Clone Information

BLAST Search Result

Clone Name	basd26a14
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	YTHD2_HUMAN (Q9Y5A9) YTH domain protein 2 (High-glucose-regulate...	200	3e-51
2	YTHD1_MOUSE (P59326) YTH domain protein 1 (Dermatomyositis assoc...	199	4e-51
3	YTHD3_PONPY (Q5RFL8) YTH domain protein 3	198	1e-50
4	YTHD3_MOUSE (Q8BYK6) YTH domain protein 3	198	1e-50
5	YTHD3_HUMAN (Q7Z739) YTH domain protein 3	198	1e-50
6	YTHD1_HUMAN (Q9BYJ9) YTH domain protein 1 (Dermatomyositis assoc...	197	2e-50
7	YTDC1_RAT (Q9QY02) YTH domain-containing protein 1 (Putative spl...	69	1e-11
8	YTDC1_HUMAN (Q96MU7) YTH domain-containing protein 1 (Putative s...	69	1e-11
9	LPXA_CHLCV (Q820F0) Acyl-[acyl-carrier-protein]--UDP-N-acetylglu...	32	1.8
10	IL4RA_MOUSE (P16382) Interleukin-4 receptor alpha chain precurso...	31	2.4
11	CTNB_URECA (P35224) Beta-catenin	31	3.1
12	Y939_SULTO (Q973G3) Hypothetical protein ST0939 precursor	30	4.0
13	Y926_STRP8 (Q8P1E4) Hypothetical UPF0230 protein spyM18_0926	30	4.0
14	Y865_STRP1 (Q9A0A6) Hypothetical UPF0230 protein SPy0865/M5005_S...	30	4.0
15	Y690_STRP6 (Q5XCN8) Hypothetical UPF0230 protein M6_Spy0690	30	4.0
16	Y655_ARCFU (O29602) Hypothetical protein AF0655	30	5.3
17	Y586_STRP3 (Q8K7W6) Hypothetical UPF0230 protein SpyM3_0586/SPs1267	30	5.3
18	RIBD_CHLTR (O84735) Riboflavin biosynthesis protein ribD [Includ...	30	5.3
19	MAD1_YARLI (Q6C452) Spindle assembly checkpoint component MAD1 (...	30	5.3
20	SYE2_EHRRW (Q5HB98) Glutamyl-tRNA synthetase 2 (EC 6.1.1.17) (Gl...	30	6.9
21	SYE2_EHRRG (Q5FGW4) Glutamyl-tRNA synthetase 2 (EC 6.1.1.17) (Gl...	30	6.9
22	CPXB_BACME (P14779) Bifunctional P-450:NADPH-P450 reductase (Cyt...	29	9.0
23	IME1_YEAST (P21190) Meiosis-inducing protein 1	29	9.0
24	Y441_BUCAI (P57516) Hypothetical UPF0004 protein BU441	29	9.0

>YTHD2_HUMAN (Q9Y5A9) YTH domain protein 2 (High-glucose-regulated protein 8)|
           (NY-REN-2 antigen) (CLL-associated antigen KW-14)
          Length = 579

 Score =  200 bits (508), Expect = 3e-51
 Identities = 96/171 (56%), Positives = 119/171 (69%)
 Frame = +1

Query: 40  FNLEDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKGSSCP 219
           +N +DF       + F+IKSYSEDDIH+SIKYN+W ST +GNK+LDAAY+    KG   P
Sbjct: 398 YNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKG---P 454

Query: 220 IFLFFSVNTSGQFVGVAEMTGPVDFEKTLEYWQQDKWNGSFSVKWHIVKDVPNNILKHIV 399
           ++L FSVN SG F GVAEM   VD+      W QDKW G F V+W  VKDVPN+ L+HI 
Sbjct: 455 VYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIR 514

