| Clone Name | basd25k19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF287276.1|AF287276 Hordeum vulgare chlorophyll a/b-binding protein precursor (Lhca4) mRNA, partial cds; nuclear gene for chloroplast product Length = 687 Score = 950 bits (479), Expect = 0.0 Identities = 479/479 (100%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 268 Query: 67 tgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacct 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 tgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacct 328 Query: 127 acttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgaga 186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 acttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgaga 388 Query: 187 tccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaaga 246 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 tccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaaga 448 Query: 247 gctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaact 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 gctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaact 508 Query: 307 tcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctgg 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 tcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctgg 568 Query: 367 cgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgc 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 cgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgc 628 Query: 427 agcagcacctggccgacccatggcacaacaccatcatccagaccatctccggccaataa 485 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 agcagcacctggccgacccatggcacaacaccatcatccagaccatctccggccaataa 687
>gb|S68729.1| LHC Ib-20=light-harvesting complex I [Hordeum vulgare=barley, Prato, mRNA Chloroplast, 939 nt] Length = 939 Score = 603 bits (304), Expect = e-169 Identities = 324/330 (98%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 176 ctacgtcgagatccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccc 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 ctacgtcgagatccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccc 449 Query: 236 catcttcaagagctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaa 295 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 450 catcttcaagagctacagcctcccgccccacgagtgcggctaccccggcagagtcttcaa 509 Query: 296 ccccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagact 355 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 510 ccccctcaacttcgccccc---ctcgagaacaaggagaaggagctcgccaacgggagact 566 Query: 356 ggccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgtt 415 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 567 ggccatgctggcgttcctggggttcctggtgcagcacaacgtgcacgggaaggggccgtt 626 Query: 416 cgagaacctgcagcagcacctggccgacccatggcacaacaccatcatccagaccatctc 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 cgagaacctgcagcagcacctggccgacccatggcacaacaccatcatccagaccatctc 686 Query: 476 cggccaataaatccgtcgatttcaccgacc 505 |||||||||||||||||||||||||||||| Sbjct: 687 cggccaataaatccgtcgatttcaccgacc 716 Score = 216 bits (109), Expect = 5e-53 Identities = 140/145 (96%), Gaps = 4/145 (2%) Strand = Plus / Plus Query: 13 tggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 tggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctga 286 Query: 73 ccaaggcggggctgctgaacgcgcccgagtgg-tacgac-gcc-ggcaaggagacctact 129 |||||||||||||| ||||||||||||||||| |||||| ||| |||||||||||||||| Sbjct: 287 ccaaggcggggctgatgaacgcgcccgagtggttacgactgccaggcaaggagacctact 346 Query: 130 tcgcctcctcctccac-gctcttcg 153 |||||||||||||||| |||||||| Sbjct: 347 tcgcctcctcctccactgctcttcg 371
>ref|XM_482572.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1070 Score = 585 bits (295), Expect = e-164 Identities = 421/463 (90%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||||||||||||||||||||||||||||||||||| ||||||||| | || |||| Sbjct: 325 cggagctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgagg 384 Query: 67 tgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacct 126 ||||||| ||| ||| || | ||||||| ||||||||||||||||||||| |||| Sbjct: 385 tgctgacgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacct 444 Query: 127 acttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgaga 186 ||||||| || || || ||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 445 acttcgcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggaga 504 Query: 187 tccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaaga 246 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 505 tccggcggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaaga 564 Query: 247 gctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaact 306 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 gctacagcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaact 624 Query: 307 tcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctgg 366 ||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 625 tcgagcccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctgg 684 Query: 367 cgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgc 426 ||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 685 cgttcttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgc 744 Query: 427 agcagcacctggccgacccatggcacaacaccatcatccagac 469 |||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 745 tgcagcacctgtctgacccgtggcacaacaccatcatccagac 787
>ref|XM_507585.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1138 Score = 585 bits (295), Expect = e-164 Identities = 421/463 (90%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||||||||||||||||||||||||||||||||||| ||||||||| | || |||| Sbjct: 329 cggagctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgagg 388 Query: 67 tgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacct 126 ||||||| ||| ||| || | ||||||| ||||||||||||||||||||| |||| Sbjct: 389 tgctgacgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacct 448 Query: 127 acttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgaga 186 ||||||| || || || ||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 449 acttcgcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggaga 508 Query: 187 tccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaaga 246 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 509 tccggcggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaaga 568 Query: 247 gctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaact 306 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 gctacagcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaact 628 Query: 307 tcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctgg 366 ||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 629 tcgagcccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctgg 688 Query: 367 cgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgc 426 ||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 689 cgttcttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgc 748 Query: 427 agcagcacctggccgacccatggcacaacaccatcatccagac 469 |||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 749 tgcagcacctgtctgacccgtggcacaacaccatcatccagac 791
