| Clone Name | basd26b04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_475118.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 867 Score = 331 bits (167), Expect = 2e-87 Identities = 362/427 (84%) Strand = Plus / Plus Query: 179 aagccattcaatttcctccagatcctctgcgagggcgtcatagccggaggcaccgccggg 238 ||||| ||||| ||||||||||| || || |||||||||||||| || |||||||| || Sbjct: 25 aagcccttcaacttcctccagattctgtgtgagggcgtcatagctggtggcaccgcgggt 84 Query: 239 gtcgtggtggagacggcgctctaccccatcgacaccatcaagaccaggcttcaggctgct 298 || |||||||| || || || ||||| || || || || || |||||||||||||||||| Sbjct: 85 gtggtggtggaaacagctctgtacccgattgatacgataaaaaccaggcttcaggctgct 144 Query: 299 cgagctggaagtcaaattcaatggaaaggcctgtattccggattaggtggaaatcttgtc 358 || | ||||||||||||||||||||||| ||||||| ||||||| ||||||| ||| Sbjct: 145 cggggaggaagtcaaattcaatggaaaggattgtattctggattagctggaaatattgct 204 Query: 359 ggtgttctcccggcttctgctctgtttgtggggatatacgaaccaactaaacggaagcta 418 ||||||||||||||||||||| | |||||||| ||||||||||| || ||| | || ||| Sbjct: 205 ggtgttctcccggcttctgctgtatttgtgggaatatacgaaccgacaaaaagaaaacta 264 Query: 419 ctggacatgtttcctgaaaatttgagtgctgttgctcatcttactgcaggtgctgttgga 478 ||||| | |||||||||||||||||||||||||| ||| ||||||| || ||| ||||| Sbjct: 265 ctggagacttttcctgaaaatttgagtgctgttgcccattttactgccggggctattgga 324 Query: 479 gggttgggtgcttctctcattcgtgtccccacagaggtggtcaaacaaaggatgcaaact 538 || | | |||||||||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 325 ggaattgcggcttctctcattcgcgtccccacagaggttgtcaaacaaagaatgcaaaca 384 Query: 539 ggtcaatttaggactgcgcctgatgctgttcgtctgatagttgccaaggaaggatttaga 598 |||||||| ||| |||| ||||||||||||||||| || |||| || |||||||| ||| Sbjct: 385 ggtcaattcaggtctgcacctgatgctgttcgtctcattgttggtaaagaaggattcaga 444 Query: 599 ggccttt 605 || |||| Sbjct: 445 ggtcttt 451
>dbj|AK104747.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-E09, full insert sequence Length = 1168 Score = 331 bits (167), Expect = 2e-87 Identities = 362/427 (84%) Strand = Plus / Plus Query: 179 aagccattcaatttcctccagatcctctgcgagggcgtcatagccggaggcaccgccggg 238 ||||| ||||| ||||||||||| || || |||||||||||||| || |||||||| || Sbjct: 131 aagcccttcaacttcctccagattctgtgtgagggcgtcatagctggtggcaccgcgggt 190 Query: 239 gtcgtggtggagacggcgctctaccccatcgacaccatcaagaccaggcttcaggctgct 298 || |||||||| || || || ||||| || || || || || |||||||||||||||||| Sbjct: 191 gtggtggtggaaacagctctgtacccgattgatacgataaaaaccaggcttcaggctgct 250 Query: 299 cgagctggaagtcaaattcaatggaaaggcctgtattccggattaggtggaaatcttgtc 358 || | ||||||||||||||||||||||| ||||||| ||||||| ||||||| ||| Sbjct: 251 cggggaggaagtcaaattcaatggaaaggattgtattctggattagctggaaatattgct 310 Query: 359 ggtgttctcccggcttctgctctgtttgtggggatatacgaaccaactaaacggaagcta 418 ||||||||||||||||||||| | |||||||| ||||||||||| || ||| | || ||| Sbjct: 311 ggtgttctcccggcttctgctgtatttgtgggaatatacgaaccgacaaaaagaaaacta 370 Query: 419 ctggacatgtttcctgaaaatttgagtgctgttgctcatcttactgcaggtgctgttgga 478 ||||| | |||||||||||||||||||||||||| ||| ||||||| || ||| ||||| Sbjct: 371 ctggagacttttcctgaaaatttgagtgctgttgcccattttactgccggggctattgga 430 Query: 479 gggttgggtgcttctctcattcgtgtccccacagaggtggtcaaacaaaggatgcaaact 538 || | | |||||||||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 431 ggaattgcggcttctctcattcgcgtccccacagaggttgtcaaacaaagaatgcaaaca 490 Query: 539 ggtcaatttaggactgcgcctgatgctgttcgtctgatagttgccaaggaaggatttaga 598 |||||||| ||| |||| ||||||||||||||||| || |||| || |||||||| ||| Sbjct: 491 ggtcaattcaggtctgcacctgatgctgttcgtctcattgttggtaaagaaggattcaga 550 Query: 599 ggccttt 605 || |||| Sbjct: 551 ggtcttt 557
