ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd26a07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ224325.1|HVH224325 Hordeum vulgare cv. Haisa mRNA for cp33... 1162 0.0
2ref|XM_476683.1| Oryza sativa (japonica cultivar-group), mRNA 184 2e-43
3ref|XM_507351.1| PREDICTED Oryza sativa (japonica cultivar-group... 184 2e-43
4ref|XM_506168.2| PREDICTED Oryza sativa (japonica cultivar-group... 184 2e-43
5dbj|AK104773.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
6dbj|AK099188.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
7dbj|AK067376.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 133 8e-28
9dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic D... 133 8e-28
10emb|AJ272011.1|NPL272011 Nicotiana plumbaginifolia mRNA for olig... 48 0.036
11gb|L16679.3| Caenorhabditis elegans cosmid K07D8, complete sequence 46 0.14
12gb|AC006605.1| Caenorhabditis elegans cosmid C07H6, complete seq... 46 0.14
13gb|AC164428.4| Mus musculus BAC clone RP24-150D18 from chromosom... 42 2.2
14gb|AC121861.3| Mus musculus BAC clone RP24-108P23 from chromosom... 42 2.2
15ref|XM_779770.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 2.2
16gb|CP000088.1| Thermobifida fusca YX, complete genome 42 2.2
17gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 2.2
18emb|AL670708.9| Mouse DNA sequence from clone RP23-125A21 on chr... 42 2.2
19ref|XM_511930.1| PREDICTED: Pan troglodytes LOC455180 (LOC455180... 40 8.7
20ref|NM_003110.4| Homo sapiens Sp2 transcription factor (SP2), mRNA 40 8.7
21ref|NM_178005.1| Mus musculus leucine rich repeat transmembrane ... 40 8.7
22gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.7
23gb|BC033814.2| Homo sapiens Sp2 transcription factor, mRNA (cDNA... 40 8.7
24gb|BC016680.2| Homo sapiens Sp2 transcription factor, mRNA (cDNA... 40 8.7
25ref|XM_382202.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 8.7
26ref|XM_571319.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 8.7
27gb|AC121874.2| Mus musculus BAC clone RP24-124K16 from 18, compl... 40 8.7
28gb|AC113025.9| Mus musculus chromosome 6, clone RP23-196D12, com... 40 8.7
29gb|AC107742.10| Mus musculus chromosome 15, clone RP23-331D7, co... 40 8.7
30gb|AC018521.8| Homo sapiens chromosome 17, clone RP11-6N17, comp... 40 8.7
31gb|U38483.1|DCU38483 Dianthus caryophyllus (CEBP-1) mRNA, comple... 40 8.7
32dbj|AK046818.1| Mus musculus 10 days neonate medulla oblongata c... 40 8.7
33dbj|AK049920.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 40 8.7
34emb|BX817526.1|CNS0AEM3 Arabidopsis thaliana Full-length cDNA Co... 40 8.7
35ref|NM_001015654.1| Bos taurus Sp2 transcription factor (SP2), mRNA 40 8.7
36gb|AC136967.1| Papio anubis clone RP41-30N22, complete sequence 40 8.7
37gb|AY893027.1| Synthetic construct Homo sapiens clone FLH119731.... 40 8.7
38gb|AY890560.1| Synthetic construct Homo sapiens clone FLH119735.... 40 8.7
39dbj|D28588.1|HUMKG1D Homo sapiens KIAA0048 mRNA, partial cds 40 8.7
40gb|BC005914.1| Homo sapiens Sp2 transcription factor, mRNA (cDNA... 40 8.7
41gb|BT020830.1| Bos taurus Sp2 transcription factor (SP2), mRNA, ... 40 8.7
42dbj|AK122278.1| Mus musculus mRNA for mKIAA0416 protein 40 8.7
43gb|M97190.1|HUMSP2A Human Sp2 protein mRNA, complete cds 40 8.7 
>emb|AJ224325.1|HVH224325 Hordeum vulgare cv. Haisa mRNA for cp33Hv protein
          Length = 1311

 Score = 1162 bits (586), Expect = 0.0
 Identities = 618/628 (98%), Gaps = 2/628 (0%)
 Strand = Plus / Plus

                                                                        
Query: 13   cgacgatgtccagnataatctatgacaaaatcacagaccggagccgcggcttcgcctttg 72
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450  cgacgatgtccag-ataatctatgacaaaatcacagaccggagccgcggcttcgcctttg 508

                                                                        
Query: 73   tcaccatggccaccgccgaggaggctgccaaggccgtccagatgttcaacggagccctgc 132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509  tcaccatggccaccgccgaggaggctgccaaggccgtccagatgttcaacggagccctgc 568

                                                                        
Query: 133  tgggagggaggacagtcagggtgaatttcccggaagtgccgcgaggaggagaaagggcag 192
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569  tgggagggaggacagtcagggtgaatttcccggaagtgccgcgaggaggagaaagggcag 628

