ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd25l05 |
|---|---|
| Clone Library Name | barley_pub |
>DGAT1_HUMAN (O75907) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)| (Diglyceride acyltransferase) (ACAT-related gene product 1) Length = 488 Score = 90.5 bits (223), Expect = 2e-18 Identities = 59/179 (32%), Positives = 89/179 (49%), Gaps = 8/179 (4%) Frame = +1 Query: 1 GLFNLCIVVLVAVNGRLIIENLMKYGLLIRTGFWFNSRSLRD---WPLLMCCLSLPAFPL 171 G+ N C+V+L+ N RL +ENL+KYG+L+ S L+D WP ++ F + Sbjct: 87 GILNWCVVMLILSNARLFLENLIKYGILV-DPIQVVSLFLKDPYSWPAPCLVIAANVFAV 145 Query: 172 GAFSVEKLAFRNVITDAVATCLHIILTTTEIVYPVLVILMCDSAVVSGFLLMFIA-CIVW 348 AF VEK +T+ LH+ T + +P V+L+ +S G LL +A I++ Sbjct: 146 AAFQVEKRLAVGALTEQAGLLLHVANLATILCFPAAVVLLVESITPVGSLLALMAHTILF 205 Query: 349 LKLVSFAHTNHDIR----QLTISGKKVDYAPSTDDMDNLQAPTLGSLVYFMMAPTLCYQ 513 LKL S+ N R + +GKK A + + T L YF+ APTLCY+ Sbjct: 206 LKLFSYRDVNSWCRRARAKAASAGKKASSAAAPHTVSYPDNLTYRDLYYFLFAPTLCYE 264
>DGAT1_CERAE (Q9GMF1) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)| (Diglyceride acyltransferase) Length = 491 Score = 88.2 bits (217), Expect = 1e-17 Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 8/179 (4%) Frame = +1 Query: 1 GLFNLCIVVLVAVNGRLIIENLMKYGLLIRTGFWFNSRSLRD---WPLLMCCLSLPAFPL 171 G+ N C+V+L+ N RL +ENL+KYG+L+ S L+D WP ++ F + Sbjct: 90 GILNWCVVMLILSNARLFLENLIKYGILV-DPIQVVSLFLKDPYSWPAPCLVIAANVFAV 148 Query: 172 GAFSVEKLAFRNVITDAVATCLHIILTTTEIVYPVLVILMCDSAVVSGFLL-MFIACIVW 348 AF VEK +T+ LH+ T + +P V+L+ +S G LL + + I++ Sbjct: 149 AAFQVEKRLAVGALTEQAGLLLHVANLATILCFPAAVVLLVESITPVGSLLALMVHTILF 208 Query: 349 LKLVSFAHTNHDIR----QLTISGKKVDYAPSTDDMDNLQAPTLGSLVYFMMAPTLCYQ 513 LKL S+ N R + +GK+ A + + T L YF+ APTLCY+ Sbjct: 209 LKLFSYRDVNLWCRRARAKAASAGKRASSAAAPHTVSYPDNLTYRDLYYFLFAPTLCYE 267
>DGAT1_MOUSE (Q9Z2A7) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)| (Diglyceride acyltransferase) Length = 498 Score = 87.4 bits (215), Expect = 2e-17 Identities = 58/181 (32%), Positives = 90/181 (49%), Gaps = 10/181 (5%) Frame = +1 Query: 1 GLFNLCIVVLVAVNGRLIIENLMKYGLLIRTGFWFNSRSLRD---WPLLMCCLSLPAFPL 171 G+ N C+V+L+ N RL +ENL+KYG+L+ S L+D WP ++ F + Sbjct: 96 GILNWCVVMLILSNARLFLENLIKYGILV-DPIQVVSLFLKDPYSWPAPCVIIASNIFVV 154 Query: 172 GAFSVEKLAFRNVITDAVATCLHIILTTTEIVYPVLVILMCDSAVVSGFLLMFIA-CIVW 348 AF +EK +T+ + LH++ T I +P V L+ +S G + + I++ Sbjct: 155 AAFQIEKRLAVGALTEQMGLLLHVVNLATIICFPAAVALLVESITPVGSVFALASYSIMF 214 Query: 349 LKLVSFAHTNHDIRQLTI------SGKKVDYAPSTDDMDNLQAPTLGSLVYFMMAPTLCY 510 LKL S+ N RQ + +GKKV A + + T L YF+ APTLCY Sbjct: 215 LKLYSYRDVNLWCRQRRVKAKAVSTGKKVSGAAAQQAVSYPDNLTYRDLYYFIFAPTLCY 274 Query: 511 Q 513 + Sbjct: 275 E 275