>dbj|AK104602.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G08, full insert sequence Length = 1168 Score = 331 bits (167), Expect = 2e-87 Identities = 362/427 (84%) Strand = Plus / Plus Query: 179 aagccattcaatttcctccagatcctctgcgagggcgtcatagccggaggcaccgccggg 238 ||||| ||||| ||||||||||| || || |||||||||||||| || |||||||| || Sbjct: 131 aagcccttcaacttcctccagattctgtgtgagggcgtcatagctggtggcaccgcgggt 190 Query: 239 gtcgtggtggagacggcgctctaccccatcgacaccatcaagaccaggcttcaggctgct 298 || |||||||| || || || ||||| || || || || || |||||||||||||||||| Sbjct: 191 gtggtggtggaaacagctctgtacccgattgatacgataaaaaccaggcttcaggctgct 250 Query: 299 cgagctggaagtcaaattcaatggaaaggcctgtattccggattaggtggaaatcttgtc 358 || | ||||||||||||||||||||||| ||||||| ||||||| ||||||| ||| Sbjct: 251 cggggaggaagtcaaattcaatggaaaggattgtattctggattagctggaaatattgct 310 Query: 359 ggtgttctcccggcttctgctctgtttgtggggatatacgaaccaactaaacggaagcta 418 ||||||||||||||||||||| | |||||||| ||||||||||| || ||| | || ||| Sbjct: 311 ggtgttctcccggcttctgctgtatttgtgggaatatacgaaccgacaaaaagaaaacta 370 Query: 419 ctggacatgtttcctgaaaatttgagtgctgttgctcatcttactgcaggtgctgttgga 478 ||||| | |||||||||||||||||||||||||| ||| ||||||| || ||| ||||| Sbjct: 371 ctggagacttttcctgaaaatttgagtgctgttgcccattttactgccggggctattgga 430 Query: 479 gggttgggtgcttctctcattcgtgtccccacagaggtggtcaaacaaaggatgcaaact 538 || | | |||||||||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 431 ggaattgcggcttctctcattcgcgtccccacagaggttgtcaaacaaagaatgcaaaca 490 Query: 539 ggtcaatttaggactgcgcctgatgctgttcgtctgatagttgccaaggaaggatttaga 598 |||||||| ||| |||| ||||||||||||||||| || |||| || |||||||| ||| Sbjct: 491 ggtcaattcaggtctgcacctgatgctgttcgtctcattgttggtaaagaaggattcaga 550 Query: 599 ggccttt 605 || |||| Sbjct: 551 ggtcttt 557
>dbj|AK060107.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C07, full insert sequence Length = 1283 Score = 331 bits (167), Expect = 2e-87 Identities = 362/427 (84%) Strand = Plus / Plus Query: 179 aagccattcaatttcctccagatcctctgcgagggcgtcatagccggaggcaccgccggg 238 ||||| ||||| ||||||||||| || || |||||||||||||| || |||||||| || Sbjct: 134 aagcccttcaacttcctccagattctgtgtgagggcgtcatagctggtggcaccgcgggt 193 Query: 239 gtcgtggtggagacggcgctctaccccatcgacaccatcaagaccaggcttcaggctgct 298 || |||||||| || || || ||||| || || || || || |||||||||||||||||| Sbjct: 194 gtggtggtggaaacagctctgtacccgattgatacgataaaaaccaggcttcaggctgct 253 Query: 299 cgagctggaagtcaaattcaatggaaaggcctgtattccggattaggtggaaatcttgtc 358 || | ||||||||||||||||||||||| ||||||| ||||||| ||||||| ||| Sbjct: 254 cggggaggaagtcaaattcaatggaaaggattgtattctggattagctggaaatattgct 313 Query: 359 ggtgttctcccggcttctgctctgtttgtggggatatacgaaccaactaaacggaagcta 418 ||||||||||||||||||||| | |||||||| ||||||||||| || ||| | || ||| Sbjct: 314 ggtgttctcccggcttctgctgtatttgtgggaatatacgaaccgacaaaaagaaaacta 373 Query: 419 ctggacatgtttcctgaaaatttgagtgctgttgctcatcttactgcaggtgctgttgga 478 ||||| | |||||||||||||||||||||||||| ||| ||||||| || ||| ||||| Sbjct: 374 ctggagacttttcctgaaaatttgagtgctgttgcccattttactgccggggctattgga 433 Query: 479 gggttgggtgcttctctcattcgtgtccccacagaggtggtcaaacaaaggatgcaaact 538 || | | |||||||||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 434 ggaattgcggcttctctcattcgcgtccccacagaggttgtcaaacaaagaatgcaaaca 493 Query: 539 ggtcaatttaggactgcgcctgatgctgttcgtctgatagttgccaaggaaggatttaga 598 |||||||| ||| |||| ||||||||||||||||| || |||| || |||||||| ||| Sbjct: 494 ggtcaattcaggtctgcacctgatgctgttcgtctcattgttggtaaagaaggattcaga 553 Query: 599 ggccttt 605 || |||| Sbjct: 554 ggtcttt 560
>dbj|AK065490.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023H18, full insert sequence Length = 1527 Score = 311 bits (157), Expect = 1e-81 Identities = 337/397 (84%) Strand = Plus / Plus Query: 209 gagggcgtcatagccggaggcaccgccggggtcgtggtggagacggcgctctaccccatc 268 |||||||||||||| || |||||||| || || |||||||| || || || ||||| || Sbjct: 219 gagggcgtcatagctggtggcaccgcgggtgtggtggtggaaacagctctgtacccgatt 278 Query: 269 gacaccatcaagaccaggcttcaggctgctcgagctggaagtcaaattcaatggaaaggc 328 || || || || |||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 279 gatacgataaaaaccaggcttcaggctgctcggggaggaagtcaaattcaatggaaagga 338 Query: 329 ctgtattccggattaggtggaaatcttgtcggtgttctcccggcttctgctctgtttgtg 388 ||||||| ||||||| ||||||| ||| ||||||||||||||||||||| | |||||| Sbjct: 339 ttgtattctggattagctggaaatattgctggtgttctcccggcttctgctgtatttgtg 398 Query: 389 gggatatacgaaccaactaaacggaagctactggacatgtttcctgaaaatttgagtgct 448 || ||||||||||| || ||| | || |||||||| | ||||||||||||||||||||| Sbjct: 399 ggaatatacgaaccgacaaaaagaaaactactggagacttttcctgaaaatttgagtgct 458 Query: 449 gttgctcatcttactgcaggtgctgttggagggttgggtgcttctctcattcgtgtcccc 508 ||||| ||| ||||||| || ||| ||||||| | | |||||||||||||| |||||| Sbjct: 459 gttgcccattttactgccggggctattggaggaattgcggcttctctcattcgcgtcccc 518 Query: 509 acagaggtggtcaaacaaaggatgcaaactggtcaatttaggactgcgcctgatgctgtt 568 |||||||| ||||||||||| |||||||| |||||||| ||| |||| |||||||||||| Sbjct: 519 acagaggttgtcaaacaaagaatgcaaacaggtcaattcaggtctgcacctgatgctgtt 578 Query: 569 cgtctgatagttgccaaggaaggatttagaggccttt 605 ||||| || |||| || |||||||| ||||| |||| Sbjct: 579 cgtctcattgttggtaaagaaggattcagaggtcttt 615