Query: 400 LENNEGKPVTNSRDTQDINLEQGIQMLKIFKEHVSKTSILEDFTFYENRQK 552
           LENNE KPVTNSRDTQ++ LE+  Q+LKI   +   TSI +DF+ YE RQ+
Sbjct: 515 LENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQE 565

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>YTHD1_MOUSE (P59326) YTH domain protein 1 (Dermatomyositis associated with|
           cancer putative autoantigen 1 homolog) (DACA-1 homolog)
          Length = 559

 Score =  199 bits (507), Expect = 4e-51
 Identities = 94/171 (54%), Positives = 121/171 (70%)
 Frame = +1

Query: 40  FNLEDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKGSSCP 219
           +N ++F       + F+IKSYSEDDIH+SIKY++W ST +GNK+LD A++   +KG   P
Sbjct: 377 YNPKEFDWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSMSSKG---P 433

Query: 220 IFLFFSVNTSGQFVGVAEMTGPVDFEKTLEYWQQDKWNGSFSVKWHIVKDVPNNILKHIV 399
           ++L FSVN SG F GVAEM  PVD+  +   W QDKW G F VKW  VKDVPNN L+HI 
Sbjct: 434 VYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVKWIFVKDVPNNQLRHIR 493

Query: 400 LENNEGKPVTNSRDTQDINLEQGIQMLKIFKEHVSKTSILEDFTFYENRQK 552
           LENN+ KPVTNSRDTQ++ LE+  Q+LKI   +   TSI +DF+ YE RQ+
Sbjct: 494 LENNDNKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQE 544

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>YTHD3_PONPY (Q5RFL8) YTH domain protein 3|
          Length = 585

 Score =  198 bits (503), Expect = 1e-50
 Identities = 96/171 (56%), Positives = 118/171 (69%)
 Frame = +1

Query: 40  FNLEDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKGSSCP 219
           +N +DF     + + F+IKSYSEDDIH+SIKY++W ST +GNK+LDAAY+    KG   P
Sbjct: 404 YNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKG---P 460

Query: 220 IFLFFSVNTSGQFVGVAEMTGPVDFEKTLEYWQQDKWNGSFSVKWHIVKDVPNNILKHIV 399
           ++L FSVN SG F GVAEM   VD+      W QDKW G F VKW  VKDVPNN L+HI 
Sbjct: 461 LYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIR 520

Query: 400 LENNEGKPVTNSRDTQDINLEQGIQMLKIFKEHVSKTSILEDFTFYENRQK 552
           LENN+ KPVTNSRDTQ++ LE+  Q+LKI       TSI +DF  YE RQ+
Sbjct: 521 LENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQE 571

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>YTHD3_MOUSE (Q8BYK6) YTH domain protein 3|
          Length = 585

 Score =  198 bits (503), Expect = 1e-50
 Identities = 96/171 (56%), Positives = 118/171 (69%)
 Frame = +1

Query: 40  FNLEDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKGSSCP 219
           +N +DF     + + F+IKSYSEDDIH+SIKY++W ST +GNK+LDAAY+    KG   P
Sbjct: 404 YNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKG---P 460

Query: 220 IFLFFSVNTSGQFVGVAEMTGPVDFEKTLEYWQQDKWNGSFSVKWHIVKDVPNNILKHIV 399
           ++L FSVN SG F GVAEM   VD+      W QDKW G F VKW  VKDVPNN L+HI 
Sbjct: 461 LYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIR 520

Query: 400 LENNEGKPVTNSRDTQDINLEQGIQMLKIFKEHVSKTSILEDFTFYENRQK 552
           LENN+ KPVTNSRDTQ++ LE+  Q+LKI       TSI +DF  YE RQ+
Sbjct: 521 LENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQE 571

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>YTHD3_HUMAN (Q7Z739) YTH domain protein 3|
          Length = 585

 Score =  198 bits (503), Expect = 1e-50
 Identities = 96/171 (56%), Positives = 118/171 (69%)
 Frame = +1

