No.
Definition
Score (bits)
E Value
1 ref|XM_478770.1| Oryza sativa (japonica cultivar-group), mRNA
561
e-156
2 dbj|AK100076.1| Oryza sativa (japonica cultivar-group) cDNA clon...
561
e-156
3 ref|XM_478769.1| Oryza sativa (japonica cultivar-group), mRNA
539
e-150
4 gb|AY107748.1| Zea mays PCO123054 mRNA sequence
161
4e-36
5 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
111
3e-21
6 dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic D...
111
3e-21
7 dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic D...
98
4e-17
8 dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
48
0.036
9 gb|AC183322.1| Ornithorhynchus anatinus BAC clone OABb-167O13 fr...
46
0.14
10 emb|BX901896.7| Zebrafish DNA sequence from clone DKEY-71L1 in l...
46
0.14
11 gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, co...
44
0.57
12 gb|AC124989.7| Mus musculus chromosome 1, clone RP24-404O8, comp...
44
0.57
13 ref|XM_518447.1| PREDICTED: Pan troglodytes similar to dynein, a...
42
2.2
14 gb|AY728226.1| Aneides hardii mitochondrion, complete genome
42
2.2
15 gb|AF356519.1| Homo sapiens axonemal dynein heavy chain 8 (DNAH8...
42
2.2
16 emb|AL031727.43|HS1056L3 Human DNA sequence from clone RP5-1056L...
42
2.2
17 ref|NM_001371.1| Homo sapiens dynein, axonemal, heavy polypeptid...
42
2.2
18 dbj|AK093434.1| Homo sapiens cDNA FLJ36115 fis, clone TESTI20222...
42
2.2
19 dbj|AK093653.1| Homo sapiens cDNA FLJ36334 fis, clone THYMU20062...
42
2.2
20 gb|AF391366.1| Hypseleotris compressa cytochrome c oxidase subun...
42
2.2
21 gb|AY722164.1| Bostrychus sinensis cytochrome oxidase subunit I ...
42
2.2
22 dbj|AP003160.1| Homo sapiens genomic DNA, chromosome 1p36 clone:...
42
2.2
23 ref|NM_115607.2| Arabidopsis thaliana metalloendopeptidase AT3G5...
40
8.8
24 gb|AC166248.20| Mus musculus BAC RP23-311A8 (Roswell Park Cance...
40
8.8
25 gb|AC154908.4| Mus musculus BAC clone RP23-315C11 from chromosom...
40
8.8
26 gb|AY728231.1| Hemidactylium scutatum mitochondrion, complete ge...
40
8.8
27 gb|AY693358.1| Saccharomyces cerevisiae clone FLH115332.01X YBL1...
40
8.8
28 gb|AY692969.1| Saccharomyces cerevisiae clone FLH000839.01X YBL0...
40
8.8
29 gb|AC132391.3| Mus musculus BAC clone RP23-454N21 from chromosom...
40
8.8
30 gb|AC011325.17| Homo sapiens 3 BAC RP11-17P4 (Roswell Park Cance...
40
8.8
31 gb|AC129313.4| Mus musculus BAC clone RP23-342K4 from chromosome...
40
8.8
32 gb|CP000001.1| Bacillus cereus E33L, complete genome
40
8.8
33 emb|AL606753.12| Human DNA sequence from clone RP11-2P2 on chrom...
40
8.8
34 emb|Z35861.1|SCYBL100C S.cerevisiae chromosome II reading frame ...
40
8.8
35 emb|X79489.1|SCDNCH2 S.cerevisiae genomic DNA, chromosome II fro...
40
8.8
36 emb|X61010.1|MICCCG Cyprinus carpio complete mitochondrial genome
40
8.8
37 gb|AY035059.1| Arabidopsis thaliana At3g57470 mRNA sequence
40
8.8
38 emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
40
8.8
39 emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
40
8.8
40 gb|DQ121087.1| Hucho taimen clone ZA-81 microsatellite sequence
40
8.8
41 gb|AC079320.9| Homo sapiens chromosome 5, clone RP11-729C24, com...
