No.
Definition
Score (bits)
E Value
1 CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...
209
e-100
2 CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...
179
3e-90
3 CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast...
172
4e-88
4 CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...
173
2e-87
5 CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...
173
3e-87
6 CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...
171
4e-87
7 CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...
179
9e-87
8 CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...
173
2e-85
9 CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...
169
3e-85
10 CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo...
167
2e-84
11 CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...
163
4e-76
12 CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...
162
2e-75
13 CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...
162
3e-74
14 CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...
162
3e-74
15 CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...
162
6e-74
16 CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...
162
7e-74
17 CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...
162
7e-74
18 CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...
163
1e-73
19 CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...
161
1e-73
20 CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...
157
1e-73
21 CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...
162
2e-73
22 CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...
163
3e-73
23 CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...
159
5e-73
24 CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...
159
6e-73
25 CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...
162
8e-73
26 CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...
162
1e-72
27 CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...
159
1e-72
28 CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...
160
3e-72
29 CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...
158
3e-72
30 CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...
160
4e-72
31 CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...
159
4e-72
32 CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...
160
5e-72
33 CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...
162
5e-72
34 CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...
163
1e-71
35 CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...
157
1e-71
36 CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...
158
2e-71
37 CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...
159
2e-71
38 CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...
154
2e-71
39 CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...
154
2e-71
40 CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...
162
3e-71
41 CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...
155
3e-71
42 CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...
155
7e-71
43 CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...
152
1e-70
44 CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...
157
2e-70
45 CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...
158
3e-70
46 CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...
159
6e-70
47 CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...
159
8e-70
48 CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...
163
4e-64
49 CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla...
157
2e-63
50 CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...
145
5e-63
51 CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...
143
1e-60
52 CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...
130
5e-60
53 CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...
128
4e-58
54 CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...
125
6e-58
55 CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop...
135
3e-55
56 CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...
113
3e-52
57 CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type...
125
1e-45
58 CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 membe...
159
9e-39
59 CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro...
72
5e-23
60 CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 prot...
93
6e-19
61 CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloropl...
85
2e-16
62 CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloropl...
85
2e-16
63 CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII ty...
85
2e-16
64 CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloropl...
85
2e-16
65 CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloropl...
85
2e-16
66 CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast...
65
2e-10
67 CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla...
64
4e-10
68 CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl...
54
1e-09
69 CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII typ...
62
2e-09
70 LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre...
55
5e-08
71 CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop...
53
9e-07
72 CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch...
52
1e-06
73 CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla...
50
7e-06
74 LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre...
49
1e-05
75 CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch...
49
1e-05
76 CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla...
44
5e-04
77 CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo...
31
0.019
78 FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ...
35
0.19
79 AROC_ANASP (Q8YYP9) Chorismate synthase (EC 4.2.3.5) (5-enolpyru...
33
0.55
80 CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo...
32
1.2
81 ACK2_BOVIN (O02742) Activated CDC42 kinase 2 (EC 2.7.10.2) (ACK-2)
32
1.2
82 CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo...
32
1.6
83 RNC_SYMTH (Q67PF5) Ribonuclease III (EC 3.1.26.3) (RNase III)
31
3.6
84 LAMB3_HUMAN (Q13751) Laminin beta-3 chain precursor (Laminin 5 b...
30
4.6
85 DOCK_SULAC (P27414) Probable signal recognition particle protein...
30
6.1
86 ERG7_HUMAN (P48449) Lanosterol synthase (EC 5.4.99.7) (Oxidosqua...
30
7.9
87 ERG7_MOUSE (Q8BLN5) Lanosterol synthase (EC 5.4.99.7) (Oxidosqua...
30
7.9
88 MCPH1_HUMAN (Q8NEM0) Microcephalin
30
7.9
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
(LHCII type I CAB-4) (LHCP)
Length = 265
Score = 179 bits (455), Expect(2) = 3e-90
Identities = 82/87 (94%), Positives = 86/87 (98%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPEILSKNG+KFGEAVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG
Sbjct: 110 LGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 169
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
F+EGYRVGGGPLGEGLD IYPGGAFDP
Sbjct: 170 FVEGYRVGGGPLGEGLDKIYPGGAFDP 196
Score = 172 bits (436), Expect(2) = 3e-90
Identities = 83/103 (80%), Positives = 92/103 (89%), Gaps = 3/103 (2%)
Frame = +1
Query: 79 QTTSFLGTA--PRRDDLVRSVGDFG-GRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 249
Q ++F+G A +++ +R VG+FG GRITMRRTVKSAPQSIWYG DRPKYLGPFSEQTP
Sbjct: 7 QQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTP 66
Query: 250 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 378
SYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGA
Sbjct: 67 SYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGA 109
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
(LHCII type I CAB-37) (LHCP)
Length = 265
Score = 173 bits (439), Expect(2) = 2e-87