Query: 40  FNLEDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKGSSCP 219
           +N +DF     + + F+IKSYSEDDIH+SIKY++W ST +GNK+LDAAY+    KG   P
Sbjct: 404 YNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKG---P 460

Query: 220 IFLFFSVNTSGQFVGVAEMTGPVDFEKTLEYWQQDKWNGSFSVKWHIVKDVPNNILKHIV 399
           ++L FSVN SG F GVAEM   VD+      W QDKW G F VKW  VKDVPNN L+HI 
Sbjct: 461 LYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIR 520

Query: 400 LENNEGKPVTNSRDTQDINLEQGIQMLKIFKEHVSKTSILEDFTFYENRQK 552
           LENN+ KPVTNSRDTQ++ LE+  Q+LKI       TSI +DF  YE RQ+
Sbjct: 521 LENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQE 571

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>YTHD1_HUMAN (Q9BYJ9) YTH domain protein 1 (Dermatomyositis associated with|
           cancer putative autoantigen 1) (DACA-1)
          Length = 559

 Score =  197 bits (500), Expect = 2e-50
 Identities = 93/171 (54%), Positives = 121/171 (70%)
 Frame = +1

Query: 40  FNLEDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKGSSCP 219
           +N ++F       + F+IKSYSEDDIH+SIKY++W ST +GNK+LD+A++   +KG   P
Sbjct: 377 YNPKEFEWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKG---P 433

Query: 220 IFLFFSVNTSGQFVGVAEMTGPVDFEKTLEYWQQDKWNGSFSVKWHIVKDVPNNILKHIV 399
           ++L FSVN SG F GVAEM  PVD+  +   W QDKW G F V+W  VKDVPNN L+HI 
Sbjct: 434 VYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVQWIFVKDVPNNQLRHIR 493

Query: 400 LENNEGKPVTNSRDTQDINLEQGIQMLKIFKEHVSKTSILEDFTFYENRQK 552
           LENN+ KPVTNSRDTQ++ LE+  Q+LKI   +   TSI +DF  YE RQ+
Sbjct: 494 LENNDNKPVTNSRDTQEVPLEKAKQVLKIISSYKHTTSIFDDFAHYEKRQE 544

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>YTDC1_RAT (Q9QY02) YTH domain-containing protein 1 (Putative splicing factor|
           YT521) (RA301-binding protein)
          Length = 738

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
 Frame = +1

Query: 73  DAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKGSSCPIFLFFSVNTSG 252
           DA+FF+IKS + +++  +    VW++     KKL+ A++ A++      + L FSV  SG
Sbjct: 357 DARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARS------VILIFSVRESG 410

Query: 253 QFVGVAEMTGPVDFEKTLEYW------QQDKWNGSFSVKWHIVKDVPNNILKHIVLENNE 414
           +F G A ++       +  +W            G F + W   +++P     H+    NE
Sbjct: 411 KFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNE 470

Query: 415 GKPVTNSRDTQDINLEQGIQMLKIF 489
            KPV   RD Q+I LE G Q+  +F
Sbjct: 471 HKPVKIGRDGQEIELECGTQLCLLF 495

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>YTDC1_HUMAN (Q96MU7) YTH domain-containing protein 1 (Putative splicing factor|
           YT521)
          Length = 727

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
 Frame = +1

Query: 73  DAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKGSSCPIFLFFSVNTSG 252
           DA+FF+IKS + +++  +    VW++     KKL+ A++ A++      + L FSV  SG
Sbjct: 354 DARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARS------VILIFSVRESG 407

Query: 253 QFVGVAEMTGPVDFEKTLEYW------QQDKWNGSFSVKWHIVKDVPNNILKHIVLENNE 414
           +F G A ++       +  +W            G F + W   +++P     H+    NE
Sbjct: 408 KFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNE 467