>dbj|AK072091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116F02, full insert sequence Length = 2069 Score = 220 bits (111), Expect = 4e-54 Identities = 234/275 (85%) Strand = Plus / Plus Query: 179 aagccattcaatttcctccagatcctctgcgagggcgtcatagccggaggcaccgccggg 238 ||||| ||||| ||||||||||| || || |||||||||||||| || |||||||| || Sbjct: 110 aagcccttcaacttcctccagattctgtgtgagggcgtcatagctggtggcaccgcgggt 169 Query: 239 gtcgtggtggagacggcgctctaccccatcgacaccatcaagaccaggcttcaggctgct 298 || |||||||| || || || ||||| || || || || || |||||||||||||||||| Sbjct: 170 gtggtggtggaaacagctctgtacccgattgatacgataaaaaccaggcttcaggctgct 229 Query: 299 cgagctggaagtcaaattcaatggaaaggcctgtattccggattaggtggaaatcttgtc 358 || | ||||||||||||||||||||||| ||||||| ||||||| ||||||| ||| Sbjct: 230 cggggaggaagtcaaattcaatggaaaggattgtattctggattagctggaaatattgct 289 Query: 359 ggtgttctcccggcttctgctctgtttgtggggatatacgaaccaactaaacggaagcta 418 ||||||||||||||||||||| | |||||||| ||||||||||| || ||| | || ||| Sbjct: 290 ggtgttctcccggcttctgctgtatttgtgggaatatacgaaccgacaaaaagaaaacta 349 Query: 419 ctggacatgtttcctgaaaatttgagtgctgttgc 453 ||||| | |||||||||||||||||||||||||| Sbjct: 350 ctggagacttttcctgaaaatttgagtgctgttgc 384 Score = 115 bits (58), Expect = 2e-22 Identities = 103/118 (87%) Strand = Plus / Plus Query: 488 gcttctctcattcgtgtccccacagaggtggtcaaacaaaggatgcaaactggtcaattt 547 |||||||||||||| |||||||||||||| ||||||||| | |||||||| |||||||| Sbjct: 682 gcttctctcattcgcgtccccacagaggttgtcaaacaaggaatgcaaacaggtcaattc 741 Query: 548 aggactgcgcctgatgctgttcgtctgatagttgccaaggaaggatttagaggccttt 605 ||| |||| ||||||||||||||||| || |||| || |||||||| ||||| |||| Sbjct: 742 aggtctgcacctgatgctgttcgtctcattgttggtaaagaaggattcagaggtcttt 799
>ref|XM_477564.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1226 Score = 180 bits (91), Expect = 4e-42 Identities = 243/291 (83%), Gaps = 2/291 (0%) Strand = Plus / Plus Query: 281 accaggcttcaggctgctcgagctggaagtcaaattcaatggaaaggcctgtattccgga 340 ||||||||||||||||| || ||||||| ||||||||||||||||| ||||| | || Sbjct: 256 accaggcttcaggctgcgaaaggtggaagtaaaattcaatggaaaggcttgtatgctggg 315 Query: 341 ttaggtggaaatcttgtcggtgttctcccggcttctgctctgtttgtggggatatacgaa 400 |||||||||||| ||| |||||||||||||||||||| | ||| | || | || ||| Sbjct: 316 ttaggtggaaatattgctggtgttctcccggcttctgcaatctttataggagtgtatgaa 375 Query: 401 ccaactaaacggaagctactggacatgtttcctgaaaatttgagtgctgttgctcatctt 460 ||||| ||| | || || || || |||||||||||||||||||||||||| |||||| | Sbjct: 376 ccaaccaaaagaaaactgctagaaatgtttcctgaaaatttgagtgctgtggctcatttg 435 Query: 461 actgcaggtgctgttggagg-gttgggtgcttctctcattcgtgtccccacagaggtggt 519 |||||||| || ||||||| | || | ||||||| |||||||| |||||||||||||| Sbjct: 436 actgcaggggcaattggaggtgctgcat-cttctcttattcgtgttcccacagaggtggt 494 Query: 520 caaacaaaggatgcaaactggtcaatttaggactgcgcctgatgctgttcg 570 |||||||||||||||| ||||||| | |||||| |||||||||||||| Sbjct: 495 taaacaaaggatgcaaatgagtcaattcaagactgcacctgatgctgttcg 545
>ref|XM_506268.1| PREDICTED Oryza sativa (japonica cultivar-group), B1120F06.101 mRNA Length = 1291 Score = 180 bits (91), Expect = 4e-42 Identities = 243/291 (83%), Gaps = 2/291 (0%) Strand = Plus / Plus Query: 281 accaggcttcaggctgctcgagctggaagtcaaattcaatggaaaggcctgtattccgga 340 ||||||||||||||||| || ||||||| ||||||||||||||||| ||||| | || Sbjct: 264 accaggcttcaggctgcgaaaggtggaagtaaaattcaatggaaaggcttgtatgctggg 323 Query: 341 ttaggtggaaatcttgtcggtgttctcccggcttctgctctgtttgtggggatatacgaa 400 |||||||||||| ||| |||||||||||||||||||| | ||| | || | || ||| Sbjct: 324 ttaggtggaaatattgctggtgttctcccggcttctgcaatctttataggagtgtatgaa 383 Query: 401 ccaactaaacggaagctactggacatgtttcctgaaaatttgagtgctgttgctcatctt 460 ||||| ||| | || || || || |||||||||||||||||||||||||| |||||| | Sbjct: 384 ccaaccaaaagaaaactgctagaaatgtttcctgaaaatttgagtgctgtggctcatttg 443 Query: 461 actgcaggtgctgttggagg-gttgggtgcttctctcattcgtgtccccacagaggtggt 519 |||||||| || ||||||| | || | ||||||| |||||||| |||||||||||||| Sbjct: 444 actgcaggggcaattggaggtgctgcat-cttctcttattcgtgttcccacagaggtggt 502 Query: 520 caaacaaaggatgcaaactggtcaatttaggactgcgcctgatgctgttcg 570 |||||||||||||||| ||||||| | |||||| |||||||||||||| Sbjct: 503 taaacaaaggatgcaaatgagtcaattcaagactgcacctgatgctgttcg 553