>DGAT1_RAT (Q9ERM3) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)| (Diglyceride acyltransferase) Length = 498 Score = 87.0 bits (214), Expect = 3e-17 Identities = 58/181 (32%), Positives = 90/181 (49%), Gaps = 10/181 (5%) Frame = +1 Query: 1 GLFNLCIVVLVAVNGRLIIENLMKYGLLIRTGFWFNSRSLRD---WPLLMCCLSLPAFPL 171 G+ N C+V+L+ N RL +ENL+KYG+L+ S L+D WP ++ F + Sbjct: 96 GILNWCVVMLILSNARLSLENLIKYGILV-DPIQVVSLFLKDPYSWPAPCLIIASNIFIV 154 Query: 172 GAFSVEKLAFRNVITDAVATCLHIILTTTEIVYPVLVILMCDSAVVSGFLLMFIA-CIVW 348 F +EK +T+ + LH++ T I +P V L+ +S G L + I++ Sbjct: 155 ATFQIEKRLSVGALTEQMGLLLHVVNLATIICFPAAVALLVESITPVGSLFALASYSIIF 214 Query: 349 LKLVSFAHTNHDIRQLTI------SGKKVDYAPSTDDMDNLQAPTLGSLVYFMMAPTLCY 510 LKL S+ N RQ + +GKKV A + + + T L YF+ APTLCY Sbjct: 215 LKLSSYRDVNLWCRQRRVKAKAVSAGKKVSGAAAQNTVSYPDNLTYRDLYYFIFAPTLCY 274 Query: 511 Q 513 + Sbjct: 275 E 275
>SOAT1_MOUSE (Q61263) Sterol O-acyltransferase 1 (EC 2.3.1.26) (Cholesterol| acyltransferase 1) (Acyl coenzyme A:cholesterol acyltransferase 1) (ACAT-1) Length = 540 Score = 32.0 bits (71), Expect = 1.0 Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 5/175 (2%) Frame = +1 Query: 4 LFNLCIVVLVAVN-GRLIIE-NLMKYGL-LIRTGFWFNSRSLRDWPLLMCCLSLPAFPLG 174 LF L +V+ ++ GRL++E NL+ Y T W W + + LS+P F Sbjct: 141 LFVLSTIVVDYIDEGRLVLEFNLLAYAFGKFPTVIW------TWWAMFLSTLSIPYFLFQ 194 Query: 175 AFSVE-KLAFRNVITDAVATCLHIILTTTEIVY-PVLVILMCDSAVVSGFLLMFIACIVW 348 ++ + +I V L ++ + + P V+L S F+L+ + Sbjct: 195 PWAHGYSKSSHPLIYSLVHGLLFLVFQLGVLGFVPTYVVLAYTLPPASRFILILEQIRLI 254 Query: 349 LKLVSFAHTNHDIRQLTISGKKVDYAPSTDDMDNLQAPTLGSLVYFMMAPTLCYQ 513 +K SF N R L + +K P PT+ +YF+ APTL Y+ Sbjct: 255 MKAHSFVRENIP-RVLNAAKEKSSKDP---------LPTVNQYLYFLFAPTLIYR 299
>SOAT1_CRIGR (Q60457) Sterol O-acyltransferase 1 (EC 2.3.1.26) (Cholesterol| acyltransferase 1) (Acyl coenzyme A:cholesterol acyltransferase 1) (ACAT-1) Length = 546 Score = 30.8 bits (68), Expect = 2.3 Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 5/175 (2%) Frame = +1 Query: 4 LFNLCIVVLVAVN-GRLIIE-NLMKYGL-LIRTGFWFNSRSLRDWPLLMCCLSLPAFPLG 174 LF L +V+ ++ GRL++E NL+ Y + T W W + + LS+P F Sbjct: 147 LFILSTLVVDYIDEGRLVLEFNLLGYAFGKLPTVIW------TWWAMFLSTLSIPYFLFQ 200 Query: 175 AFSVEKLAFRNVITDAVATCLHIILTTTEIV--YPVLVILMCDSAVVSGFLLMFIACIVW 348 ++ + + +++ ++ I+ P V+L S F+++ + Sbjct: 201 RWAHGYSKTSHPLIYSLSHGFFFLVFQLGILGFVPTYVVLAYTLPPASRFIVILEQIRMV 260 Query: 349 LKLVSFAHTNHDIRQLTISGKKVDYAPSTDDMDNLQAPTLGSLVYFMMAPTLCYQ 513 +K SF N R L + +K P PT+ +YF+ APTL Y+ Sbjct: 261 MKAHSFVRENVP-RVLNAAKEKSSTVP---------VPTVNQYLYFLFAPTLIYR 305
