ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd26a20 |
|---|---|
| Clone Library Name | barley_pub |
>DGAT1_HUMAN (O75907) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)| (Diglyceride acyltransferase) (ACAT-related gene product 1) Length = 488 Score = 117 bits (292), Expect = 4e-26 Identities = 72/215 (33%), Positives = 115/215 (53%), Gaps = 8/215 (3%) Frame = +1 Query: 1 GLFNLCIVVLVAVNGRLIIENLMKYGLLIRTGFWFNSRSLRD---WPLLMCCLSLPAFPL 171 G+ N C+V+L+ N RL +ENL+KYG+L+ S L+D WP ++ F + Sbjct: 87 GILNWCVVMLILSNARLFLENLIKYGILVDP-IQVVSLFLKDPYSWPAPCLVIAANVFAV 145 Query: 172 GAFSVEKLAFRNVITDAVATCLHIILTTTEIVYPVLVILMCDSAVVSGFLLMFIA-CIVW 348 AF VEK +T+ LH+ T + +P V+L+ +S G LL +A I++ Sbjct: 146 AAFQVEKRLAVGALTEQAGLLLHVANLATILCFPAAVVLLVESITPVGSLLALMAHTILF 205 Query: 349 LKLVSFAHTNHDIRQLTI----SGKKVDYAPSTDDMDNLQAPTLGSLVYFMMAPTLCYQP 516 LKL S+ N R+ +GKK A + + T L YF+ APTLCY+ Sbjct: 206 LKLFSYRDVNSWCRRARAKAASAGKKASSAAAPHTVSYPDNLTYRDLYYFLFAPTLCYEL 265 Query: 517 SYPRTANVRKGWLIRQIILYLIFTGIQGFIIEQYI 621 ++PR+ +RK +L+R+I+ L FT +Q +I+Q++ Sbjct: 266 NFPRSPRIRKRFLLRRILEMLFFTQLQVGLIQQWM 300
>DGAT1_CERAE (Q9GMF1) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)| (Diglyceride acyltransferase) Length = 491 Score = 114 bits (286), Expect = 2e-25 Identities = 70/215 (32%), Positives = 115/215 (53%), Gaps = 8/215 (3%) Frame = +1 Query: 1 GLFNLCIVVLVAVNGRLIIENLMKYGLLIRTGFWFNSRSLRD---WPLLMCCLSLPAFPL 171 G+ N C+V+L+ N RL +ENL+KYG+L+ S L+D WP ++ F + Sbjct: 90 GILNWCVVMLILSNARLFLENLIKYGILVDP-IQVVSLFLKDPYSWPAPCLVIAANVFAV 148 Query: 172 GAFSVEKLAFRNVITDAVATCLHIILTTTEIVYPVLVILMCDSAVVSGFLL-MFIACIVW 348 AF VEK +T+ LH+ T + +P V+L+ +S G LL + + I++ Sbjct: 149 AAFQVEKRLAVGALTEQAGLLLHVANLATILCFPAAVVLLVESITPVGSLLALMVHTILF 208 Query: 349 LKLVSFAHTNHDIRQLTI----SGKKVDYAPSTDDMDNLQAPTLGSLVYFMMAPTLCYQP 516 LKL S+ N R+ +GK+ A + + T L YF+ APTLCY+ Sbjct: 209 LKLFSYRDVNLWCRRARAKAASAGKRASSAAAPHTVSYPDNLTYRDLYYFLFAPTLCYEL 268 Query: 517 SYPRTANVRKGWLIRQIILYLIFTGIQGFIIEQYI 621 ++PR+ +RK +L+R+I+ L FT +Q +I+Q++ Sbjct: 269 NFPRSPRIRKRFLLRRILEMLFFTQLQVGLIQQWM 303
>DGAT1_MOUSE (Q9Z2A7) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)| (Diglyceride acyltransferase) Length = 498 Score = 113 bits (283), Expect = 4e-25 Identities = 70/217 (32%), Positives = 116/217 (53%), Gaps = 10/217 (4%) Frame = +1 Query: 1 GLFNLCIVVLVAVNGRLIIENLMKYGLLIRTGFWFNSRSLRD---WPLLMCCLSLPAFPL 171 G+ N C+V+L+ N RL +ENL+KYG+L+ S L+D WP ++ F + Sbjct: 96 GILNWCVVMLILSNARLFLENLIKYGILVDP-IQVVSLFLKDPYSWPAPCVIIASNIFVV 154 Query: 172 GAFSVEKLAFRNVITDAVATCLHIILTTTEIVYPVLVILMCDSAVVSGFLLMFIA-CIVW 348 AF +EK +T+ + LH++ T I +P V L+ +S G + + I++ Sbjct: 