>dbj|AK099295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023137D03, full insert sequence Length = 1226 Score = 180 bits (91), Expect = 4e-42 Identities = 243/291 (83%), Gaps = 2/291 (0%) Strand = Plus / Plus Query: 281 accaggcttcaggctgctcgagctggaagtcaaattcaatggaaaggcctgtattccgga 340 ||||||||||||||||| || ||||||| ||||||||||||||||| ||||| | || Sbjct: 256 accaggcttcaggctgcgaaaggtggaagtaaaattcaatggaaaggcttgtatgctggg 315 Query: 341 ttaggtggaaatcttgtcggtgttctcccggcttctgctctgtttgtggggatatacgaa 400 |||||||||||| ||| |||||||||||||||||||| | ||| | || | || ||| Sbjct: 316 ttaggtggaaatattgctggtgttctcccggcttctgcaatctttataggagtgtatgaa 375 Query: 401 ccaactaaacggaagctactggacatgtttcctgaaaatttgagtgctgttgctcatctt 460 ||||| ||| | || || || || |||||||||||||||||||||||||| |||||| | Sbjct: 376 ccaaccaaaagaaaactgctagaaatgtttcctgaaaatttgagtgctgtggctcatttg 435 Query: 461 actgcaggtgctgttggagg-gttgggtgcttctctcattcgtgtccccacagaggtggt 519 |||||||| || ||||||| | || | ||||||| |||||||| |||||||||||||| Sbjct: 436 actgcaggggcaattggaggtgctgcat-cttctcttattcgtgttcccacagaggtggt 494 Query: 520 caaacaaaggatgcaaactggtcaatttaggactgcgcctgatgctgttcg 570 |||||||||||||||| ||||||| | |||||| |||||||||||||| Sbjct: 495 taaacaaaggatgcaaatgagtcaattcaagactgcacctgatgctgttcg 545
>dbj|AK071844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115D04, full insert sequence Length = 1292 Score = 180 bits (91), Expect = 4e-42 Identities = 243/291 (83%), Gaps = 2/291 (0%) Strand = Plus / Plus Query: 281 accaggcttcaggctgctcgagctggaagtcaaattcaatggaaaggcctgtattccgga 340 ||||||||||||||||| || ||||||| ||||||||||||||||| ||||| | || Sbjct: 264 accaggcttcaggctgcgaaaggtggaagtaaaattcaatggaaaggcttgtatgctggg 323 Query: 341 ttaggtggaaatcttgtcggtgttctcccggcttctgctctgtttgtggggatatacgaa 400 |||||||||||| ||| |||||||||||||||||||| | ||| | || | || ||| Sbjct: 324 ttaggtggaaatattgctggtgttctcccggcttctgcaatctttataggagtgtatgaa 383 Query: 401 ccaactaaacggaagctactggacatgtttcctgaaaatttgagtgctgttgctcatctt 460 ||||| ||| | || || || || |||||||||||||||||||||||||| |||||| | Sbjct: 384 ccaaccaaaagaaaactgctagaaatgtttcctgaaaatttgagtgctgtggctcatttg 443 Query: 461 actgcaggtgctgttggagg-gttgggtgcttctctcattcgtgtccccacagaggtggt 519 |||||||| || ||||||| | || | ||||||| |||||||| |||||||||||||| Sbjct: 444 actgcaggggcaattggaggtgctgcat-cttctcttattcgtgttcccacagaggtggt 502 Query: 520 caaacaaaggatgcaaactggtcaatttaggactgcgcctgatgctgttcg 570 |||||||||||||||| ||||||| | |||||| |||||||||||||| Sbjct: 503 taaacaaaggatgcaaatgagtcaattcaagactgcacctgatgctgttcg 553
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 513 aggtggtcaaacaaaggatgcaaactggtcaatttaggactgcgcctgatgctgttcgtc 572 |||| ||||||||||| |||||||| |||||||| ||| |||| |||||||||||||||| Sbjct: 78307 aggttgtcaaacaaagaatgcaaacaggtcaattcaggtctgcacctgatgctgttcgtc 78248 Query: 573 tgatagttgccaaggaaggatttagaggccttt 605 | || |||| || |||||||| ||||| |||| Sbjct: 78247 tcattgttggtaaagaaggattcagaggtcttt 78215 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Minus Query: 291 aggctgctcgagctggaagtcaaattcaatggaaaggcctgtattccggattaggtggaa 350 |||||||||| | ||||||||||||||||||||||| ||||||| ||||||| ||||| Sbjct: 79209 aggctgctcggggaggaagtcaaattcaatggaaaggattgtattctggattagctggaa 79150 Query: 351 atcttgtcggtgttctcccg 370 || ||| |||||||||||| Sbjct: 79149 atattgctggtgttctcccg 79130 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 370 ggcttctgctctgtttgtggggatatacgaaccaactaaacggaagctactggacatgtt 429 |||||||||| | |||||||| ||||||||||| || ||| | || |||||||| | || Sbjct: 78800 ggcttctgctgtatttgtgggaatatacgaaccgacaaaaagaaaactactggagacttt 78741 Query: 430 