Identities = 79/87 (90%), Positives = 84/87 (96%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPEILSKNG+ FGEAVWFKAG+QIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMG
Sbjct: 110 LGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMG 169
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
F+EGYRVGGGPLGEGLD IYPGGAFDP
Sbjct: 170 FVEGYRVGGGPLGEGLDKIYPGGAFDP 196
Score = 169 bits (428), Expect(2) = 2e-87
Identities = 82/103 (79%), Positives = 89/103 (86%), Gaps = 3/103 (2%)
Frame = +1
Query: 79 QTTSFLGTAPRR--DDLVRSVGDFGG-RITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 249
Q ++F G + ++LVR +G FGG R TMRRTVKSAPQSIWYG DRPKYLGPFSEQTP
Sbjct: 7 QQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTP 66
Query: 250 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 378
SYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGA
Sbjct: 67 SYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGA 109
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
(LHCII type I CAB-36) (LHCP)
Length = 265
Score = 173 bits (438), Expect(2) = 3e-87
Identities = 79/87 (90%), Positives = 84/87 (96%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPEILSKNG+KFGEAVWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+WA QVVLMG
Sbjct: 110 LGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMG 169
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
IEGYRVGGGPLGEGLD IYPGGAFDP
Sbjct: 170 LIEGYRVGGGPLGEGLDKIYPGGAFDP 196
Score = 169 bits (427), Expect(2) = 3e-87
Identities = 79/90 (87%), Positives = 84/90 (93%), Gaps = 1/90 (1%)
Frame = +1
Query: 112 RDDLVRSVGDF-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGW 288
+++LVR +G F GGR TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGW
Sbjct: 20 QNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGW 79
Query: 289 DTAGLSADPETFAKNRELEVIHSRWAMLGA 378
DTAGLSADPETFA+NRELEVIH RWAMLGA
Sbjct: 80 DTAGLSADPETFARNRELEVIHCRWAMLGA 109
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
chloroplast precursor (CAB) (LHCP)
Length = 264
Score = 171 bits (434), Expect(2) = 4e-87
Identities = 78/87 (89%), Positives = 84/87 (96%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GC+FPE+LSKNG++FGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA QVVLMG
Sbjct: 109 LGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMG 168
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
IEGYRVGGGPLGEGLD +YPGGAFDP
Sbjct: 169 LIEGYRVGGGPLGEGLDPLYPGGAFDP 195
Score = 170 bits (430), Expect(2) = 4e-87
Identities = 81/102 (79%), Positives = 89/102 (87%), Gaps = 2/102 (1%)
Frame = +1
Query: 79 QTTSFLGTAP--RRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 252
Q+++F G +RD+LVR VG GR +MRRTVK+ PQSIWYG DRPK+LGPFSEQTPS
Sbjct: 7 QSSAFAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPS 66
Query: 253 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 378
YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA
Sbjct: 67 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 108
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
(LHCII type II CAB-151) (LHCP)
Length = 265
Score = 179 bits (454), Expect(2) = 9e-87
Identities = 81/87 (93%), Positives = 86/87 (98%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPEILSKNG+KFGEAVWFKAG+QIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMG
Sbjct: 110 LGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMG 169
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
F+EGYRVGGGPLGEGLD IYPGGAFDP
Sbjct: 170 FVEGYRVGGGPLGEGLDPIYPGGAFDP 196
Score = 161 bits (407), Expect(2) = 9e-87
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 3/103 (2%)
Frame = +1
Query: 79 QTTSFLGTAPRR--DDLVRSVGDFGG-RITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 249
Q ++F G + ++LV +G GG R++MRRTVKSAP SIWYGPDRPKYLGPFS+Q P
Sbjct: 7 QQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIP 66
Query: 250 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 378
SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGA
Sbjct: 67 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 109
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
(LHCII type II CAB-215) (LHCP)
Length = 265
Score = 169 bits (429), Expect(2) = 3e-85
Identities = 75/87 (86%), Positives = 83/87 (95%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GC FPE+L KNG+KFGEAVWFKAG+QIF+EGGLDYLGNPNL+HAQSILAIWA QVVLMG
Sbjct: 110 LGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMG 169
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
F+EGYRVGGGPLGEGLD +YPGGAFDP
Sbjct: 170 FVEGYRVGGGPLGEGLDPLYPGGAFDP 196
Score = 166 bits (419), Expect(2) = 3e-85
Identities = 80/103 (77%), Positives = 88/103 (85%), Gaps = 3/103 (2%)
Frame = +1
Query: 79 QTTSFLGTAPRR--DDLVRSVGDFG-GRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 249
Q ++F G R ++ +R G+FG R TMRRTVKSAP+SIWYGPDRPKYLGPFSEQ P
Sbjct: 7 QQSAFTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIP 66
Query: 250 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 378
SYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGA
Sbjct: 67 SYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGA 109
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
precursor (CAB) (LHCP)
Length = 266
Score = 167 bits (423), Expect(2) = 2e-84
Identities = 76/87 (87%), Positives = 82/87 (94%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L+KNG+KFGEAVWFKAGAQIFSEGGLDY GNPNL+HAQSILAIWACQVVLMG
Sbjct: 111 LGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMG 170
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
IEGYRVGGG LGEGLD + PGGAFDP
Sbjct: 171 LIEGYRVGGGTLGEGLDPLLPGGAFDP 197
Score = 165 bits (417), Expect(2) = 2e-84
Identities = 78/103 (75%), Positives = 88/103 (85%), Gaps = 3/103 (2%)
Frame = +1
Query: 79 QTTSFLGTA---PRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 249
Q++S G P++++LV+ VG RITMRRTV+SAP+SIWYGPDRPKYLGPFSE TP
Sbjct: 8 QSSSLAGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTP 67
Query: 250 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 378
SYLTGEFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGA
Sbjct: 68 SYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGA 110
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
(LHCII type I CAB-1) (LHCP)
Length = 262
Score = 163 bits (412), Expect(2) = 4e-76
Identities = 71/87 (81%), Positives = 83/87 (95%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+LS+NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG
Sbjct: 107 LGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG 166
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYR+ GGPLGE +D +YPGG+FDP
Sbjct: 167 AVEGYRIAGGPLGEVVDPLYPGGSFDP 193
Score = 142 bits (357), Expect(2) = 4e-76
Identities = 71/87 (81%), Positives = 74/87 (85%), Gaps = 5/87 (5%)
Frame = +1
Query: 133 VGDFG-GRITMRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTA 297
VG FG GRITMR+TV +A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTA
Sbjct: 20 VGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTA 79
Query: 298 GLSADPETFAKNRELEVIHSRWAMLGA 378
GLSADPETFAKNRELEVIHSRWAMLGA
Sbjct: 80 GLSADPETFAKNRELEVIHSRWAMLGA 106
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
(LHCII type I CAB-1B) (LHCP)
Length = 265
Score = 162 bits (410), Expect(2) = 2e-75
Identities = 71/87 (81%), Positives = 83/87 (95%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWACQVVLMG
Sbjct: 110 LGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 169
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYR+ GGPLGE +D +YPGG+FDP
Sbjct: 170 AVEGYRIAGGPLGEVVDPLYPGGSFDP 196
Score = 140 bits (353), Expect(2) = 2e-75
Identities = 72/99 (72%), Positives = 77/99 (77%), Gaps = 2/99 (2%)
Frame = +1
Query: 88 SFLGTAPRRDDLVRSVGDFGGRITMRRTV-KSAPQSI-WYGPDRPKYLGPFSEQTPSYLT 261
SF G A + + GRITMR+ V KSAP S WYGPDR KYLGPFS ++PSYLT