40
8.8
42 gb|AC116366.2| Homo sapiens chromosome 5 clone RP11-89G4, comple...
40
8.8
43 ref|NM_135268.2| Drosophila melanogaster CG5160-RA (CG5160), mRNA
40
8.8
44 gb|AC012168.10| Homo sapiens chromosome 10 clone RP11-79I23, com...
40
8.8
45 gb|AY071187.1| Drosophila melanogaster RE23556 full length cDNA
40
8.8
46 gb|AY213603.1| Etrumeus teres cytochrome c oxidase subunit I gen...
40
8.8
47 gb|AY213599.1| Sardinella aurita cytochrome c oxidase subunit I ...
40
8.8
48 gb|AY213591.1| Alosa aestivalis cytochrome c oxidase subunit I g...
40
8.8
49 tpg|BK001702.1| TPA: TPA_exp: Drosophila melanogaster RAS-like f...
40
8.8
50 gb|AC009534.9|AC009534 Drosophila melanogaster, chromosome 2L, r...
40
8.8
51 gb|AC012354.11| Homo sapiens BAC clone RP11-89K21 from 2, comple...
40
8.8
52 gb|AC008354.3|AC008354 Drosophila melanogaster, chromosome 2L, r...
40
8.8
53 emb|BX823565.1|CNS0A4WF Arabidopsis thaliana Full-length cDNA Co...
40
8.8
54 gb|AC156804.2| Pan troglodytes BAC clone CH251-371A18 from chrom...
40
8.8
55 gb|AC154651.2| Mus musculus BAC clone RP24-261K2 from chromosome...
40
8.8
56 gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complet...
40
8.8
57 dbj|AP002978.1| Ophisurus macrorhynchos mitochondrial DNA, compl...
40
8.8
58 gb|AE003617.3| Drosophila melanogaster chromosome 2L, section 26...
40
8.8
59 gb|AF041468.1| Guillardia theta complete plastid genome
40
8.8
60 gb|AC005746.1|AC005746 Homo sapiens chromosome 17, clone hRPK.33...
40
8.8
61 gb|AC153417.1| Mus musculus BAC clone RP24-169H4 from 9, complet...
40
8.8
62 gb|AC151315.2| Xenopus tropicalis clone ISB-195F15, complete seq...
40
8.8
63 gb|AC166252.18| Mus musculus 6 BAC RP23-100G10 (Roswell Park Can...
40
8.8
64 gb|J02603.1|YSCATPAMT Yeast (S.cerevisiae) mitochondrial ATPase ...
40
8.8
65 gb|AC144795.5| Mus musculus BAC clone RP24-374I3 from chromosome...
40
8.8
66 dbj|AP002920.1| Saurida undosquamis mitochondrial DNA, complete ...
40
8.8
67 dbj|AB006953.1| Carassius auratus langsdorfi mitochondrial DNA, ...
40
8.8
68 dbj|D37949.1| Saccharomyces cerevisiae DNA for defective F1F0-AT...
40
8.8
69 dbj|D37948.1| Saccharomyces cerevisiae DNA for F1F0-ATPase alpha...
40
8.8
70 dbj|D88458.1| Saccharomyces cerevisiae DNA for defective F1F0-AT...
