| Clone Name | basd25l13 |
|---|---|
| Clone Library Name | barley_pub |
>YA0C_SCHPO (Q09680) Hypothetical protein C5H10.12c in chromosome I| Length = 371 Score = 42.4 bits (98), Expect = 3e-04 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 13/122 (10%) Frame = +1 Query: 67 IVEDEPKKAAYV---TFLAGSGDYW----KGVVGLAKGLRAVNSAYPLVVAVLPDVPEEH 225 ++++EP K Y+ T + DY+ + ++ K S YP+ + L V E Sbjct: 61 VLKEEPGKYTYMSLFTMPSTEEDYYFNATRVLIHRLKYHPTTKSKYPIHILALRGVDEWK 120 Query: 226 RQELLKQGCVVREIVP------VYPPESQTQFAMAYYVINYSKLRIWEFVEYERMVYLDA 387 + K G V I P VY S +Q A Y +SKLRI+E ++++++ +D+ Sbjct: 121 IERFRKDGASVIVIDPIASSDIVYDTSSFSQEISARYEQMFSKLRIFEQIQFDKICVIDS 180 Query: 388 DI 393 DI Sbjct: 181 DI 182
>GNT1A_KLULA (Q9Y761) Glucose N-acetyltransferase 1-A (EC 2.4.1.-)| (N-acetylglucosaminyltransferase A) Length = 460 Score = 33.5 bits (75), Expect = 0.13 Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 7/75 (9%) Frame = +1 Query: 187 LVVAVLPDVPEEH-------RQELLKQGCVVREIVPVYPPESQTQFAMAYYVINYSKLRI 345 LV L ++PE+ + + + C+V+ + + + Q ++ + +KLR+ Sbjct: 130 LVAKELTELPEDDSVTRMLAQFKEISDNCIVKPVENIVLSQGSAQ-----WMTSMTKLRV 184 Query: 346 WEFVEYERMVYLDAD 390 + VEY+R+VY D+D Sbjct: 185 FGMVEYKRIVYFDSD 199
>PYRH_BACHD (Q9KA65) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 239 Score = 33.1 bits (74), Expect = 0.16 Identities = 18/55 (32%), Positives = 31/55 (56%) Frame = +1 Query: 40 QAMAPMLKRIVEDEPKKAAYVTFLAGSGDYWKGVVGLAKGLRAVNSAYPLVVAVL 204 Q++A +K IVE + + A V G G+ W+G+ G AKG+ + Y ++A + Sbjct: 30 QSIASQIKEIVELDVEVAVVV----GGGNIWRGMAGSAKGMDRATADYMGMLATV 80
>GNT1_CANGA (Q6FQ15) Glucose N-acetyltransferase 1 (EC 2.4.1.-)| (N-acetylglucosaminyltransferase) Length = 501 Score = 30.8 bits (68), Expect = 0.82 Identities = 16/54 (29%), Positives = 30/54 (55%) Frame = +1 Query: 229 QELLKQGCVVREIVPVYPPESQTQFAMAYYVINYSKLRIWEFVEYERMVYLDAD 390 +EL + V++E+ + P Q+ + + +KL ++ EYER++YLD D Sbjct: 151 RELDSEQIVIKEVQNIVKPTDQSPWNESL-----TKLLVFGLTEYERIIYLDND 199
>PKN1_CORGL (Q8NU98) Probable serine/threonine protein kinase pknB (EC| 2.7.11.1) Length = 646 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = +1 Query: 214 PEEHRQELLKQGCVVREIVPVYPP-ESQTQFAMAY 315 P + R ++ GCV+ E+V PP E ++ FA+AY Sbjct: 190 PADARSDIYATGCVMYELVTGKPPFEGESPFAVAY 224
>PKN1_COREF (Q8FUI5) Probable serine/threonine protein kinase CE0033 (EC| 2.7.11.1) Length = 660 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 12/69 (17%) Frame = +1 Query: 145 GLAKGLRAVNSAYPLVVAVLPDV-----------PEEHRQELLKQGCVVREIVPVYPP-E 288 G+A+ L SA AV+ P + R ++ GCV+ E+V PP E Sbjct: 156 GIARALDDSTSAMTQTAAVIGTAQYLSPEQARGKPADARSDVYAAGCVLYELVTGRPPFE 215 Query: 289 SQTQFAMAY 315 ++ FA+AY Sbjct: 216 GESPFAVAY 224
>MURG_PASMU (P57817) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 354 Score = 30.0 bits (66), Expect = 1.4 Identities = 26/85 (30%), Positives = 38/85 (44%) Frame = +1 Query: 139 VVGLAKGLRAVNSAYPLVVAVLPDVPEEHRQELLKQGCVVREIVPVYPPESQTQFAMAYY 318 VVG ++G R +N P VVA L D E Q + QG V ++ +YP Sbjct: 187 VVGGSQGARVLNQTLPNVVAQLSDKLEVRHQ--VGQG-AVEQVTTLYP------------ 231 Query: 319 VINYSKLRIWEFVEYERMVYLDADI 393 ++ + I EF++ Y ADI Sbjct: 232 --EHASVTITEFIDNMADAYAWADI 254
