>MAML2_HUMAN (Q8IZL2) Mastermind-like protein 2 (Mam-2)|
          Length = 1153

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +1

Query: 196 KDQKLQRRLAAAAGGTSAPYPPDLTPSASYLEARASSAPPP 318
           K  K  +  A AA  T+ P PP   P+AS   A A+  PPP
Sbjct: 88  KAGKHTKATATAATTTAPPPPPAAPPAASQAAATAAPPPPP 128



 Score = 30.4 bits (67), Expect = 3.4
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 217 RLAAAAGGTSAPYPPDLTPSASYLEARASSAPPPLRYPDDF 339
           +  A A  T+AP PP   P A+  +A A++APPP   P D+
Sbjct: 94  KATATAATTTAPPPPPAAPPAA-SQAAATAAPPP---PPDY 130

>PPNK_XANOM (Q2P310) Probable inorganic polyphosphate/ATP-NAD kinase (EC|
           2.7.1.23) (Poly(P)/ATP NAD kinase)
          Length = 258

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 21/66 (31%), Positives = 32/66 (48%)
 Frame = +3

Query: 99  RQEKQSSHLDLDLDGEEAQVAGRRQEGIQPRIKGPEIAEEVGXXXXXHQRTLPAGSDALR 278
           RQ +Q++HL +DL+G + ++A    +G+   +  P  A         H   LP GS  L 
Sbjct: 123 RQTRQAAHLSIDLNG-QTRIAELIGDGVM--VATP--AGSTAYNYSAHGPILPLGSHTLA 177

Query: 279 LLPRGP 296
           L P  P
Sbjct: 178 LTPIAP 183

>PPNK_XANAC (Q8PM39) Probable inorganic polyphosphate/ATP-NAD kinase (EC|
           2.7.1.23) (Poly(P)/ATP NAD kinase)
          Length = 258

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 21/66 (31%), Positives = 32/66 (48%)
 Frame = +3

Query: 99  RQEKQSSHLDLDLDGEEAQVAGRRQEGIQPRIKGPEIAEEVGXXXXXHQRTLPAGSDALR 278
           RQ +Q++HL +DL+G + ++A    +G+   +  P  A         H   LP GS  L 
Sbjct: 123 RQTRQAAHLSIDLNG-QTRIAELIGDGVM--VATP--AGSTAYNYSAHGPILPLGSHTLA 177

Query: 279 LLPRGP 296
           L P  P
Sbjct: 178 LTPIAP 183

>VP61_NPVOP (O10270) 61 kDa protein homolog|
          Length = 474

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 36/122 (29%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
 Frame = +1

Query: 16  QQXPVASPHRISP--FLHVLPLPAQDKTRQ---DKRSKAAILILILMGKKPKWLGAVKKA 180
           QQ P   P  +SP  F+H  P      T+    D  S+ +   + + GK+          
Sbjct: 180 QQTPFDQPEMVSPPSFVHTTPAILPQTTQPPATDTFSRPSDEFVYVPGKER---AVPDTR 236

Query: 181 FSPE--SKDQKLQRRLAA----AAGGTSAPYPPDLTPSASYLEARASSAPPPLRYPDDFP 342
           F P    K + L+ R ++    AAG T    PP   PSA       +S PPP   P  FP
Sbjct: 237 FKPPVPPKPEHLKSRPSSVATNAAGATPVAPPPPPFPSADV----TTSMPPP---PPPFP 289

Query: 343 EA 348
            A
Sbjct: 290 SA 291

>ADRB3_MOUSE (P25962) Beta-3 adrenergic receptor (Beta-3 adrenoceptor) (Beta-3|
           adrenoreceptor)
          Length = 400

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
 Frame = +1

Query: 157 WLGAVKKAFSP----ESKD-QKLQRRLAAAAGGTSAPYPPDLTPSASYLEARASSAPPPL 321
           WLG    AF+P     S D +   RRL  + GG     P  +T  AS +EAR S   PPL
Sbjct: 330 WLGYANSAFNPVIYCRSPDFRDAFRRLLCSYGGRGPEEPRAVTFPASPVEARQS---PPL 386

Query: 322 RYPDDFPEA 348
              D +  A
Sbjct: 387 NRFDGYEGA 395

>Y369_TREPA (O83384) Hypothetical protein TP0369 precursor|
          Length = 516

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
 Frame = +1

Query: 25  PVASPHRISPFLHVLPLPAQDKTRQDKRSKAAILILILMGK--KPKWLGAVKKAFS-PES 195
           P A+P R+       P  +Q++ ++ + SK  ++  + +    KP+  G+V      PE 
Sbjct: 65  PAAAPERV-------PESSQEREQKPESSKPQVVEPVSLASPVKPREAGSVPDVLPVPEV 117

Query: 196 KDQKLQRRL--AAAAGGTSAPYPPDLTPSASYLEARA-SSAPPPLRYP 330
               +      A  A     P PP ++PSAS  + RA   +PPP   P
Sbjct: 118 SSPHVAPPAPPAPTAPRPHRPSPPPVSPSASKPKQRAVPPSPPPASEP 165

>DHX37_HUMAN (Q8IY37) Probable ATP-dependent RNA helicase DHX37 (EC 3.6.1.-)|
           (DEAH box protein 37)
          Length = 1157