Sbjct: 12 SFAGQAVKLSPSASEISG-NGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLT 70
Query: 262 GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 378
GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGA
Sbjct: 71 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 109
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
(LHCII type I CAB-21) (LHCP)
Length = 265
Score = 162 bits (410), Expect(2) = 3e-74
Identities = 71/87 (81%), Positives = 83/87 (95%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWACQV+LMG
Sbjct: 110 LGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMG 169
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYRV GGPLGE +D +YPGG+FDP
Sbjct: 170 AVEGYRVAGGPLGEVVDPLYPGGSFDP 196
Score = 136 bits (343), Expect(2) = 3e-74
Identities = 64/79 (81%), Positives = 69/79 (87%), Gaps = 2/79 (2%)
Frame = +1
Query: 148 GRITMRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 321
GR++MR+TV A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 31 GRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET 90
Query: 322 FAKNRELEVIHSRWAMLGA 378
FAKNRELEVIH RWAMLGA
Sbjct: 91 FAKNRELEVIHCRWAMLGA 109
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
(LHCII type I CAB-50) (LHCP)
Length = 267
Score = 162 bits (411), Expect(2) = 3e-74
Identities = 72/87 (82%), Positives = 83/87 (95%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWACQVVLMG
Sbjct: 112 LGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 171
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYRV GGPLGE +D +YPGG+FDP
Sbjct: 172 AVEGYRVAGGPLGEVVDPLYPGGSFDP 198
Score = 135 bits (341), Expect(2) = 3e-74
Identities = 64/81 (79%), Positives = 69/81 (85%), Gaps = 4/81 (4%)
Frame = +1
Query: 148 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 315
G++TMR+TV A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 31 GKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 90
Query: 316 ETFAKNRELEVIHSRWAMLGA 378
ETFAKNRELEVIH RWAMLGA
Sbjct: 91 ETFAKNRELEVIHCRWAMLGA 111
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
(LHCII type I CAB-3C) (LHCP)
Length = 267
Score = 162 bits (410), Expect(2) = 6e-74
Identities = 71/87 (81%), Positives = 83/87 (95%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWACQVVLMG
Sbjct: 112 LGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 171
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYR+ GGPLGE +D +YPGG+FDP
Sbjct: 172 AVEGYRIAGGPLGEVVDPLYPGGSFDP 198
Score = 135 bits (340), Expect(2) = 6e-74
Identities = 64/81 (79%), Positives = 68/81 (83%), Gaps = 4/81 (4%)
Frame = +1
Query: 148 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 315
GR+TMR+T A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 31 GRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 90
Query: 316 ETFAKNRELEVIHSRWAMLGA 378
ETFAKNRELEVIH RWAMLGA
Sbjct: 91 ETFAKNRELEVIHCRWAMLGA 111
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
(LHCII type I CAB-40) (LHCP)
Length = 267
Score = 162 bits (411), Expect(2) = 7e-74
Identities = 72/87 (82%), Positives = 83/87 (95%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWACQVVLMG
Sbjct: 112 LGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 171
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYRV GGPLGE +D +YPGG+FDP
Sbjct: 172 AVEGYRVAGGPLGEVVDPLYPGGSFDP 198
Score = 134 bits (338), Expect(2) = 7e-74
Identities = 63/81 (77%), Positives = 68/81 (83%), Gaps = 4/81 (4%)
Frame = +1
Query: 148 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 315
G++TMR+T A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 31 GKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 90
Query: 316 ETFAKNRELEVIHSRWAMLGA 378
ETFAKNRELEVIH RWAMLGA
Sbjct: 91 ETFAKNRELEVIHCRWAMLGA 111
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
(LHCII type I CAB-16) (LHCP)
Length = 266
Score = 162 bits (411), Expect(2) = 7e-74
Identities = 72/87 (82%), Positives = 83/87 (95%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWACQVVLMG
Sbjct: 111 LGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 170
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYRV GGPLGE +D +YPGG+FDP
Sbjct: 171 AVEGYRVAGGPLGEVVDPLYPGGSFDP 197
Score = 134 bits (338), Expect(2) = 7e-74
Identities = 63/81 (77%), Positives = 68/81 (83%), Gaps = 4/81 (4%)
Frame = +1
Query: 148 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 315
G++TMR+T A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 30 GKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 89
Query: 316 ETFAKNRELEVIHSRWAMLGA 378
ETFAKNRELEVIH RWAMLGA
Sbjct: 90 ETFAKNRELEVIHCRWAMLGA 110
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
(LHCII type I CAB-22R) (LHCP)
Length = 267
Score = 163 bits (412), Expect(2) = 1e-73
Identities = 73/87 (83%), Positives = 82/87 (94%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+ ++NGIKFGEAVWFKAGAQIFSEGGLDYLGNP+LVHAQSILAIWACQVVLMG
Sbjct: 112 LGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 171
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYRV GGPLGE +D +YPGG+FDP
Sbjct: 172 AVEGYRVAGGPLGEVIDPLYPGGSFDP 198
Score = 134 bits (336), Expect(2) = 1e-73
Identities = 67/103 (65%), Positives = 75/103 (72%), Gaps = 4/103 (3%)
Frame = +1
Query: 82 TTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAP----QSIWYGPDRPKYLGPFSEQTP 249
++SF G A + + G++TMR+TV A S WYGPDR KYLGPFS + P
Sbjct: 10 SSSFAGKAVKLSSSSSEITG-NGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAP 68
Query: 250 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 378
SYLTGEFP DYGWDTAGLSADPETFAKNRELEVIH RWAMLGA
Sbjct: 69 SYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 111
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
(LHCII type I CAB-25) (LHCP)
Length = 266
Score = 161 bits (408), Expect(2) = 1e-73
Identities = 71/87 (81%), Positives = 82/87 (94%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+ ++NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWACQVVLMG
Sbjct: 111 LGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 170
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYRV GGPLGE +D +YPGG+FDP
Sbjct: 171 AVEGYRVAGGPLGEVIDPLYPGGSFDP 197
Score = 135 bits (339), Expect(2) = 1e-73
Identities = 69/103 (66%), Positives = 76/103 (73%), Gaps = 4/103 (3%)
Frame = +1
Query: 82 TTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTP 249
++SF G A + G+ G+ TMR+TV A S WYGPDR KYLGPFS + P
Sbjct: 10 SSSFAGKAVNVPSSSQITGN--GKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAP 67
Query: 250 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 378
SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGA
Sbjct: 68 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 110
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
(Allergen Api g 3)
Length = 264
Score = 157 bits (396), Expect(2) = 1e-73
Identities = 69/87 (79%), Positives = 82/87 (94%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSIL+IWA QV+LMG
Sbjct: 109 LGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMG 168
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYRV GGPLGE +D +YPGG+FDP
Sbjct: 169 AVEGYRVAGGPLGEIVDPLYPGGSFDP 195
Score = 139 bits (351), Expect(2) = 1e-73
Identities = 65/78 (83%), Positives = 70/78 (89%), Gaps = 1/78 (1%)
Frame = +1
Query: 148 GRITMRRTVKS-APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 324
GR++MR+TVK+ S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 31 GRVSMRKTVKAPVSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF 90
Query: 325 AKNRELEVIHSRWAMLGA 378
AKNRELEVIHSRWAMLGA
Sbjct: 91 AKNRELEVIHSRWAMLGA 108
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
(LHCII type I CAB) (LHCP)
Length = 267
Score = 162 bits (409), Expect(2) = 2e-73