>GLG2_YEAST (P47011) Glycogen synthesis initiator protein GLG2| Length = 380 Score = 29.3 bits (64), Expect = 2.4 Identities = 9/19 (47%), Positives = 17/19 (89%) Frame = +1 Query: 334 KLRIWEFVEYERMVYLDAD 390 K R+WE V+++++++LDAD Sbjct: 104 KARLWELVQFDQVLFLDAD 122
>YOPRL_PSEPU (P0A131) Hypothetical protein in oprL 3'region precursor (ORF2)| Length = 268 Score = 28.5 bits (62), Expect = 4.1 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 13/78 (16%) Frame = +1 Query: 112 AGSGDYWKGVVGLAKG-LRAVNSAYPLVVAVLP---DVP---------EEHRQELLKQGC 252 AG+ YW G V LAKG L+ + A+ V P VP E K Sbjct: 184 AGNAQYWLGEVNLAKGDLQGASQAFAQVSQKYPKHSKVPDSLYKLADVERRMGHTDKVKG 243 Query: 253 VVREIVPVYPPESQTQFA 306 +++++V YP S Q A Sbjct: 244 ILQQVVTQYPGTSAAQLA 261
>Y1224_PSEPK (P0A130) Hypothetical protein PP1224 precursor| Length = 268 Score = 28.5 bits (62), Expect = 4.1 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 13/78 (16%) Frame = +1 Query: 112 AGSGDYWKGVVGLAKG-LRAVNSAYPLVVAVLP---DVP---------EEHRQELLKQGC 252 AG+ YW G V LAKG L+ + A+ V P VP E K Sbjct: 184 AGNAQYWLGEVNLAKGDLQGASQAFAQVSQKYPKHSKVPDSLYKLADVERRMGHTDKVKG 243 Query: 253 VVREIVPVYPPESQTQFA 306 +++++V YP S Q A Sbjct: 244 ILQQVVTQYPGTSAAQLA 261
>SPTA1_MOUSE (P08032) Spectrin alpha chain, erythrocyte (Erythroid alpha-spectrin)| Length = 2415 Score = 28.5 bits (62), Expect = 4.1 Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 11/89 (12%) Frame = +1 Query: 13 EARQEGPTEQAMAPMLKRIVEDEPKKAAYVTFLAGSGDYWKGVVGLAKGLRAVN---SAY 183 E +E +E L I + + + A++ LAG+ + + ++ L K ++A+N S Y Sbjct: 2056 ENAEEDMSEPVHCVSLNEIRQLQKEHEAFLASLAGAQEDFNYLLELDKQIKALNVPSSPY 2115 Query: 184 P-LVVAVL-------PDVPEEHRQELLKQ 246 L V VL PD+ +E QEL K+ Sbjct: 2116 TWLTVDVLGRIWNHLPDIIKEREQELQKE 2144
>ADD_CAUCR (Q9A3M3) Adenosine deaminase (EC 3.5.4.4) (Adenosine| aminohydrolase) Length = 344 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%) Frame = -2 Query: 144 DHALPVVAGAGEEG---HVRRLLGLVLHDPLEHGSHCLLGRSL 25 D L VVA AGEEG +V + LV D ++HG+ L +L Sbjct: 196 DLGLKVVAHAGEEGPPAYVWEAIDLVKVDRIDHGNRALEDEAL 238
>RNH21_SYMTH (Q67PD4) Ribonuclease HII 1 (EC 3.1.26.4) (RNase HII 1)| Length = 259 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = +1 Query: 181 YPLVVAVLPDVPEEHRQELLKQGCVVREIVPVYPPESQTQFAMAYYVINYSKLRIW 348 YP V+A L D P E Q L++Q Y E + Q A+ + NY + ++W Sbjct: 16 YPEVIAALKDDPREGAQRLVRQ-------CQTYLKERERQRAVLQRMYNYER-QLW 63
>MDH_PYRAE (Q8ZVB2) Malate dehydrogenase (EC 1.1.1.37)| Length = 309 Score = 28.5 bits (62), Expect = 4.1 Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 30/106 (28%) Frame = +1 Query: 58 LKRIVEDEPKKAAYVTFLAGSGDYWKGVVGLA-----------------------KGLRA 168 LK +VE+ K A +T L G W GLA G+R Sbjct: 200 LKEVVEETVKAGARITELRGFSSNWGPGAGLAIMAEAVKRDAKRALIASVVLQGEYGVRD 259 Query: 169 VNSAYPL------VVAVLP-DVPEEHRQELLKQGCVVREIVPVYPP 285 V P+ VV VL ++ EE RQ+ ++ V+++V PP Sbjct: 260 VPVEVPIILGRSGVVKVLEVELTEEERQKFMQSVEAVKKLVASVPP 305
