect = 7e-22 Identities = 137/164 (83%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| || || || ||| || |||||||||||| || |||||||| |||||| Sbjct: 109 aagaccatcaccctggaagtggagcccagcgacaccatcgagaatgtcaaggcgaagatc 168 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 || |||||||| ||||| |||||||||||||| ||||| || ||||| || |||||| || Sbjct: 169 caagacaaggaaggcatccccccagaccagcagaggctgatctttgccgggaagcagctg 228 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtc 212 ||||||||||| || | |||| |||||||| ||||| ||||| Sbjct: 229 gaagatgggcgcaccctgtctgactacaacatccagaaggagtc 272
>dbj|AB035543.1| Microsporum canis mRNA for ubiquitin, complete cds Length = 740 Score = 135 bits (68), Expect = 2e-28 Identities = 124/143 (86%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| || ||||| ||| | ||| ||||| |||||||||||| Sbjct: 251 tgaccggcaagaccatcacccttgaggtggagtctagcgataccattgacaacgtcaaga 310 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||||||||| || |||||||||||| | || || |||||||||| Sbjct: 311 ccaagatccaggacaaggagggcatccctccagaccagcaacgtctcatctttgctggaa 370 Query: 161 agcagttggaagatgggcgaaca 183 ||||| | |||||||| |||||| Sbjct: 371 agcagctcgaagatggtcgaaca 393 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 82 accatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccagca 140 ||||||||||| || ||| ||||||| ||||||||||| || ||||||||||||||||| Sbjct: 64 accatcgacaatgttaagaccaagattcaggacaaggaaggaattcccccagaccagca 122
>ref|XM_847471.1| PREDICTED: Canis familiaris similar to ubiquitin B precursor (LOC610074), mRNA Length = 428 Score = 133 bits (67), Expect = 8e-28 Identities = 153/182 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 52 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgaaaacgtgaag 111 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 112 gccaagatccaggataaagagggcatcccccctgaccagcagaggctcatctttgcaggc 171 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||||||||| || || | ||||||||||||| |||||| |||| || ||| Sbjct: 172 aagcagctggaagatggccgcactctttctgattacaacatccagaaaaagtcaactctc 231 Query: 220 ca 221 || Sbjct: 232 ca 233
>ref|XM_858590.1| PREDICTED: Canis familiaris similar to ubiquitin B precursor, transcript variant 3 (LOC479513), mRNA Length = 743 Score = 133 bits (67), Expect = 8e-28 Identities = 171/206 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| || || ||| Sbjct: 349 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgaaaatgtgaag 408 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| || || |||||||| ||||| || ||||| || Sbjct: 409 gccaagatccaggataaagagggcatcccgcctgaccagcagaggctcatctttgcaggc 468 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||||||||| || || | ||||||||||||| ||||||||||| || ||| Sbjct: 469 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcaactctc 528 Query: 220 catttggtcctgaggctcaggggtgg 245 || |||||||| | || |||||||| Sbjct: 529 cacctggtcctgcgcctgaggggtgg 554 Score = 133 bits (67), Expect = 8e-28 Identities = 171/206 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| || || ||| Sbjct: 121 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgaaaatgtgaag 180 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| || || |||||||| ||||| || ||||| || Sbjct: 181 gccaagatccaggataaagagggcatcccgcctgaccagcagaggctcatctttgcaggc 240 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||||||||| || || | ||||||||||||| ||||||||||| || ||| Sbjct: 241 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcaactctc 300 Query: 220 catttggtcctgaggctcaggggtgg 245 || |||||||| | || |||||||| Sbjct: 301 cacctggtcctgcgcctgaggggtgg 326 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 188 ctgattacaacattcagaaagagtcgacgctccatttggtcctgaggctcaggggtgg 245 ||||||||||||| ||||||||||| || ||||| |||||||| | || |||||||| Sbjct: 41 ctgattacaacatccagaaagagtcaactctccacctggtcctgcgcctgaggggtgg 98
>ref|XM_536651.2| PREDICTED: Canis familiaris similar to ubiquitin B precursor, transcript variant 1 (LOC479513), mRNA Length = 881 Score = 133 bits (67), Expect = 8e-28 Identities = 171/206 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| || || ||| Sbjct: 487 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgaaaatgtgaag 546 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| || || |||||||| ||||| || ||||| || Sbjct: 547 gccaagatccaggataaagagggcatcccgcctgaccagcagaggctcatctttgcaggc 606 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||||||||| || || | ||||||||||||| ||||||||||| || ||| Sbjct: 607 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcaactctc 666 Query: 220 catttggtcctgaggctcaggggtgg 245 || |||||||| | || |||||||| Sbjct: 667 cacctggtcctgcgcctgaggggtgg 692 Score = 133 bits (67), Expect = 8e-28 Identities = 171/206 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| || || ||| Sbjct: 259 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgaaaatgtgaag 318 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| || || |||||||| ||||| || ||||| || Sbjct: 319 gccaagatccaggataaagagggcatcccgcctgaccagcagaggctcatctttgcaggc 378 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||||||||| || || | ||||||||||||| ||||||||||| || ||| Sbjct: 379 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcaactctc 438 Query: 220 catttggtcctgaggctcaggggtgg 245 || |||||||| | || |||||||| Sbjct: 439 cacctggtcctgcgcctgaggggtgg 464 Score = 127 bits (64), Expect = 5e-26 Identities = 168/203 (82%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||||||||| || ||||| ||| || ||||||||||| || || |||||| Sbjct: 34 accggcaagaccatcaccctggaggtggagcccagtgacaccatcgaaaatgtgaaggcc 93 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| || |||||||| || || |||||||| ||||| || ||||| || ||| Sbjct: 94 aagatccaggataaagagggcatcccgcctgaccagcagaggctcatctttgcaggcaag 153 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| |||||||||| || || | ||||||||||||| ||||||||||| || ||||| Sbjct: 154 cagctggaagatggccgcactctttctgattacaacatccagaaagagtcaactctccac 213 Query: 223 ttggtcctgaggctcaggggtgg 245 |||||||| | || |||||||| Sbjct: 214 ctggtcctgcgcctgaggggtgg 236