Identities = 70/87 (80%), Positives = 83/87 (95%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWACQV+LMG
Sbjct: 112 LGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMG 171
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYR+ GGPLGE +D +YPGG+FDP
Sbjct: 172 AVEGYRIAGGPLGEVVDPLYPGGSFDP 198
Score = 134 bits (337), Expect(2) = 2e-73
Identities = 64/82 (78%), Positives = 70/82 (85%), Gaps = 5/82 (6%)
Frame = +1
Query: 148 GRITMRRTVKSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSAD 312
GRITMR+T P+++ WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSAD
Sbjct: 31 GRITMRKTA-GKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSAD 89
Query: 313 PETFAKNRELEVIHSRWAMLGA 378
PETFAKNRELEVIH RWAMLGA
Sbjct: 90 PETFAKNRELEVIHCRWAMLGA 111
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
chloroplast precursor (CAB) (LHCP) (Fragment)
Length = 255
Score = 163 bits (413), Expect(2) = 3e-73
Identities = 73/87 (83%), Positives = 82/87 (94%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+LS+NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWACQVVLMG
Sbjct: 100 LGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 159
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYR+ GGPLGE D IYPGG+FDP
Sbjct: 160 AVEGYRIAGGPLGEVTDPIYPGGSFDP 186
Score = 132 bits (331), Expect(2) = 3e-73
Identities = 62/78 (79%), Positives = 66/78 (84%), Gaps = 2/78 (2%)
Frame = +1
Query: 151 RITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 324
+ TMR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 22 KFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF 81
Query: 325 AKNRELEVIHSRWAMLGA 378
AKNRELEVIHSRWAMLGA
Sbjct: 82 AKNRELEVIHSRWAMLGA 99
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
(LHCII type I CAB-3) (LHCP)
Length = 263
Score = 159 bits (401), Expect(2) = 5e-73
Identities = 70/87 (80%), Positives = 81/87 (93%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+LS+NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMG
Sbjct: 108 LGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMG 167
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYR+ GGPLGE D IYPGG+FDP
Sbjct: 168 AVEGYRIAGGPLGEVTDPIYPGGSFDP 194
Score = 135 bits (341), Expect(2) = 5e-73
Identities = 64/79 (81%), Positives = 69/79 (87%), Gaps = 2/79 (2%)
Frame = +1
Query: 148 GRITMRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 321
GR++MR+TV + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 29 GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 88
Query: 322 FAKNRELEVIHSRWAMLGA 378
FAKNRELEVIHSRWAMLGA
Sbjct: 89 FAKNRELEVIHSRWAMLGA 107
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
(LHCII type I CAB-E) (LHCP)
Length = 266
Score = 159 bits (403), Expect(2) = 6e-73
Identities = 71/87 (81%), Positives = 82/87 (94%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWACQVVLMG
Sbjct: 111 LGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 170
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYRV G PLGE +D +YPGG+FDP
Sbjct: 171 AVEGYRVAGEPLGEVVDPLYPGGSFDP 197
Score = 134 bits (338), Expect(2) = 6e-73
Identities = 63/81 (77%), Positives = 68/81 (83%), Gaps = 4/81 (4%)
Frame = +1
Query: 148 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 315
G++TMR+T A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 30 GKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 89
Query: 316 ETFAKNRELEVIHSRWAMLGA 378
ETFAKNRELEVIH RWAMLGA
Sbjct: 90 ETFAKNRELEVIHCRWAMLGA 110
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
(LHCII type I CAB-7) (LHCP)
Length = 267
Score = 162 bits (410), Expect(2) = 8e-73
Identities = 73/87 (83%), Positives = 82/87 (94%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWACQVVLMG
Sbjct: 112 LGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 171
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
IEGYRV GGPLGE D +YPGG+FDP
Sbjct: 172 AIEGYRVAGGPLGEVTDPLYPGGSFDP 198
Score = 131 bits (330), Expect(2) = 8e-73
Identities = 63/81 (77%), Positives = 66/81 (81%), Gaps = 4/81 (4%)
Frame = +1
Query: 148 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 315
G+ MR+TV A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 31 GKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADP 90
Query: 316 ETFAKNRELEVIHSRWAMLGA 378
ETFAKNRELEVIH RWAMLGA
Sbjct: 91 ETFAKNRELEVIHCRWAMLGA 111
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
(LHCII type I CAB-91R) (LHCP)
Length = 267
Score = 162 bits (411), Expect(2) = 1e-72
Identities = 72/87 (82%), Positives = 83/87 (95%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWACQVVLMG
Sbjct: 112 LGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 171
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYRV GGPLGE +D +YPGG+FDP
Sbjct: 172 AVEGYRVAGGPLGEVVDPLYPGGSFDP 198
Score = 130 bits (328), Expect(2) = 1e-72
Identities = 63/81 (77%), Positives = 66/81 (81%), Gaps = 4/81 (4%)
Frame = +1
Query: 148 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 315
G+ TMR+TV A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTA LSADP
Sbjct: 31 GKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADP 90
Query: 316 ETFAKNRELEVIHSRWAMLGA 378
ETFAKNRELEVIH RWAMLGA
Sbjct: 91 ETFAKNRELEVIHCRWAMLGA 111
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
(LHCII type I CAB) (LHCP)
Length = 269
Score = 159 bits (401), Expect(2) = 1e-72
Identities = 72/87 (82%), Positives = 81/87 (93%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GC+ PE+L+K+G+KFGEAVWFKAGAQIFSEGGLDYLGNP+LVHAQSILAIWACQVVLMG
Sbjct: 113 LGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 172
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYRV GGPLGE D IYPGG+FDP
Sbjct: 173 AVEGYRVAGGPLGEVTDPIYPGGSFDP 199
Score = 134 bits (337), Expect(2) = 1e-72
Identities = 65/91 (71%), Positives = 75/91 (82%), Gaps = 3/91 (3%)
Frame = +1
Query: 115 DDLVRSV-GDFGGRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYG 285
++L R V G+ R+TMRRTV + S IWYG DRPK+LGPFS +TPSYL GEF GDYG
Sbjct: 22 NELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYG 81
Query: 286 WDTAGLSADPETFAKNRELEVIHSRWAMLGA 378
WDTAGLS+DPETFA+NRELEVIH+RWAMLGA
Sbjct: 82 WDTAGLSSDPETFARNRELEVIHARWAMLGA 112
Score = 30.8 bits (68), Expect = 3.6
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 226 GPFSEQT-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 369
GP E T P Y G F D GL+ DP+TFA+ + E+ + R AM
Sbjct: 182 GPLGEVTDPIYPGGSF------DPLGLADDPDTFAELKVKEIKNGRLAM 224
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
(LHCII type I CAB-13) (LHCP)
Length = 266
Score = 160 bits (404), Expect(2) = 3e-72
Identities = 70/87 (80%), Positives = 81/87 (93%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+ ++NG+KFGEAVWFKAG+QIF EGGLDYLGNP+LVHAQSILAIWACQVVLMG
Sbjct: 111 LGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMG 170
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYRV GGPLGE +D +YPGG+FDP
Sbjct: 171 AVEGYRVAGGPLGEVIDPLYPGGSFDP 197
Score = 132 bits (331), Expect(2) = 3e-72
Identities = 67/106 (63%), Positives = 77/106 (72%), Gaps = 7/106 (6%)
Frame = +1
Query: 82 TTSFLGTA---PRRDDLVRSVGDFGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSE 240
++SF G A P ++ R+ G++TMR+TV A S WYGPDR KYLGPFS
Sbjct: 10 SSSFAGKAVNVPSSSEITRN-----GKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSG 64
Query: 241 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 378
+ PSYLTGEFPGDYGWDTAGLSADP TFAKNR+LEVIH RW MLGA
Sbjct: 65 EAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGA 110
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
chloroplast precursor (DE Chlorophyll a-b binding
protein type I F3) (CAB-F3) (LHCP)
Length = 265
Score = 158 bits (400), Expect(2) = 3e-72