                                                                        
Query: 193  tggcatcggcagcggttgcaaggactagcttgcgtgttgttgacgatgggacatacaagg 252
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629  tggcatcggcagcggttgcaaggactagcttgcgtgttgttgacgatgggacatacaagg 688

                                                                        
Query: 253  tttacgccggcaacctgggttggggtgtgcgggctgacgcactcaagacggcatttgaag 312
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689  tttacgccggcaacctgggttggggtgtgcgggctgacgcactcaagacggcatttgaag 748

                                                                        
Query: 313  ggcagcctggcttggttggtgccagggtaatcttcgagcgtgacaccggtcgttcgaggg 372
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749  ggcagcctggcttggttggtgccagggtaatcttcgagcgtgacaccggtcgttcgaggg 808

                                                                        
Query: 373  ggtttggctttgtctccttccacaccatacaagatgcaaaggctgccttgcaggccatgg 432
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809  ggtttggctttgtctccttccacaccatacaagatgcaaaggctgccttgcaggccatgg 868

                                                                        
Query: 433  acggagtggaactggatgggaggccactccgacttagtctggcagcacagaaccctccag 492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869  acggagtggaactggatgggaggccactccgacttagtctggcagcacagaaccctccag 928

                                                                        
Query: 493  ctggatcaactcctagcacagcgcagtcacagcaagnnnnnnncagcctcacgtggatct 552
            ||||||||||||||||||||||||||||||||||||       |||||||||||||||||
Sbjct: 929  ctggatcaactcctagcacagcgcagtcacagcaag-aaaaaacagcctcacgtggatct 987

                                                                        
Query: 553  gaggctgagccacaggtcgacaataacactagtacttcaggacaatttggaggcgagatg 612
            ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 988  gaggctgagccacaggtcgacaataacactattacttcaggacaatttggaggcgaaatg 1047

                                        
Query: 613  gaaaagagcaacttacaggcaactgcca 640
            ||||||||||||||||||||||||||||
Sbjct: 1048 gaaaagagcaacttacaggcaactgcca 1075
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>ref|XM_476683.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1299

 Score =  184 bits (93), Expect = 2e-43
 Identities = 159/181 (87%)
 Strand = Plus / Plus

                                                                       
Query: 27  ataatctatgacaaaatcacagaccggagccgcggcttcgcctttgtcaccatggccacc 86
           ||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 483 ataatctatgacaaggtcaccgaccggagccgcggcttcgccttcgtcaccatggccacc 542

                                                                       
Query: 87  gccgaggaggctgccaaggccgtccagatgttcaacggagccctgctgggagggaggaca 146
           ||||||||||||||||  ||| ||||||||||||| || |||||||| ||||||||||| 
Sbjct: 543 gccgaggaggctgccaccgccatccagatgttcaatggggccctgcttggagggaggact 602

                                                                       
Query: 147 gtcagggtgaatttcccggaagtgccgcgaggaggagaaagggcagtggcatcggcagcg 206
           |  |||||||| | |||||| |||||||| ||||| || ||||| |||| |||||| |||
Sbjct: 603 gcaagggtgaactacccggaggtgccgcggggaggggagagggcggtgggatcggcggcg 662

            
Query: 207 g 207
           |
Sbjct: 663 g 663



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 212/267 (79%), Gaps = 3/267 (1%)
 Strand = Plus / Plus

                                                                       
Query: 258 gccggcaacctgggttggggtgtgcgggctgacgcactcaagacggcatttgaagggcag 317
           ||||| |||||||| ||||||||||| || || || || | | |||| || || ||||||
Sbjct: 708 gccgggaacctggggtggggtgtgcgtgccgatgctctgagggcggcgttcgaggggcag 767

                                                                       
Query: 318 cctggcttggttggtgccagggtaatcttcgagcgtgacaccggtcgttcgagggggttt 377
           || |||||| ||| ||| ||||| ||||||||||| ||| ||||||| || ||||| || 
Sbjct: 768 cccggcttgcttgatgctagggtcatcttcgagcgcgactccggtcggtccaggggtttc 827

                                                                       
Query: 378 ggctttgtctccttccacaccatacaagatgcaaaggctgccttgcaggccatggacgga 437
           || || |||||||||   ||   | | |||||| ||||||| ||| ||||  |||| |||
Sbjct: 828 ggattcgtctccttcaggactgcagaggatgcacaggctgcattggaggcattggatgga 887

                                                                       
Query: 438 gtggaactggatgggaggccactccgacttagtctggcagcacagaaccctccagctgga 497
           ||||||||||| || ||||||||  | || ||| |||| | |||||||||  ||||||| 
Sbjct: 888 gtggaactggaaggaaggccactgaggctcagtatggcggaacagaacccaacagctggt 947