>ref|XM_858547.1| PREDICTED: Canis familiaris similar to ubiquitin B precursor, transcript variant 2 (LOC479513), mRNA Length = 707 Score = 133 bits (67), Expect = 8e-28 Identities = 171/206 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| || || ||| Sbjct: 335 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgaaaatgtgaag 394 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| || || |||||||| ||||| || ||||| || Sbjct: 395 gccaagatccaggataaagagggcatcccgcctgaccagcagaggctcatctttgcaggc 454 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||||||||| || || | ||||||||||||| ||||||||||| || ||| Sbjct: 455 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtcaactctc 514 Query: 220 catttggtcctgaggctcaggggtgg 245 || |||||||| | || |||||||| Sbjct: 515 cacctggtcctgcgcctgaggggtgg 540 Score = 127 bits (64), Expect = 5e-26 Identities = 168/203 (82%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||||||||| || ||||| ||| || ||||||||||| || || |||||| Sbjct: 26 accggcaagaccatcaccctggaggtggagcccagtgacaccatcgaaaatgtgaaggcc 85 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| || |||||||| || || |||||||| ||||| || ||||| || ||| Sbjct: 86 aagatccaggataaagagggcatcccgcctgaccagcagaggctcatctttgcaggcaag 145 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| |||||||||| || || | ||||||||||||| ||||||||||| || ||||| Sbjct: 146 cagctggaagatggccgcactctttctgattacaacatccagaaagagtcaactctccac 205 Query: 223 ttggtcctgaggctcaggggtgg 245 |||||||| | || |||||||| Sbjct: 206 ctggtcctgcgcctgaggggtgg 228 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcac 59 |||||||||||||||||||| Sbjct: 251 ctgaccggcaagaccatcac 270
>gb|AF361365.1| Oncorhynchus mykiss polyubiquitin mRNA, complete cds Length = 1162 Score = 133 bits (67), Expect = 8e-28 Identities = 90/98 (91%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||||||||| || ||||||||| || ||||||||||| |||||||||||| Sbjct: 765 accggcaagaccatcaccctggaggtcgagcccagtgacaccatcgagaacgtcaaggcc 824 Query: 103 aagatccaggacaaggagggcattcccccagaccagca 140 ||||||||||||||||||||||| |||||||||||||| Sbjct: 825 aagatccaggacaaggagggcatccccccagaccagca 862 Score = 117 bits (59), Expect = 5e-23 Identities = 88/98 (89%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||||||||| || ||||||||| || ||||||||||| || || |||||| Sbjct: 81 accggcaagaccatcaccctggaggtcgagcccagtgacaccatcgagaatgtgaaggcc 140 Query: 103 aagatccaggacaaggagggcattcccccagaccagca 140 ||||||||||||||||||||||| |||||||||||||| Sbjct: 141 aagatccaggacaaggagggcatccccccagaccagca 178 Score = 101 bits (51), Expect = 3e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||||||||| || ||||| ||| || |||||||| || || || |||||| Sbjct: 537 accggcaagaccatcaccctggaggttgagcccagtgacaccattgagaatgtgaaggcc 596 Query: 103 aagatccaggacaaggagggcattcccccagaccagca 140 ||||||||||||||||||||||| |||||||||||||| Sbjct: 597 aagatccaggacaaggagggcatccccccagaccagca 634 Score = 101 bits (51), Expect = 3e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||||||||| || ||||| ||| || |||||||| || || || |||||| Sbjct: 309 accggcaagaccatcaccctggaggttgagcccagtgacaccattgagaatgtgaaggcc 368 Query: 103 aagatccaggacaaggagggcattcccccagaccagca 140 ||||||||||||||||||||||| |||||||||||||| Sbjct: 369 aagatccaggacaaggagggcatccccccagaccagca 406
>gb|DQ103694.1| Ictalurus punctatus polyubiquitin mRNA, partial cds Length = 576 Score = 133 bits (67), Expect = 8e-28 Identities = 153/182 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || |||||||| || || |||||| Sbjct: 46 ctgaccggcaagaccatcacccttgaggttgagcccagtgacaccattgagaatgtcaag 105 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||| ||||||||||| || |||||||||||||||||||| ||||| || |||||||| Sbjct: 106 gccaaaatccaggacaaagaaggcattcccccagaccagcagaggctgatctttgctggc 165 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||||||||| || || | |||| |||||||| ||||| ||||| || ||| Sbjct: 166 aagcagctggaagatggtcgcaccctgtctgactacaacatccagaaggagtccactctc 225 Query: 220 ca 221 || Sbjct: 226 ca 227
>gb|AY042884.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 927 Score = 133 bits (67), Expect = 8e-28 Identities = 144/170 (84%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| |||||||||||||||||||||||| Sbjct: 92 accggaaagactatcaccctcgaggtggaaagctctgacaccatcgacaacgtcaaggcc 151 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||| ||||||||||| ||||| || |||||||| ||| | || || ||||||||| Sbjct: 152 aagatccaagacaaggagggtattcctccggaccagcagaggttgatcttcgctggaaag 211 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||||| ||||| |||| | ||||| |||||||| ||||| ||||| Sbjct: 212 cagttggaggatggcagaactcttgctgactacaacatccagaaggagtc 261 Score = 67.9 bits (34), Expect = 4e-08 Identities = 150/189 (79%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 |||||||| || || || || |||||| ||||||||| |||||||| ||||| |||||| Sbjct: 554 aagaccattactcttgaagttgagagctccgacaccattgacaacgtgaaggctaagatc 613 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 ||||||||||| || || || || |||||||| | || || || |||||||| ||| | Sbjct: 614 caggacaaggaaggtatccctccggaccagcagcgtctcatcttcgctggaaaacagctt 673 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggtc 228 || ||||| || || || || || |||||||| ||||| ||||| || || || ||||| Sbjct: 674 gaggatggtcgtactttggccgactacaacatccagaaggagtctacccttcacttggtg 733 Query: 229 ctgaggctc 237 || |||||| Sbjct: 734 ctaaggctc 742 Score = 67.9 bits (34), Expect = 4e-08 Identities = 109/134 (81%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| |||||||| ||||| ||||||||||||||||| ||||| || || || |||||| Sbjct: 356 gacactatcgacaatgtcaaagccaagatccaggacaaagagggtatcccaccggaccag 415 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || || | || || || ||||| || | |||||||| |||| || ||||| |||||| Sbjct: 416 cagagattgatcttcgccggaaaacaacttgaagatggtagaactttggctgactacaac 475 Query: 199 attcagaaagagtc 212 |||||||| ||||| Sbjct: 476 attcagaaggagtc 489
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 133 bits (67), Expect = 8e-28 Identities = 171/206 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||||||||||||||||||||| ||||||||| | ||||| ||||||||||| ||| Sbjct: 64912 ctgaccggcaagaccatcacgcttgaggtcgagtcctcggacacgatcgacaacgtgaag 64971 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||| || ||||| |||||||| | || || || || || Sbjct: 64972 gccaagatccaggacaaggagggtatccccccggaccagcagcgcctcatcttcgccggc 65031 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||| ||||| || || || ||||| |||||||| ||||| ||||| || || Sbjct: 65032 aagcagctggaggatggccgcaccttggctgactacaacatccagaaggagtccaccctt 65091 Query: 220 catttggtcctgaggctcaggggtgg 245 || |||| || |||||||||||||| Sbjct: 65092 cacctggttctcaggctcaggggtgg 65117 Score = 123 bits (62), Expect = 8e-25 Identities = 91/101 (90%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||||||| | ||||| ||||||||||| ||| Sbjct: 64456 ctgaccggcaagaccatcaccctcgaggtcgagtcctcggacacgatcgacaacgtgaag 64515 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagca 140 |||||||||||||||||||||||||| ||||| |||||||| Sbjct: 64516 gccaagatccaggacaaggagggcatccccccggaccagca 64556 Score = 113 bits (57), Expect = 7e-22 Identities = 164/200 (82%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||||||||| |||||||| ||| | |||||||| ||||| ||||||||| Sbjct: 63775 accggcaagaccatcaccctcgaggttgagtcctcggacaccattgacaatgtcaaggcc 63834 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||||||||||||||| ||||| |||||||| | || || |||||||| ||| Sbjct: 63835 aagatccaggacaaggagggcatccccccggaccagcagcgtctcatctttgctggcaag 63894 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || | || || |||||||| ||||| ||||| || ||||| Sbjct: 63895 cagcttgaggatggccgcaccctggccgactacaacatccagaaggagtccaccctccac 63954 Query: 223 ttggtcctgaggctcagggg 242 | || || ||||||||||| Sbjct: 63955 cttgtgctcaggctcagggg 63974 Score = 109 bits (55), Expect = 1e-20 Identities = 165/202 (81%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||| |||||||||||||| || ||||||||| |||||||| ||||| ||||||| Sbjct: 64229 tgactggcaagaccatcacccttgaggtcgagtcgtctgacaccattgacaatgtcaagg 64288 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||||||||| |||||||||||||| | || || || || || | Sbjct: 64289 ccaagatccaggacaaggagggcatccccccagaccagcagcgtctcatcttcgccggca 64348 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| |||| ||||| || || | ||||| |||||||| ||||| ||||| || |||| Sbjct: 64349 agcagctggaggatggccgcacccttgctgactacaacatccagaaggagtccaccctcc 64408 Query: 221 atttggtcctgaggctcagggg 242 | | || || ||||||||||| Sbjct: 64409 accttgtgctcaggctcagggg 64430 Score = 101 bits (51), Expect = 3e-18 Identities = 167/206 (81%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||||||| | ||||| |||||||| || ||| Sbjct: 64684 ctgactggcaagaccatcacacttgaggtcgagtcctcggacacgatcgacaatgtgaag 64743 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||||||||| ||||| |||||||| | || || || ||||| Sbjct: 64744 gccaagatccaggacaaggagggcatccccccggaccagcagcgtctcatcttcgctggc 64803 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||| || || || || | || || |||||||| ||||| ||||| || ||| Sbjct: 64804 aagcagctggaggacggccgcacccttgccgactacaacatccagaaggagtccaccctc 64863 Query: 220 catttggtcctgaggctcaggggtgg 245 || | || || |||||||||||||| Sbjct: 64864 caccttgtgctcaggctcaggggtgg 64889 Score = 97.6 bits (49), Expect = 4e-17 Identities = 87/100 (87%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||| |||||||||||||| || ||||||||| |||||||| ||||| ||||||| Sbjct: 64001 tgactggcaagaccatcacccttgaggtcgagtcgtctgacaccattgacaatgtcaagg 64060 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagca 140 ||||||||||||||||||||||||| ||||| |||||||| Sbjct: 64061 ccaagatccaggacaaggagggcatccccccggaccagca 64100 Score = 87.7 bits (44), Expect = 4e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 78 cgacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagacca 137 |||||| || |||||||| ||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 65178 cgacactattgacaacgtgaaggcgaagatccaggacaaggagggcatccccccggacca 65237 Query: 138 gcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaa 197 ||| | || || |||||||| |||||| | || ||||| || || | || |||||||| Sbjct: 65238 gcagcgtctgatctttgctggtaagcagcttgaggatggccgcacccttgcggattacaa 65297 Query: 198 cattcagaaagagtcgacgctcca 221 ||| ||||| ||||| || ||||| Sbjct: 65298 catccagaaggagtccacactcca 65321
>dbj|AK121590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037P03, full insert sequence Length = 1983 Score = 133 bits (67), Expect = 8e-28 Identities = 171/206 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||||||||||||||||||||| ||||||||| | ||||| ||||||||||| ||| Sbjct: 1233 ctgaccggcaagaccatcacgcttgaggtcgagtcctcggacacgatcgacaacgtgaag 1292 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||||||||||||||||||||| || ||||| |||||||| | || || || || || Sbjct: 1293 gccaagatccaggacaaggagggtatccccccggaccagcagcgcctcatcttcgccggc 1352 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||| ||||| || || || ||||| |||||||| ||||| ||||| || || Sbjct: 1353 aagcagctggaggatggccgcaccttggctgactacaacatccagaaggagtccaccctt 1412 Query: 220 catttggtcctgaggctcaggggtgg 245 || |||| || |||||||||||||| Sbjct: 1413 cacctggttctcaggctcaggggtgg 1438 Score = 123 bits (62), Expect = 8e-25 Identities = 91/101 (90%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||||||| | ||||| ||||||||||| ||| Sbjct: 777 ctgaccggcaagaccatcaccctcgaggtcgagtcctcggacacgatcgacaacgtgaag 836 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagca 140 |||||||||||||||||||||||||| ||||| |||||||| Sbjct: 837 gccaagatccaggacaaggagggcatccccccggaccagca 877 Score = 113 bits (57), Expect = 7e-22 Identities = 164/200 (82%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||||||||| |||||||| ||| | |||||||| ||||| ||||||||| Sbjct: 96 accggcaagaccatcaccctcgaggttgagtcctcggacaccattgacaatgtcaaggcc 155 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||||||||||||||| ||||| |||||||| | || || |||||||| ||| Sbjct: 156 aagatccaggacaaggagggcatccccccggaccagcagcgtctcatctttgctggcaag 215 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || | || || |||||||| ||||| ||||| || ||||| Sbjct: 216 cagcttgaggatggccgcaccctggccgactacaacatccagaaggagtccaccctccac 275 Query: 223 ttggtcctgaggctcagggg 242 | || || ||||||||||| Sbjct: 276 cttgtgctcaggctcagggg 295 Score = 109 bits (55), Expect = 1e-20 Identities = 165/202 (81%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||| |||||||||||||| || ||||||||| |||||||| ||||| ||||||| Sbjct: 550 tgactggcaagaccatcacccttgaggtcgagtcgtctgacaccattgacaatgtcaagg 609 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 ||||||||||||||||||||||||| |||||||||||||| | || || || || || | Sbjct: 610 ccaagatccaggacaaggagggcatccccccagaccagcagcgtctcatcttcgccggca 669 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcc 220 ||||| |||| ||||| || || | ||||| |||||||| ||||| ||||| || |||| Sbjct: 670 agcagctggaggatggccgcacccttgctgactacaacatccagaaggagtccaccctcc 729 Query: 221 atttggtcctgaggctcagggg 242 | | || || ||||||||||| Sbjct: 730 accttgtgctcaggctcagggg 751 Score = 99.6 bits (50), Expect = 1e-17 Identities = 88/101 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||||||| | ||||| |||||||| || ||| Sbjct: 1005 ctgactggcaagaccatcacacttgaggtcgagtcctcggacacgatcgacaatgtgaag 1064 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagca 140 |||||||||||||||||||||||||| ||||| |||||||| Sbjct: 1065 gccaagatccaggacaaggagggcatccccccggaccagca 1105 Score = 97.6 bits (49), Expect = 4e-17 Identities = 87/100 (87%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 |||| |||||||||||||| || ||||||||| |||||||| ||||| ||||||| Sbjct: 322 tgactggcaagaccatcacccttgaggtcgagtcgtctgacaccattgacaatgtcaagg 381 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagca 140 ||||||||||||||||||||||||| ||||| |||||||| Sbjct: 382 ccaagatccaggacaaggagggcatccccccggaccagca 421 Score = 87.7 bits (44), Expect = 4e-14 Identities = 119/144 (82%) Strand = Plus / Plus Query: 78 cgacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagacca 137 |||||| || |||||||| ||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 1499 cgacactattgacaacgtgaaggcgaagatccaggacaaggagggcatccccccggacca 1558 Query: 138 gcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaa 197 ||| | || || |||||||| |||||| | || ||||| || || | || |||||||| Sbjct: 1559 gcagcgtctgatctttgctggtaagcagcttgaggatggccgcacccttgcggattacaa 1618 Query: 198 cattcagaaagagtcgacgctcca 221 ||| ||||| ||||| || ||||| Sbjct: 1619 catccagaaggagtccacactcca 1642
