ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd26a12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 206 6e-50
2dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic D... 206 6e-50
3dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic D... 206 6e-50
4dbj|AK063880.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
5gb|AC102597.22| Mus musculus chromosome 18, clone RP23-361H2, co... 46 0.14
6gb|AC158499.5| Mus musculus chromosome 18, clone RP23-466O5, com... 46 0.14
7ref|NM_129043.3| Arabidopsis thaliana IMB1 (IMBIBITION-INDUCIBLE... 44 0.55
8ref|NM_201873.1| Arabidopsis thaliana IMB1 (IMBIBITION-INDUCIBLE... 44 0.55
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.55
10gb|AY180100.1| Arabidopsis thaliana IMB1 (At2g34900) mRNA, compl... 44 0.55
11gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I3 map... 44 0.55
12gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.55
13dbj|AK222242.1| Arabidopsis thaliana mRNA for RING3 protein-like... 44 0.55
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.55
15emb|BX820082.1|CNS0A9C5 Arabidopsis thaliana Full-length cDNA Co... 44 0.55
16emb|BX820056.1|CNS0A9G7 Arabidopsis thaliana Full-length cDNA Co... 44 0.55
17gb|AY796305.1| Homo sapiens neurofibromin 1 (neurofibromatosis, ... 42 2.2
18gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome 42 2.2
19emb|X63789.1|TTSNRU51 T.thermophila genes for snRNA U5-1, snRNA ... 42 2.2
20gb|AC079915.7| Homo sapiens chromosome , clone RP11-142O6, compl... 42 2.2
21gb|AE013218.1| Buchnera aphidicola str. Sg (Schizaphis graminum)... 42 2.2
22gb|AC004222.1|AC004222 Homo sapiens chromosome 17, clone HCIT499... 42 2.2
23gb|AC004526.1|AC004526 Homo sapiens chromosome 17, Neurofibromat... 42 2.2
24gb|AF003385.2| Caenorhabditis elegans cosmid R08F11, complete se... 40 8.6
25gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 8.6
26gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 8.6
27gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 8.6
28gb|AC166939.2| Mus musculus BAC clone RP23-72K19 from chromosome... 40 8.6
29gb|AC147050.2| Pan troglodytes BAC clone RP43-138F4 from 7, comp... 40 8.6
30gb|CP000001.1| Bacillus cereus E33L, complete genome 40 8.6
31gb|AC140951.1| Pan troglodytes BAC clone RP43-60K3 from 7, compl... 40 8.6
32emb|AL356598.24| Human DNA sequence from clone RP11-750K17 on ch... 40 8.6
33emb|AL354813.31| Human DNA sequence from clone CTD-2653D5 on chr... 40 8.6
34emb|AL139139.9| Human DNA sequence from clone RP5-1052I5 on chro... 40 8.6
35gb|AC165284.2| Mus musculus BAC clone RP24-378E14 from chromosom... 40 8.6
36gb|AC120746.5| Rattus norvegicus BAC CH230-25H1 (Children's Hos... 40 8.6
37dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 40 8.6
38gb|AC093854.2| Homo sapiens BAC clone RP11-503F14 from 4, comple... 40 8.6
39gb|AC091097.8| Homo sapiens chromosome 11, clone RP11-65C9, comp... 40 8.6
40gb|AC090281.8| Homo sapiens chromosome 8, clone RP5-1009N12, com... 40 8.6
41gb|AC008066.4| Homo sapiens BAC clone RP11-293D9 from 8, complet... 40 8.6
42gb|AC148300.3| Pan troglodytes BAC clone CH251-64B13 from chromo... 40 8.6
43gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome 40 8.6
44gb|AC159818.2| Mus musculus BAC clone RP23-244M3 from chromosome... 40 8.6
45gb|AC087072.2|AC087072 Homo sapiens chromosome 7 clone RP11-609L... 40 8.6
46gb|AC083864.2|AC083864 Homo sapiens chromosome 7 clone RP11-196O... 40 8.6
47gb|AC175466.2| Gallus gallus BAC clone CH261-8A20 from chromosom... 40 8.6
48gb|AC007126.6|AC007126 Homo sapiens chromosome 4 clone C0496D08,... 40 8.6
49gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 8.6
50gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 8.6
51gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 8.6
52gb|AC132372.4| Mus musculus BAC clone RP23-478B10 from 8, comple... 40 8.6
53dbj|AP006370.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 8.6
54emb|AL845364.4| Mouse DNA sequence from clone RP23-301M3 on chro... 40 8.6 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  206 bits (104), Expect = 6e-50
 Identities = 191/220 (86%)
 Strand = Plus / Plus

