| Clone Name | basd26a17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AP2A_RAT (P58197) Transcription factor AP-2 alpha (AP2-alpha) (A... | 32 | 0.40 | 2 | AP2A_SHEEP (Q9N0N3) Transcription factor AP-2 alpha (AP2-alpha) ... | 32 | 0.40 | 3 | AP2A_MOUSE (P34056) Transcription factor AP-2 alpha (AP2-alpha) ... | 30 | 2.0 | 4 | ZN703_HUMAN (Q9H7S9) Zinc finger protein 703 | 29 | 3.4 | 5 | ENV_SFV3L (P27399) Env polyprotein (Coat polyprotein) | 28 | 4.4 | 6 | ENV_FOAMV (P14351) Env polyprotein (Coat polyprotein) | 28 | 4.4 |
|---|
>AP2A_RAT (P58197) Transcription factor AP-2 alpha (AP2-alpha) (Activating| enhancer-binding protein 2 alpha) (Activator protein 2) (AP-2) Length = 437 Score = 32.0 bits (71), Expect = 0.40 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +1 Query: 223 LDPRRSXRMRXQGTASPHGLGAXXLELPLH 312 LDPRR R PHGLG+ +LP+H Sbjct: 121 LDPRRDYRRHEDLLHGPHGLGSGLGDLPIH 150
>AP2A_SHEEP (Q9N0N3) Transcription factor AP-2 alpha (AP2-alpha) (Activating| enhancer-binding protein 2 alpha) (Activator protein 2) (AP-2) Length = 491 Score = 32.0 bits (71), Expect = 0.40 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +1 Query: 223 LDPRRSXRMRXQGTASPHGLGAXXLELPLH 312 LDPRR R PHGLG+ +LP+H Sbjct: 175 LDPRRDYRRHEDLLHGPHGLGSGLGDLPIH 204
>AP2A_MOUSE (P34056) Transcription factor AP-2 alpha (AP2-alpha) (Activating| enhancer-binding protein 2 alpha) (Activator protein 2) (AP-2) Length = 437 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +1 Query: 223 LDPRRSXRMRXQGTASPHGLGAXXLELPLH 312 LDPRR R PH LG+ +LP+H Sbjct: 121 LDPRRDYRRHEDLLHGPHALGSGLGDLPIH 150
>ZN703_HUMAN (Q9H7S9) Zinc finger protein 703| Length = 590 Score = 28.9 bits (63), Expect = 3.4 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = -1 Query: 95 GVDPTRGGRIEGDLXGGVGLINGE 24 G+DP++ G + G L GG+GL G+ Sbjct: 333 GLDPSKSGLVGGQLSGGLGLPPGK 356
>ENV_SFV3L (P27399) Env polyprotein (Coat polyprotein)| Length = 982 Score = 28.5 bits (62), Expect = 4.4 Identities = 9/19 (47%), Positives = 15/19 (78%) Frame = -3 Query: 237 PAWIQRLSXGSTEMWPEAS 181 PAWIQ+L+ + ++WP A+ Sbjct: 906 PAWIQQLASATRDVWPAAA 924
>ENV_FOAMV (P14351) Env polyprotein (Coat polyprotein)| Length = 985 Score = 28.5 bits (62), Expect = 4.4 Identities = 9/19 (47%), Positives = 15/19 (78%) Frame = -3 Query: 237 PAWIQRLSXGSTEMWPEAS 181 PAWIQ+L+ + ++WP A+ Sbjct: 909 PAWIQQLAAATKDVWPAAA 927 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,931,676 Number of Sequences: 219361 Number of extensions: 378264 Number of successful extensions: 1362 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1201 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1362 length of database: 80,573,946 effective HSP length: 81 effective length of database: 62,805,705 effective search space used: 1507336920 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)