                                      
Query: 498 tcaactcctagcacagcgcagtcacag 524
           |   |||||||||||| ||||||||||
Sbjct: 948 t---ctcctagcacagtgcagtcacag 971
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>ref|XM_507351.1| PREDICTED Oryza sativa (japonica cultivar-group), P0455F03.24 mRNA
          Length = 1327

 Score =  184 bits (93), Expect = 2e-43
 Identities = 159/181 (87%)
 Strand = Plus / Plus

                                                                       
Query: 27  ataatctatgacaaaatcacagaccggagccgcggcttcgcctttgtcaccatggccacc 86
           ||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 481 ataatctatgacaaggtcaccgaccggagccgcggcttcgccttcgtcaccatggccacc 540

                                                                       
Query: 87  gccgaggaggctgccaaggccgtccagatgttcaacggagccctgctgggagggaggaca 146
           ||||||||||||||||  ||| ||||||||||||| || |||||||| ||||||||||| 
Sbjct: 541 gccgaggaggctgccaccgccatccagatgttcaatggggccctgcttggagggaggact 600

                                                                       
Query: 147 gtcagggtgaatttcccggaagtgccgcgaggaggagaaagggcagtggcatcggcagcg 206
           |  |||||||| | |||||| |||||||| ||||| || ||||| |||| |||||| |||
Sbjct: 601 gcaagggtgaactacccggaggtgccgcggggaggggagagggcggtgggatcggcggcg 660

            
Query: 207 g 207
           |
Sbjct: 661 g 661



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 212/267 (79%), Gaps = 3/267 (1%)
 Strand = Plus / Plus

                                                                       
Query: 258 gccggcaacctgggttggggtgtgcgggctgacgcactcaagacggcatttgaagggcag 317
           ||||| |||||||| ||||||||||| || || || || | | |||| || || ||||||
Sbjct: 706 gccgggaacctggggtggggtgtgcgtgccgatgctctgagggcggcgttcgaggggcag 765

                                                                       
Query: 318 cctggcttggttggtgccagggtaatcttcgagcgtgacaccggtcgttcgagggggttt 377
           || |||||| ||| ||| ||||| ||||||||||| ||| ||||||| || ||||| || 
Sbjct: 766 cccggcttgcttgatgctagggtcatcttcgagcgcgactccggtcggtccaggggtttc 825

                                                                       
Query: 378 ggctttgtctccttccacaccatacaagatgcaaaggctgccttgcaggccatggacgga 437
           || || |||||||||   ||   | | |||||| ||||||| ||| ||||  |||| |||
Sbjct: 826 ggattcgtctccttcaggactgcagaggatgcacaggctgcattggaggcattggatgga 885

                                                                       
Query: 438 gtggaactggatgggaggccactccgacttagtctggcagcacagaaccctccagctgga 497
           ||||||||||| || ||||||||  | || ||| |||| | |||||||||  ||||||| 
Sbjct: 886 gtggaactggaaggaaggccactgaggctcagtatggcggaacagaacccaacagctggt 945

                                      
Query: 498 tcaactcctagcacagcgcagtcacag 524
           |   |||||||||||| ||||||||||
Sbjct: 946 t---ctcctagcacagtgcagtcacag 969
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>ref|XM_506168.2| PREDICTED Oryza sativa (japonica cultivar-group), P0455F03.24 mRNA
          Length = 1390

 Score =  184 bits (93), Expect = 2e-43
 Identities = 159/181 (87%)
 Strand = Plus / Plus

                                                                       
Query: 27  ataatctatgacaaaatcacagaccggagccgcggcttcgcctttgtcaccatggccacc 86
           ||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 498 ataatctatgacaaggtcaccgaccggagccgcggcttcgccttcgtcaccatggccacc 557

                                                                       
Query: 87  gccgaggaggctgccaaggccgtccagatgttcaacggagccctgctgggagggaggaca 146
           ||||||||||||||||  ||| ||||||||||||| || |||||||| ||||||||||| 
Sbjct: 558 gccgaggaggctgccaccgccatccagatgttcaatggggccctgcttggagggaggact 617

                                                                       
Query: 147 gtcagggtgaatttcccggaagtgccgcgaggaggagaaagggcagtggcatcggcagcg 206
           |  |||||||| | |||||| |||||||| ||||| || ||||| |||| |||||| |||
Sbjct: 618 gcaagggtgaactacccggaggtgccgcggggaggggagagggcggtgggatcggcggcg 677

            
Query: 207 g 207
           |
Sbjct: 678 g 678



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 212/267 (79%), Gaps = 3/267 (1%)
 Strand = Plus / Plus