                                                                           
Query: 206     agattataacaaaacctatggatttctcgaccatccaaaacaaaatggaagggaaggatg 265
               ||||||| || |||||||||||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 2025359 agattatcaccaaacctatggatttttcgaccatacaaaagaaaatggaagggaaagatg 2025418

                                                                           
Query: 266     gtaccaagtataaaagtgttcgagaaatatattctgatgttagattaatttttaacaatg 325
                 | ||||||||| | ||| |||||||||||||| ||||||||||||||||||  |||||
Sbjct: 2025419 acaacaagtataacaatgtccgagaaatatattcggatgttagattaatttttgccaatg 2025478

                                                                           
Query: 326     caatgacatataatgatgaacatcacgatgttcacataatggccaagttattactagaca 385
               ||||||  || ||||||||||  || |||||||| |||||||| || | ||| || || |
Sbjct: 2025479 caatgaagtacaatgatgaacgacatgatgttcatataatggcgaaatcattgcttgaga 2025538

                                                       
Query: 386     aatttgaggagaaatggctccagcttcttcctaaagttga 425
               ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2025539 aatttgaagagaaatggctccagcttcttcctaaagttga 2025578



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                         
Query: 477     ttctccggaagatgctattgcaaaattagcaaaagatactga 518
               |||||| ||||| |||||||||||| ||||||||||||||||
Sbjct: 2025734 ttctccagaagaagctattgcaaaactagcaaaagatactga 2025775



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                           
Query: 126     ccagataacgtctcatgaatggtcagcgccatttctgcaaccggtagatgttgtaggcct 185
               |||||| || |||||||||||| | | |||||||||  | ||||| ||||| ||||||||
Sbjct: 2023520 ccagatcacatctcatgaatgggccgagccatttctcaagccggttgatgtggtaggcct 2023579

                                     
Query: 186     acaacttgatgactatcacaag 207
                || |||||||||||| |||||
Sbjct: 2023580 tcagcttgatgactattacaag 2023601



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                               
Query: 585     gaaaatgaccacagacgagaagagaaaacttggtgcaggtctttgcca 632
               ||||||||| ||| | ||||| |||||||| ||||||||||| |||||
Sbjct: 2026351 gaaaatgactacatatgagaaaagaaaactgggtgcaggtctctgcca 2026398



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 81      caaagggatgcctgacctcatgcgccag 108
               ||||||||||||||| || |||||||||
Sbjct: 2022925 caaagggatgcctgatcttatgcgccag 2022952
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>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0548D03
          Length = 156709

 Score =  206 bits (104), Expect = 6e-50
 Identities = 191/220 (86%)
 Strand = Plus / Plus

                                                                          
Query: 206    agattataacaaaacctatggatttctcgaccatccaaaacaaaatggaagggaaggatg 265
              ||||||| || |||||||||||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 154139 agattatcaccaaacctatggatttttcgaccatacaaaagaaaatggaagggaaagatg 154198

                                                                          
Query: 266    gtaccaagtataaaagtgttcgagaaatatattctgatgttagattaatttttaacaatg 325
                | ||||||||| | ||| |||||||||||||| ||||||||||||||||||  |||||
Sbjct: 154199 acaacaagtataacaatgtccgagaaatatattcggatgttagattaatttttgccaatg 154258

                                                                          
Query: 326    caatgacatataatgatgaacatcacgatgttcacataatggccaagttattactagaca 385
              ||||||  || ||||||||||  || |||||||| |||||||| || | ||| || || |
Sbjct: 154259 caatgaagtacaatgatgaacgacatgatgttcatataatggcgaaatcattgcttgaga 154318

                                                      
Query: 386    aatttgaggagaaatggctccagcttcttcctaaagttga 425
              ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 154319 aatttgaagagaaatggctccagcttcttcctaaagttga 154358



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                        
Query: 477    ttctccggaagatgctattgcaaaattagcaaaagatactga 518
              |||||| ||||| |||||||||||| ||||||||||||||||
Sbjct: 154514 ttctccagaagaagctattgcaaaactagcaaaagatactga 154555



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                          
Query: 126    ccagataacgtctcatgaatggtcagcgccatttctgcaaccggtagatgttgtaggcct 185
              |||||| || |||||||||||| | | |||||||||  | ||||| ||||| ||||||||
Sbjct: 152300 ccagatcacatctcatgaatgggccgagccatttctcaagccggttgatgtggtaggcct 152359