155 AAFQIEKRLAVGALTEQMGLLLHVVNLATIICFPAAVALLVESITPVGSVFALASYSIMF 214 Query: 349 LKLVSFAHTNHDIRQLTI------SGKKVDYAPSTDDMDNLQAPTLGSLVYFMMAPTLCY 510 LKL S+ N RQ + +GKKV A + + T L YF+ APTLCY Sbjct: 215 LKLYSYRDVNLWCRQRRVKAKAVSTGKKVSGAAAQQAVSYPDNLTYRDLYYFIFAPTLCY 274 Query: 511 QPSYPRTANVRKGWLIRQIILYLIFTGIQGFIIEQYI 621 + ++PR+ +RK +L+R+++ L FT +Q +I+Q++ Sbjct: 275 ELNFPRSPRIRKRFLLRRVLEMLFFTQLQVGLIQQWM 311
>DGAT1_RAT (Q9ERM3) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)| (Diglyceride acyltransferase) Length = 498 Score = 113 bits (282), Expect = 5e-25 Identities = 70/217 (32%), Positives = 116/217 (53%), Gaps = 10/217 (4%) Frame = +1 Query: 1 GLFNLCIVVLVAVNGRLIIENLMKYGLLIRTGFWFNSRSLRD---WPLLMCCLSLPAFPL 171 G+ N C+V+L+ N RL +ENL+KYG+L+ S L+D WP ++ F + Sbjct: 96 GILNWCVVMLILSNARLSLENLIKYGILVDP-IQVVSLFLKDPYSWPAPCLIIASNIFIV 154 Query: 172 GAFSVEKLAFRNVITDAVATCLHIILTTTEIVYPVLVILMCDSAVVSGFLLMFIA-CIVW 348 F +EK +T+ + LH++ T I +P V L+ +S G L + I++ Sbjct: 155 ATFQIEKRLSVGALTEQMGLLLHVVNLATIICFPAAVALLVESITPVGSLFALASYSIIF 214 Query: 349 LKLVSFAHTNHDIRQLTI------SGKKVDYAPSTDDMDNLQAPTLGSLVYFMMAPTLCY 510 LKL S+ N RQ + +GKKV A + + + T L YF+ APTLCY Sbjct: 215 LKLSSYRDVNLWCRQRRVKAKAVSAGKKVSGAAAQNTVSYPDNLTYRDLYYFIFAPTLCY 274 Query: 511 QPSYPRTANVRKGWLIRQIILYLIFTGIQGFIIEQYI 621 + ++PR+ +RK +L+R+++ L FT +Q +I+Q++ Sbjct: 275 ELNFPRSPRIRKRFLLRRVLEMLFFTQLQVGLIQQWM 311
>SOAT1_MOUSE (Q61263) Sterol O-acyltransferase 1 (EC 2.3.1.26) (Cholesterol| acyltransferase 1) (Acyl coenzyme A:cholesterol acyltransferase 1) (ACAT-1) Length = 540 Score = 48.5 bits (114), Expect = 2e-05 Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 5/194 (2%) Frame = +1 Query: 4 LFNLCIVVLVAVN-GRLIIE-NLMKYGL-LIRTGFWFNSRSLRDWPLLMCCLSLPAFPLG 174 LF L +V+ ++ GRL++E NL+ Y T W W + + LS+P F Sbjct: 141 LFVLSTIVVDYIDEGRLVLEFNLLAYAFGKFPTVIW------TWWAMFLSTLSIPYFLFQ 194 Query: 175 AFSVE-KLAFRNVITDAVATCLHIILTTTEIVY-PVLVILMCDSAVVSGFLLMFIACIVW 348 ++ + +I V L ++ + + P V+L S F+L+ + Sbjct: 195 PWAHGYSKSSHPLIYSLVHGLLFLVFQLGVLGFVPTYVVLAYTLPPASRFILILEQIRLI 254 Query: 349 LKLVSFAHTNHDIRQLTISGKKVDYAPSTDDMDNLQAPTLGSLVYFMMAPTLCYQPSYPR 528 +K SF N R L + +K P PT+ +YF+ APTL Y+ +YPR Sbjct: 255 MKAHSFVRENIP-RVLNAAKEKSSKDP---------LPTVNQYLYFLFAPTLIYRDNYPR 304 Query: 529 TANVRKGWLIRQII 570 T VR G++ Q + Sbjct: 305 TPTVRWGYVAMQFL 318