>POLG_HCVBK (P26663) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3009 Score = 30.8 bits (68), Expect = 2.3 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +1 Query: 1 GLFNLCIVVLVAVNGRLIIENLMKYGLLIRTGFWFNSRSLRDWP 132 GL + C++V G + MK G L T + + LRDWP Sbjct: 916 GLIHACMLVRKVAGGHYVQMAFMKLGALTGTYIYNHLTPLRDWP 959
>SRD48_CAEEL (O17822) Serpentine receptor class delta-48 (Protein srd-48)| Length = 316 Score = 30.4 bits (67), Expect = 3.0 Identities = 12/28 (42%), Positives = 22/28 (78%) Frame = +2 Query: 188 KSWRSVMLLLMLWLPVFISFLQQLKLYI 271 +++R V+++LML LP+FI+ + Q+ L I Sbjct: 122 QNYRKVVIILMLLLPIFITMVAQIDLMI 149
>FRDD_YERPE (Q8ZIX8) Fumarate reductase subunit D (Fumarate reductase 13 kDa| hydrophobic protein) Length = 118 Score = 29.6 bits (65), Expect = 5.1 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +1 Query: 280 VILMCDSAVVSGFLLMFIACIVWLKLVSFAHTNHDIRQLTISGKKVDY 423 ++ C S + FLL+ I +W L H HD++ +GK V Y Sbjct: 54 ILAFCQSFIGRVFLLLMIILPLWCGLHRIHHAMHDLKIHVPAGKWVFY 101
>NAH_SCHPO (P36606) Na(+)/H(+) antiporter| Length = 468 Score = 29.6 bits (65), Expect = 5.1 Identities = 16/63 (25%), Positives = 32/63 (50%) Frame = +1 Query: 175 AFSVEKLAFRNVITDAVATCLHIILTTTEIVYPVLVILMCDSAVVSGFLLMFIACIVWLK 354 AF + L + I ++ + T EI++P++ ++ S +V GF + + ++W K Sbjct: 379 AFLAKLLLSPDEIEKSIYESTTVFSTLNEIIWPIISFVILSSIIVHGFSIHVL--VIWGK 436 Query: 355 LVS 363 L S Sbjct: 437 LKS 439
>XKR7_PANTR (Q49LS1) XK-related protein 7| Length = 579 Score = 29.6 bits (65), Expect = 5.1 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%) Frame = +1 Query: 91 TGFWFNSRSLRD--WPLLMCCLSLPAFPLGAF 180 TGFW++SR+ + L+M C+ +F LG F Sbjct: 399 TGFWYSSRNFSTDFYSLIMVCVVASSFALGIF 430
>XKR7_HUMAN (Q5GH72) XK-related protein 7| Length = 579 Score = 29.6 bits (65), Expect = 5.1 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%) Frame = +1 Query: 91 TGFWFNSRSLRD--WPLLMCCLSLPAFPLGAF 180 TGFW++SR+ + L+M C+ +F LG F Sbjct: 399 TGFWYSSRNFSTDFYSLIMVCVVASSFALGIF 430
>SOAT1_MACFA (O77761) Sterol O-acyltransferase 1 (EC 2.3.1.26) (Cholesterol| acyltransferase 1) (Acyl coenzyme A:cholesterol acyltransferase 1) (ACAT-1) Length = 550 Score = 29.3 bits (64), Expect = 6.7 Identities = 23/81 (28%), Positives = 34/81 (41%) Frame = +1 Query: 271 PVLVILMCDSAVVSGFLLMFIACIVWLKLVSFAHTNHDIRQLTISGKKVDYAPSTDDMDN 450 P V+L S F+++F +K SF N R L + +K P Sbjct: 239 PTYVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENVP-RVLNSAKEKSSTVP------- 290 Query: 451 LQAPTLGSLVYFMMAPTLCYQ 513 PT+ +YF+ APTL Y+ Sbjct: 291 --IPTVNQYLYFLFAPTLIYR 309