>emb|X60390.1|CGPOLYUGE C.griseus gene for polyubiquitin Length = 1603 Score = 133 bits (67), Expect = 8e-28 Identities = 171/206 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| || |||||| Sbjct: 654 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaatgtcaag 713 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||||||||| ||||| |||||||| | || || ||||| || Sbjct: 714 gccaagatccaggataaggagggcatcccccccgaccagcagcgactcatctttgccggc 773 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||||||||| || || | ||||||||||||| ||||||||||| || || Sbjct: 774 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtccaccctg 833 Query: 220 catttggtcctgaggctcaggggtgg 245 || ||||||| | ||||||||||| Sbjct: 834 cacctggtcctccgcctcaggggtgg 859 Score = 125 bits (63), Expect = 2e-25 Identities = 170/206 (82%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| || || ||||||||||| || |||||| Sbjct: 882 ctgaccggcaagaccatcaccctagaggtggaacccagtgacaccatcgagaatgtcaag 941 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||||||||| ||||| |||||||| | || || ||||| || Sbjct: 942 gccaagatccaggataaggagggcatcccccccgaccagcagcgactcatctttgccggc 1001 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||||||||| || || | ||||||||||||| ||||||||||| || || Sbjct: 1002 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtccaccctg 1061 Query: 220 catttggtcctgaggctcaggggtgg 245 || ||||||| | ||||||||||| Sbjct: 1062 cacctggtcctccgcctcaggggtgg 1087 Score = 125 bits (63), Expect = 2e-25 Identities = 170/206 (82%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| || || ||||||||||| || |||||| Sbjct: 426 ctgaccggcaagaccatcaccctagaggtggaacccagtgacaccatcgagaatgtcaag 485 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| ||||||||||| ||||| |||||||| | || || ||||| || Sbjct: 486 gccaagatccaggataaggagggcatcccccccgaccagcagcgactcatctttgccggc 545 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||||||||| || || | ||||||||||||| ||||||||||| || || Sbjct: 546 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtccaccctg 605 Query: 220 catttggtcctgaggctcaggggtgg 245 || ||||||| | ||||||||||| Sbjct: 606 cacctggtcctccgcctcaggggtgg 631 Score = 125 bits (63), Expect = 2e-25 Identities = 170/206 (82%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| || |||||| Sbjct: 198 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgaaaatgtcaag 257 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| | || || ||||| || Sbjct: 258 gccaagatccaggataaagagggcatcccccccgaccagcagcgactcatctttgccggc 317 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||||||||| || || | ||||||||||||| ||||||||||| || || Sbjct: 318 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtccaccctg 377 Query: 220 catttggtcctgaggctcaggggtgg 245 || ||||||| | ||||||||||| Sbjct: 378 cacctggtcctccgcctcaggggtgg 403 Score = 109 bits (55), Expect = 1e-20 Identities = 168/206 (81%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || ||||||||||| || || ||| Sbjct: 1110 ctgactggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaatgtgaag 1169 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| | || || ||||| || Sbjct: 1170 gccaagatccaggataaagagggcatcccccccgaccagcagcgactcatctttgccggc 1229 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||||||||| || || | ||||||||||||| ||||||||||| || || Sbjct: 1230 aagcagctggaagatggccgcactctttctgattacaacatccagaaagagtccaccctg 1289 Query: 220 catttggtcctgaggctcaggggtgg 245 || ||||||| | ||||||||||| Sbjct: 1290 cacctggtcctccgcctcaggggtgg 1315
>dbj|D63782.1|CRUPUQ Cricetulus sp. gene for polyubiquitin, complete cds Length = 8730 Score = 133 bits (67), Expect = 8e-28 Identities = 171/206 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||||||| || ||||||||||| || |||||| Sbjct: 7219 ctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcgagaatgtcaag 7278 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || ||||||||||||||||||||||| ||||| |||||||| ||| | || ||||| || Sbjct: 7279 gcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatctttgccggc 7338 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 |||||| |||||||||| || || | | || |||||||| ||||| ||||| || || Sbjct: 7339 aagcagctggaagatggccgcaccctgtccgactacaacatccagaaggagtccaccctg 7398 Query: 220 catttggtcctgaggctcaggggtgg 245 || ||||||| |||||||||||||| Sbjct: 7399 cacctggtcctcaggctcaggggtgg 7424 Score = 131 bits (66), Expect = 3e-27 Identities = 119/137 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||||||| || ||||||||||| || |||||| Sbjct: 6079 ctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcgagaatgtcaag 6138 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || ||||||||||||||||||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 6139 gcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatctttgccggc 6198 Query: 160 aagcagttggaagatgg 176 |||||| |||||||||| Sbjct: 6199 aagcagctggaagatgg 6215 Score = 123 bits (62), Expect = 8e-25 Identities = 118/137 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||||||| || ||||||||||| || |||||| Sbjct: 7447 ctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcgagaatgtcaag 7506 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || ||||||||||||||||||||||| ||||| |||||||| ||| | || ||||| || Sbjct: 7507 gcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatctttgccggc 7566 Query: 160 aagcagttggaagatgg 176 |||||| |||||||||| Sbjct: 7567 aagcagctggaagatgg 7583 Score = 123 bits (62), Expect = 8e-25 Identities = 118/137 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||||||| || ||||||||||| || |||||| Sbjct: 6991 ctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcgagaatgtcaag 7050 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || ||||||||||||||||||||||| ||||| |||||||| ||| | || ||||| || Sbjct: 7051 gcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatctttgccggc 7110 Query: 160 aagcagttggaagatgg 176 |||||| |||||||||| Sbjct: 7111 aagcagctggaagatgg 7127 Score = 123 bits (62), Expect = 8e-25 Identities = 118/137 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||||||| || ||||||||||| || |||||| Sbjct: 6535 ctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatcgagaatgtcaag 6594 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || ||||||||||||||||||||||| ||||| |||||||| ||| | || ||||| || Sbjct: 6595 gcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatctttgccggc 6654 Query: 160 aagcagttggaagatgg 176 |||||| |||||||||| Sbjct: 6655 aagcagctggaagatgg 6671 Score = 115 bits (58), Expect = 2e-22 Identities = 117/137 (85%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| |||||||||||||| || ||||| ||| || ||||||||||| || |||||| Sbjct: 6763 ctgacaggcaagaccatcaccctggaggttgagcccagtgacaccatcgagaatgtcaag 6822 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || ||||||||||||||||||||||| ||||| |||||||| ||| | || ||||| || Sbjct: 6823 gcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatctttgccggc 6882 Query: 160 aagcagttggaagatgg 176 |||||| |||||||||| Sbjct: 6883 aagcagctggaagatgg 6899 Score = 107 bits (54), Expect = 5e-20 Identities = 116/137 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| ||||||||||| || || ||||||||| || ||||||||||| || |||||| Sbjct: 7675 ctgacaggcaagaccataaccctggaggtcgagcccagtgacaccatcgagaatgtcaag 7734 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || ||||||||||||||| ||||||| ||||| |||||||| ||| | || ||||| || Sbjct: 7735 gcaaagatccaggacaagcagggcatcccccctgaccagcagaggttgatctttgccggc 7794 Query: 160 aagcagttggaagatgg 176 |||||| |||||||||| Sbjct: 7795 aagcagctggaagatgg 7811 Score = 107 bits (54), Expect = 5e-20 Identities = 107/125 (85%) Strand = Plus / Plus Query: 52 accatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatccag 111 |||||||| || ||||||||| || ||||||||||| || |||||||| ||||||||| Sbjct: 6319 accatcaccctggaggtcgagcccagtgacaccatcgagaatgtcaaggcaaagatccag 6378 Query: 112 gacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttggaa 171 |||||||||||||| ||||| |||||||| ||| | || ||||| || |||||| ||||| Sbjct: 6379 gacaaggagggcatcccccctgaccagcagaggttgatctttgccggcaagcagctggaa 6438 Query: 172 gatgg 176 ||||| Sbjct: 6439 gatgg 6443
>gb|AY098526.1| Ananas comosus tetrameric ubiquitin mRNA, complete cds Length = 1199 Score = 133 bits (67), Expect = 8e-28 Identities = 153/182 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||||||| | ||||||||||||||| |||||| Sbjct: 288 ctgaccggcaagaccatcaccctcgaggtcgagtcctccgacaccatcgacaatgtcaag 347 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||| ||||||||||||||||| || ||||| |||||||| | || || || || || Sbjct: 348 gccaaaatccaggacaaggaggggatccccccggaccagcagcgtctgatcttcgcaggc 407 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 ||||||||||| || || || || | || || |||||||| ||||| |||||||||||| Sbjct: 408 aagcagttggaggacggccgcactcttgcggactacaacatccagaaggagtcgacgctc 467 Query: 220 ca 221 || Sbjct: 468 ca 469 Score = 127 bits (64), Expect = 5e-26 Identities = 114/131 (87%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||||||| | |||||| |||||||||||||| Sbjct: 744 ctgaccggcaagaccatcaccctcgaggtcgagtcctccgacacgatcgacaacgtcaaa 803 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 || ||||||||||||||||||||||| || || |||||||| |||| || ||||| || Sbjct: 804 gctaagatccaggacaaggagggcatcccgccggaccagcagcggctcatctttgccggt 863 Query: 160 aagcagttgga 170 ||||||||||| Sbjct: 864 aagcagttgga 874 Score = 125 bits (63), Expect = 2e-25 Identities = 152/182 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||||||| ||||||||||||||| |||||| Sbjct: 60 ctgaccggcaagaccatcaccctcgaggtcgagtcgtccgacaccatcgacaatgtcaag 119 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||| ||||||||||||||||| || ||||| |||||||| || | || || || || Sbjct: 120 gccaaaatccaggacaaggaggggatccccccggaccagcagcggttgatcttcgccggc 179 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 ||||||||||| || || || || | || || |||||||| ||||| |||||||||||| Sbjct: 180 aagcagttggaggacggccgcactctcgcggactacaacatccagaaggagtcgacgctc 239 Query: 220 ca 221 || Sbjct: 240 ca 241 Score = 117 bits (59), Expect = 5e-23 Identities = 151/182 (82%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| |||||||||||| | ||||||||||||||| || ||| Sbjct: 516 ctgaccggcaagaccatcaccctcgaggtcgagtcctccgacaccatcgacaatgttaag 575 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 ||||| ||||||||||||||||| || || || |||||||| | || || || || || Sbjct: 576 gccaaaatccaggacaaggagggtatcccgccggaccagcagcgtctgatcttcgcaggc 635 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctc 219 ||||||||||| || || || || | || || |||||||| ||||| |||||||||||| Sbjct: 636 aagcagttggaggacggccgcactctggcggactacaacatccagaaggagtcgacgctc 695 Query: 220 ca 221 || Sbjct: 696 ca 697
>gb|U74358.1|MDU74358 Malus domestica ubiquitin mRNA, partial cds Length = 238 Score = 133 bits (67), Expect = 8e-28 Identities = 153/182 (84%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||||||||| || |||||||| ||| ||||||||||||||| ||||||||||| Sbjct: 38 ggcaagaccattaccctcgaggtggagtcatccgacaccatcgacaatgtcaaggccaaa 97 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||||||||| |||||||||||||| ||||| || ||||||||||||||| Sbjct: 98 atccaggacaaggagggcatccccccagaccagcagaggcttatctttgctggaaagcag 157 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttg 225 | || || || || || | || || |||||||| ||||| ||||| || ||||||||| Sbjct: 158 cttgaggacggccgtacccttgccgactacaacatccagaaggagtccactctccatttg 217 Query: 226 gt 227 || Sbjct: 218 gt 219
>gb|DQ104334.1| Morus mongolica ubiquitin monomer protein mRNA, complete cds Length = 459 Score = 133 bits (67), Expect = 8e-28 Identities = 90/98 (91%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 25 accggcaagaccatcactctcgaggtcgagagctccgacaccatcgacaacgtcaaggcc 84 Query: 103 aagatccaggacaaggagggcattcccccagaccagca 140 ||||||||||||||||| || || || || |||||||| Sbjct: 85 aagatccaggacaaggaaggaatcccgccggaccagca 122 Score = 123 bits (62), Expect = 8e-25 Identities = 154/185 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||| || || || || ||||||||| |||||| |||||||||||||||||| Sbjct: 253 accggcaagacaataaccctagaagtcgagagctccgacacgatcgacaacgtcaaggcc 312 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 ||||||||||| ||||| || ||||| || || ||||| ||||| || || || || || Sbjct: 313 aagatccaggataaggaaggaattccgccggatcagcagaggctgatcttcgccggcaaa 372 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 |||||||| ||||| ||||| |||| |||||||| || ||||| ||||| ||||||||| Sbjct: 373 cagttggaggatggccgaaccctagcggattacaatatccagaaggagtcaacgctccat 432 Query: 223 ttggt 227 |||| Sbjct: 433 ctggt 437