                                                                       
Query: 258 gccggcaacctgggttggggtgtgcgggctgacgcactcaagacggcatttgaagggcag 317
           ||||| |||||||| ||||||||||| || || || || | | |||| || || ||||||
Sbjct: 723 gccgggaacctggggtggggtgtgcgtgccgatgctctgagggcggcgttcgaggggcag 782

                                                                       
Query: 318 cctggcttggttggtgccagggtaatcttcgagcgtgacaccggtcgttcgagggggttt 377
           || |||||| ||| ||| ||||| ||||||||||| ||| ||||||| || ||||| || 
Sbjct: 783 cccggcttgcttgatgctagggtcatcttcgagcgcgactccggtcggtccaggggtttc 842

                                                                       
Query: 378 ggctttgtctccttccacaccatacaagatgcaaaggctgccttgcaggccatggacgga 437
           || || |||||||||   ||   | | |||||| ||||||| ||| ||||  |||| |||
Sbjct: 843 ggattcgtctccttcaggactgcagaggatgcacaggctgcattggaggcattggatgga 902

                                                                       
Query: 438 gtggaactggatgggaggccactccgacttagtctggcagcacagaaccctccagctgga 497
           ||||||||||| || ||||||||  | || ||| |||| | |||||||||  ||||||| 
Sbjct: 903 gtggaactggaaggaaggccactgaggctcagtatggcggaacagaacccaacagctggt 962

                                      
Query: 498 tcaactcctagcacagcgcagtcacag 524
           |   |||||||||||| ||||||||||
Sbjct: 963 t---ctcctagcacagtgcagtcacag 986
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>dbj|AK104773.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-B02, full
           insert sequence
          Length = 1327

 Score =  184 bits (93), Expect = 2e-43
 Identities = 159/181 (87%)
 Strand = Plus / Plus

                                                                       
Query: 27  ataatctatgacaaaatcacagaccggagccgcggcttcgcctttgtcaccatggccacc 86
           ||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 481 ataatctatgacaaggtcaccgaccggagccgcggcttcgccttcgtcaccatggccacc 540

                                                                       
Query: 87  gccgaggaggctgccaaggccgtccagatgttcaacggagccctgctgggagggaggaca 146
           ||||||||||||||||  ||| ||||||||||||| || |||||||| ||||||||||| 
Sbjct: 541 gccgaggaggctgccaccgccatccagatgttcaatggggccctgcttggagggaggact 600

                                                                       
Query: 147 gtcagggtgaatttcccggaagtgccgcgaggaggagaaagggcagtggcatcggcagcg 206
           |  |||||||| | |||||| |||||||| ||||| || ||||| |||| |||||| |||
Sbjct: 601 gcaagggtgaactacccggaggtgccgcggggaggggagagggcggtgggatcggcggcg 660

            
Query: 207 g 207
           |
Sbjct: 661 g 661



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 212/267 (79%), Gaps = 3/267 (1%)
 Strand = Plus / Plus

                                                                       
Query: 258 gccggcaacctgggttggggtgtgcgggctgacgcactcaagacggcatttgaagggcag 317
           ||||| |||||||| ||||||||||| || || || || | | |||| || || ||||||
Sbjct: 706 gccgggaacctggggtggggtgtgcgtgccgatgctctgagggcggcgttcgaggggcag 765

                                                                       
Query: 318 cctggcttggttggtgccagggtaatcttcgagcgtgacaccggtcgttcgagggggttt 377
           || |||||| ||| ||| ||||| ||||||||||| ||| ||||||| || ||||| || 
Sbjct: 766 cccggcttgcttgatgctagggtcatcttcgagcgcgactccggtcggtccaggggtttc 825

                                                                       
Query: 378 ggctttgtctccttccacaccatacaagatgcaaaggctgccttgcaggccatggacgga 437
           || || |||||||||   ||   | | |||||| ||||||| ||| ||||  |||| |||
Sbjct: 826 ggattcgtctccttcaggactgcagaggatgcacaggctgcattggaggcattggatgga 885

                                                                       
Query: 438 gtggaactggatgggaggccactccgacttagtctggcagcacagaaccctccagctgga 497
           ||||||||||| || ||||||||  | || ||| |||| | |||||||||  ||||||| 
Sbjct: 886 gtggaactggaaggaaggccactgaggctcagtatggcggaacagaacccaacagctggt 945

                                      
Query: 498 tcaactcctagcacagcgcagtcacag 524
           |   |||||||||||| ||||||||||
Sbjct: 946 t---ctcctagcacagtgcagtcacag 969
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>dbj|AK099188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110K07, full
           insert sequence
          Length = 1299

 Score =  184 bits (93), Expect = 2e-43
 Identities = 159/181 (87%)
 Strand = Plus / Plus

                                                                       
Query: 27  ataatctatgacaaaatcacagaccggagccgcggcttcgcctttgtcaccatggccacc 86
           ||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 483 ataatctatgacaaggtcaccgaccggagccgcggcttcgccttcgtcaccatggccacc 542