>ref|XM_507584.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1138 Score = 585 bits (295), Expect = e-164 Identities = 421/463 (90%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||||||||||||||||||||||||||||||||||| ||||||||| | || |||| Sbjct: 329 cggagctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgagg 388 Query: 67 tgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacct 126 ||||||| ||| ||| || | ||||||| ||||||||||||||||||||| |||| Sbjct: 389 tgctgacgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacct 448 Query: 127 acttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgaga 186 ||||||| || || || ||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 449 acttcgcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggaga 508 Query: 187 tccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaaga 246 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 509 tccggcggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaaga 568 Query: 247 gctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaact 306 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 gctacagcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaact 628 Query: 307 tcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctgg 366 ||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 629 tcgagcccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctgg 688 Query: 367 cgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgc 426 ||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 689 cgttcttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgc 748 Query: 427 agcagcacctggccgacccatggcacaacaccatcatccagac 469 |||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 749 tgcagcacctgtctgacccgtggcacaacaccatcatccagac 791
>ref|XM_507583.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1178 Score = 585 bits (295), Expect = e-164 Identities = 421/463 (90%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||||||||||||||||||||||||||||||||||| ||||||||| | || |||| Sbjct: 326 cggagctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgagg 385 Query: 67 tgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacct 126 ||||||| ||| ||| || | ||||||| ||||||||||||||||||||| |||| Sbjct: 386 tgctgacgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacct 445 Query: 127 acttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgaga 186 ||||||| || || || ||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 446 acttcgcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggaga 505 Query: 187 tccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaaga 246 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 506 tccggcggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaaga 565 Query: 247 gctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaact 306 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 566 gctacagcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaact 625 Query: 307 tcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctgg 366 ||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 626 tcgagcccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctgg 685 Query: 367 cgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgc 426 ||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 686 cgttcttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgc 745 Query: 427 agcagcacctggccgacccatggcacaacaccatcatccagac 469 |||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 746 tgcagcacctgtctgacccgtggcacaacaccatcatccagac 788
>ref|XM_507582.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1188 Score = 585 bits (295), Expect = e-164 Identities = 421/463 (90%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||||||||||||||||||||||||||||||||||| ||||||||| | || |||| Sbjct: 325 cggagctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgagg 384 Query: 67 tgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacct 126 ||||||| ||| ||| || | ||||||| ||||||||||||||||||||| |||| Sbjct: 385 tgctgacgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacct 444 Query: 127 acttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgaga 186 ||||||| || || || ||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 445 acttcgcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggaga 504 Query: 187 tccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaaga 246 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 505 tccggcggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaaga 564 Query: 247 gctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaact 306 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 gctacagcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaact 624 Query: 307 tcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctgg 366 ||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 625 tcgagcccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctgg 684 Query: 367 cgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgc 426 ||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 685 cgttcttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgc 744 Query: 427 agcagcacctggccgacccatggcacaacaccatcatccagac 469 |||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 745 tgcagcacctgtctgacccgtggcacaacaccatcatccagac 787
>ref|XM_507239.2| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1191 Score = 585 bits (295), Expect = e-164 Identities = 421/463 (90%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||||||||||||||||||||||||||||||||||| ||||||||| | || |||| Sbjct: 328 cggagctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgagg 387 Query: 67 tgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacct 126 ||||||| ||| ||| || | ||||||| ||||||||||||||||||||| |||| Sbjct: 388 tgctgacgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacct 447 Query: 127 acttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgaga 186 ||||||| || || || ||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 448 acttcgcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggaga 507 Query: 187 tccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaaga 246 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 508 tccggcggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaaga 567 Query: 247 gctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaact 306 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 gctacagcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaact 627 Query: 307 tcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctgg 366 ||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 628 tcgagcccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctgg 687 Query: 367 cgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgc 426 ||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 688 cgttcttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgc 747 Query: 427 agcagcacctggccgacccatggcacaacaccatcatccagac 469 |||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 748 tgcagcacctgtctgacccgtggcacaacaccatcatccagac 790