Query: 415 GKPVTNSRDTQDINLEQGIQMLKIF 489
            KPV   RD Q+I LE G Q+  +F
Sbjct: 468 HKPVKIGRDGQEIELECGTQLCLLF 492

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>LPXA_CHLCV (Q820F0) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine|
           O-acyltransferase (EC 2.3.1.129)
           (UDP-N-acetylglucosamine acyltransferase)
          Length = 279

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
 Frame = +1

Query: 88  VIKSYSEDDIHKSIKYN--VWASTTNGNKKLDAAYQEAQAK---GSSCPIFLFFSVNTSG 252
           V+KSY+  D H +I     +W S   GNK  D  YQ  +     G +C I   F++ TS 
Sbjct: 39  VVKSYAYIDGHTTIGKGTTIWPSAMIGNKPQDLKYQGEKTYVTIGENCEI-REFAIITSS 97

Query: 253 QFVGVAEMTG 282
            F G     G
Sbjct: 98  TFEGTTVSIG 107

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>IL4RA_MOUSE (P16382) Interleukin-4 receptor alpha chain precursor (IL-4R-alpha)|
           (CD124 antigen) [Contains: Soluble interleukin-4
           receptor alpha chain (IL-4-binding protein) (IL4-BP)]
          Length = 810

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
 Frame = +1

Query: 271 EMTGPVDFEK-TLEYWQQDK--WNGSFSVKWHIVKDVPNNILKHIVLENNEGKPVTNSRD 441
           EM  PV  ++  +E W + +  W GSFS   ++    P+N+  H  + +       N   
Sbjct: 90  EMNRPVQSDRYQMELWAEHRQLWQGSFSPSGNVKPLAPDNLTLHTNVSDEWLLTWNNLYP 149

Query: 442 TQDINLEQGIQMLKIFKEHVSKTSILEDFTFYENR 546
           + ++  +  I M+ I +E      I+ + T+ E R
Sbjct: 150 SNNLLYKDLISMVNISREDNPAEFIVYNVTYKEPR 184

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>CTNB_URECA (P35224) Beta-catenin|
          Length = 818

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
 Frame = +1

Query: 235 SVNT-SGQFVGVAEMTGPVDFEKTLEYWQQDKWNGSFSVKWHIVKDVPNNI-LKHIVLEN 408
           SV T  GQ++ V EM  P+D ++    WQQ+++ G   ++       P ++  KH + + 
Sbjct: 15  SVGTPQGQYMDVGEMP-PMDAKQQTMLWQQNQYMGDSGIQSGATTQAPPSVSSKHGLDDM 73

Query: 409 NEGKPVTNSRDTQDINLEQGIQMLKIFKEHVSK 507
           + G+ +  SR   D   +QG       +E V +
Sbjct: 74  DTGEGMDTSRMMFD--FDQGFSTQAFTQEQVDE 104

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>Y939_SULTO (Q973G3) Hypothetical protein ST0939 precursor|
          Length = 709

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 15/55 (27%), Positives = 31/55 (56%)
 Frame = -3

Query: 413 SLFSRTMCLRMLLGTSLTMCHLTENEPFHLSCCQYSRVFSKSTGPVISATPTNCP 249
           S FS+ + + +   TS T+ HL +   +++    Y+ + + +   +ISATP++ P
Sbjct: 349 SNFSQKVTINVGNVTSYTIKHLKDGVTYYIQIVPYNSLGNGTPSDIISATPSSVP 403

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>Y926_STRP8 (Q8P1E4) Hypothetical UPF0230 protein spyM18_0926|
          Length = 282

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
 Frame = +1

Query: 28  DKAXFNLEDFPVQYDDAKFFVIKSYSEDDIHKSI--KYNVWASTTNGNKKLDAAYQEAQA 201
           DKA F+L D PV  DD  +F  ++ S DD ++ +    N+  ++     +LD       +
Sbjct: 20  DKAIFSL-DIPVIIDDETYFEGRNLSIDDFYQKMADSQNLPKTSQPSLSELDNLLGLLSS 78