>SOAT1_CRIGR (Q60457) Sterol O-acyltransferase 1 (EC 2.3.1.26) (Cholesterol| acyltransferase 1) (Acyl coenzyme A:cholesterol acyltransferase 1) (ACAT-1) Length = 546 Score = 47.8 bits (112), Expect = 3e-05 Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 5/194 (2%) Frame = +1 Query: 4 LFNLCIVVLVAVN-GRLIIE-NLMKYGL-LIRTGFWFNSRSLRDWPLLMCCLSLPAFPLG 174 LF L +V+ ++ GRL++E NL+ Y + T W W + + LS+P F Sbjct: 147 LFILSTLVVDYIDEGRLVLEFNLLGYAFGKLPTVIW------TWWAMFLSTLSIPYFLFQ 200 Query: 175 AFSVEKLAFRNVITDAVATCLHIILTTTEIV--YPVLVILMCDSAVVSGFLLMFIACIVW 348 ++ + + +++ ++ I+ P V+L S F+++ + Sbjct: 201 RWAHGYSKTSHPLIYSLSHGFFFLVFQLGILGFVPTYVVLAYTLPPASRFIVILEQIRMV 260 Query: 349 LKLVSFAHTNHDIRQLTISGKKVDYAPSTDDMDNLQAPTLGSLVYFMMAPTLCYQPSYPR 528 +K SF N R L + +K P PT+ +YF+ APTL Y+ SYPR Sbjct: 261 MKAHSFVRENVP-RVLNAAKEKSSTVP---------VPTVNQYLYFLFAPTLIYRDSYPR 310 Query: 529 TANVRKGWLIRQII 570 T VR G++ Q + Sbjct: 311 TPTVRWGYVAVQFL 324
>SOAT1_RAT (O70536) Sterol O-acyltransferase 1 (EC 2.3.1.26) (Cholesterol| acyltransferase 1) (Acyl coenzyme A:cholesterol acyltransferase 1) (ACAT-1) Length = 545 Score = 46.2 bits (108), Expect = 8e-05 Identities = 31/100 (31%), Positives = 47/100 (47%) Frame = +1 Query: 271 PVLVILMCDSAVVSGFLLMFIACIVWLKLVSFAHTNHDIRQLTISGKKVDYAPSTDDMDN 450 P V+L S F+L+ + +K S+ N R L+ + +K P Sbjct: 234 PTYVVLAYTLPPASRFILILEQIRLVMKAHSYVRENVP-RVLSAAKEKSSTVP------- 285 Query: 451 LQAPTLGSLVYFMMAPTLCYQPSYPRTANVRKGWLIRQII 570 PT+ +YF+ APTL Y+ SYPRT VR G++ Q + Sbjct: 286 --VPTVNQYLYFLFAPTLIYRDSYPRTPTVRWGYVAMQFL 323
>SOAT1_MACFA (O77761) Sterol O-acyltransferase 1 (EC 2.3.1.26) (Cholesterol| acyltransferase 1) (Acyl coenzyme A:cholesterol acyltransferase 1) (ACAT-1) Length = 550 Score = 44.3 bits (103), Expect = 3e-04 Identities = 31/98 (31%), Positives = 44/98 (44%) Frame = +1 Query: 271 PVLVILMCDSAVVSGFLLMFIACIVWLKLVSFAHTNHDIRQLTISGKKVDYAPSTDDMDN 450 P V+L S F+++F +K SF N R L + +K P Sbjct: 239 PTYVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENVP-RVLNSAKEKSSTVP------- 290 Query: 451 LQAPTLGSLVYFMMAPTLCYQPSYPRTANVRKGWLIRQ 564 PT+ +YF+ APTL Y+ SYPR VR G++ Q Sbjct: 291 --IPTVNQYLYFLFAPTLIYRDSYPRNPTVRWGYVAMQ 326
>SOAT1_CERAE (O77760) Sterol O-acyltransferase 1 (EC 2.3.1.26) (Cholesterol| acyltransferase 1) (Acyl coenzyme A:cholesterol acyltransferase 1) (ACAT-1) Length = 550 Score = 44.3 bits (103), Expect = 3e-04 Identities = 31/98 (31%), Positives = 44/98 (44%) Frame = +1 Query: 271 PVLVILMCDSAVVSGFLLMFIACIVWLKLVSFAHTNHDIRQLTISGKKVDYAPSTDDMDN 450 P V+L S F+++F +K SF N R L + +K P Sbjct: 239 PTYVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENVP-RVLNSAKEKSSTVP------- 290 Query: 451 LQAPTLGSLVYFMMAPTLCYQPSYPRTANVRKGWLIRQ 564 PT+ +YF+ APTL Y+ SYPR VR G++ Q Sbjct: 291 --IPTVNQYLYFLFAPTLIYRDSYPRNPTVRWGYVAMQ 326