                                                                       
Query: 87  gccgaggaggctgccaaggccgtccagatgttcaacggagccctgctgggagggaggaca 146
           ||||||||||||||||  ||| ||||||||||||| || |||||||| ||||||||||| 
Sbjct: 543 gccgaggaggctgccaccgccatccagatgttcaatggggccctgcttggagggaggact 602

                                                                       
Query: 147 gtcagggtgaatttcccggaagtgccgcgaggaggagaaagggcagtggcatcggcagcg 206
           |  |||||||| | |||||| |||||||| ||||| || ||||| |||| |||||| |||
Sbjct: 603 gcaagggtgaactacccggaggtgccgcggggaggggagagggcggtgggatcggcggcg 662

            
Query: 207 g 207
           |
Sbjct: 663 g 663



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 212/267 (79%), Gaps = 3/267 (1%)
 Strand = Plus / Plus

                                                                       
Query: 258 gccggcaacctgggttggggtgtgcgggctgacgcactcaagacggcatttgaagggcag 317
           ||||| |||||||| ||||||||||| || || || || | | |||| || || ||||||
Sbjct: 708 gccgggaacctggggtggggtgtgcgtgccgatgctctgagggcggcgttcgaggggcag 767

                                                                       
Query: 318 cctggcttggttggtgccagggtaatcttcgagcgtgacaccggtcgttcgagggggttt 377
           || |||||| ||| ||| ||||| ||||||||||| ||| ||||||| || ||||| || 
Sbjct: 768 cccggcttgcttgatgctagggtcatcttcgagcgcgactccggtcggtccaggggtttc 827

                                                                       
Query: 378 ggctttgtctccttccacaccatacaagatgcaaaggctgccttgcaggccatggacgga 437
           || || |||||||||   ||   | | |||||| ||||||| ||| ||||  |||| |||
Sbjct: 828 ggattcgtctccttcaggactgcagaggatgcacaggctgcattggaggcattggatgga 887

                                                                       
Query: 438 gtggaactggatgggaggccactccgacttagtctggcagcacagaaccctccagctgga 497
           ||||||||||| || ||||||||  | || ||| |||| | |||||||||  ||||||| 
Sbjct: 888 gtggaactggaaggaaggccactgaggctcagtatggcggaacagaacccaacagctggt 947

                                      
Query: 498 tcaactcctagcacagcgcagtcacag 524
           |   |||||||||||| ||||||||||
Sbjct: 948 t---ctcctagcacagtgcagtcacag 971
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>dbj|AK067376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106F16, full
           insert sequence
          Length = 1389

 Score =  184 bits (93), Expect = 2e-43
 Identities = 159/181 (87%)
 Strand = Plus / Plus

                                                                       
Query: 27  ataatctatgacaaaatcacagaccggagccgcggcttcgcctttgtcaccatggccacc 86
           ||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 497 ataatctatgacaaggtcaccgaccggagccgcggcttcgccttcgtcaccatggccacc 556

                                                                       
Query: 87  gccgaggaggctgccaaggccgtccagatgttcaacggagccctgctgggagggaggaca 146
           ||||||||||||||||  ||| ||||||||||||| || |||||||| ||||||||||| 
Sbjct: 557 gccgaggaggctgccaccgccatccagatgttcaatggggccctgcttggagggaggact 616

                                                                       
Query: 147 gtcagggtgaatttcccggaagtgccgcgaggaggagaaagggcagtggcatcggcagcg 206
           |  |||||||| | |||||| |||||||| ||||| || ||||| |||| |||||| |||
Sbjct: 617 gcaagggtgaactacccggaggtgccgcggggaggggagagggcggtgggatcggcggcg 676

            
Query: 207 g 207
           |
Sbjct: 677 g 677



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 212/267 (79%), Gaps = 3/267 (1%)
 Strand = Plus / Plus

                                                                       
Query: 258 gccggcaacctgggttggggtgtgcgggctgacgcactcaagacggcatttgaagggcag 317
           ||||| |||||||| ||||||||||| || || || || | | |||| || || ||||||
Sbjct: 722 gccgggaacctggggtggggtgtgcgtgccgatgctctgagggcggcgttcgaggggcag 781

                                                                       
Query: 318 cctggcttggttggtgccagggtaatcttcgagcgtgacaccggtcgttcgagggggttt 377
           || |||||| ||| ||| ||||| ||||||||||| ||| ||||||| || ||||| || 
Sbjct: 782 cccggcttgcttgatgctagggtcatcttcgagcgcgactccggtcggtccaggggtttc 841

                                                                       
Query: 378 ggctttgtctccttccacaccatacaagatgcaaaggctgccttgcaggccatggacgga 437
           || || |||||||||   ||   | | |||||| ||||||| ||| ||||  |||| |||
Sbjct: 842 ggattcgtctccttcaggactgcagaggatgcacaggctgcattggaggcattggatgga 901