>HEMH_AQUAE (O67083) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 309 Score = 28.5 bits (62), Expect = 4.1 Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 3/105 (2%) Frame = +1 Query: 31 PTEQAMAPMLKRIVEDEPKKAAYVTFLAGSGDYWKGVVGLAKGLRA-VNSAYPLVVAVLP 207 P ++ +A ++ ++ K Y + G ++ + AK L+ + Y +VV + Sbjct: 36 PFQKVLAKIIAKL--RAKKTRHYYELMGGKSPQYEQTLEQAKALQERLGEDYKVVVGMRY 93 Query: 208 DVP--EEHRQELLKQGCVVREIVPVYPPESQTQFAMAYYVINYSK 336 P ++ ELLK+G ++P+YP S+T A+ SK Sbjct: 94 WKPYIKDALSELLKEGINEVILLPLYPQYSKTTTGSAFNEFERSK 138
>KIN3_YEAST (P22209) Serine/threonine-protein kinase KIN3 (EC 2.7.11.1)| Length = 435 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 8/58 (13%) Frame = +1 Query: 136 GVVGLAKGLRA--------VNSAYPLVVAVLPDVPEEHRQELLKQGCVVREIVPVYPP 285 G GLAK L V + Y + VL D P ++ GCV+ E+ ++PP Sbjct: 230 GDFGLAKSLETSIQFATTYVGTPYYMSPEVLMDQPYSPLSDIWSLGCVIFEMCSLHPP 287
>ACT9_ARATH (P93738) Putative actin-9| Length = 366 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = -2 Query: 114 GEEGHVRRLLGLVLHDPLEHG 52 GEEGH R + L L DP+EHG Sbjct: 46 GEEGHANRDI-LTLKDPMEHG 65
>YL52_CAEEL (P34431) Hypothetical protein F44E2.2 in chromosome III| Length = 2186 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +1 Query: 70 VEDEPKKAAYVTFLAGSGDYWKGVVGLAK 156 +E P+K +T LAG +YWK V AK Sbjct: 2094 LEAHPRKTLEMTALAGKVEYWKAVQTRAK 2122
>GNT1B_KLULA (Q6CT96) Glucose N-acetyltransferase 1-B (EC 2.4.1.-)| (N-acetylglucosaminyltransferase B) Length = 453 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +1 Query: 256 VREIVPVYPPESQTQFAMAYYVINYSKLRIWEFVEYERMVYLDAD 390 V E+ V P T ++ + +KL I+ +YER++Y+D D Sbjct: 150 VTEVGSVIQPNDHTPWSKSL-----TKLAIFNLTDYERIIYMDND 189
>PYRH_LACLA (Q9CE38) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 238 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/57 (26%), Positives = 28/57 (49%) Frame = +1 Query: 34 TEQAMAPMLKRIVEDEPKKAAYVTFLAGSGDYWKGVVGLAKGLRAVNSAYPLVVAVL 204 T +A+A LK + + A + + G G+ W+GV G G+ + Y ++A + Sbjct: 30 TAKAVAEELKEVHD----LGAELAIVCGGGNVWRGVTGEKAGMERAQADYMGMLATI 82
>SYL_GEOSL (Q74AZ0) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 824 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/59 (33%), Positives = 26/59 (44%) Frame = +1 Query: 166 AVNSAYPLVVAVLPDVPEEHRQELLKQGCVVREIVPVYPPESQTQFAMAYYVINYSKLR 342 AV S L+ +P V EE + L QG V P Y PE+ + + V KLR Sbjct: 717 AVESVVQLLAPFVPHVAEELWESLGHQGGVEASGWPSYDPEATVEEELLIVVQVNGKLR 775
>GIDA_PORGI (Q7MTG9) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 625 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/78 (21%), Positives = 38/78 (48%) Frame = +1 Query: 157 GLRAVNSAYPLVVAVLPDVPEEHRQELLKQGCVVREIVPVYPPESQTQFAMAYYVINYSK 336 G+ V S P + ++ ++P R+E+++ EI+ Y + + A+A + Sbjct: 516 GMNEVCSMVPSLQRIVEEIPASRREEIVE----AAEILIKYDGYIKRERALADKINRLES 571 Query: 337 LRIWEFVEYERMVYLDAD 390 +R+ + V+Y +M L + Sbjct: 572 IRLPQHVDYMQMQSLSTE 589