>SOAT1_HUMAN (P35610) Sterol O-acyltransferase 1 (EC 2.3.1.26) (Cholesterol| acyltransferase 1) (Acyl coenzyme A:cholesterol acyltransferase 1) (ACAT-1) Length = 550 Score = 43.1 bits (100), Expect = 7e-04 Identities = 30/95 (31%), Positives = 43/95 (45%) Frame = +1 Query: 271 PVLVILMCDSAVVSGFLLMFIACIVWLKLVSFAHTNHDIRQLTISGKKVDYAPSTDDMDN 450 P V+L S F+++F +K SF N R L + +K P Sbjct: 239 PTYVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENVP-RVLNSAKEKSSTVP------- 290 Query: 451 LQAPTLGSLVYFMMAPTLCYQPSYPRTANVRKGWL 555 PT+ +YF+ APTL Y+ SYPR VR G++ Sbjct: 291 --IPTVNQYLYFLFAPTLIYRDSYPRNPTVRWGYV 323
>SOAT2_HUMAN (O75908) Sterol O-acyltransferase 2 (EC 2.3.1.26) (Cholesterol| acyltransferase 2) (Acyl coenzyme A:cholesterol acyltransferase 2) (ACAT-2) Length = 522 Score = 41.2 bits (95), Expect = 0.003 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 6/53 (11%) Frame = +1 Query: 445 DNLQAPTLGSLVYFMMAPTLCYQPSYPRTANVRKGWLIRQI------ILYLIF 585 + +QAP+ S +YF+ PTL Y+ +YPRT VR ++ + +LY F Sbjct: 261 EGIQAPSFSSYLYFLFCPTLIYRETYPRTPYVRWNYVAKNFAQALGCVLYACF 313
>SOAT2_CERAE (O77759) Sterol O-acyltransferase 2 (EC 2.3.1.26) (Cholesterol| acyltransferase 2) (Acyl coenzyme A:cholesterol acyltransferase 2) (ACAT-2) Length = 526 Score = 40.8 bits (94), Expect = 0.003 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 6/53 (11%) Frame = +1 Query: 445 DNLQAPTLGSLVYFMMAPTLCYQPSYPRTANVRKGWLIRQI------ILYLIF 585 + +QAP+ S +YF+ PTL Y+ +YPRT +R ++ + +LY F Sbjct: 265 EGIQAPSFSSYLYFLFCPTLIYRETYPRTPYIRWNYVAKNFAQALGCVLYACF 317
>SOAT2_MOUSE (O88908) Sterol O-acyltransferase 2 (EC 2.3.1.26) (Cholesterol| acyltransferase 2) (Acyl coenzyme A:cholesterol acyltransferase 2) (ACAT-2) Length = 525 Score = 37.0 bits (84), Expect = 0.048 Identities = 13/37 (35%), Positives = 24/37 (64%) Frame = +1 Query: 451 LQAPTLGSLVYFMMAPTLCYQPSYPRTANVRKGWLIR 561 + P+ S +YF+ PTL Y+ +YPRT ++R ++ + Sbjct: 266 ISPPSFSSYLYFLFCPTLIYRETYPRTPSIRWNYVAK 302
>ARE2_YEAST (P53629) Sterol O-acyltransferase 2 (EC 2.3.1.26) (Sterol-ester| synthase 2) Length = 642 Score = 33.5 bits (75), Expect = 0.53 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +1 Query: 472 SLVYFMMAPTLCYQPSYPRTANVRKGWLIRQI 567 S +F M PTL YQ YPRT +R +++ +I Sbjct: 408 SFFWFTMFPTLIYQIEYPRTKEIRWSYVLEKI 439
>POLG_HCVBK (P26663) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3009 Score = 30.8 bits (68), Expect = 3.4 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +1 Query: 1 GLFNLCIVVLVAVNGRLIIENLMKYGLLIRTGFWFNSRSLRDWP 132 GL + C++V G + MK G L T + + LRDWP Sbjct: 916 GLIHACMLVRKVAGGHYVQMAFMKLGALTGTYIYNHLTPLRDWP 959
>SRD48_CAEEL (O17822) Serpentine receptor class delta-48 (Protein srd-48)| Length = 316 Score = 30.4 bits (67), Expect = 4.5 Identities = 12/28 (42%), Positives = 22/28 (78%) Frame = +2 Query: 188 KSWRSVMLLLMLWLPVFISFLQQLKLYI 271 +++R V+++LML LP+FI+ + Q+ L I Sbjct: 122 QNYRKVVIILMLLLPIFITMVAQIDLMI 149