>gb|BT001165.1| Arabidopsis thaliana Unknown protein (At4g02890) mRNA, complete cds Length = 787 Score = 133 bits (67), Expect = 8e-28 Identities = 144/170 (84%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||| ||||| ||||| |||||||| || ||| |||||||||||||||||||||||| Sbjct: 25 accggaaagactatcaccctcgaggtggaaagctctgacaccatcgacaacgtcaaggcc 84 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||| ||||||||||| ||||| || |||||||| ||| | || || ||||||||| Sbjct: 85 aagatccaagacaaggagggtattcctccggaccagcagaggttgatcttcgctggaaag 144 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||||| ||||| |||| | ||||| |||||||| ||||| ||||| Sbjct: 145 cagttggaggatggcagaactcttgctgactacaacatccagaaggagtc 194 Score = 67.9 bits (34), Expect = 4e-08 Identities = 150/189 (79%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 |||||||| || || || || |||||| ||||||||| |||||||| ||||| |||||| Sbjct: 487 aagaccattactcttgaagttgagagctccgacaccattgacaacgtgaaggctaagatc 546 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 ||||||||||| || || || || |||||||| | || || || |||||||| ||| | Sbjct: 547 caggacaaggaaggtatccctccggaccagcagcgtctcatcttcgctggaaaacagctt 606 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttggtc 228 || ||||| || || || || || |||||||| ||||| ||||| || || || ||||| Sbjct: 607 gaggatggtcgtactttggccgactacaacatccagaaggagtctacccttcacttggtg 666 Query: 229 ctgaggctc 237 || |||||| Sbjct: 667 ctaaggctc 675 Score = 67.9 bits (34), Expect = 4e-08 Identities = 109/134 (81%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| |||||||| ||||| ||||||||||||||||| ||||| || || || |||||| Sbjct: 289 gacactatcgacaatgtcaaagccaagatccaggacaaagagggtatcccaccggaccag 348 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || || | || || || ||||| || | |||||||| |||| || ||||| |||||| Sbjct: 349 cagagattgatcttcgccggaaaacaacttgaagatggtagaactttggctgactacaac 408 Query: 199 attcagaaagagtc 212 |||||||| ||||| Sbjct: 409 attcagaaggagtc 422
>ref|NM_115119.2| Arabidopsis thaliana UBQ1 (UBIQUITIN EXTENSION PROTEIN 1); protein binding AT3G52590 (UBQ1) mRNA, complete cds Length = 670 Score = 131 bits (66), Expect = 3e-27 Identities = 143/169 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||| Sbjct: 55 tgaccggcaagaccatcactctcgaggtcgagagcagcgacaccatcgacaatgtcaagg 114 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| || || || || || || ||||| || | || || || |||| Sbjct: 115 ccaagatccaagacaaagaaggaatccctccggatcagcagagattgatcttcgccggaa 174 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaaga 209 ||||| | |||||||| || || || ||||| |||||||| |||||||| Sbjct: 175 agcagctcgaagatggccgtactttggctgactacaacatccagaaaga 223
>gb|DQ216238.1| Taeniopygia guttata clone 0058P0049B08 ubiquitin C variant 1-like mRNA, complete sequence Length = 735 Score = 131 bits (66), Expect = 3e-27 Identities = 117/134 (87%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 |||||||| || || || |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 199 gacaccattgaaaatgtgaaggccaagatccaggccaaggagggcattcccccagaccag 258 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||| | ||||||||||| |||||||| ||||||||||| || | | ||||||||| Sbjct: 259 cagaggttgatttttgctggcaagcagttagaagatgggcgcaccctgtccgattacaac 318 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 319 atccagaaagagtc 332
>gb|DQ445914.1| Gladiolus grandiflorus polyubiquitin (UBQ) gene, promoter region and partial cds Length = 2392 Score = 131 bits (66), Expect = 3e-27 Identities = 155/185 (83%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| |||||| |||||| ||||| || ||||| ||||| Sbjct: 1935 ggcaaaaccatcaccctcgaggtggagagctccgacacaatcgataatgtcaaagccaaa 1994 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||||||||||||||| ||||| || |||||||| |||||||| ||||||||||||||| Sbjct: 1995 atccaggacaaggaggggattcctccggaccagcagaggctaatctttgctggaaagcag 2054 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttg 225 | || ||||| || || | || || |||||||| ||||| ||||| || || |||||| Sbjct: 2055 cttgaggatggccgcactcttgccgactacaacatccagaaggagtctacacttcatttg 2114 Query: 226 gtcct 230 ||||| Sbjct: 2115 gtcct 2119 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| ||||| |||||||| || ||||| |||||||| ||||||||||||||| Sbjct: 2196 gacaccatcgataacgtgaaggccaaaattcaggataaggagggtattcccccagaccag 2255 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgg 176 |||||||| || |||||||| ||||||||||| ||||| Sbjct: 2256 caaaggcttatatttgctggcaagcagttggaggatgg 2293
>gb|BT012977.1| Lycopersicon esculentum clone 114188F, mRNA sequence Length = 653 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| || ||||| |||||||||||||| || |||||||| || ||||| ||||||||| Sbjct: 85 gacactattgacaatgtcaaggccaagattcaagacaaggaaggaattcctccagaccag 144 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 |||||||| ||||||||||| |||||| | |||||||| || || | ||||| || ||| Sbjct: 145 caaaggctgatttttgctggtaagcagctagaagatggccgcactcttgctgactataac 204 Query: 199 attcagaaagagtcgacgctccatttggtcctgaggct 236 ||||||||||||||||| | |||||||| |||||||| Sbjct: 205 attcagaaagagtcgactttgcatttggtgctgaggct 242
>ref|XR_001605.1| PREDICTED: Mus musculus gene model 1821, (NCBI) (Gm1821), misc RNA Length = 379 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 125 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 184 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 185 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 244 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 245 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 297 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcac 59 |||||||||||||||||||| Sbjct: 353 ctgaccggcaagaccatcac 372
>emb|CR731309.2|CNS0GR82 Tetraodon nigroviridis full-length cDNA Length = 805 Score = 131 bits (66), Expect = 3e-27 Identities = 119/137 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||| Sbjct: 479 ctgactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaag 538 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| ||||||||||| || ||||| ||||| || |||||||| Sbjct: 539 gccaagatccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggc 598 Query: 160 aagcagttggaagatgg 176 |||||| |||||||||| Sbjct: 599 aagcagctggaagatgg 615 Score = 129 bits (65), Expect = 1e-26 Identities = 148/176 (84%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 29 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 88 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 89 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 148 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 |||||||||| || || | | || |||||||| ||||||||||| || ||||| Sbjct: 149 ctggaagatggccgcaccctgtccgactacaacatccagaaagagtccactctcca 204 Score = 111 bits (56), Expect = 3e-21 Identities = 112/131 (85%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| |||||||| Sbjct: 257 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaaa 316 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 317 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 376 Query: 166 ttggaagatgg 176 | |||||||| Sbjct: 377 cttgaagatgg 387