                                                                       
Query: 438 gtggaactggatgggaggccactccgacttagtctggcagcacagaaccctccagctgga 497
           ||||||||||| || ||||||||  | || ||| |||| | |||||||||  ||||||| 
Sbjct: 902 gtggaactggaaggaaggccactgaggctcagtatggcggaacagaacccaacagctggt 961

                                      
Query: 498 tcaactcctagcacagcgcagtcacag 524
           |   |||||||||||| ||||||||||
Sbjct: 962 t---ctcctagcacagtgcagtcacag 985
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                           
Query: 27      ataatctatgacaaaatcacagaccggagccgcggcttcgcctttgtcaccatggccacc 86
               ||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 3156163 ataatctatgacaaggtcaccgaccggagccgcggcttcgccttcgtcaccatggccacc 3156104

                                                  
Query: 87      gccgaggaggctgccaaggccgtccagatgttcaa 121
               ||||||||||||||||  ||| |||||||||||||
Sbjct: 3156103 gccgaggaggctgccaccgccatccagatgttcaa 3156069



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 110/135 (81%)
 Strand = Plus / Minus

                                                                           
Query: 258     gccggcaacctgggttggggtgtgcgggctgacgcactcaagacggcatttgaagggcag 317
               ||||| |||||||| ||||||||||| || || || || | | |||| || || ||||||
Sbjct: 3155810 gccgggaacctggggtggggtgtgcgtgccgatgctctgagggcggcgttcgaggggcag 3155751

                                                                           
Query: 318     cctggcttggttggtgccagggtaatcttcgagcgtgacaccggtcgttcgagggggttt 377
               || |||||| ||| ||| ||||| ||||||||||| ||| ||||||| || ||||| || 
Sbjct: 3155750 cccggcttgcttgatgctagggtcatcttcgagcgcgactccggtcggtccaggggtttc 3155691

                              
Query: 378     ggctttgtctccttc 392
               || || |||||||||
Sbjct: 3155690 ggattcgtctccttc 3155676



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 66/79 (83%)
 Strand = Plus / Minus

                                                                           
Query: 129     ctgctgggagggaggacagtcagggtgaatttcccggaagtgccgcgaggaggagaaagg 188
               ||||| ||||||||||| |  |||||||| | |||||| |||||||| ||||| || |||
Sbjct: 3155933 ctgcttggagggaggactgcaagggtgaactacccggaggtgccgcggggaggggagagg 3155874

                                  
Query: 189     gcagtggcatcggcagcgg 207
               || |||| |||||| ||||
Sbjct: 3155873 gcggtgggatcggcggcgg 3155855
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>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0455F03
          Length = 158201

 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                         
Query: 27    ataatctatgacaaaatcacagaccggagccgcggcttcgcctttgtcaccatggccacc 86
             ||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 71153 ataatctatgacaaggtcaccgaccggagccgcggcttcgccttcgtcaccatggccacc 71094

                                                
Query: 87    gccgaggaggctgccaaggccgtccagatgttcaa 121
             ||||||||||||||||  ||| |||||||||||||
Sbjct: 71093 gccgaggaggctgccaccgccatccagatgttcaa 71059



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 110/135 (81%)
 Strand = Plus / Minus

                                                                         
Query: 258   gccggcaacctgggttggggtgtgcgggctgacgcactcaagacggcatttgaagggcag 317
             ||||| |||||||| ||||||||||| || || || || | | |||| || || ||||||
Sbjct: 70800 gccgggaacctggggtggggtgtgcgtgccgatgctctgagggcggcgttcgaggggcag 70741

                                                                         
Query: 318   cctggcttggttggtgccagggtaatcttcgagcgtgacaccggtcgttcgagggggttt 377
             || |||||| ||| ||| ||||| ||||||||||| ||| ||||||| || ||||| || 
Sbjct: 70740 cccggcttgcttgatgctagggtcatcttcgagcgcgactccggtcggtccaggggtttc 70681

                            
Query: 378   ggctttgtctccttc 392
             || || |||||||||
Sbjct: 70680 ggattcgtctccttc 70666



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 66/79 (83%)
 Strand = Plus / Minus

                                                                         
Query: 129   ctgctgggagggaggacagtcagggtgaatttcccggaagtgccgcgaggaggagaaagg 188
             ||||| ||||||||||| |  |||||||| | |||||| |||||||| ||||| || |||
Sbjct: 70923 ctgcttggagggaggactgcaagggtgaactacccggaggtgccgcggggaggggagagg 70864

                                
Query: 189   gcagtggcatcggcagcgg 207
             || |||| |||||| ||||
Sbjct: 70863 gcggtgggatcggcggcgg 70845
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>emb|AJ272011.1|NPL272011 Nicotiana plumbaginifolia mRNA for oligouridylate binding protein
           (ubp1 gene)
          Length = 1668