40
8.8
>dbj|AP008213.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 111 bits (56), Expect = 3e-21
Identities = 89/100 (89%)
Strand = Plus / Minus
Query: 520 cagaaatgggtagaaaatgctcccaacgaagatttacacctgccaaaacctaatatcttc 579
|||||||||||| | | ||||||| |||||||| ||| | ||||||||||||||||||
Sbjct: 22890358 cagaaatgggtaaatatggctcccatggaagatttgcacattccaaaacctaatatcttc 22890299
Query: 580 attccaactgacctttcattgaaaaatgttgaggaaaagg 619
||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 22890298 attccaagtgatctttcattgaaaaatgttgaggaaaagg 22890259
Score = 105 bits (53), Expect = 2e-19
Identities = 80/89 (89%)
Strand = Plus / Minus
Query: 52 tgggcaatgagtttggaagcaggggaaggggattggagttacgagttctctttcttcagt 111
||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 22911500 tgggctatgagtttggaagcaggggaaggtgattggagttatgagttttctttcttcagt 22911441
Query: 112 gtcgttatacagcttacagatgtaggcca 140
|| || ||| |||| || |||||||||||
Sbjct: 22911440 gttgtcataaagctcactgatgtaggcca 22911412
Score = 103 bits (52), Expect = 7e-19
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 244 gagacgggattccactatcgagacaagagccctcctatgaattatgttgtcaatatttcc 303
|||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 22893355 gagatgggattccactaccgagacaagagtcctcctatccattatgttgtcaatatttcc 22893296
Query: 304 tcaaacatgcag 315
||||||||||||
Sbjct: 22893295 tcaaacatgcag 22893284
Score = 101 bits (51), Expect = 3e-18
Identities = 78/87 (89%)
Strand = Plus / Minus
Query: 142 gagcacatggaggatgttgttgggttgctgttcagatacattacattgcttcagacctct 201
||||||||||||||| ||||||| || ||||||||||||| ||||| ||||||||||||
Sbjct: 22911324 gagcacatggaggatattgttggactgttgttcagatacataacattacttcagacctct 22911265
Query: 202 ggaactccaaagtggatttttgatgag 228
|| |||| ||||||||||||||||||
Sbjct: 22911264 ggcactctgaagtggatttttgatgag 22911238
Score = 99.6 bits (50), Expect = 1e-17
Identities = 80/90 (88%)
Strand = Plus / Minus
Query: 518 tgcagaaatgggtagaaaatgctcccaacgaagatttacacctgccaaaacctaatatct 577
|||||||||||||||| || |||||| |||||||| ||| ||||||||||||||||||
Sbjct: 22907987 tgcagaaatgggtagagaaagctcccgtggaagatttgcacatgccaaaacctaatatct 22907928
Query: 578 tcattccaactgacctttcattgaaaaatg 607
|| |||||| ||| ||||||||||||||||
Sbjct: 22907927 tccttccaagtgatctttcattgaaaaatg 22907898
Score = 97.6 bits (49), Expect = 4e-17
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 313 cagatttttccaccagaagattggcttattgcgtcgtctgtaccatcaaagttttcacca 372
||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 22927125 cagatctttccgccggaagattggctgattgcatcgtctgtgccatcaaagttttcacca 22927066
Query: 373 gatgctattcaga 385
|||||||||||||
Sbjct: 22927065 gatgctattcaga 22927053
Score = 95.6 bits (48), Expect = 2e-16
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 244 gagacgggattccactatcgagacaagagccctcctatgaattatgttgtcaatatttcc 303
||||| ||||||||||||||||||||| | |||||||| ||||||||| ||||||||||
Sbjct: 22910310 gagacaggattccactatcgagacaagggtcctcctatccattatgttgccaatatttcc 22910251
Query: 304 tcaaacatgcag 315
||||||||||||
Sbjct: 22910250 tcaaacatgcag 22910239
Score = 91.7 bits (46), Expect = 3e-15
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 421 atattctgggagtcaaaattatttgaagggcaaacagacttaactgaaccttggtatggt 480