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 11/73 (15%)
 Frame = +1

Query: 145 KKPKWLGAVKKAFSPESKDQKLQRR-----------LAAAAGGTSAPYPPDLTPSASYLE 291
           K+ +W  A ++    E  + +L+               A  G T AP PP   PS+  + 
Sbjct: 152 KRRRWPSAEEEEEEEEESESELEEESELDEDPAAEPAEAGVGTTVAPLPPAPAPSSQPVP 211

Query: 292 ARASSAPPPLRYP 330
           A  +  PPP   P
Sbjct: 212 AGMTVPPPPAAAP 224

>LRP5_HUMAN (O75197) Low-density lipoprotein receptor-related protein 5 precursor|
          Length = 1615

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +1

Query: 244  SAPYPPDLTPSASYLEARASSAPPP 318
            S PYPP  TP + YL A  S  P P
Sbjct: 1570 SDPYPPPPTPHSQYLSAEDSCPPSP 1594

>LRP5_MOUSE (Q91VN0) Low-density lipoprotein receptor-related protein 5 precursor|
            (LRP7) (Lr3)
          Length = 1614

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +1

Query: 244  SAPYPPDLTPSASYLEARASSAPPP 318
            S PYPP  TP + YL A  S  P P
Sbjct: 1569 SDPYPPPPTPHSQYLSAEDSCPPSP 1593

>MFP_ORYSA (Q8W1L6) Peroxisomal fatty acid beta-oxidation multifunctional|
           protein (MFP) [Includes: Enoyl-CoA hydratase (EC
           4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8);
           3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3);
           3-hydroxyacyl-CoA dehydrogenase
          Length = 725

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = +1

Query: 10  TNQQXPVASPHRISPFLHVLPLPAQDKTRQDKRSKAAILILILMGKKPK 156
           TN Q  +   H  SP  H++PL   +  R +K S  AIL LI +GK  K
Sbjct: 436 TNSQDRIIGAHFFSP-AHIMPL--LEIVRTEKTSPQAILDLITVGKMIK 481

>DYR1B_HUMAN (Q9Y463) Dual specificity tyrosine-phosphorylation-regulated kinase|
           1B (EC 2.7.12.1) (Mirk protein kinase)
           (Minibrain-related kinase)
          Length = 629

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
 Frame = +1

Query: 148 KPKWLGAVKKAFSPESKDQKLQRRLAAAAGGTSAPYPPDLT--PSASYLEARASSAPPPL 321
           +P++LG      SP   +  +   L       S P+P      P+AS L  R +   PPL
Sbjct: 545 QPRYLGRPPSPTSPPPPEL-MDVSLVGGPADCSPPHPAPAPQHPAASALRTRMTGGRPPL 603

Query: 322 RYPDD 336
             PDD
Sbjct: 604 PPPDD 608

>THAP1_BOVIN (Q3T0G1) THAP domain-containing protein 1|
          Length = 213

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 250 PYPPDLTPSASYLEARASSAPPPLRYPDD 336
           P PP LTP  S ++A      PPL+ PD+
Sbjct: 100 PPPPPLTPPISQVDAAIGLLMPPLQTPDN 128

>INO80_NEUCR (Q872I5) Putative DNA helicase ino-80 (EC 3.6.1.-)|
          Length = 2001

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = +1

Query: 163 GAVKKAFSPESKDQKLQRRLAAAAGGTSAPYPPDLTPSASYLEARASSAPPP 318
           G ++   +P S +  +Q + AAAA     P PP    S+S L   A+S PPP
Sbjct: 42  GGLRDILNPVSSNSAVQSQAAAAA-----PPPPPAVASSS-LHGIAASVPPP 87

>PDLI2_RAT (Q6AYD6) PDZ and LIM domain protein 2|
          Length = 349

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 223 AAAAGGTSAPYPPDLTPSASYLEARASSAPPPL 321
           A   GGT A  P  L+P AS   +RA + PP L
Sbjct: 248 AEERGGTPAFVPSSLSPKASLPTSRALATPPKL 280

>PLIN_RAT (P43884) Perilipin (PERI) (Lipid droplet-associated protein)|
          Length = 517

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 21/60 (35%), Positives = 27/60 (45%)
 Frame = +1

Query: 163 GAVKKAFSPESKDQKLQRRLAAAAGGTSAPYPPDLTPSASYLEARASSAPPPLRYPDDFP 342
           G+  +  SPES  +  Q R A A  G SAP  PDL       +   S+ P  L  P + P
Sbjct: 433 GSGSRPASPESTARPGQPRAACAVRGLSAPSCPDLDD-----KTETSARPGLLAMPREKP 487

>SMAD5_BRARE (Q9W7E7) Mothers against decapentaplegic homolog 5 (SMAD 5)|
           (Mothers against DPP homolog 5) (Smad5) (Somitabun
           protein)
          Length = 464

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 244 SAPYPPDLTPSASYLEARASSAP-PPLRYPDDFP 342
           ++PYPP    S +Y  + ASS P  P + P D P
Sbjct: 191 NSPYPPSPASSGTYPNSPASSGPSSPFQLPADTP 224


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.130    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,799,019
Number of Sequences: 219361
Number of extensions: 825870
Number of successful extensions: 3477
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3472
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)