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 366 tcgagggggtttggctttgtctccttcc 393
           |||||||||||||| |||||||||||||
Sbjct: 698 tcgagggggtttggatttgtctccttcc 725
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>gb|L16679.3| Caenorhabditis elegans cosmid K07D8, complete sequence
          Length = 14407

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 175   gaggaggagaaagggcagtggca 197
             |||||||||||||||||||||||
Sbjct: 12287 gaggaggagaaagggcagtggca 12309
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>gb|AC006605.1| Caenorhabditis elegans cosmid C07H6, complete sequence
          Length = 55169

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 175  gaggaggagaaagggcagtggca 197
            |||||||||||||||||||||||
Sbjct: 8193 gaggaggagaaagggcagtggca 8215
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>gb|AC164428.4| Mus musculus BAC clone RP24-150D18 from chromosome 1, complete sequence
          Length = 170692

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 435   ggagtggaactggatgggagg 455
             |||||||||||||||||||||
Sbjct: 40240 ggagtggaactggatgggagg 40260
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>gb|AC121861.3| Mus musculus BAC clone RP24-108P23 from chromosome 1, complete sequence
          Length = 185558

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 435   ggagtggaactggatgggagg 455
             |||||||||||||||||||||
Sbjct: 67367 ggagtggaactggatgggagg 67347
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>ref|XM_779770.1| PREDICTED: Strongylocentrotus purpuratus similar to Nuclear
           receptor ROR-alpha (Nuclear receptor RZR-alpha)
           (LOC579666), partial mRNA
          Length = 3311

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 431 ggacggagtggaactggatgg 451
           |||||||||||||||||||||
Sbjct: 241 ggacggagtggaactggatgg 221
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 85     ccgccgaggaggctgccaagg 105
              |||||||||||||||||||||
Sbjct: 949921 ccgccgaggaggctgccaagg 949941
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 63      ttcgcctttgtcaccatggcc 83
               |||||||||||||||||||||
Sbjct: 3403490 ttcgcctttgtcaccatggcc 3403470
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>emb|AL670708.9| Mouse DNA sequence from clone RP23-125A21 on chromosome 4, complete
              sequence
          Length = 207097

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 435    ggagtggaactggatgggagg 455
              |||||||||||||||||||||
Sbjct: 127600 ggagtggaactggatgggagg 127580
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>ref|XM_511930.1| PREDICTED: Pan troglodytes LOC455180 (LOC455180), mRNA
          Length = 2712

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 tggcttggttggtgccaggg 339
           ||||||||||||||||||||
Sbjct: 172 tggcttggttggtgccaggg 153
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>ref|NM_003110.4| Homo sapiens Sp2 transcription factor (SP2), mRNA
          Length = 3031

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 tggcttggttggtgccaggg 339
           ||||||||||||||||||||
Sbjct: 510 tggcttggttggtgccaggg 491
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>ref|NM_178005.1| Mus musculus leucine rich repeat transmembrane neuronal 2 (Lrrtm2),
            mRNA
          Length = 3660

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 384  gtctccttccacaccataca 403
            ||||||||||||||||||||
Sbjct: 3248 gtctccttccacaccataca 3229
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>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete
              sequence
          Length = 1438950

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 91     aggaggctgccaaggccgtccaga 114
              ||||||||||||||| ||||||||
Sbjct: 554701 aggaggctgccaaggtcgtccaga 554678
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>gb|BC033814.2| Homo sapiens Sp2 transcription factor, mRNA (cDNA clone MGC:45308
           IMAGE:5208525), complete cds
          Length = 3031

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 tggcttggttggtgccaggg 339
           ||||||||||||||||||||
Sbjct: 510 tggcttggttggtgccaggg 491
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>gb|BC016680.2| Homo sapiens Sp2 transcription factor, mRNA (cDNA clone MGC:21349
           IMAGE:4338754), complete cds
          Length = 2876

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 tggcttggttggtgccaggg 339
           ||||||||||||||||||||
Sbjct: 526 tggcttggttggtgccaggg 507
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>ref|XM_382202.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02026.1)
           partial mRNA
          Length = 5715

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 480 cagaaccctccagctggatc 499
           ||||||||||||||||||||
Sbjct: 877 cagaaccctccagctggatc 896
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>ref|XM_571319.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNF01900) partial mRNA
          Length = 491

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 91  aggaggctgccaaggccgtccaga 114
           ||||||||||||||| ||||||||
Sbjct: 92  aggaggctgccaaggtcgtccaga 115
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>gb|AC121874.2| Mus musculus BAC clone RP24-124K16 from 18, complete sequence
          Length = 164190