|||||||||||||| ||| |||||||||||||||| ||||||| || || |||||||||
Sbjct: 22908170 atattctgggagtccaaaaaatttgaagggcaaacaaacttaacagagccgtggtatggt 22908111
Query: 481 acgtcatatagtgttgaagcagtgcctccttccattat 518
|| |||||| ||| |||||||| ||||| ||||||||
Sbjct: 22908110 acatcatattctgtggaagcagttcctccatccattat 22908073
Score = 91.7 bits (46), Expect = 3e-15
Identities = 91/106 (85%)
Strand = Plus / Minus
Query: 314 agatttttccaccagaagattggcttattgcgtcgtctgtaccatcaaagttttcaccag 373
|||| ||||| || ||||||||||| ||||| || ||||| |||||||||||||| ||||
Sbjct: 22891553 agatctttccgccggaagattggctgattgcatcatctgtgccatcaaagttttctccag 22891494
Query: 374 atgctattcagaaggtgctaaatgaattgactacagagaatgttag 419
||||||||||||| | ||||||| |||||| |||| ||||||||
Sbjct: 22891493 atgctattcagaatatattaaatgacttgactccagataatgttag 22891448
Score = 91.7 bits (46), Expect = 3e-15
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 418 agaatattctgggagtcaaaattatttgaagggcaaacagacttaactgaaccttggtat 477
|||||||||||||| |||||| ||||||||||||||| ||||||| || |||||||||
Sbjct: 22890546 agaatattctgggaatcaaaaaagtttgaagggcaaacaaacttaacagagccttggtat 22890487
Query: 478 ggtacgtcatatagtgttgaagcagtgcctccttccat 515
||||| |||||| ||||||||||| ||||||||||
Sbjct: 22890486 ggtacatcatattcagttgaagcagtcactccttccat 22890449
Score = 89.7 bits (45), Expect = 1e-14
Identities = 78/89 (87%)
Strand = Plus / Minus
Query: 227 agcttctatccatctgcgagacgggattccactatcgagacaagagccctcctatgaatt 286
|||||||| | ||| | ||||| ||||||||||| ||||||||||| ||||||| | |
Sbjct: 22928345 agcttctaactatccgtgagacaggattccactaccgagacaagagtcctcctagccaat 22928286
Query: 287 atgttgtcaatatttcctcaaacatgcag 315
|||||||||||||||||||||||||||||
Sbjct: 22928285 atgttgtcaatatttcctcaaacatgcag 22928257
Score = 87.7 bits (44), Expect = 4e-14
Identities = 80/92 (86%)
Strand = Plus / Minus
Query: 49 ggatgggcaatgagtttggaagcaggggaaggggattggagttacgagttctctttcttc 108
|||||||| ||||||||| |||||||||||| |||||||||| | ||| || ||||||
Sbjct: 22929384 ggatgggctatgagtttgagagcaggggaaggtgattggagttctgtgttttcgttcttc 22929325
Query: 109 agtgtcgttatacagcttacagatgtaggcca 140
||||| ||||||| ||| ||||||||||||||
Sbjct: 22929324 agtgttgttatacggctcacagatgtaggcca 22929293
Score = 83.8 bits (42), Expect = 7e-13
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 538 gctcccaacgaagatttacacctgccaaaacctaatatcttcattccaactgacctttca 597
||||||| |||||||| ||| | ||||||||||| ||||||||||||| ||| ||||||
Sbjct: 22926097 gctcccatggaagatttgcacataccaaaacctaacatcttcattccaagtgatctttca 22926038
Query: 598 ttgaaaaatgttgaggaaaagg 619
||||| ||||||||||| ||||
Sbjct: 22926037 ttgaagaatgttgaggagaagg 22926016
Score = 83.8 bits (42), Expect = 7e-13
Identities = 78/90 (86%)
Strand = Plus / Minus
Query: 49 ggatgggcaatgagtttggaagcaggggaaggggattggagttacgagttctctttcttc 108
|||||||| ||||||||| | ||| ||||||| || |||||||| ||||| || ||||||
Sbjct: 22894490 ggatgggctatgagtttgtatgcatgggaaggtgactggagttatgagttttcattcttc 22894431
Query: 109 agtgtcgttatacagcttacagatgtaggc 138
| ||| ||||||||||| ||||||||||||
Sbjct: 22894430 aatgttgttatacagctcacagatgtaggc 22894401
Score = 75.8 bits (38), Expect = 2e-10