                                    
Query: 186    acaacttgatgactatcacaag 207
               || |||||||||||| |||||
Sbjct: 152360 tcagcttgatgactattacaag 152381



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                              
Query: 585    gaaaatgaccacagacgagaagagaaaacttggtgcaggtctttgcca 632
              ||||||||| ||| | ||||| |||||||| ||||||||||| |||||
Sbjct: 155131 gaaaatgactacatatgagaaaagaaaactgggtgcaggtctctgcca 155178



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 81     caaagggatgcctgacctcatgcgccag 108
              ||||||||||||||| || |||||||||
Sbjct: 151705 caaagggatgcctgatcttatgcgccag 151732
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>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0041F13
          Length = 163230

 Score =  206 bits (104), Expect = 6e-50
 Identities = 191/220 (86%)
 Strand = Plus / Plus

                                                                         
Query: 206   agattataacaaaacctatggatttctcgaccatccaaaacaaaatggaagggaaggatg 265
             ||||||| || |||||||||||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 46221 agattatcaccaaacctatggatttttcgaccatacaaaagaaaatggaagggaaagatg 46280

                                                                         
Query: 266   gtaccaagtataaaagtgttcgagaaatatattctgatgttagattaatttttaacaatg 325
               | ||||||||| | ||| |||||||||||||| ||||||||||||||||||  |||||
Sbjct: 46281 acaacaagtataacaatgtccgagaaatatattcggatgttagattaatttttgccaatg 46340

                                                                         
Query: 326   caatgacatataatgatgaacatcacgatgttcacataatggccaagttattactagaca 385
             ||||||  || ||||||||||  || |||||||| |||||||| || | ||| || || |
Sbjct: 46341 caatgaagtacaatgatgaacgacatgatgttcatataatggcgaaatcattgcttgaga 46400

                                                     
Query: 386   aatttgaggagaaatggctccagcttcttcctaaagttga 425
             ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 46401 aatttgaagagaaatggctccagcttcttcctaaagttga 46440



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                       
Query: 477   ttctccggaagatgctattgcaaaattagcaaaagatactga 518
             |||||| ||||| |||||||||||| ||||||||||||||||
Sbjct: 46596 ttctccagaagaagctattgcaaaactagcaaaagatactga 46637



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                         
Query: 126   ccagataacgtctcatgaatggtcagcgccatttctgcaaccggtagatgttgtaggcct 185
             |||||| || |||||||||||| | | |||||||||  | ||||| ||||| ||||||||
Sbjct: 44382 ccagatcacatctcatgaatgggccgagccatttctcaagccggttgatgtggtaggcct 44441

                                   
Query: 186   acaacttgatgactatcacaag 207
              || |||||||||||| |||||
Sbjct: 44442 tcagcttgatgactattacaag 44463



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 585   gaaaatgaccacagacgagaagagaaaacttggtgcaggtctttgcca 632
             ||||||||| ||| | ||||| |||||||| ||||||||||| |||||
Sbjct: 47213 gaaaatgactacatatgagaaaagaaaactgggtgcaggtctctgcca 47260



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 81    caaagggatgcctgacctcatgcgccag 108
             ||||||||||||||| || |||||||||
Sbjct: 43787 caaagggatgcctgatcttatgcgccag 43814
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>dbj|AK063880.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-F07, full
           insert sequence
          Length = 567

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 93/112 (83%)
 Strand = Plus / Plus

                                                                       
Query: 521 atgagctgaatgagattaataggcagctggaggagctacggaacatggtggttcagagat 580
           ||||||||| ||| || || | |||| |||||||||| ||| | |||||||| |||| ||
Sbjct: 7   atgagctgattgaaatcaacaagcagttggaggagcttcggcaaatggtggtccagaaat 66

                                                               
Query: 581 gcaagaaaatgaccacagacgagaagagaaaacttggtgcaggtctttgcca 632
           ||  ||||||||| ||| | ||||| |||||||| ||||||||||| |||||
Sbjct: 67  gccggaaaatgactacatatgagaaaagaaaactgggtgcaggtctctgcca 118
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>gb|AC102597.22| Mus musculus chromosome 18, clone RP23-361H2, complete sequence
          Length = 204401

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 243   aaacaaaatggaagggaaggatg 265
             |||||||||||||||||||||||
Sbjct: 80124 aaacaaaatggaagggaaggatg 80102
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>gb|AC158499.5| Mus musculus chromosome 18, clone RP23-466O5, complete sequence
          Length = 164645