tcctgaaaatttgagtgctgttgc 453 |||||||||||||||||||||||| Sbjct: 78740 tcctgaaaatttgagtgctgttgc 78717 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 209 gagggcgtcatagccggaggcaccgccggggtcgtggtggagacggcgctctaccccatc 268 |||||||||||||| || |||||||| || || |||||||| || || || ||||| || Sbjct: 79988 gagggcgtcatagctggtggcaccgcgggtgtggtggtggaaacagctctgtacccgatt 79929 Query: 269 gacaccatcaagaccaggcttcagg 293 || || || || ||||||||||||| Sbjct: 79928 gatacgataaaaaccaggcttcagg 79904 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 488 gcttctctcattcgtgtccccacagaggt 516 |||||||||||||| |||||||||||||| Sbjct: 78419 gcttctctcattcgcgtccccacagaggt 78391
>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10, complete sequence Length = 148373 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 513 aggtggtcaaacaaaggatgcaaactggtcaatttaggactgcgcctgatgctgttcgtc 572 |||| ||||||||||| |||||||| |||||||| ||| |||| |||||||||||||||| Sbjct: 127539 aggttgtcaaacaaagaatgcaaacaggtcaattcaggtctgcacctgatgctgttcgtc 127480 Query: 573 tgatagttgccaaggaaggatttagaggccttt 605 | || |||| || |||||||| ||||| |||| Sbjct: 127479 tcattgttggtaaagaaggattcagaggtcttt 127447 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Minus Query: 291 aggctgctcgagctggaagtcaaattcaatggaaaggcctgtattccggattaggtggaa 350 |||||||||| | ||||||||||||||||||||||| ||||||| ||||||| ||||| Sbjct: 128441 aggctgctcggggaggaagtcaaattcaatggaaaggattgtattctggattagctggaa 128382 Query: 351 atcttgtcggtgttctcccg 370 || ||| |||||||||||| Sbjct: 128381 atattgctggtgttctcccg 128362 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 370 ggcttctgctctgtttgtggggatatacgaaccaactaaacggaagctactggacatgtt 429 |||||||||| | |||||||| ||||||||||| || ||| | || |||||||| | || Sbjct: 128032 ggcttctgctgtatttgtgggaatatacgaaccgacaaaaagaaaactactggagacttt 127973 Query: 430 tcctgaaaatttgagtgctgttgc 453 |||||||||||||||||||||||| Sbjct: 127972 tcctgaaaatttgagtgctgttgc 127949 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 209 gagggcgtcatagccggaggcaccgccggggtcgtggtggagacggcgctctaccccatc 268 |||||||||||||| || |||||||| || || |||||||| || || || ||||| || Sbjct: 129220 gagggcgtcatagctggtggcaccgcgggtgtggtggtggaaacagctctgtacccgatt 129161 Query: 269 gacaccatcaagaccaggcttcagg 293 || || || || ||||||||||||| Sbjct: 129160 gatacgataaaaaccaggcttcagg 129136 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 488 gcttctctcattcgtgtccccacagaggt 516 |||||||||||||| |||||||||||||| Sbjct: 127651 gcttctctcattcgcgtccccacagaggt 127623
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 513 aggtggtcaaacaaaggatgcaaactggtcaatttaggactgcgcctgatgctgttcgtc 572 |||| ||||||||||| |||||||| |||||||| ||| |||| |||||||||||||||| Sbjct: 17134172 aggttgtcaaacaaagaatgcaaacaggtcaattcaggtctgcacctgatgctgttcgtc 17134113 Query: 573 tgatagttgccaaggaaggatttagaggccttt 605 | || |||| || |||||||| ||||| |||| Sbjct: 17134112 tcattgttggtaaagaaggattcagaggtcttt 17134080 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Minus Query: 291 aggctgctcgagctggaagtcaaattcaatggaaaggcctgtattccggattaggtggaa 350 |||||||||| | ||||||||||||||||||||||| ||||||| ||||||| ||||| Sbjct: 17135074 aggctgctcggggaggaagtcaaattcaatggaaaggattgtattctggattagctggaa 17135015 Query: 351 atcttgtcggtgttctcccg 370 || ||| |||||||||||| Sbjct: 17135014 atattgctggtgttctcccg 17134995 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 370 ggcttctgctctgtttgtggggatatacgaaccaactaaacggaagctactggacatgtt 429 |||||||||| | |||||||| ||||||||||| || ||| | || |||||||| | || Sbjct: 17134665 ggcttctgctgtatttgtgggaatatacgaaccgacaaaaagaaaactactggagacttt 17134606 Query: 430 tcctgaaaatttgagtgctgttgc 453 |||||||||||||||||||||||| Sbjct: 17134605 tcctgaaaatttgagtgctgttgc 17134582 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/85 (82%) Strand = Plus / Minus Query: 209 gagggcgtcatagccggaggcaccgccggggtcgtggtggagacggcgctctaccccatc 268 |||||||||||||| || |||||||| || || |||||||| || || || ||||| || Sbjct: 17135853 gagggcgtcatagctggtggcaccgcgggtgtggtggtggaaacagctctgtacccgatt 17135794 Query: 269 gacaccatcaagaccaggcttcagg 293 || || || || ||||||||||||| Sbjct: 17135793 gatacgataaaaaccaggcttcagg 17135769 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 488 gcttctctcattcgtgtccccacagaggt 516 |||||||||||||| |||||||||||||| Sbjct: 17134284 gcttctctcattcgcgtccccacagaggt 17134256