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 418 agaatattctgggagtcaaaattatttgaagggcaaacagacttaactgaaccttggtat 477
||||||||||||||||||||| ||||||||||| || ||||||| || || ||||||
Sbjct: 22926307 agaatattctgggagtcaaaaaagtttgaagggcagacgaacttaacagagccatggtat 22926248
Query: 478 ggtacgtcatatagtgttgaagcagtgcctccttccat 515
||||| || ||| ||||||||||| |||||||||||
Sbjct: 22926247 ggtacatcgtattcagttgaagcagtccctccttccat 22926210
Score = 69.9 bits (35), Expect = 1e-08
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 170 tgttcagatacattacattgcttcagacctctggaactccaaagtggatttttga 224
|||||||||| || ||| |||||||||||||||||||||| || |||||||||||
Sbjct: 22929179 tgttcagatatataacactgcttcagacctctggaactcctaaatggatttttga 22929125
Score = 65.9 bits (33), Expect = 2e-07
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 328 gaagattggcttattgcgtcgtctgtaccatcaaagttttcaccagatgctattcag 384
||||||||||| ||||| ||||| || |||||||| ||||| |||||||||||||||
Sbjct: 22909208 gaagattggctgattgcatcgtccgtgccatcaaaattttccccagatgctattcag 22909152
Score = 61.9 bits (31), Expect = 2e-06
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 142 gagcacatggaggatgttgttgggttgctgttcagatacattacattgcttcagacctct 201
|||||||||||||| || |||| || | ||| ||||||| ||||||| |||||||||
Sbjct: 22894119 gagcacatggaggacattattggactgttattccgatacatagcattgctccagacctct 22894060
Query: 202 ggaactccaaagtggatttttgatgag 228
||||||| |||||||||||||||||
Sbjct: 22894059 ggaactcgtcagtggatttttgatgag 22894033
Score = 46.1 bits (23), Expect = 0.14
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 617 aggcaagttttccttgcatgctgaggaaaac 647
|||||||||||||||| ||| ||||||||||
Sbjct: 22907816 aggcaagttttccttgtatgttgaggaaaac 22907786
>dbj|AP003981.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1019_E02
Length = 121607
Score = 111 bits (56), Expect = 3e-21
Identities = 89/100 (89%)
Strand = Plus / Minus
Query: 520 cagaaatgggtagaaaatgctcccaacgaagatttacacctgccaaaacctaatatcttc 579
|||||||||||| | | ||||||| |||||||| ||| | ||||||||||||||||||
Sbjct: 83625 cagaaatgggtaaatatggctcccatggaagatttgcacattccaaaacctaatatcttc 83566
Query: 580 attccaactgacctttcattgaaaaatgttgaggaaaagg 619
||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 83565 attccaagtgatctttcattgaaaaatgttgaggaaaagg 83526
Score = 105 bits (53), Expect = 2e-19
Identities = 80/89 (89%)
Strand = Plus / Minus
Query: 52 tgggcaatgagtttggaagcaggggaaggggattggagttacgagttctctttcttcagt 111
||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 104767 tgggctatgagtttggaagcaggggaaggtgattggagttatgagttttctttcttcagt 104708
Query: 112 gtcgttatacagcttacagatgtaggcca 140
|| || ||| |||| || |||||||||||
Sbjct: 104707 gttgtcataaagctcactgatgtaggcca 104679
Score = 103 bits (52), Expect = 7e-19
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 244 gagacgggattccactatcgagacaagagccctcctatgaattatgttgtcaatatttcc 303
|||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 86622 gagatgggattccactaccgagacaagagtcctcctatccattatgttgtcaatatttcc 86563
Query: 304 tcaaacatgcag 315
||||||||||||
Sbjct: 86562 tcaaacatgcag 86551
Score = 101 bits (51), Expect = 3e-18
Identities = 78/87 (89%)
Strand = Plus / Minus
Query: 142 gagcacatggaggatgttgttgggttgctgttcagatacattacattgcttcagacctct 201