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 243    aaacaaaatggaagggaaggatg 265
              |||||||||||||||||||||||
Sbjct: 157393 aaacaaaatggaagggaaggatg 157371
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>ref|NM_129043.3| Arabidopsis thaliana IMB1 (IMBIBITION-INDUCIBLE 1); DNA binding
           AT2G34900 (IMB1) transcript variant AT2G34900.1 mRNA,
           complete cds
          Length = 1278

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 385 aaatttgaggagaaatggctcc 406
           ||||||||||||||||||||||
Sbjct: 672 aaatttgaggagaaatggctcc 693
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>ref|NM_201873.1| Arabidopsis thaliana IMB1 (IMBIBITION-INDUCIBLE 1); DNA binding
           AT2G34900 (IMB1) transcript variant AT2G34900.2 mRNA,
           complete cds
          Length = 1380

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 385 aaatttgaggagaaatggctcc 406
           ||||||||||||||||||||||
Sbjct: 635 aaatttgaggagaaatggctcc 656
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 398     aatggctccagcttcttcctaa 419
               ||||||||||||||||||||||
Sbjct: 4053548 aatggctccagcttcttcctaa 4053569
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>gb|AY180100.1| Arabidopsis thaliana IMB1 (At2g34900) mRNA, complete cds
          Length = 1161

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 385 aaatttgaggagaaatggctcc 406
           ||||||||||||||||||||||
Sbjct: 607 aaatttgaggagaaatggctcc 628
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>gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I3 map ve016, complete
             sequence
          Length = 108484

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 385   aaatttgaggagaaatggctcc 406
             ||||||||||||||||||||||
Sbjct: 52910 aaatttgaggagaaatggctcc 52889
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>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0061L19, from chromosome 3, complete sequence
          Length = 153322

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 398   aatggctccagcttcttcctaa 419
             ||||||||||||||||||||||
Sbjct: 45820 aatggctccagcttcttcctaa 45799
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>dbj|AK222242.1| Arabidopsis thaliana mRNA for RING3 protein-like, complete cds,
           clone: RAFL25-49-G02
          Length = 1372

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 385 aaatttgaggagaaatggctcc 406
           ||||||||||||||||||||||
Sbjct: 644 aaatttgaggagaaatggctcc 665
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 398     aatggctccagcttcttcctaa 419
               ||||||||||||||||||||||
Sbjct: 4053659 aatggctccagcttcttcctaa 4053680
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>emb|BX820082.1|CNS0A9C5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS71ZG11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1278

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 385 aaatttgaggagaaatggctcc 406
           ||||||||||||||||||||||
Sbjct: 672 aaatttgaggagaaatggctcc 693
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>emb|BX820056.1|CNS0A9G7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS69ZF03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1385

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 385 aaatttgaggagaaatggctcc 406
           ||||||||||||||||||||||
Sbjct: 640 aaatttgaggagaaatggctcc 661
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>gb|AY796305.1| Homo sapiens neurofibromin 1 (neurofibromatosis, von Recklinghausen
             disease, Watson disease) (NF1) gene, complete cds
          Length = 283312

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 67    agggacagccactgcaaaggg 87
             |||||||||||||||||||||
Sbjct: 99925 agggacagccactgcaaaggg 99945
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>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome
          Length = 1111496

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 493    attgcaaaattagcaaaagatactgatgatgag 525
              |||| |||||||||||||||||  |||||||||
Sbjct: 164147 attgaaaaattagcaaaagatagggatgatgag 164179
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>emb|X63789.1|TTSNRU51 T.thermophila genes for snRNA U5-1, snRNA U5-2
          Length = 3364

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 492 tattgcaaaattagcaaaaga 512
           |||||||||||||||||||||
Sbjct: 857 tattgcaaaattagcaaaaga 837
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>gb|AC079915.7| Homo sapiens chromosome , clone RP11-142O6, complete sequence
          Length = 145148

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 67     agggacagccactgcaaaggg 87
              |||||||||||||||||||||
Sbjct: 114205 agggacagccactgcaaaggg 114225
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>gb|AE013218.1| Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome
          Length = 641454

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 299    ctgatgttagattaattttta 319
              |||||||||||||||||||||
Sbjct: 386323 ctgatgttagattaattttta 386303
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>gb|AC004222.1|AC004222 Homo sapiens chromosome 17, clone HCIT499I20, complete sequence
          Length = 119136