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 304 tggaagtcaaattcaatggaaaggcctgtattccggattaggtggaaatcttgtcggtgt 363 ||||||| ||||||||||||||||| ||||| | || |||||||||||| ||| ||||| Sbjct: 11540796 tggaagtaaaattcaatggaaaggcttgtatgctgggttaggtggaaatattgctggtgt 11540737 Query: 364 tctcccg 370 ||||||| Sbjct: 11540736 tctcccg 11540730 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 513 aggtggtcaaacaaaggatgcaaactggtcaatttaggactgcgcctgatgctgttcg 570 ||||||| |||||||||||||||| ||||||| | |||||| |||||||||||||| Sbjct: 11540054 aggtggttaaacaaaggatgcaaatgagtcaattcaagactgcacctgatgctgttcg 11539997 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 425 atgtttcctgaaaatttgagtgctgttgctcat 457 |||||||||||||||||||||||||| |||||| Sbjct: 11540349 atgtttcctgaaaatttgagtgctgtggctcat 11540317 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 489 cttctctcattcgtgtccccacagaggt 516 ||||||| |||||||| ||||||||||| Sbjct: 11540152 cttctcttattcgtgttcccacagaggt 11540125
>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1120F06 Length = 186712 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 304 tggaagtcaaattcaatggaaaggcctgtattccggattaggtggaaatcttgtcggtgt 363 ||||||| ||||||||||||||||| ||||| | || |||||||||||| ||| ||||| Sbjct: 104454 tggaagtaaaattcaatggaaaggcttgtatgctgggttaggtggaaatattgctggtgt 104395 Query: 364 tctcccg 370 ||||||| Sbjct: 104394 tctcccg 104388 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 513 aggtggtcaaacaaaggatgcaaactggtcaatttaggactgcgcctgatgctgttcg 570 ||||||| |||||||||||||||| ||||||| | |||||| |||||||||||||| Sbjct: 103712 aggtggttaaacaaaggatgcaaatgagtcaattcaagactgcacctgatgctgttcg 103655 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 425 atgtttcctgaaaatttgagtgctgttgctcat 457 |||||||||||||||||||||||||| |||||| Sbjct: 104007 atgtttcctgaaaatttgagtgctgtggctcat 103975 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 489 cttctctcattcgtgtccccacagaggt 516 ||||||| |||||||| ||||||||||| Sbjct: 103810 cttctcttattcgtgttcccacagaggt 103783
>gb|AC158737.14| Medicago truncatula clone mth2-154f20, complete sequence Length = 114538 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 425 atgtttcctgaaaatttgagtgctgttgctcat 457 ||||||||||||||| |||||||| |||||||| Sbjct: 50583 atgtttcctgaaaatctgagtgcttttgctcat 50615
>ref|NM_103129.1| Arabidopsis thaliana binding AT1G34065 mRNA, complete cds Length = 984 Score = 44.1 bits (22), Expect = 0.53 Identities = 61/74 (82%) Strand = Plus / Plus Query: 344 ggtggaaatcttgtcggtgttctcccggcttctgctctgtttgtggggatatacgaacca 403 |||||||||||||||||||| | || ||||| ||||| ||| | || |||| |||||| Sbjct: 319 ggtggaaatcttgtcggtgtcttacctgcttcggctctattttttggtgtatatgaacca 378 Query: 404 actaaacggaagct 417 || |||| |||||| Sbjct: 379 accaaacagaagct 392
>gb|BC074600.1| Xenopus tropicalis MGC69323 protein, mRNA (cDNA clone MGC:69323 IMAGE:5308847), complete cds Length = 1342 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 267 tcgacaccatcaagaccaggct 288 |||||||||||||||||||||| Sbjct: 191 tcgacaccatcaagaccaggct 212
>gb|BT022098.1| Arabidopsis thaliana At1g34065 mRNA, complete cds Length = 1313 Score = 44.1 bits (22), Expect = 0.53 Identities = 61/74 (82%) Strand = Plus / Plus Query: 344 ggtggaaatcttgtcggtgttctcccggcttctgctctgtttgtggggatatacgaacca 403 |||||||||||||||||||| | || ||||| ||||| ||| | || |||| |||||| Sbjct: 378 ggtggaaatcttgtcggtgtcttacctgcttcggctctattttttggtgtatatgaacca 437 Query: 404 actaaacggaagct 417 || |||| |||||| Sbjct: 438 accaaacagaagct 451
>ref|NM_001004820.1| Xenopus tropicalis MGC69323 protein (MGC69323), mRNA Length = 1342 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 267 tcgacaccatcaagaccaggct 288 |||||||||||||||||||||| Sbjct: 191 tcgacaccatcaagaccaggct 212
>gb|AC101277.16| Mus musculus chromosome 1, clone RP23-101P2, complete sequence Length = 207021 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ctcaagcttccttcctttacc 102 ||||||||||||||||||||| Sbjct: 109984 ctcaagcttccttcctttacc 109964