Identities = 71/87 (81%), Positives = 81/87 (93%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCV PE+L+KNG+KFGEAVWFKAG+QIF+EGGLDYLGNP+LVHAQSILAIWACQV+LMG
Sbjct: 110 LGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMG 169
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYRV GGPLGE D IYPGG+FDP
Sbjct: 170 AVEGYRVAGGPLGEVEDPIYPGGSFDP 196
Score = 133 bits (335), Expect(2) = 3e-72
Identities = 65/89 (73%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
Frame = +1
Query: 115 DDLVRSVGDFGGRITMRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 291
++L R VG R+ M AP SIWYG DRP YLGPFS PSYL+GEFPGDYGWD
Sbjct: 21 NELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWD 80
Query: 292 TAGLSADPETFAKNRELEVIHSRWAMLGA 378
TAGLSADPETFAKNRELEVIHSRWAMLGA
Sbjct: 81 TAGLSADPETFAKNRELEVIHSRWAMLGA 109
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
(LHCII type II CAB-1A) (LHCP)
Length = 278
Score = 160 bits (404), Expect(2) = 4e-72
Identities = 72/87 (82%), Positives = 80/87 (91%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAGAQIFSEGGLDYLG+P L+HAQSILAIWACQV+LMG
Sbjct: 123 LGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMG 182
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
IEGYRV GGPLGE D IYPGG FDP
Sbjct: 183 AIEGYRVAGGPLGEVTDPIYPGGNFDP 209
Score = 131 bits (330), Expect(2) = 4e-72
Identities = 68/97 (70%), Positives = 74/97 (76%), Gaps = 6/97 (6%)
Frame = +1
Query: 106 PRRDDLVRSVGDFG-GRITMRRTV--KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGE 267
P+ + L+ G G R+TMR+ KS SI WYGPDR YLGPFS + PSYLTGE
Sbjct: 26 PQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGE 85
Query: 268 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 378
FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA
Sbjct: 86 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 122
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
(LHCII type I CAB-8)
Length = 268
Score = 159 bits (402), Expect(2) = 4e-72
Identities = 70/87 (80%), Positives = 82/87 (94%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+LS+NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWA QV+LMG
Sbjct: 113 LGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMG 172
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYR+ GGPLGE +D +YPGG+FDP
Sbjct: 173 AVEGYRIAGGPLGEVVDPLYPGGSFDP 199
Score = 132 bits (332), Expect(2) = 4e-72
Identities = 62/82 (75%), Positives = 69/82 (84%), Gaps = 4/82 (4%)
Frame = +1
Query: 145 GGRITMRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSAD 312
G R TMR++ + + S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSAD
Sbjct: 31 GARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSAD 90
Query: 313 PETFAKNRELEVIHSRWAMLGA 378
PETF+KNRELEVIHSRWAMLGA
Sbjct: 91 PETFSKNRELEVIHSRWAMLGA 112
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
chloroplast precursor (Chlorophyll a-b binding protein
type II 1A) (CAB) (LHCP)
Length = 278
Score = 160 bits (404), Expect(2) = 5e-72
Identities = 72/87 (82%), Positives = 80/87 (91%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAGAQIFSEGGLDYLG+P L+HAQSILAIWACQV+LMG
Sbjct: 123 LGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMG 182
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
IEGYRV GGPLGE D IYPGG FDP
Sbjct: 183 AIEGYRVAGGPLGEVTDPIYPGGNFDP 209
Score = 131 bits (329), Expect(2) = 5e-72
Identities = 68/97 (70%), Positives = 74/97 (76%), Gaps = 6/97 (6%)
Frame = +1
Query: 106 PRRDDLVRSVGDFG-GRITMRRTV--KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGE 267
P+ + L+ G G R+TMR+ KS SI WYGPDR YLGPFS + PSYLTGE
Sbjct: 26 PQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGE 85
Query: 268 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 378
FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA
Sbjct: 86 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 122
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
(LHCII type I CAB-M9) (LHCP)
Length = 265
Score = 162 bits (410), Expect(2) = 5e-72
Identities = 72/87 (82%), Positives = 82/87 (94%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG
Sbjct: 110 LGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG 169
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
IEGYRV GGPLGE +D +YPGG FDP
Sbjct: 170 AIEGYRVAGGPLGEVVDPLYPGGTFDP 196
Score = 129 bits (323), Expect(2) = 5e-72
Identities = 62/81 (76%), Positives = 65/81 (80%), Gaps = 5/81 (6%)
Frame = +1
Query: 151 RITMRRTVKSAPQ-----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 315
R+TMR+T A S WYGPDR YLGP S + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 29 RVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADP 88
Query: 316 ETFAKNRELEVIHSRWAMLGA 378
ETFAKNRELEVIHSRWAMLGA
Sbjct: 89 ETFAKNRELEVIHSRWAMLGA 109
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
chloroplast precursor (Chlorophyll a-b binding protein
type II 1B) (CAB) (LHCP)
Length = 274
Score = 163 bits (412), Expect(2) = 1e-71
Identities = 72/87 (82%), Positives = 82/87 (94%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAGAQIFSEGGLDYLGNP+LVHAQSILAIWACQV+LMG
Sbjct: 119 LGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMG 178
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYR+ GGPLGE D IYPGG+FDP
Sbjct: 179 AVEGYRIAGGPLGEVTDPIYPGGSFDP 205
Score = 127 bits (318), Expect(2) = 1e-71
Identities = 61/81 (75%), Positives = 64/81 (79%), Gaps = 5/81 (6%)
Frame = +1
Query: 151 RITMRRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 315
R+TMR+ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 38 RVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 97
Query: 316 ETFAKNRELEVIHSRWAMLGA 378
E FAKNRELEVIH RWAMLGA
Sbjct: 98 ENFAKNRELEVIHCRWAMLGA 118
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
(LHCII type I CAB-C) (LHCP)
Length = 267
Score = 157 bits (396), Expect(2) = 1e-71
Identities = 69/87 (79%), Positives = 81/87 (93%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFK G+QIFS+GGLDYLGNP+LVHAQSILAIWACQVVLMG
Sbjct: 112 LGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMG 171
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYRV G PLGE +D +YPGG+FDP
Sbjct: 172 AVEGYRVAGEPLGEVVDPLYPGGSFDP 198
Score = 133 bits (334), Expect(2) = 1e-71
Identities = 62/81 (76%), Positives = 68/81 (83%), Gaps = 4/81 (4%)
Frame = +1
Query: 148 GRITMRRTVKSAP----QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 315
G++TMR+T A S WYGP+R KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 31 GKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 90
Query: 316 ETFAKNRELEVIHSRWAMLGA 378
ETFAKNRELEVIH RWAMLGA
Sbjct: 91 ETFAKNRELEVIHCRWAMLGA 111
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
(LHCII type I CAB-2) (LHCP)
Length = 264
Score = 158 bits (400), Expect(2) = 2e-71
Identities = 70/87 (80%), Positives = 81/87 (93%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFK G+QIFSEGGL YLGNP+LVHAQSILAIWACQVVLMG
Sbjct: 109 LGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMG 168
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYRV GGPLGE +D +YPGG+FDP
Sbjct: 169 AVEGYRVAGGPLGEVVDPLYPGGSFDP 195
Score = 131 bits (329), Expect(2) = 2e-71
Identities = 61/77 (79%), Positives = 67/77 (87%), Gaps = 1/77 (1%)
Frame = +1
Query: 151 RITMRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 327
R++MR+T + S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 32 RVSMRKTAATKKVGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFA 91
Query: 328 KNRELEVIHSRWAMLGA 378
KNRELEVIH RWAMLGA
Sbjct: 92 KNRELEVIHGRWAMLGA 108
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
precursor (LHCII type I CAB-AB80) (LHCP)
Length = 269
Score = 159 bits (402), Expect(2) = 2e-71