||||||||||||||| ||||||| || ||||||||||||| ||||| ||||||||||||
Sbjct: 104591 gagcacatggaggatattgttggactgttgttcagatacataacattacttcagacctct 104532
Query: 202 ggaactccaaagtggatttttgatgag 228
|| |||| ||||||||||||||||||
Sbjct: 104531 ggcactctgaagtggatttttgatgag 104505
Score = 99.6 bits (50), Expect = 1e-17
Identities = 80/90 (88%)
Strand = Plus / Minus
Query: 518 tgcagaaatgggtagaaaatgctcccaacgaagatttacacctgccaaaacctaatatct 577
|||||||||||||||| || |||||| |||||||| ||| ||||||||||||||||||
Sbjct: 101254 tgcagaaatgggtagagaaagctcccgtggaagatttgcacatgccaaaacctaatatct 101195
Query: 578 tcattccaactgacctttcattgaaaaatg 607
|| |||||| ||| ||||||||||||||||
Sbjct: 101194 tccttccaagtgatctttcattgaaaaatg 101165
Score = 97.6 bits (49), Expect = 4e-17
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 313 cagatttttccaccagaagattggcttattgcgtcgtctgtaccatcaaagttttcacca 372
||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 120392 cagatctttccgccggaagattggctgattgcatcgtctgtgccatcaaagttttcacca 120333
Query: 373 gatgctattcaga 385
|||||||||||||
Sbjct: 120332 gatgctattcaga 120320
Score = 95.6 bits (48), Expect = 2e-16
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 244 gagacgggattccactatcgagacaagagccctcctatgaattatgttgtcaatatttcc 303
||||| ||||||||||||||||||||| | |||||||| ||||||||| ||||||||||
Sbjct: 103577 gagacaggattccactatcgagacaagggtcctcctatccattatgttgccaatatttcc 103518
Query: 304 tcaaacatgcag 315
||||||||||||
Sbjct: 103517 tcaaacatgcag 103506
Score = 91.7 bits (46), Expect = 3e-15
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 421 atattctgggagtcaaaattatttgaagggcaaacagacttaactgaaccttggtatggt 480
|||||||||||||| ||| |||||||||||||||| ||||||| || || |||||||||
Sbjct: 101437 atattctgggagtccaaaaaatttgaagggcaaacaaacttaacagagccgtggtatggt 101378
Query: 481 acgtcatatagtgttgaagcagtgcctccttccattat 518
|| |||||| ||| |||||||| ||||| ||||||||
Sbjct: 101377 acatcatattctgtggaagcagttcctccatccattat 101340
Score = 91.7 bits (46), Expect = 3e-15
Identities = 91/106 (85%)
Strand = Plus / Minus
Query: 314 agatttttccaccagaagattggcttattgcgtcgtctgtaccatcaaagttttcaccag 373
|||| ||||| || ||||||||||| ||||| || ||||| |||||||||||||| ||||
Sbjct: 84820 agatctttccgccggaagattggctgattgcatcatctgtgccatcaaagttttctccag 84761
Query: 374 atgctattcagaaggtgctaaatgaattgactacagagaatgttag 419
||||||||||||| | ||||||| |||||| |||| ||||||||
Sbjct: 84760 atgctattcagaatatattaaatgacttgactccagataatgttag 84715
Score = 91.7 bits (46), Expect = 3e-15
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 418 agaatattctgggagtcaaaattatttgaagggcaaacagacttaactgaaccttggtat 477
|||||||||||||| |||||| ||||||||||||||| ||||||| || |||||||||
Sbjct: 83813 agaatattctgggaatcaaaaaagtttgaagggcaaacaaacttaacagagccttggtat 83754
Query: 478 ggtacgtcatatagtgttgaagcagtgcctccttccat 515
||||| |||||| ||||||||||| ||||||||||
Sbjct: 83753 ggtacatcatattcagttgaagcagtcactccttccat 83716
Score = 87.7 bits (44), Expect = 4e-14
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 244 gagacgggattccactatcgagacaagagccctcctatgaattatgttgtcaatatttcc 303
||||| ||||||||||| ||||||||||| ||||||| | ||||||||||||||||||
Sbjct: 121595 gagacaggattccactaccgagacaagagtcctcctagccaatatgttgtcaatatttcc 121536