>gb|AC124520.4| Mus musculus BAC clone RP23-395G14 from chromosome 7, complete sequence Length = 205352 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 477 gagggttgggtgcttctctca 497 ||||||||||||||||||||| Sbjct: 79567 gagggttgggtgcttctctca 79547
>ref|XM_791622.1| PREDICTED: Strongylocentrotus purpuratus similar to solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26 (LOC592081), mRNA Length = 840 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 261 accccatcgacaccatcaagaccag 285 ||||||||||||||||||| ||||| Sbjct: 80 accccatcgacaccatcaaaaccag 104
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 564 ctgttcgtctgatagttgccaagga 588 ||||| ||||||||||||||||||| Sbjct: 77973 ctgttggtctgatagttgccaagga 77949
>gb|AY007564.1| Saccharopolyspora spinosa probable lysR-type transcriptional regulator, probable keto acyl reductase, spinosad biosynthetic gene cluster, complete sequence, and probable exodeoxyribonuclease V genes, complete cds; and unknown gene Length = 80161 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 cgccggggtcgtggtggagac 252 ||||||||||||||||||||| Sbjct: 33313 cgccggggtcgtggtggagac 33333
>ref|NM_210712.1| Eremothecium gossypii AFL192Cp (AFL192C), mRNA Length = 1407 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 564 ctgttcgtctgatagttgccaagga 588 ||||| ||||||||||||||||||| Sbjct: 833 ctgttggtctgatagttgccaagga 857
>dbj|AP002801.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-875G18, complete sequence Length = 218651 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 ttcaatttcctccagatcctc 205 ||||||||||||||||||||| Sbjct: 191978 ttcaatttcctccagatcctc 191958
>gb|AY260760.3| Streptomyces hygroscopicus subsp. yingchengensis Shy1 (shy1), CvhE (cvhE), CvhD (cvhD), CvhC (cvhC), CvhB (cvhB), CvhA (cvhA), Shy26 (shy26), Shy4 (shy4), Shy5 (shy5), Shy6 (shy6), Shy7 (shy7), Shy8 (shy8), Shy9 (shy9), Shy10 (shy10), Shy11 (shy11), Shy12 (shy12), Shy13 (shy13), Shy14 (shy14), Shy15 (shy15), Shy16 (shy16), Shy17 (shy17), Shy18 (shy18), Hmr19 (hmr19), Shy20 (shy20), Shy21 (shy21), Shy22 (shy22), Shy23 (shy23), Shy24 (shy24), and Shy25 (shy25) genes, complete cds Length = 36687 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 cagcagagcggtcagctgcgg 81 ||||||||||||||||||||| Sbjct: 33220 cagcagagcggtcagctgcgg 33240
>gb|U75345.1|CRU75345 Chlamydomonas reinhardtii envelope protein (LIP-36G1) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2025 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 262 ccccatcgacaccatcaagaccaggcttcaggc 294 ||||||||||||||||||| ||| ||| ||||| Sbjct: 956 ccccatcgacaccatcaagtccaagctgcaggc 988
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gccggggtcgtggtggagac 252 |||||||||||||||||||| Sbjct: 2858853 gccggggtcgtggtggagac 2858834
>ref|XM_675652.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7475.2), mRNA Length = 2382 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 tctcccggcttctgctctgt 383 |||||||||||||||||||| Sbjct: 938 tctcccggcttctgctctgt 919
>gb|AC141880.3| Mus musculus BAC clone RP24-220N1 from chromosome 15, complete sequence Length = 185646 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gcttccttcctttaccctcc 106 |||||||||||||||||||| Sbjct: 144157 gcttccttcctttaccctcc 144176
>emb|CT009509.7| Mouse DNA sequence from clone RP23-140C10 on chromosome 13, complete sequence Length = 218144 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 582 ccaaggaaggatttagaggccttt 605 ||||||||||| |||||||||||| Sbjct: 151607 ccaaggaaggagttagaggccttt 151584
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gccggggtcgtggtggagac 252 |||||||||||||||||||| Sbjct: 12662 gccggggtcgtggtggagac 12643
>ref|XM_750937.1| Aspergillus fumigatus Af293 succinate:fumarate antiporter Acr1 (Afu2g16930) partial mRNA Length = 1041 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 ccccatcgacaccatcaagaccag 285 |||||| ||||||||||||||||| Sbjct: 789 ccccattgacaccatcaagaccag 812
>gb|AC122919.3| Mus musculus BAC clone RP23-30C12 from 10, complete sequence Length = 221920 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 attcaatggaaaggcctgta 333 |||||||||||||||||||| Sbjct: 198192 attcaatggaaaggcctgta 198211