>SOAT1_HUMAN (P35610) Sterol O-acyltransferase 1 (EC 2.3.1.26) (Cholesterol| acyltransferase 1) (Acyl coenzyme A:cholesterol acyltransferase 1) (ACAT-1) Length = 550 Score = 29.3 bits (64), Expect = 6.7 Identities = 23/81 (28%), Positives = 34/81 (41%) Frame = +1 Query: 271 PVLVILMCDSAVVSGFLLMFIACIVWLKLVSFAHTNHDIRQLTISGKKVDYAPSTDDMDN 450 P V+L S F+++F +K SF N R L + +K P Sbjct: 239 PTYVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENVP-RVLNSAKEKSSTVP------- 290 Query: 451 LQAPTLGSLVYFMMAPTLCYQ 513 PT+ +YF+ APTL Y+ Sbjct: 291 --IPTVNQYLYFLFAPTLIYR 309
>SOAT1_CERAE (O77760) Sterol O-acyltransferase 1 (EC 2.3.1.26) (Cholesterol| acyltransferase 1) (Acyl coenzyme A:cholesterol acyltransferase 1) (ACAT-1) Length = 550 Score = 29.3 bits (64), Expect = 6.7 Identities = 23/81 (28%), Positives = 34/81 (41%) Frame = +1 Query: 271 PVLVILMCDSAVVSGFLLMFIACIVWLKLVSFAHTNHDIRQLTISGKKVDYAPSTDDMDN 450 P V+L S F+++F +K SF N R L + +K P Sbjct: 239 PTYVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENVP-RVLNSAKEKSSTVP------- 290 Query: 451 LQAPTLGSLVYFMMAPTLCYQ 513 PT+ +YF+ APTL Y+ Sbjct: 291 --IPTVNQYLYFLFAPTLIYR 309
>SOAT2_CERAE (O77759) Sterol O-acyltransferase 2 (EC 2.3.1.26) (Cholesterol| acyltransferase 2) (Acyl coenzyme A:cholesterol acyltransferase 2) (ACAT-2) Length = 526 Score = 28.9 bits (63), Expect = 8.7 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +1 Query: 445 DNLQAPTLGSLVYFMMAPTLCYQ 513 + +QAP+ S +YF+ PTL Y+ Sbjct: 265 EGIQAPSFSSYLYFLFCPTLIYR 287
>MRAY_CHLCH (Q3ANV6) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC| 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase) Length = 368 Score = 28.9 bits (63), Expect = 8.7 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = +2 Query: 176 HFQLKSWRSVMLLLMLWLPVFISFLQQL 259 HFQLK W +++ W+ + FL L Sbjct: 335 HFQLKGWAEQKIVIRFWIMAILFFLASL 362
>SOAT2_HUMAN (O75908) Sterol O-acyltransferase 2 (EC 2.3.1.26) (Cholesterol| acyltransferase 2) (Acyl coenzyme A:cholesterol acyltransferase 2) (ACAT-2) Length = 522 Score = 28.9 bits (63), Expect = 8.7 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +1 Query: 445 DNLQAPTLGSLVYFMMAPTLCYQ 513 + +QAP+ S +YF+ PTL Y+ Sbjct: 261 EGIQAPSFSSYLYFLFCPTLIYR 283 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,139,113 Number of Sequences: 219361 Number of extensions: 1353445 Number of successful extensions: 3904 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 3808 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3894 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