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 67    agggacagccactgcaaaggg 87
             |||||||||||||||||||||
Sbjct: 67906 agggacagccactgcaaaggg 67886
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>gb|AC004526.1|AC004526 Homo sapiens chromosome 17, Neurofibromatosis 1  locus, complete
             sequence
          Length = 297898

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 67    agggacagccactgcaaaggg 87
             |||||||||||||||||||||
Sbjct: 12621 agggacagccactgcaaaggg 12641
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>gb|AF003385.2| Caenorhabditis elegans cosmid R08F11, complete sequence
          Length = 32838

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  aagtataaaagtgttcgaga 290
            ||||||||||||||||||||
Sbjct: 8483 aagtataaaagtgttcgaga 8464
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 492    tattgcaaaattagcaaaag 511
              ||||||||||||||||||||
Sbjct: 748767 tattgcaaaattagcaaaag 748786
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 492    tattgcaaaattagcaaaag 511
              ||||||||||||||||||||
Sbjct: 757820 tattgcaaaattagcaaaag 757839
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 492    tattgcaaaattagcaaaag 511
              ||||||||||||||||||||
Sbjct: 757715 tattgcaaaattagcaaaag 757734
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>gb|AC166939.2| Mus musculus BAC clone RP23-72K19 from chromosome 8, complete sequence
          Length = 236510

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   ccatccaaaacaaaatggaa 255
             ||||||||||||||||||||
Sbjct: 56571 ccatccaaaacaaaatggaa 56590
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>gb|AC147050.2| Pan troglodytes BAC clone RP43-138F4 from 7, complete sequence
          Length = 190626

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 611   aacttggtgcaggtctttgc 630
             ||||||||||||||||||||
Sbjct: 61185 aacttggtgcaggtctttgc 61166
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 492    tattgcaaaattagcaaaag 511
              ||||||||||||||||||||
Sbjct: 747781 tattgcaaaattagcaaaag 747800
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>gb|AC140951.1| Pan troglodytes BAC clone RP43-60K3 from 7, complete sequence
          Length = 165269

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 611  aacttggtgcaggtctttgc 630
            ||||||||||||||||||||
Sbjct: 6804 aacttggtgcaggtctttgc 6785
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>emb|AL356598.24| Human DNA sequence from clone RP11-750K17 on chromosome 13, complete
             sequence
          Length = 71115

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   ttagattaatttttaacaat 324
             ||||||||||||||||||||
Sbjct: 48578 ttagattaatttttaacaat 48559
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>emb|AL354813.31| Human DNA sequence from clone CTD-2653D5 on chromosome 20 Contains
            part of the gene for a novel protein similar to
            glucosamine-6-sulfatases (SULF2) (sulfatase 2, H-SULF2,
            KIAA1247), complete sequence
          Length = 93156

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 15   cagtggagggcgcagggcca 34
            ||||||||||||||||||||
Sbjct: 6343 cagtggagggcgcagggcca 6362
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>emb|AL139139.9| Human DNA sequence from clone RP5-1052I5 on chromosome 1p22.1-31.1
             Contains gene LOC339524 and the 3' end of a variant of the
             HS2ST1 gene for heparan sulfate 2-O-sulfotransferase 1
             (FLJ11317), complete sequence
          Length = 82299

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    tggtgcaagggacagccact 79
             ||||||||||||||||||||
Sbjct: 61068 tggtgcaagggacagccact 61049
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>gb|AC165284.2| Mus musculus BAC clone RP24-378E14 from chromosome 14, complete
             sequence
          Length = 202193

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 574   cagagatgcaagaaaatgac 593
             ||||||||||||||||||||
Sbjct: 26182 cagagatgcaagaaaatgac 26163
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>gb|AC120746.5| Rattus norvegicus  BAC CH230-25H1 (Children's Hospital Oakland Research
             Institute Rat (BN/SsNHsd/MCW) BAC library) complete
             sequence
          Length = 234610

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 581   gcaagaaaatgaccacagac 600
             ||||||||||||||||||||
Sbjct: 69042 gcaagaaaatgaccacagac 69023
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>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 509     aagatactgatgatgagctg 528
               ||||||||||||||||||||
Sbjct: 1798944 aagatactgatgatgagctg 1798925
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>gb|AC093854.2| Homo sapiens BAC clone RP11-503F14 from 4, complete sequence
          Length = 167663