Query: 304 tcaaacatgcag 315
||||||||||||
Sbjct: 121535 tcaaacatgcag 121524
Score = 83.8 bits (42), Expect = 7e-13
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 538 gctcccaacgaagatttacacctgccaaaacctaatatcttcattccaactgacctttca 597
||||||| |||||||| ||| | ||||||||||| ||||||||||||| ||| ||||||
Sbjct: 119364 gctcccatggaagatttgcacataccaaaacctaacatcttcattccaagtgatctttca 119305
Query: 598 ttgaaaaatgttgaggaaaagg 619
||||| ||||||||||| ||||
Sbjct: 119304 ttgaagaatgttgaggagaagg 119283
Score = 83.8 bits (42), Expect = 7e-13
Identities = 78/90 (86%)
Strand = Plus / Minus
Query: 49 ggatgggcaatgagtttggaagcaggggaaggggattggagttacgagttctctttcttc 108
|||||||| ||||||||| | ||| ||||||| || |||||||| ||||| || ||||||
Sbjct: 87757 ggatgggctatgagtttgtatgcatgggaaggtgactggagttatgagttttcattcttc 87698
Query: 109 agtgtcgttatacagcttacagatgtaggc 138
| ||| ||||||||||| ||||||||||||
Sbjct: 87697 aatgttgttatacagctcacagatgtaggc 87668
Score = 75.8 bits (38), Expect = 2e-10
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 418 agaatattctgggagtcaaaattatttgaagggcaaacagacttaactgaaccttggtat 477
||||||||||||||||||||| ||||||||||| || ||||||| || || ||||||
Sbjct: 119574 agaatattctgggagtcaaaaaagtttgaagggcagacgaacttaacagagccatggtat 119515
Query: 478 ggtacgtcatatagtgttgaagcagtgcctccttccat 515
||||| || ||| ||||||||||| |||||||||||
Sbjct: 119514 ggtacatcgtattcagttgaagcagtccctccttccat 119477
Score = 65.9 bits (33), Expect = 2e-07
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 328 gaagattggcttattgcgtcgtctgtaccatcaaagttttcaccagatgctattcag 384
||||||||||| ||||| ||||| || |||||||| ||||| |||||||||||||||
Sbjct: 102475 gaagattggctgattgcatcgtccgtgccatcaaaattttccccagatgctattcag 102419
Score = 61.9 bits (31), Expect = 2e-06
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 142 gagcacatggaggatgttgttgggttgctgttcagatacattacattgcttcagacctct 201
|||||||||||||| || |||| || | ||| ||||||| ||||||| |||||||||
Sbjct: 87386 gagcacatggaggacattattggactgttattccgatacatagcattgctccagacctct 87327
Query: 202 ggaactccaaagtggatttttgatgag 228
||||||| |||||||||||||||||
Sbjct: 87326 ggaactcgtcagtggatttttgatgag 87300
Score = 46.1 bits (23), Expect = 0.14
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 617 aggcaagttttccttgcatgctgaggaaaac 647
|||||||||||||||| ||| ||||||||||
Sbjct: 101083 aggcaagttttccttgtatgttgaggaaaac 101053
>dbj|AP005908.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1121_A05
Length = 172668
Score = 97.6 bits (49), Expect = 4e-17
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 313 cagatttttccaccagaagattggcttattgcgtcgtctgtaccatcaaagttttcacca 372
||||| ||||| || ||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 2339 cagatctttccgccggaagattggctgattgcatcgtctgtgccatcaaagttttcacca 2280
Query: 373 gatgctattcaga 385
|||||||||||||
Sbjct: 2279 gatgctattcaga 2267
Score = 89.7 bits (45), Expect = 1e-14
Identities = 78/89 (87%)
Strand = Plus / Minus
Query: 227 agcttctatccatctgcgagacgggattccactatcgagacaagagccctcctatgaatt 286
|||||||| | ||| | ||||| ||||||||||| ||||||||||| ||||||| | |
Sbjct: 3559 agcttctaactatccgtgagacaggattccactaccgagacaagagtcctcctagccaat 3500
Query: 287 atgttgtcaatatttcctcaaacatgcag 315