>emb|AL157935.28| Human DNA sequence from clone RP11-203J24 on chromosome 9 Contains the 5' end of the ENG gene for endoglin (Osler-Rendu-Weber syndrome 1) (END, ORW, HHT1, ORW1, CD105), the AK1 gene for adenylate kinase 1, the ST6GALNAC6 gene for CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VI (ST6GALNACVI), the SIAT7D gene for sialyltransferase 7D ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1, 3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) (SIAT3C, ST6GALNAC4, ST6GALNACIV), the DPM2 gene for dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit (MGC21559), the gene for a novel protien containing FLJ00179, a novel gene and ten CpG islands, complete sequence Length = 164201 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 aggtggtcaaacaaaggatg 532 |||||||||||||||||||| Sbjct: 21617 aggtggtcaaacaaaggatg 21598
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gccggggtcgtggtggagac 252 |||||||||||||||||||| Sbjct: 90329 gccggggtcgtggtggagac 90310
>gb|AC063968.5| Genomic sequence for Mus musculus, clone RP23-105K11, complete sequence Length = 222520 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 attcaatggaaaggcctgta 333 |||||||||||||||||||| Sbjct: 190665 attcaatggaaaggcctgta 190684
>gb|AC090213.6| Homo sapiens chromosome 18, clone RP11-760L24, complete sequence Length = 170907 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ttcctgaaaatttgagtgct 448 |||||||||||||||||||| Sbjct: 43581 ttcctgaaaatttgagtgct 43562
>ref|XM_681794.1| PREDICTED: Danio rerio similar to abhydrolase domain containing 8 (LOC558563), partial mRNA Length = 1289 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 cagatcctctgcgagggcgt 216 |||||||||||||||||||| Sbjct: 683 cagatcctctgcgagggcgt 664
>gb|AC010776.10| Homo sapiens chromosome 18, clone RP11-2N1, complete sequence Length = 181252 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ttcctgaaaatttgagtgct 448 |||||||||||||||||||| Sbjct: 122015 ttcctgaaaatttgagtgct 121996
>dbj|AK221884.1| Arabidopsis thaliana mRNA for allinase like protein, complete cds, clone: RAFL22-21-K06 Length = 1528 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ggtggaaatcttgtcggtgt 363 |||||||||||||||||||| Sbjct: 368 ggtggaaatcttgtcggtgt 387
>emb|BX813427.1|CNS0ADFU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZH07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1154 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ggtggaaatcttgtcggtgt 363 |||||||||||||||||||| Sbjct: 291 ggtggaaatcttgtcggtgt 310
>gb|AC151901.3| Mus musculus BAC clone RP23-271E15 from chromosome 10, complete sequence Length = 182748 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 attcaatggaaaggcctgta 333 |||||||||||||||||||| Sbjct: 55572 attcaatggaaaggcctgta 55591
>gb|AC015446.4|AC015446 Arabidopsis thaliana chromosome I BAC F12G12 genomic sequence, complete sequence Length = 125632 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ggtggaaatcttgtcggtgt 363 |||||||||||||||||||| Sbjct: 57164 ggtggaaatcttgtcggtgt 57183
>gb|AC157495.2| Gallus gallus BAC clone CH261-13P20 from chromosome unknown, complete sequence Length = 228855 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 agaccaggcttcaggctgct 298 |||||||||||||||||||| Sbjct: 102852 agaccaggcttcaggctgct 102871
>emb|AM167668.1| Trichostrongylus tenuis microsatellite DNA, clone Tte111 Length = 308 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ttcctgaaaatttgagtgct 448 |||||||||||||||||||| Sbjct: 137 ttcctgaaaatttgagtgct 118 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,342,339 Number of Sequences: 3902068 Number of extensions: 5342339 Number of successful extensions: 87219 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87011 Number of HSP's gapped (non-prelim): 203 length of query: 607 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 584 effective length of database: 17,143,297,704 effective search space: 10011685859136 effective search space used: 10011685859136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)