Identities = 70/87 (80%), Positives = 82/87 (94%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+LS+NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWA QV+LMG
Sbjct: 114 LGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMG 173
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYR+ GGPLGE +D +YPGG+FDP
Sbjct: 174 AVEGYRIAGGPLGEVVDPLYPGGSFDP 200
Score = 130 bits (326), Expect(2) = 2e-71
Identities = 61/80 (76%), Positives = 68/80 (85%), Gaps = 4/80 (5%)
Frame = +1
Query: 151 RITMRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 318
R TMR++ + + S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 34 RFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 93
Query: 319 TFAKNRELEVIHSRWAMLGA 378
TF+KNRELEVIHSRWAMLGA
Sbjct: 94 TFSKNRELEVIHSRWAMLGA 113
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
(LHCII type I CAB-2) (CAB-140) (LHCP)
Length = 267
Score = 154 bits (389), Expect(2) = 2e-71
Identities = 69/88 (78%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAG+QIFS+GGLDYLGNP+LVHAQSILAIWA QV+LMG
Sbjct: 111 LGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMG 170
Query: 560 FIEGYRV-GGGPLGEGLDIIYPGGAFDP 640
+EGYRV G GPLGE D++YPGG+FDP
Sbjct: 171 AVEGYRVAGNGPLGEAEDLLYPGGSFDP 198
Score = 135 bits (339), Expect(2) = 2e-71
Identities = 64/80 (80%), Positives = 69/80 (86%), Gaps = 3/80 (3%)
Frame = +1
Query: 148 GRITMRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 318
GR+TMR+TV K S WYG DR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 31 GRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 90
Query: 319 TFAKNRELEVIHSRWAMLGA 378
TFA+NRELEVIHSRWAMLGA
Sbjct: 91 TFARNRELEVIHSRWAMLGA 110
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
precursor (LHCII type I CAB-165/180)
Length = 267
Score = 154 bits (389), Expect(2) = 2e-71
Identities = 69/88 (78%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAG+QIFS+GGLDYLGNP+LVHAQSILAIWA QV+LMG
Sbjct: 111 LGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMG 170
Query: 560 FIEGYRV-GGGPLGEGLDIIYPGGAFDP 640
+EGYRV G GPLGE D++YPGG+FDP
Sbjct: 171 AVEGYRVAGNGPLGEAEDLLYPGGSFDP 198
Score = 135 bits (339), Expect(2) = 2e-71
Identities = 64/80 (80%), Positives = 69/80 (86%), Gaps = 3/80 (3%)
Frame = +1
Query: 148 GRITMRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 318
GR+TMR+TV K S WYG DR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 31 GRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 90
Query: 319 TFAKNRELEVIHSRWAMLGA 378
TFA+NRELEVIHSRWAMLGA
Sbjct: 91 TFARNRELEVIHSRWAMLGA 110
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
(LHCII type I CAB) (LHCP)
Length = 265
Score = 162 bits (409), Expect(2) = 3e-71
Identities = 70/87 (80%), Positives = 83/87 (95%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG
Sbjct: 110 LGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMG 169
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYR+ GGPLGE +D +YPGG+FDP
Sbjct: 170 AVEGYRIAGGPLGEVVDPLYPGGSFDP 196
Score = 127 bits (318), Expect(2) = 3e-71
Identities = 61/81 (75%), Positives = 64/81 (79%), Gaps = 5/81 (6%)
Frame = +1
Query: 151 RITMRRTVKSAPQ-----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 315
R+TMR+T A S WYGPDR YLGP S + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 29 RVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADP 88
Query: 316 ETFAKNRELEVIHSRWAMLGA 378
ETFAKNRELEVIH RWAMLGA
Sbjct: 89 ETFAKNRELEVIHCRWAMLGA 109
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
(LHCII type I CAB-1) (LHCP)
Length = 266
Score = 155 bits (392), Expect(2) = 3e-71
Identities = 70/88 (79%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWA QV+LMG
Sbjct: 110 LGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMG 169
Query: 560 FIEGYRVGG-GPLGEGLDIIYPGGAFDP 640
+EGYRV G GPLGE D++YPGG+FDP
Sbjct: 170 AVEGYRVAGEGPLGEAEDLLYPGGSFDP 197
Score = 133 bits (334), Expect(2) = 3e-71
Identities = 64/79 (81%), Positives = 69/79 (87%), Gaps = 2/79 (2%)
Frame = +1
Query: 148 GRITMRRTVK-SAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 321
GR+TMR+TVK + P S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 31 GRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 90
Query: 322 FAKNRELEVIHSRWAMLGA 378
FA+NRELEVIH RWAMLGA
Sbjct: 91 FARNRELEVIHCRWAMLGA 109
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
(LHCII type I CAB-22L) (LHCP)
Length = 267
Score = 155 bits (391), Expect(2) = 7e-71
Identities = 68/87 (78%), Positives = 80/87 (91%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+ ++NG+KFGEAVW KAG+QIFSEGGLDYLGNP+LVHAQSILAIWACQV+LMG
Sbjct: 112 LGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMG 171
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYRV GGPLG +D +YPGG+FDP
Sbjct: 172 AVEGYRVAGGPLGVVVDPLYPGGSFDP 198
Score = 132 bits (332), Expect(2) = 7e-71
Identities = 63/81 (77%), Positives = 66/81 (81%), Gaps = 4/81 (4%)
Frame = +1
Query: 148 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 315
G+ TMR+T A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 31 GKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADP 90
Query: 316 ETFAKNRELEVIHSRWAMLGA 378
ETFAKNRELEVIH RWAMLGA
Sbjct: 91 ETFAKNRELEVIHCRWAMLGA 111
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
(LHCII type I CAB) (LHCP) (Fragment)
Length = 245
Score = 152 bits (384), Expect(2) = 1e-70
Identities = 67/87 (77%), Positives = 79/87 (90%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEA WFKAG+QIFSEGGLDYLGN +L+HAQSILAIWA QV+LMG
Sbjct: 90 LGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMG 149
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYR+ GGPLGE D IYPGG+FDP
Sbjct: 150 AVEGYRIAGGPLGEVTDPIYPGGSFDP 176
Score = 134 bits (338), Expect(2) = 1e-70
Identities = 63/79 (79%), Positives = 67/79 (84%), Gaps = 2/79 (2%)
Frame = +1
Query: 148 GRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 321
GR++MR+T S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 11 GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 70
Query: 322 FAKNRELEVIHSRWAMLGA 378
FAKNRELEVIHSRWAMLGA
Sbjct: 71 FAKNRELEVIHSRWAMLGA 89
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
(LHCII type I CAB) (LHCP)
Length = 266
Score = 157 bits (397), Expect(2) = 2e-70
Identities = 68/87 (78%), Positives = 82/87 (94%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEA WFKAG+QIFS+GGLDYLGNP+LVHAQS+LAIWACQVVLMG
Sbjct: 111 LGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMG 170
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYR+ GGPLGE +D +YPGG+FDP
Sbjct: 171 AVEGYRIAGGPLGEIVDPLYPGGSFDP 197
Score = 128 bits (322), Expect(2) = 2e-70
Identities = 66/103 (64%), Positives = 73/103 (70%), Gaps = 4/103 (3%)
Frame = +1
Query: 82 TTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTP 249
++SF G A + +GD R+ MR+T A Q S WYG DR YLGP S + P
Sbjct: 10 SSSFAGKAVKNLPSSALIGD--ARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPP 67
Query: 250 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 378
SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGA
Sbjct: 68 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 110
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
(LHCII type I CAB-2) (LHCP)
Length = 261
Score = 158 bits (399), Expect(2) = 3e-70
Identities = 69/87 (79%), Positives = 82/87 (94%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG
Sbjct: 106 LGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMG 165
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYR+ GGPLGE +D +YPGG+FDP
Sbjct: 166 AVEGYRIAGGPLGEVVDPLYPGGSFDP 192
Score = 127 bits (319), Expect(2) = 3e-70
Identities = 62/81 (76%), Positives = 66/81 (81%), Gaps = 4/81 (4%)
Frame = +1
Query: 148 GRITMRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 315