|||||||||||||||||||||||||||||
Sbjct: 3499 atgttgtcaatatttcctcaaacatgcag 3471
Score = 87.7 bits (44), Expect = 4e-14
Identities = 80/92 (86%)
Strand = Plus / Minus
Query: 49 ggatgggcaatgagtttggaagcaggggaaggggattggagttacgagttctctttcttc 108
|||||||| ||||||||| |||||||||||| |||||||||| | ||| || ||||||
Sbjct: 4598 ggatgggctatgagtttgagagcaggggaaggtgattggagttctgtgttttcgttcttc 4539
Query: 109 agtgtcgttatacagcttacagatgtaggcca 140
||||| ||||||| ||| ||||||||||||||
Sbjct: 4538 agtgttgttatacggctcacagatgtaggcca 4507
Score = 83.8 bits (42), Expect = 7e-13
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 538 gctcccaacgaagatttacacctgccaaaacctaatatcttcattccaactgacctttca 597
||||||| |||||||| ||| | ||||||||||| ||||||||||||| ||| ||||||
Sbjct: 1311 gctcccatggaagatttgcacataccaaaacctaacatcttcattccaagtgatctttca 1252
Query: 598 ttgaaaaatgttgaggaaaagg 619
||||| ||||||||||| ||||
Sbjct: 1251 ttgaagaatgttgaggagaagg 1230
Score = 75.8 bits (38), Expect = 2e-10
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 418 agaatattctgggagtcaaaattatttgaagggcaaacagacttaactgaaccttggtat 477
||||||||||||||||||||| ||||||||||| || ||||||| || || ||||||
Sbjct: 1521 agaatattctgggagtcaaaaaagtttgaagggcagacgaacttaacagagccatggtat 1462
Query: 478 ggtacgtcatatagtgttgaagcagtgcctccttccat 515
||||| || ||| ||||||||||| |||||||||||
Sbjct: 1461 ggtacatcgtattcagttgaagcagtccctccttccat 1424
Score = 69.9 bits (35), Expect = 1e-08
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 170 tgttcagatacattacattgcttcagacctctggaactccaaagtggatttttga 224
|||||||||| || ||| |||||||||||||||||||||| || |||||||||||
Sbjct: 4393 tgttcagatatataacactgcttcagacctctggaactcctaaatggatttttga 4339
>emb|AL031727.43 |HS1056L3 Human DNA sequence from clone RP5-1056L3 on chromosome 1p35.1-36.13
Contains a novel gene, the gene for a novel protein
(LOC374960), a ribosomal protein S14 (RPS14) pseudogene,
the NBL1 gene for neuroblastoma suppression of
tumorigenicity 1, the HTR6 gene for 5-hydroxytryptamine
(serotonin) receptor 6, the 3' end of the gene for a novel
protein (LOC255104) (FLJ45636) and two CpG islands,
complete sequence
Length = 163848
Score = 42.1 bits (21), Expect = 2.2
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 94 gagttctctttcttcagtgtc 114
|||||||||||||||||||||
Sbjct: 59108 gagttctctttcttcagtgtc 59088
>dbj|D88458.1 | Saccharomyces cerevisiae DNA for defective F1F0-ATPase alpha
subunit precursor, complete cds
Length = 1777
Score = 40.1 bits (20), Expect = 8.8
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 320 ttccaccagaagattggctt 339
||||||||||||||||||||
Sbjct: 117 ttccaccagaagattggctt 136
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,954,411
Number of Sequences: 3902068
Number of extensions: 6954411
Number of successful extensions: 153800
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 153420
Number of HSP's gapped (non-prelim): 375
length of query: 647
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 624
effective length of database: 17,143,297,704
effective search space: 10697417767296
effective search space used: 10697417767296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)