| Clone Name | basd26c05 |
|---|---|
| Clone Library Name | barley_pub |
>WNK4_HUMAN (Q96J92) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1) (Protein| kinase with no lysine 4) (Protein kinase, lysine-deficient 4) Length = 1243 Score = 32.3 bits (72), Expect = 1.2 Identities = 24/87 (27%), Positives = 31/87 (35%) Frame = +2 Query: 86 PCGGXXXXXXXXXXXXRSTCQPPDLSSPTTRQHTIPSLHLYYLLQCPWSWLPPSSYPATA 265 PC S P SSP + P + L QCPWS LP +S P + Sbjct: 835 PCHPSPSPFSPISSQVSSNPSPHPTSSPLPFSSSTPEFPVP-LSQCPWSSLPTTSPPTFS 893 Query: 266 VMAASASSLGTCFPALTWSSSLSSRNA 346 + + FP +SS S A Sbjct: 894 PTCSQVTLSSPFFPPCPSTSSFPSTTA 920
>Y1249_ARCFU (O29019) Hypothetical protein AF1249| Length = 140 Score = 32.0 bits (71), Expect = 1.6 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Frame = +1 Query: 166 AHYKAAYYTILAFVLFVAVPVELATAFFLPSHSRDGRLRV----FAWYLLPCAYVVLLLV 333 AHY T LA + A+P+ T F +++G LR F+ LL A V++LL Sbjct: 53 AHYSVDAITALAITIIAAIPLTAVTERF----AKNGELRAYYISFSLILLFFAAVMILLF 108 Query: 334 ISEC 345 ++ C Sbjct: 109 VNTC 112
>VMSA_HBVIA (P24025) Major surface antigen precursor| Length = 388 Score = 32.0 bits (71), Expect = 1.6 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +3 Query: 84 CPVVAGLPHSCPGPDHRAPPASRRTCLRPLQGSILYHPCICT 209 CP++ G + GP RTC P QG+ +Y C CT Sbjct: 269 CPLIPGSSTTSTGPC--------RTCTTPAQGTSMYPSCCCT 302
>ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 protein homolog)| Length = 1285 Score = 31.2 bits (69), Expect = 2.7 Identities = 15/46 (32%), Positives = 21/46 (45%) Frame = -2 Query: 167 AKTGPAAGRWSAVVRARTRVREPSHHRARPSCGTAGGEAEGSMECS 30 A+T PA G WS+VV R+ +H P + G G + S Sbjct: 633 ARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQSSIGNSPSGPVLAS 678
>HIPK2_MESAU (Q9WUM7) Homeodomain-interacting protein kinase 2 (EC 2.7.11.1)| (Mx-interacting protein kinase) (PKM) Length = 1168 Score = 30.8 bits (68), Expect = 3.5 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 6/48 (12%) Frame = -3 Query: 565 GYHSVTCRTIKFIPPSM--SSSVTTIFPWSSPKLILEQYI----STGY 440 G HS C K IPPS S++V+T P +P L EQ I STG+ Sbjct: 45 GSHSKLCSQSKNIPPSQPASTTVSTSLPIPNPSLPYEQTIIFPGSTGH 92
>GAS7_HUMAN (O60861) Growth-arrest-specific protein 7 (GAS-7)| Length = 412 Score = 30.8 bits (68), Expect = 3.5 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Frame = -3 Query: 217 QQIVQMQGWYSMLPCSGRRQ-VRRLAGGARWSGPGQE*GSPATTGHAPAVVPP 62 Q ++ GW S L GRR V W P G PA+ G + +PP Sbjct: 11 QTVILPPGWQSYLSPQGRRYYVNTTTNETTWERPSSSPGIPASPGSHRSSLPP 63
>VMSA_HBVYW (P03138) Major surface antigen precursor| Length = 388 Score = 30.0 bits (66), Expect = 6.0 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +3 Query: 84 CPVVAGLPHSCPGPDHRAPPASRRTCLRPLQGSILYHPCICT 209 CP++ G + GP RTC+ QG+ +Y C CT Sbjct: 269 CPLIPGSSTTSTGPC--------RTCMTTAQGTSMYPSCCCT 302
>OLIG2_CHICK (Q90XB3) Oligodendrocyte transcription factor 2| Length = 298 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/56 (32%), Positives = 22/56 (39%) Frame = +3 Query: 12 IHHDEHTAFHATLCFATGGTTAGACPVVAGLPHSCPGPDHRAPPASRRTCLRPLQG 179 I+ H AFH C A G + P G P S P PPA+ + P G Sbjct: 174 IYGGHHAAFHPAACPAGMGAHSAPLPAHPGHPASHPAHHPILPPAAVSSASLPGSG 229
>VMSA_HBVAY (P03139) Major surface antigen precursor| Length = 388 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = +3 Query: 84 CPVVAGLPHSCPGPDHRAPPASRRTCLRPLQGSILYHPCICT 209 CP++ G + G S RTC P QG +Y C CT Sbjct: 269 CPLIPGSSTTSTG--------SCRTCTTPAQGISMYPSCCCT 302
>ACH3_CAEEL (P54244) Acetylcholine receptor, alpha-type subunit deg-3 precursor| Length = 564 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -3 Query: 586 LTPAISLGYHSVTCR-TIKFIPPSMSSSVTTIFPWSSPKLILEQYIST 446 L PAI +++TCR I+F P + TI W++ K L+ Y T Sbjct: 176 LYPAI----YTITCRLNIRFFPYDRQNCTLTISSWTNSKSALDYYADT 219
>SO2A1_MOUSE (Q9EPT5) Solute carrier organic anion transporter family member 2A1| (Solute carrier family 21 member 2) (Prostaglandin transporter) (PGT) Length = 643 Score = 29.6 bits (65), Expect = 7.9 Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Frame = +3 Query: 87 PVVAGL-PHSCPGPDHRAPPASRRTCLRPLQGSILYHPCICTICCSARGAGY 239 P VA + P S P H PPA RR CL P ++HP C G Y Sbjct: 422 PAVAEVYPPSTPSSIHPQPPACRRDCLCP---DSVFHP-----VCGDNGVEY 465
>ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 protein)| (Trinucleotide repeat-containing gene 13 protein) Length = 1312 Score = 29.6 bits (65), Expect = 7.9 Identities = 14/46 (30%), Positives = 21/46 (45%) Frame = -2 Query: 167 AKTGPAAGRWSAVVRARTRVREPSHHRARPSCGTAGGEAEGSMECS 30 A+T P+ G WS+VV R+ +H P + G G + S Sbjct: 663 ARTSPSGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPSGPVLAS 708 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,445,514 Number of Sequences: 219361 Number of extensions: 1944463 Number of successful extensions: 6610 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 6049 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6606 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)