Query: 202 KGSSCPIFLFFSVNTSG 252
           KG +  I LF +   SG
Sbjct: 79  KGYTHVIGLFLAGGISG 95

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>Y865_STRP1 (Q9A0A6) Hypothetical UPF0230 protein SPy0865/M5005_Spy0672|
          Length = 282

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
 Frame = +1

Query: 28  DKAXFNLEDFPVQYDDAKFFVIKSYSEDDIHKSI--KYNVWASTTNGNKKLDAAYQEAQA 201
           DKA F+L D PV  DD  +F  ++ S DD ++ +    N+  ++     +LD       +
Sbjct: 20  DKAIFSL-DIPVIIDDETYFEGRNLSIDDFYQKMADSQNLPKTSQPSLSELDNLLGLLSS 78

Query: 202 KGSSCPIFLFFSVNTSG 252
           KG +  I LF +   SG
Sbjct: 79  KGYTHVIGLFLAGGISG 95

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>Y690_STRP6 (Q5XCN8) Hypothetical UPF0230 protein M6_Spy0690|
          Length = 282

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
 Frame = +1

Query: 28  DKAXFNLEDFPVQYDDAKFFVIKSYSEDDIHKSI--KYNVWASTTNGNKKLDAAYQEAQA 201
           DKA F+L D PV  DD  +F  ++ S DD ++ +    N+  ++     +LD       +
Sbjct: 20  DKAIFSL-DIPVIIDDETYFEGRNLSIDDFYQKMADSQNLPKTSQPSLSELDNLLGLLSS 78

Query: 202 KGSSCPIFLFFSVNTSG 252
           KG +  I LF +   SG
Sbjct: 79  KGYTHVIGLFLAGGISG 95

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>Y655_ARCFU (O29602) Hypothetical protein AF0655|
          Length = 425

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 11/40 (27%), Positives = 25/40 (62%)
 Frame = +1

Query: 436 RDTQDINLEQGIQMLKIFKEHVSKTSILEDFTFYENRQKL 555
           RD QD+++E+ +++LK  ++ +    +     ++ENR+ L
Sbjct: 87  RDPQDMSIEEKVELLKDLEKIIRDVCVSTKLVYFENRRVL 126

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>Y586_STRP3 (Q8K7W6) Hypothetical UPF0230 protein SpyM3_0586/SPs1267|
          Length = 282

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
 Frame = +1

Query: 28  DKAXFNLEDFPVQYDDAKFFVIKSYSEDDIHKSI--KYNVWASTTNGNKKLDAAYQEAQA 201
           DKA F+L D PV  DD  +F  ++ S DD ++ +    N+  ++     +LD       +
Sbjct: 20  DKAIFSL-DIPVIIDDETYFEGRNLSIDDFYQKMADSKNLPKTSQPSLSELDNLLGLLSS 78

Query: 202 KGSSCPIFLFFSVNTSG 252
           KG +  I LF +   SG
Sbjct: 79  KGYTHVIGLFLAGGISG 95

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>RIBD_CHLTR (O84735) Riboflavin biosynthesis protein ribD [Includes:|
           Diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (EC 3.5.4.26) (Riboflavin-specific deaminase);
           5-amino-6-(5-phosphoribosylamino)uracil reductase (EC
           1.1.1.193) (HTP reductase)]
          Length = 375

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -3

Query: 308 SRVFSKSTGPVISATPTNCPLVFTEKNKNIG 216
           SRVF  S+G  + AT   CP  + +K K++G
Sbjct: 238 SRVFDLSSGSTLFATTQQCPKEYIQKLKDLG 268

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>MAD1_YARLI (Q6C452) Spindle assembly checkpoint component MAD1 (Mitotic arrest|
           deficient protein 1)
          Length = 704