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   aagattataacaaaacctat 224
             ||||||||||||||||||||
Sbjct: 11473 aagattataacaaaacctat 11492
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>gb|AC091097.8| Homo sapiens chromosome 11, clone RP11-65C9, complete sequence
          Length = 162515

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 61    ggtgcaagggacagccactgcaaa 84
             ||||||||||||||||| ||||||
Sbjct: 68056 ggtgcaagggacagccagtgcaaa 68033
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>gb|AC090281.8| Homo sapiens chromosome 8, clone RP5-1009N12, complete sequence
          Length = 114875

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   acaaatttgaggagaaatgg 402
             ||||||||||||||||||||
Sbjct: 85071 acaaatttgaggagaaatgg 85052
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>gb|AC008066.4| Homo sapiens BAC clone RP11-293D9 from 8, complete sequence
          Length = 174347

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 383   acaaatttgaggagaaatgg 402
             ||||||||||||||||||||
Sbjct: 97014 acaaatttgaggagaaatgg 97033
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>gb|AC148300.3| Pan troglodytes BAC clone CH251-64B13 from chromosome 7, complete
             sequence
          Length = 173568

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 611   aacttggtgcaggtctttgc 630
             ||||||||||||||||||||
Sbjct: 61162 aacttggtgcaggtctttgc 61143
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>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome
          Length = 2839318

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 505     gcaaaagatactgatgatga 524
               ||||||||||||||||||||
Sbjct: 1864392 gcaaaagatactgatgatga 1864373
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>gb|AC159818.2| Mus musculus BAC clone RP23-244M3 from chromosome 12, complete sequence
          Length = 169374

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 243    aaacaaaatggaagggaaggatgg 266
              ||||||||||||||| ||||||||
Sbjct: 103018 aaacaaaatggaaggtaaggatgg 103041
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>gb|AC087072.2|AC087072 Homo sapiens chromosome 7 clone RP11-609L3, complete sequence
          Length = 150856

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 611    aacttggtgcaggtctttgc 630
              ||||||||||||||||||||
Sbjct: 149817 aacttggtgcaggtctttgc 149836
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>gb|AC083864.2|AC083864 Homo sapiens chromosome 7 clone RP11-196O2, complete sequence
          Length = 156064

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 611    aacttggtgcaggtctttgc 630
              ||||||||||||||||||||
Sbjct: 117267 aacttggtgcaggtctttgc 117248
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>gb|AC175466.2| Gallus gallus BAC clone CH261-8A20 from chromosome ul, complete sequence
          Length = 233533

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    gctccagcttcttcctaaag 421
              ||||||||||||||||||||
Sbjct: 182141 gctccagcttcttcctaaag 182160
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>gb|AC007126.6|AC007126 Homo sapiens chromosome 4 clone C0496D08, complete sequence
          Length = 218698

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 301    gatgttagattaatttttaacaat 324
              ||||| ||||||||||||||||||
Sbjct: 127000 gatgtaagattaatttttaacaat 126977
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 492    tattgcaaaattagcaaaag 511
              ||||||||||||||||||||
Sbjct: 734837 tattgcaaaattagcaaaag 734856
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 492    tattgcaaaattagcaaaag 511
              ||||||||||||||||||||
Sbjct: 757819 tattgcaaaattagcaaaag 757838
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 492    tattgcaaaattagcaaaag 511
              ||||||||||||||||||||
Sbjct: 834495 tattgcaaaattagcaaaag 834514
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>gb|AC132372.4| Mus musculus BAC clone RP23-478B10 from 8, complete sequence
          Length = 178694

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   ccatccaaaacaaaatggaa 255
             ||||||||||||||||||||
Sbjct: 13973 ccatccaaaacaaaatggaa 13954
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>dbj|AP006370.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT03K19, TM0214,
             complete sequence
          Length = 95881

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   aaaacaaaatggaagggaag 261
             ||||||||||||||||||||
Sbjct: 82655 aaaacaaaatggaagggaag 82636
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>emb|AL845364.4| Mouse DNA sequence from clone RP23-301M3 on chromosome 4, complete
             sequence
          Length = 205273

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   agggaaggatggtaccaagt 274
             ||||||||||||||||||||
Sbjct: 93820 agggaaggatggtaccaagt 93839


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,086,342
Number of Sequences: 3902068
Number of extensions: 7086342
Number of successful extensions: 136964
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 136364
Number of HSP's gapped (non-prelim): 600
length of query: 632
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 609
effective length of database: 17,143,297,704
effective search space: 10440268301736
effective search space used: 10440268301736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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