>ARE2_SACBA (Q876L2) Sterol O-acyltransferase 2 (EC 2.3.1.26) (Sterol-ester| synthase 2) Length = 650 Score = 30.4 bits (67), Expect = 4.5 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +1 Query: 484 FMMAPTLCYQPSYPRTANVRKGWLIRQI 567 F M PTL YQ YPRT +R +++ +I Sbjct: 420 FTMFPTLIYQIEYPRTKEIRWVYVLEKI 447
>NAH_SCHPO (P36606) Na(+)/H(+) antiporter| Length = 468 Score = 29.6 bits (65), Expect = 7.6 Identities = 16/63 (25%), Positives = 32/63 (50%) Frame = +1 Query: 175 AFSVEKLAFRNVITDAVATCLHIILTTTEIVYPVLVILMCDSAVVSGFLLMFIACIVWLK 354 AF + L + I ++ + T EI++P++ ++ S +V GF + + ++W K Sbjct: 379 AFLAKLLLSPDEIEKSIYESTTVFSTLNEIIWPIISFVILSSIIVHGFSIHVL--VIWGK 436 Query: 355 LVS 363 L S Sbjct: 437 LKS 439
>XKR7_PANTR (Q49LS1) XK-related protein 7| Length = 579 Score = 29.6 bits (65), Expect = 7.6 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%) Frame = +1 Query: 91 TGFWFNSRSLRD--WPLLMCCLSLPAFPLGAF 180 TGFW++SR+ + L+M C+ +F LG F Sbjct: 399 TGFWYSSRNFSTDFYSLIMVCVVASSFALGIF 430
>XKR7_HUMAN (Q5GH72) XK-related protein 7| Length = 579 Score = 29.6 bits (65), Expect = 7.6 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%) Frame = +1 Query: 91 TGFWFNSRSLRD--WPLLMCCLSLPAFPLGAF 180 TGFW++SR+ + L+M C+ +F LG F Sbjct: 399 TGFWYSSRNFSTDFYSLIMVCVVASSFALGIF 430
>FRDD_YERPE (Q8ZIX8) Fumarate reductase subunit D (Fumarate reductase 13 kDa| hydrophobic protein) Length = 118 Score = 29.6 bits (65), Expect = 7.6 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +1 Query: 280 VILMCDSAVVSGFLLMFIACIVWLKLVSFAHTNHDIRQLTISGKKVDY 423 ++ C S + FLL+ I +W L H HD++ +GK V Y Sbjct: 54 ILAFCQSFIGRVFLLLMIILPLWCGLHRIHHAMHDLKIHVPAGKWVFY 101
>OAC_BPSF6 (P23214) O-acetyl transferase (EC 2.3.1.-) (O-antigen acetylase)| Length = 333 Score = 29.3 bits (64), Expect = 10.0 Identities = 27/116 (23%), Positives = 51/116 (43%) Frame = +1 Query: 265 VYPVLVILMCDSAVVSGFLLMFIACIVWLKLVSFAHTNHDIRQLTISGKKVDYAPSTDDM 444 ++P LV ++++ FL +I L S + +HDI + TIS + AP D Sbjct: 77 IFPALV----PCSILTYFLFGWI-----LNDFSAEYFSHDIVRKTISSIFMSQAPDADIT 127 Query: 445 DNLQAPTLGSLVYFMMAPTLCYQPSYPRTANVRKGWLIRQIILYLIFTGIQGFIIE 612 +L + ++ + LCY + A+++ G I+L + + G + E Sbjct: 128 SHLIHAGINGSLWTLPLEFLCYIITGVAVAHLKNGKAFIVILLVFVSLSLIGSVSE 183 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,771,424 Number of Sequences: 219361 Number of extensions: 1648443 Number of successful extensions: 4661 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 4533 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4651 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