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   gtctccttccacaccataca 403
             ||||||||||||||||||||
Sbjct: 82448 gtctccttccacaccataca 82429
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>gb|AC113025.9| Mus musculus chromosome 6, clone RP23-196D12, complete sequence
          Length = 223925

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 441    gaactggatgggaggccact 460
              ||||||||||||||||||||
Sbjct: 176819 gaactggatgggaggccact 176800
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>gb|AC107742.10| Mus musculus chromosome 15, clone RP23-331D7, complete sequence
          Length = 223952

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 603    aggcgagatggaaaagagca 622
              ||||||||||||||||||||
Sbjct: 124339 aggcgagatggaaaagagca 124320
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>gb|AC018521.8| Homo sapiens chromosome 17, clone RP11-6N17, complete sequence
          Length = 143494

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   tggcttggttggtgccaggg 339
             ||||||||||||||||||||
Sbjct: 80651 tggcttggttggtgccaggg 80670
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>gb|U38483.1|DCU38483 Dianthus caryophyllus (CEBP-1) mRNA, complete cds
          Length = 1217

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 60  ggcttcgcctttgtcaccatggcc 83
           ||||||| ||||||||||||||||
Sbjct: 836 ggcttcggctttgtcaccatggcc 859
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>dbj|AK046818.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN
            full-length enriched library, clone:B830014K09
            product:KIAA0416 PROTEIN homolog [Homo sapiens], full
            insert sequence
          Length = 3463

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 384  gtctccttccacaccataca 403
            ||||||||||||||||||||
Sbjct: 3249 gtctccttccacaccataca 3230
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>dbj|AK049920.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched
            library, clone:C630011A14 product:hypothetical RNI-like
            structure containing protein, full insert sequence
          Length = 3660

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 384  gtctccttccacaccataca 403
            ||||||||||||||||||||
Sbjct: 3248 gtctccttccacaccataca 3229
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>emb|BX817526.1|CNS0AEM3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL28ZH10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 451

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 176 aggaggagaaagggcagtgg 195
           ||||||||||||||||||||
Sbjct: 249 aggaggagaaagggcagtgg 268
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>ref|NM_001015654.1| Bos taurus Sp2 transcription factor (SP2), mRNA
          Length = 2592

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 tggcttggttggtgccaggg 339
           ||||||||||||||||||||
Sbjct: 580 tggcttggttggtgccaggg 561
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>gb|AC136967.1| Papio anubis clone RP41-30N22, complete sequence
          Length = 194730

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    gcgaggaggagaaagggcag 192
              ||||||||||||||||||||
Sbjct: 177329 gcgaggaggagaaagggcag 177348
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>gb|AY893027.1| Synthetic construct Homo sapiens clone FLH119731.01L Sp2
           transcription factor (SP2) mRNA, partial cds
          Length = 1821

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 tggcttggttggtgccaggg 339
           ||||||||||||||||||||
Sbjct: 475 tggcttggttggtgccaggg 456
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>gb|AY890560.1| Synthetic construct Homo sapiens clone FLH119735.01X Sp2
           transcription factor (SP2) mRNA, complete cds
          Length = 1821

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 tggcttggttggtgccaggg 339
           ||||||||||||||||||||
Sbjct: 475 tggcttggttggtgccaggg 456
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>dbj|D28588.1|HUMKG1D Homo sapiens KIAA0048 mRNA, partial cds
          Length = 3288

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 tggcttggttggtgccaggg 339
           ||||||||||||||||||||
Sbjct: 809 tggcttggttggtgccaggg 790
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>gb|BC005914.1| Homo sapiens Sp2 transcription factor, mRNA (cDNA clone
           IMAGE:4095335), complete cds
          Length = 1848

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 tggcttggttggtgccaggg 339
           ||||||||||||||||||||
Sbjct: 536 tggcttggttggtgccaggg 517
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>gb|BT020830.1| Bos taurus Sp2 transcription factor (SP2), mRNA, complete cds
          Length = 2592

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 tggcttggttggtgccaggg 339
           ||||||||||||||||||||
Sbjct: 580 tggcttggttggtgccaggg 561
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>dbj|AK122278.1| Mus musculus mRNA for mKIAA0416 protein
          Length = 5650

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 384  gtctccttccacaccataca 403
            ||||||||||||||||||||
Sbjct: 3339 gtctccttccacaccataca 3320
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>gb|M97190.1|HUMSP2A Human Sp2 protein mRNA, complete cds
          Length = 2063

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 tggcttggttggtgccaggg 339
           ||||||||||||||||||||
Sbjct: 508 tggcttggttggtgccaggg 489


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,551,480
Number of Sequences: 3902068
Number of extensions: 4551480
Number of successful extensions: 89369
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89157
Number of HSP's gapped (non-prelim): 198
length of query: 640
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 617
effective length of database: 17,143,297,704
effective search space: 10577414683368
effective search space used: 10577414683368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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