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 163 NKKLDAAYQEAQAKGSSCPIFLFF-SVNTSGQFVGVAEMTGPVDFEKTLEYWQQDK 327
           NKK+      AQ+   S   F F    N  GQF GV +     +F   ++YW +DK
Sbjct: 626 NKKVKVTSMYAQSDEDS---FTFLPDPNHKGQFAGVIDSPLTDEFSNIVDYWVKDK 678

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>SYE2_EHRRW (Q5HB98) Glutamyl-tRNA synthetase 2 (EC 6.1.1.17) (Glutamate--tRNA|
           ligase 2) (GluRS 2)
          Length = 470

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +1

Query: 7   KNADDVADKAXFNLEDFPVQYDDAKFFVIKS 99
           KN  ++A+++ F +ED P+ +D     +IKS
Sbjct: 356 KNLVNLANESLFYVEDIPISFDQESLIIIKS 386

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>SYE2_EHRRG (Q5FGW4) Glutamyl-tRNA synthetase 2 (EC 6.1.1.17) (Glutamate--tRNA|
           ligase 2) (GluRS 2)
          Length = 470

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +1

Query: 7   KNADDVADKAXFNLEDFPVQYDDAKFFVIKS 99
           KN  ++A+++ F +ED P+ +D     +IKS
Sbjct: 356 KNLVNLANESLFYVEDIPISFDQESLIIIKS 386

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>CPXB_BACME (P14779) Bifunctional P-450:NADPH-P450 reductase (Cytochrome|
           P450(BM-3)) (P450BM-3) [Includes: Cytochrome P450 102
           (EC 1.14.14.1); NADPH--cytochrome P450 reductase (EC
           1.6.2.4)]
          Length = 1048

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
 Frame = +1

Query: 70  DDAKFFV--IKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKGSSCPIFLFFSVN 243
           D+AK FV  +   S D++ K ++Y+V+     G+K     YQ+        P F+  ++ 
Sbjct: 542 DNAKQFVDWLDQASADEV-KGVRYSVFGC---GDKNWATTYQKV-------PAFIDETLA 590

Query: 244 TSG--QFVGVAEMTGPVDFEKTLEYWQQDKWN 333
             G        E     DFE T E W++  W+
Sbjct: 591 AKGAENIADRGEADASDDFEGTYEEWREHMWS 622

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>IME1_YEAST (P21190) Meiosis-inducing protein 1|
          Length = 360

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
 Frame = +1

Query: 49  EDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQ------EAQAKGS 210
           + FP   D+   F  + YS    HKS   N + +T+N N   D  Y+      E Q    
Sbjct: 233 DQFPPHTDNIHSFNNRHYSN---HKSTNCNYYNNTSNNNNASDNVYEADPFIDEPQVPSY 289

Query: 211 SCPIFLFFSVNTS 249
             P+ + F V  S
Sbjct: 290 YYPLEIAFDVEKS 302

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>Y441_BUCAI (P57516) Hypothetical UPF0004 protein BU441|
          Length = 439

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 23/109 (21%), Positives = 47/109 (43%)
 Frame = +1

Query: 238 VNTSGQFVGVAEMTGPVDFEKTLEYWQQDKWNGSFSVKWHIVKDVPNNILKHIVLENNEG 417
           +  S  F+        +DFEKT+E+ +   ++ SFS                 +     G
Sbjct: 299 IQISSDFIVGFPGESEIDFEKTIEFIKNINFDMSFS----------------FIYSARPG 342

Query: 418 KPVTNSRDTQDINLEQGIQMLKIFKEHVSKTSILEDFTFYENRQKLMQE 564
            P +N  D  D++L++  + L I +E ++  ++L     + + Q ++ E
Sbjct: 343 TPASNMND--DLDLKEKKRRLYILQERINIQTMLWSRKMFGSIQSVLVE 389


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.132    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,534,383
Number of Sequences: 219361
Number of extensions: 1620152
Number of successful extensions: 3767
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3751
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)

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full-length cDNA and EST

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