>emb|CR726531.2|CNS0GNJD Tetraodon nigroviridis full-length cDNA Length = 870 Score = 131 bits (66), Expect = 3e-27 Identities = 119/137 (86%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 ||||| ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||| Sbjct: 540 ctgactggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaag 599 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||||||||| ||||||||||| || ||||| ||||| || |||||||| Sbjct: 600 gccaagatccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggc 659 Query: 160 aagcagttggaagatgg 176 |||||| |||||||||| Sbjct: 660 aagcagctggaagatgg 676 Score = 119 bits (60), Expect = 1e-23 Identities = 113/131 (86%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 318 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 377 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 378 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 437 Query: 166 ttggaagatgg 176 | |||||||| Sbjct: 438 cttgaagatgg 448 Score = 111 bits (56), Expect = 3e-21 Identities = 112/131 (85%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 87 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 146 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 ||||||| |||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 147 atccagggcaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 206 Query: 166 ttggaagatgg 176 | |||||||| Sbjct: 207 cttgaagatgg 217
>emb|CR656328.2|CNS0F5E6 Tetraodon nigroviridis full-length cDNA Length = 812 Score = 131 bits (66), Expect = 3e-27 Identities = 150/177 (84%), Gaps = 1/177 (0%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 29 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 88 Query: 106 atccaggacaaggagggcatt-cccccagaccagcaaaggctaatttttgctggaaagca 164 |||||||||||||| |||||| ||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 89 atccaggacaaggaaggcattcccccctgatcagcagaggctgatttttgctggcaagca 148 Query: 165 gttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 | |||||||||| || || | |||| |||||||| ||||||||||| || ||||| Sbjct: 149 gctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctcca 205 Score = 119 bits (60), Expect = 1e-23 Identities = 113/131 (86%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || ||||||||| || ||||| ||||||||| Sbjct: 487 ggcaaaaccatcaccctcgaggtggagcccagcgacaccattgagaacgtgaaggccaag 546 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 |||||||||||||| ||||||||||| || ||||| ||||| || |||||||| |||||| Sbjct: 547 atccaggacaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcag 606 Query: 166 ttggaagatgg 176 | |||||||| Sbjct: 607 ctagaagatgg 617 Score = 60.0 bits (30), Expect = 1e-05 Identities = 141/177 (79%), Gaps = 1/177 (0%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 ||||| |||||||| |||||||| ||| || |||||||| || || |||||| |||| Sbjct: 258 ggcaaaaccatcaccctcgaggtggagcccagtgacaccattgagaatgtcaagaccaaa 317 Query: 106 atccaggacaa-ggagggcattcccccagaccagcaaaggctaatttttgctggaaagca 164 ||||||||||| | |||| |||| || || ||||| ||||| || |||||||| ||||| Sbjct: 318 atccaggacaaagaagggggttcctcctgatcagcagaggctgatctttgctggcaagca 377 Query: 165 gttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctcca 221 | | |||||||| || || | | || |||||||| ||||||||||| || ||||| Sbjct: 378 gcttgaagatggccgcaccctgtccgactacaacatccagaaagagtccaccctcca 434
>gb|AY059080.1| Arabidopsis thaliana putative ubiquitin extension protein UBQ1 (At3g52590) mRNA, complete cds Length = 418 Score = 131 bits (66), Expect = 3e-27 Identities = 143/169 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||| Sbjct: 23 tgaccggcaagaccatcactctcgaggtcgagagcagcgacaccatcgacaatgtcaagg 82 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| || || || || || || ||||| || | || || || |||| Sbjct: 83 ccaagatccaagacaaagaaggaatccctccggatcagcagagattgatcttcgccggaa 142 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaaga 209 ||||| | |||||||| || || || ||||| |||||||| |||||||| Sbjct: 143 agcagctcgaagatggccgtactttggctgactacaacatccagaaaga 191
>gb|AY035148.1| Arabidopsis thaliana putative ubiquitin extension protein UBQ1 (At3g52590) mRNA, complete cds Length = 565 Score = 131 bits (66), Expect = 3e-27 Identities = 143/169 (84%) Strand = Plus / Plus Query: 41 tgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaagg 100 ||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||| Sbjct: 51 tgaccggcaagaccatcactctcgaggtcgagagcagcgacaccatcgacaatgtcaagg 110 Query: 101 ccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaa 160 |||||||||| ||||| || || || || || || ||||| || | || || || |||| Sbjct: 111 ccaagatccaagacaaagaaggaatccctccggatcagcagagattgatcttcgccggaa 170 Query: 161 agcagttggaagatgggcgaacattagctgattacaacattcagaaaga 209 ||||| | |||||||| || || || ||||| |||||||| |||||||| Sbjct: 171 agcagctcgaagatggccgtactttggctgactacaacatccagaaaga 219
>gb|DQ118117.1| Lupinus albus polyubiquitin mRNA, partial cds Length = 397 Score = 131 bits (66), Expect = 3e-27 Identities = 155/185 (83%) Strand = Plus / Plus Query: 43 accggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggcc 102 ||||||||||||||||| || ||||| |||||| || ||||| |||||||| ||||| Sbjct: 127 accggcaagaccatcacccttgaggtggagagctctgataccattgacaacgttaaggct 186 Query: 103 aagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaag 162 |||||||||||||||||||||||||| || |||||||| ||| | || ||||| |||||| Sbjct: 187 aagatccaggacaaggagggcattccaccggaccagcagaggttgatctttgcaggaaag 246 Query: 163 cagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccat 222 ||| | || ||||| || || |||| || |||||||| ||||| ||||| || |||||| Sbjct: 247 cagcttgaggatggtcgcaccctagccgactacaacatccagaaggagtccacactccat 306 Query: 223 ttggt 227 ||||| Sbjct: 307 ttggt 311
>dbj|AK160683.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3010009A18 product:Similar to polyubiquitin (Fragment) homolog [Bos taurus], full insert sequence Length = 821 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 118 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 177 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 178 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 237 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 238 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 290 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||||||||| ||||| || |||||||||||| | ||| ||||||| ||||| |||||| Sbjct: 385 gacaccatcgagaacgtgaaagccaagatccagaataagaagggcatcccccctgaccag 444 Query: 139 ca 140 || Sbjct: 445 ca 446