GRITMR++ +A S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 25 GRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADP 84
Query: 316 ETFAKNRELEVIHSRWAMLGA 378
ETFAKNRELEVIHSRWAMLGA
Sbjct: 85 ETFAKNRELEVIHSRWAMLGA 105
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
(LHCII type I CAB-1) (LHCP)
Length = 265
Score = 159 bits (402), Expect(2) = 6e-70
Identities = 70/87 (80%), Positives = 82/87 (94%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG
Sbjct: 110 LGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMG 169
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYR+ GGPLGE +D +YPGGAFDP
Sbjct: 170 AVEGYRIAGGPLGEVVDPLYPGGAFDP 196
Score = 125 bits (313), Expect(2) = 6e-70
Identities = 61/81 (75%), Positives = 65/81 (80%), Gaps = 5/81 (6%)
Frame = +1
Query: 151 RITMRRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 315
RITMR+T ++ S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 29 RITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADP 88
Query: 316 ETFAKNRELEVIHSRWAMLGA 378
ETFAKNRELEVIHSRWAMLGA
Sbjct: 89 ETFAKNRELEVIHSRWAMLGA 109
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
(LHCII type I CAB-2) (LHCP)
Length = 256
Score = 157 bits (398), Expect(2) = 2e-63
Identities = 69/87 (79%), Positives = 81/87 (93%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMG
Sbjct: 101 LGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMG 160
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGYR+ GGPLGE D IYPGG+FDP
Sbjct: 161 AVEGYRIAGGPLGEVTDPIYPGGSFDP 187
Score = 104 bits (260), Expect(2) = 2e-63
Identities = 55/82 (67%), Positives = 62/82 (75%), Gaps = 5/82 (6%)
Frame = +1
Query: 148 GRITMRRTVKSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSAD 312
GR++MR+T AP+++ WYGPDR KYLGPFS + PSYLTGEF G LSAD
Sbjct: 30 GRVSMRKT---APKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFHG--------LSAD 78
Query: 313 PETFAKNRELEVIHSRWAMLGA 378
PETFAKNRELEVIHSRWAMLGA
Sbjct: 79 PETFAKNRELEVIHSRWAMLGA 100
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
(LHCII type I CAB-48) (LHCP)
Length = 264
Score = 145 bits (365), Expect(2) = 5e-63
Identities = 65/87 (74%), Positives = 77/87 (88%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GCVFPE+L++NG+KFGE VWFKAG+QIFSEGGL + GNP+LVHAQSILAIWACQVVLMG
Sbjct: 109 LGCVFPELLARNGVKFGEGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMG 168
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
+EGY V GG LGE +D +Y GG+FDP
Sbjct: 169 AVEGYHVAGGRLGEVVDPLYLGGSFDP 195
Score = 116 bits (290), Expect(2) = 5e-63
Identities = 58/78 (74%), Positives = 60/78 (76%), Gaps = 4/78 (5%)
Frame = +1
Query: 148 GRITMRRTV-KSAPQ---SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 315
GRITMR+T K P S WYG DR YLGP S PSYLTGEFPGDYGWDT GLSADP
Sbjct: 28 GRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSADP 87
Query: 316 ETFAKNRELEVIHSRWAM 369
ETFAKNRELEVIH RWA+
Sbjct: 88 ETFAKNRELEVIHCRWAI 105
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
chloroplast precursor (CAB) (LHCP)
Length = 253
Score = 143 bits (360), Expect(2) = 1e-60
Identities = 66/87 (75%), Positives = 76/87 (87%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
+GC PE+L+K+G KFGEAVWFKAGAQIFSEGGLDYLGNP+LVHAQ+I+A A QV+LMG
Sbjct: 98 LGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMG 157
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
IEGYRV GGP GEGLD +YPG +FDP
Sbjct: 158 LIEGYRVNGGPAGEGLDPLYPGESFDP 184
Score = 110 bits (275), Expect(2) = 1e-60
Identities = 53/77 (68%), Positives = 64/77 (83%), Gaps = 4/77 (5%)
Frame = +1
Query: 178 SAPQSI---WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 345
+AP+S +YGP+R K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF + RELE
Sbjct: 27 AAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELE 86
Query: 346 VIHSRWAMLGAHRVRVP 396
+IH+RWAMLGA + P
Sbjct: 87 LIHARWAMLGALGCQTP 103
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
chloroplast precursor (CAB) (LHCP)
Length = 256
Score = 130 bits (327), Expect(2) = 5e-60
Identities = 63/88 (71%), Positives = 73/88 (82%), Gaps = 1/88 (1%)
Frame = +2
Query: 380 IGCVFPEILSKN-GIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLM 556
+G + PE+LS G+KFGE VWFKAGAQIFSEGGLDYLG+P L+HAQ+I+A A QVVLM
Sbjct: 100 LGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLM 159
Query: 557 GFIEGYRVGGGPLGEGLDIIYPGGAFDP 640
G IEGYRV GGP GEGLD +YPG +FDP
Sbjct: 160 GLIEGYRVNGGPAGEGLDPLYPGESFDP 187
Score = 120 bits (302), Expect(2) = 5e-60
Identities = 53/67 (79%), Positives = 58/67 (86%)
Frame = +1
Query: 196 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 375
WYGPDR K+LGPFS TP+YLTGEFPGDYGWDTAGLSADPETF K RELEVIH+RWA+LG
Sbjct: 39 WYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLG 98
Query: 376 AHRVRVP 396
A + P
Sbjct: 99 ALGILTP 105
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
(LHCII type III CAB-13)
Length = 265
Score = 128 bits (321), Expect(2) = 4e-58
Identities = 64/100 (64%), Positives = 67/100 (67%)
Frame = +1
Query: 79 QTTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYL 258
+ T FLG + L V R TM +WYGPDR KYLGPFS QTPSYL
Sbjct: 15 KATPFLGQTKNANPLRDVVAMGSARFTMSN-------DLWYGPDRVKYLGPFSAQTPSYL 67
Query: 259 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 378
GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGA
Sbjct: 68 NGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGA 107
Score = 117 bits (292), Expect(2) = 4e-58
Identities = 60/90 (66%), Positives = 72/90 (80%), Gaps = 3/90 (3%)
Frame = +2
Query: 380 IGCVFPEILSK-NGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLM 556
+GC+FPE+L K + F E VWFKAG+QIFS+GGLDYLGNPNLVHAQSILA+ QVVLM
Sbjct: 108 LGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLM 167
Query: 557 GFIEGYRVGGGP-LGEGLDIIYPGGA-FDP 640
G +EG+R+ G P +GEG D +YPGG FDP
Sbjct: 168 GLVEGFRINGLPGVGEGND-LYPGGQYFDP 196
Score = 30.0 bits (66), Expect = 6.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 268 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 369
+PG +D GL+ DP TFA+ + E+ + R AM
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAM 221
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
chloroplast precursor (CAB)
Length = 268
Score = 125 bits (314), Expect(2) = 6e-58
Identities = 59/77 (76%), Positives = 61/77 (79%)
Frame = +1
Query: 148 GRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 327
GRITM +WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA
Sbjct: 41 GRITMGN-------DLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFA 93
Query: 328 KNRELEVIHSRWAMLGA 378
+NR LEVIH RWAMLGA
Sbjct: 94 RNRALEVIHGRWAMLGA 110
Score = 119 bits (297), Expect(2) = 6e-58
Identities = 61/90 (67%), Positives = 73/90 (81%), Gaps = 3/90 (3%)
Frame = +2
Query: 380 IGCVFPEILSK-NGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLM 556
+GCVFPE+L K G++F E VWFKAG+QIFSEGGLDYLGNPNLVHAQSILA+ QV+LM
Sbjct: 111 LGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLM 170
Query: 557 GFIEGYRVGG-GPLGEGLDIIYPGGA-FDP 640
G +EG+R+ G +GEG D +YPGG FDP
Sbjct: 171 GLVEGFRINGLDGVGEGND-LYPGGQYFDP 199
Score = 29.6 bits (65), Expect = 7.9
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 268 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 369
+PG +D GL+ DP TFA+ + E+ + R AM
Sbjct: 191 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAM 224
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
precursor (LHCII type I CAB-AB10) (LHCP)
Length = 268
Score = 135 bits (339), Expect(2) = 3e-55
Identities = 66/93 (70%), Positives = 76/93 (81%), Gaps = 2/93 (2%)
Frame = +2
Query: 365 RC--SEPIGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA 538
RC S +GC+FPE+LS G FGEAVWFKAGAQIFSEGGLDYLGNP+LVHAQSILAIW
Sbjct: 107 RCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWT 166