>AMBN_HUMAN (Q9NP70) Ameloblastin precursor| Length = 447 Score = 27.7 bits (60), Expect = 6.9 Identities = 11/36 (30%), Positives = 19/36 (52%) Frame = +3 Query: 276 LPAGEPDPVRHGLLRHQLLQAPHLGVRGVREDGVPG 383 +P PD + + +L APH G+ + +D +PG Sbjct: 328 MPEANPDNLENPAFLTELEPAPHAGLLALPKDDIPG 363
>MURG_HAEIN (P45065) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 351 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/70 (31%), Positives = 35/70 (50%) Frame = +1 Query: 139 VVGLAKGLRAVNSAYPLVVAVLPDVPEEHRQELLKQGCVVREIVPVYPPESQTQFAMAYY 318 VVG ++G R +N P VVA L D E Q + +G V E+ +Y E+ Q + + Sbjct: 185 VVGGSQGARVLNHTLPKVVAQLADKLEFRHQ--VGKG-AVEEVSQLY-GENLEQVKITEF 240 Query: 319 VINYSKLRIW 348 + N ++ W Sbjct: 241 IDNMAEAYAW 250
>MURG_HAEI8 (Q4QLF8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 351 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/70 (31%), Positives = 35/70 (50%) Frame = +1 Query: 139 VVGLAKGLRAVNSAYPLVVAVLPDVPEEHRQELLKQGCVVREIVPVYPPESQTQFAMAYY 318 VVG ++G R +N P VVA L D E Q + +G V E+ +Y E+ Q + + Sbjct: 185 VVGGSQGARVLNHTLPKVVAQLADKLELRHQ--VGKG-AVEEVSQLY-GENLEQVKITEF 240 Query: 319 VINYSKLRIW 348 + N ++ W Sbjct: 241 IDNMAEAYAW 250
>NQRA_PSEAE (Q9HZK6) Na(+)-translocating NADH-quinone reductase subunit A (EC| 1.6.5.-) (Na(+)-translocating NQR subunit A) (Na(+)-NQR subunit A) (NQR complex subunit A) (NQR-1 subunit A) Length = 445 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Frame = -2 Query: 129 VVAGAGEEGHVRRLLGLVLHDPLEHGSHCLLGR--SLLSCFKSKD 1 + AG + G+ R + G VL HG++ LGR LSC K D Sbjct: 285 LAAGQLQPGNNRLISGSVLGGRTAHGAYAYLGRYHLQLSCLKEGD 329
>PHF3_HUMAN (Q92576) PHD finger protein 3| Length = 2039 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Frame = +1 Query: 13 EARQEGPTEQ---AMAPMLKRIVEDEPKKAAYVTFLAGSGDYWKGVVGLAKGLRAVNSAY 183 E +QE P A P + VE E TFLA WKG + + + V AY Sbjct: 1173 EEKQESPKSTFSPAPRPEMPGTVEVES------TFLARLNFIWKGFINMPSVAKFVTKAY 1226 Query: 184 PL 189 P+ Sbjct: 1227 PV 1228
>GNT1_DEBHA (Q6BUZ2) Glucose N-acetyltransferase 1 (EC 2.4.1.-)| (N-acetylglucosaminyltransferase) Length = 464 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/22 (45%), Positives = 17/22 (77%) Frame = +1 Query: 325 NYSKLRIWEFVEYERMVYLDAD 390 +++K I+ V+Y+R+VY DAD Sbjct: 148 SFTKFHIFNEVKYDRIVYFDAD 169
>STRC_MOUSE (Q8VIM6) Stereocilin precursor| Length = 1809 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -2 Query: 126 VAGAGEEGHVRRLLGLVLHDPLEHGSHCLLGRSLLSCFKSKD 1 VAG G GH R +L +++ +E G +L L+CF S + Sbjct: 935 VAGLGP-GHARHVLRSLVNQSMEDGEEQVLRLGSLACFLSPE 975 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,933,447 Number of Sequences: 219361 Number of extensions: 664398 Number of successful extensions: 2805 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 2764 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2805 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)