>gb|L81141.1| Pisum sativum (Alaska) ubiquitin (PUB3) gene, complete cds Length = 2544 Score = 131 bits (66), Expect = 3e-27 Identities = 117/134 (87%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| || ||||| || ||||||||||| |||||||||||||| || |||||||||||| Sbjct: 1768 gacactattgacaatgtgaaggccaagatacaggacaaggagggtatccccccagaccag 1827 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 |||||| | |||||||| || |||||| | |||||||| |||||||| |||||||| ||| Sbjct: 1828 caaaggttgatttttgcggggaagcagctcgaagatggccgaacattggctgattataac 1887 Query: 199 attcagaaagagtc 212 |||||||| ||||| Sbjct: 1888 attcagaaggagtc 1901 Score = 131 bits (66), Expect = 3e-27 Identities = 117/134 (87%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| || ||||| || ||||| ||||| |||||||||||||| || |||||||||||| Sbjct: 1540 gacacaattgacaatgtgaaggctaagatacaggacaaggagggtatccccccagaccag 1599 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 |||||| | |||||||||||||||||| | |||||||| |||| |||||||||||||| Sbjct: 1600 caaaggttgatttttgctggaaagcagctcgaagatggcagaactctagctgattacaac 1659 Query: 199 attcagaaagagtc 212 || ||||||||||| Sbjct: 1660 atccagaaagagtc 1673 Score = 113 bits (57), Expect = 7e-22 Identities = 137/164 (83%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| || ||||| ||||| |||||||| ||||| || ||||||||||| Sbjct: 1282 aagaccatcacccttgaggtggagagttctgacaccatagacaatgtaaaggccaagata 1341 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcagttg 168 || ||||| ||||| || || ||||| ||||||||||| || ||||||||||| ||| | Sbjct: 1342 caagacaaagagggtatcccaccagatcagcaaaggcttatctttgctggaaaacagctt 1401 Query: 169 gaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||||| ||||| | |||||||||||||| ||||||||||| Sbjct: 1402 gaagatggccgaaccctggctgattacaacatacagaaagagtc 1445 Score = 77.8 bits (39), Expect = 4e-11 Identities = 92/110 (83%) Strand = Plus / Plus Query: 49 aagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaagatc 108 ||||||||||| || ||||| |||||| || ||||| ||||| ||||| |||||||| Sbjct: 1054 aagaccatcacccttgaggtggagagctctgataccattgacaatgtcaaagccaagatt 1113 Query: 109 caggacaaggagggcattcccccagaccagcaaaggctaatttttgctgg 158 ||||| || ||||||||||| |||||||| || ||||| || |||||||| Sbjct: 1114 caggataaagagggcattccaccagaccaacagaggcttatctttgctgg 1163 Score = 69.9 bits (35), Expect = 1e-08 Identities = 145/182 (79%) Strand = Plus / Plus Query: 46 ggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaaggccaag 105 |||||||||||||| || || || ||||| || ||||| ||||| || ||||||||| Sbjct: 823 ggcaagaccatcactcttgaagttgagagttcagataccatagacaatgttaaggccaag 882 Query: 106 atccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctggaaagcag 165 || || |||||||| || || || ||||||||||| | || ||||||||||| ||||| Sbjct: 883 attcaagacaaggaagggatccctccagaccagcagcgtctcatttttgctggcaagcaa 942 Query: 166 ttggaagatgggcgaacattagctgattacaacattcagaaagagtcgacgctccatttg 225 | || |||||||| || | ||||||||||| || ||||| || || || ||||||||| Sbjct: 943 ctagaggatgggcgtacccttgctgattacaatatacagaaggaatcaactctccatttg 1002 Query: 226 gt 227 || Sbjct: 1003 gt 1004 Score = 67.9 bits (34), Expect = 4e-08 Identities = 109/134 (81%) Strand = Plus / Plus Query: 79 gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcattcccccagaccag 138 ||||| ||||| || || ||||| || || |||||||||||||| || || ||||| ||| Sbjct: 1996 gacacaatcgataatgtgaaggcaaaaatacaggacaaggagggaatcccaccagatcag 2055 Query: 139 caaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaac 198 || ||| | || |||||||| ||||| ||||| ||||| | || | |||||||||||| Sbjct: 2056 cagaggttgatctttgctgggaagcaattggaggatggtaggacccttgctgattacaac 2115 Query: 199 attcagaaagagtc 212 |||||||| ||||| Sbjct: 2116 attcagaaggagtc 2129 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 338 aggagaaagagggtattccacctgttcaacagaggctcatctatgctgg 386 |||| |||||||| |||||||| | ||||||||||| |||| |||||| Sbjct: 1115 aggataaagagggcattccaccagaccaacagaggcttatctttgctgg 1163
>dbj|AK003190.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1100001L13 product:ubiquitin B, full insert sequence Length = 932 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 349 ctgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtgaag 408 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 409 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 468 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 469 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 521 Score = 131 bits (66), Expect = 3e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| || ||||| ||| || ||||||||||| ||||| ||| Sbjct: 121 ctgaccggcaagaccatcaccctagaggtggagcccagtgacaccatcgagaacgtgaag 180 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 181 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 240 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtc 212 |||||| |||||||||| || || | ||||||||||||| ||||| ||||| Sbjct: 241 aagcagctggaagatggccgcaccctctctgattacaacatccagaaggagtc 293 Score = 121 bits (61), Expect = 3e-24 Identities = 147/176 (83%) Strand = Plus / Plus Query: 40 ctgaccggcaagaccatcacgctcgaggtcgagagcancgacaccatcgacaacgtcaag 99 |||||||||||||||||||| | ||||| ||| || ||||||||||| || || ||| Sbjct: 577 ctgaccggcaagaccatcaccttggaggtggagcccagtgacaccatcgagaatgtgaag 636 Query: 100 gccaagatccaggacaaggagggcattcccccagaccagcaaaggctaatttttgctgga 159 |||||||||||||| || |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 637 gccaagatccaggataaagagggcatcccccctgaccagcagaggctgatctttgccggc 696 Query: 160 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtcgac 215 |||||| | |||||||| || || | ||||||||||||| |||||||||||||| Sbjct: 697 aagcagctagaagatggccgcactctctctgattacaacatccagaaagagtcgac 752 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,724,918 Number of Sequences: 3902068 Number of extensions: 5724918 Number of successful extensions: 100108 Number of sequences better than 10.0: 2426 Number of HSP's better than 10.0 without gapping: 2400 Number of HSP's successfully gapped in prelim test: 31 Number of HSP's that attempted gapping in prelim test: 90372 Number of HSP's gapped (non-prelim): 8379 length of query: 651 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 628 effective length of database: 17,143,297,704 effective search space: 10765990958112 effective search space used: 10765990958112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