Query: 539 CQVVLMGFIEGYRVGGGPLGEGLDIIYPGGAFD 637
+V+LMG +EGYR+ GPLGE D +YP G+FD
Sbjct: 167 TKVILMGAVEGYRIARGPLGEVTDPLYP-GSFD 198
Score = 100 bits (248), Expect(2) = 3e-55
Identities = 48/56 (85%), Positives = 49/56 (87%)
Frame = +1
Query: 211 RPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 378
R KYLGPFS + PSYLTGEFPGDYGWDTAGLSA PETFAKNRELEVIHSR AM A
Sbjct: 58 RVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAA 113
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
chloroplast precursor (CAB) (LHCP)
Length = 253
Score = 113 bits (283), Expect(2) = 3e-52
Identities = 53/85 (62%), Positives = 68/85 (80%), Gaps = 3/85 (3%)
Frame = +1
Query: 151 RITMRRTVKSAPQSI--WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPET 321
R T ++ + + P++ +YGPDR K+LGPFSE TP YLTGEFPGDYGWDTAGLSADP+T
Sbjct: 16 RQTRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQT 75
Query: 322 FAKNRELEVIHSRWAMLGAHRVRVP 396
FA+ RE+E+IH+RWA+LGA + P
Sbjct: 76 FARYREIELIHARWALLGALGILTP 100
Score = 111 bits (278), Expect(2) = 3e-52
Identities = 55/90 (61%), Positives = 69/90 (76%), Gaps = 3/90 (3%)
Frame = +2
Query: 380 IGCVFPEILSKN-GIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLM 556
+G + PE+LS+ G++FGE VWFKAGAQIF++GGL+YLGN +L+HAQSI+A A QVVLM
Sbjct: 95 LGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLM 154
Query: 557 GFIEGYRVGGGPLG--EGLDIIYPGGAFDP 640
G E YR GG G + LD +YPGG FDP
Sbjct: 155 GLAEAYRANGGSEGFLDDLDTLYPGGPFDP 184
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
chloroplast precursor (CAB) (LHCP)
Length = 273
Score = 125 bits (314), Expect(2) = 1e-45
Identities = 60/89 (67%), Positives = 75/89 (84%), Gaps = 2/89 (2%)
Frame = +2
Query: 380 IGCVFPEILS-KNGIKFGEA-VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 553
+G V PE+L+ ++GIKFG+A +WFKAGA IF +GGL+YLGNP+L+HAQ+I+A A QVVL
Sbjct: 117 LGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVL 176
Query: 554 MGFIEGYRVGGGPLGEGLDIIYPGGAFDP 640
MG +EGYRV GGP GEGLD +YPG AFDP
Sbjct: 177 MGLVEGYRVNGGPAGEGLDPLYPGEAFDP 205
Score = 78.2 bits (191), Expect(2) = 1e-45
Identities = 39/67 (58%), Positives = 46/67 (68%)
Frame = +1
Query: 178 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 357
S+ + +YGPD Q P TGEFPGDYGWDTAGLSADPETF + RELE+IH+
Sbjct: 51 SSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHA 109
Query: 358 RWAMLGA 378
R +LGA
Sbjct: 110 RCGLLGA 116
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
precursor (Light-harvesting complex II protein 5)
(LHCB5) (LHCIIc)
Length = 280
Score = 71.6 bits (174), Expect(2) = 5e-23
Identities = 35/70 (50%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = +1
Query: 196 WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 366
WYGPDR +L + P YL GE GDYG+D GL PE FAK + E+IH+RWA
Sbjct: 62 WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWA 121
Query: 367 MLGAHRVRVP 396
MLGA +P
Sbjct: 122 MLGAAGFIIP 131
Score = 55.8 bits (133), Expect(2) = 5e-23
Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +2
Query: 383 GCVFPEILSKNGIKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 559
G + PE L+K G G EAVWFK GA + L+Y G + +LA+ A +VVL+G
Sbjct: 127 GFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVA-EVVLLG 183
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
E YR+ G E D ++PGG FDP
Sbjct: 184 GAEYYRITNGLDFE--DKLHPGGPFDP 208
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
(LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
protein)
Length = 246
Score = 54.3 bits (129), Expect(2) = 1e-09
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +1
Query: 247 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAHRVRVP 396
PSYL G PGD+G+D+ GL P + +E E+IH RWAML + VP
Sbjct: 56 PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVP 105
Score = 28.1 bits (61), Expect(2) = 1e-09
Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +2
Query: 383 GCVFPEILSKNGIKFGEAVWFKAGAQIFSEGG-LDYLGNPNLVHAQSILAIWACQVVLMG 559
G + PE L G W KA GG YLG P V ++ I A + + +
Sbjct: 101 GIIVPEAL-------GLGNWVKAQEWAAIPGGQATYLGQP--VPWGTLPTILAIEFLAIA 151
Query: 560 FIEGYRVGGGPLGEGLDIIYPGGAFDP 640
F+E R + YPGGAFDP
Sbjct: 152 FVEHQR---SMEKDSEKKKYPGGAFDP 175
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
[Contains: LH38 protein 1; LH38 protein 2; LH38 protein
3] (Fragment)
Length = 530
Score = 55.1 bits (131), Expect = 2e-07
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = +1
Query: 247 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAHRVRVP 396
PS+L GE+ GD G+D AGL+ADP+TF + R EV H R AML VP
Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVP 61
Score = 50.4 bits (119), Expect = 4e-06
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = +1
Query: 247 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAHRVRVP 396
P YLTGE GD G+D AGL+ADP TF + + EV H R +ML VP
Sbjct: 381 PRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVP 430
Score = 50.4 bits (119), Expect(2) = 5e-08
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +1
Query: 241 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 372
+ P+ LTGE+P D G+D L+ADP+ +A+ R EV H R AML
Sbjct: 195 EPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAML 238
Score = 26.2 bits (56), Expect(2) = 5e-08
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 380 IGCVFPEILSKNGIKFGEAVWFKAGAQI 463
+GC+ PE+L G+ WF+AG +
Sbjct: 241 VGCIVPELL-------GKGAWFEAGDSV 261
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
precursor (LHCII protein 4.3) (LHCB4.3)
Length = 276
Score = 31.2 bits (69), Expect = 2.7
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 268 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 372
+PG Y +D GL+ADPE + E+ HSR AM+
Sbjct: 218 YPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMV 251
Score = 28.9 bits (63), Expect(2) = 0.019
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +2
Query: 440 WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFIEGYRVGGGPLGEGLDI-- 613
W AG EG YLG P +++ I +V+++G+IE R LD
Sbjct: 166 WQDAGKVELVEGS-SYLGQPLPFSLTTLIWI---EVLVVGYIEFQR------NSELDPEK 215
Query: 614 -IYPGGAFDP 640
IYPGG FDP
Sbjct: 216 RIYPGGYFDP 225
Score = 28.5 bits (62), Expect(2) = 0.019
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 334 RELEVIHSRWAMLG 375
RE E+IH RWAMLG
Sbjct: 138 RECELIHGRWAMLG 151
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
precursor (LHCII protein 4.2) (LHCB4.2)
Length = 287
Score = 32.3 bits (72), Expect = 1.2
Identities = 28/98 (28%), Positives = 33/98 (33%), Gaps = 43/98 (43%)
Frame = +1
Query: 208 DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------- 333
DRP + ++P YL G GDYG+D GL E AKN
Sbjct: 51 DRPLWFP--GAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIG 108
Query: 334 -------------------------RELEVIHSRWAML 372
RE E+IH RWAML
Sbjct: 109 TRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAML 146
Score = 30.0 bits (66), Expect = 6.1
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 268 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 375
+PG +D GL++DP A+ + E+ H+R AM+G
Sbjct: 214 YPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVG 249
>MCPH1_HUMAN (Q8NEM0) Microcephalin|
Length = 835
Score = 29.6 bits (65), Expect = 7.9
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 149 PPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACE 30
PPK R RS+RR +PR + C ++ + VAG A E
Sbjct: 366 PPKEKCKRKRSTRRSIMPR--LQLCRSEGRLQHVAGPALE 403
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,665,672
Number of Sequences: 219361
Number of extensions: 1868953
Number of successful extensions: 7132
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 6715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7109
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)