>dbj|AK104499.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E04, full insert sequence Length = 1140 Score = 585 bits (295), Expect = e-164 Identities = 421/463 (90%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||||||||||||||||||||||||||||||||||| ||||||||| | || |||| Sbjct: 329 cggagctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgagg 388 Query: 67 tgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacct 126 ||||||| ||| ||| || | ||||||| ||||||||||||||||||||| |||| Sbjct: 389 tgctgacgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacct 448 Query: 127 acttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgaga 186 ||||||| || || || ||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 449 acttcgcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggaga 508 Query: 187 tccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaaga 246 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 509 tccggcggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaaga 568 Query: 247 gctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaact 306 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 gctacagcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaact 628 Query: 307 tcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctgg 366 ||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 629 tcgagcccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctgg 688 Query: 367 cgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgc 426 ||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 689 cgttcttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgc 748 Query: 427 agcagcacctggccgacccatggcacaacaccatcatccagac 469 |||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 749 tgcagcacctgtctgacccgtggcacaacaccatcatccagac 791
>dbj|AK104416.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G03, full insert sequence Length = 1177 Score = 585 bits (295), Expect = e-164 Identities = 421/463 (90%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||||||||||||||||||||||||||||||||||| ||||||||| | || |||| Sbjct: 326 cggagctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgagg 385 Query: 67 tgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacct 126 ||||||| ||| ||| || | ||||||| ||||||||||||||||||||| |||| Sbjct: 386 tgctgacgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacct 445 Query: 127 acttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgaga 186 ||||||| || || || ||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 446 acttcgcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggaga 505 Query: 187 tccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaaga 246 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 506 tccggcggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaaga 565 Query: 247 gctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaact 306 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 566 gctacagcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaact 625 Query: 307 tcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctgg 366 ||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 626 tcgagcccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctgg 685 Query: 367 cgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgc 426 ||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 686 cgttcttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgc 745 Query: 427 agcagcacctggccgacccatggcacaacaccatcatccagac 469 |||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 746 tgcagcacctgtctgacccgtggcacaacaccatcatccagac 788
>dbj|AK067712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120A20, full insert sequence Length = 1138 Score = 585 bits (295), Expect = e-164 Identities = 421/463 (90%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||||||||||||||||||||||||||||||||||| ||||||||| | || |||| Sbjct: 329 cggagctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgagg 388 Query: 67 tgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacct 126 ||||||| ||| ||| || | ||||||| ||||||||||||||||||||| |||| Sbjct: 389 tgctgacgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacct 448 Query: 127 acttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgaga 186 ||||||| || || || ||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 449 acttcgcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggaga 508 Query: 187 tccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaaga 246 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 509 tccggcggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaaga 568 Query: 247 gctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaact 306 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 gctacagcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaact 628 Query: 307 tcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctgg 366 ||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 629 tcgagcccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctgg 688 Query: 367 cgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgc 426 ||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 689 cgttcttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgc 748 Query: 427 agcagcacctggccgacccatggcacaacaccatcatccagac 469 |||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 749 tgcagcacctgtctgacccgtggcacaacaccatcatccagac 791
>dbj|AK060222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F08, full insert sequence Length = 1078 Score = 585 bits (295), Expect = e-164 Identities = 421/463 (90%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||||||||||||||||||||||||||||||||||| ||||||||| | || |||| Sbjct: 334 cggagctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgagg 393 Query: 67 tgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacct 126 ||||||| ||| ||| || | ||||||| ||||||||||||||||||||| |||| Sbjct: 394 tgctgacgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacct 453 Query: 127 acttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgaga 186 ||||||| || || || ||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 454 acttcgcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggaga 513 Query: 187 tccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaaga 246 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 514 tccggcggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaaga 573 Query: 247 gctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaact 306 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 gctacagcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaact 633 Query: 307 tcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctgg 366 ||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 634 tcgagcccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctgg 693 Query: 367 cgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgc 426 ||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 694 cgttcttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgc 753 Query: 427 agcagcacctggccgacccatggcacaacaccatcatccagac 469 |||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 754 tgcagcacctgtctgacccgtggcacaacaccatcatccagac 796
>dbj|AK067809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121A03, full insert sequence Length = 1190 Score = 577 bits (291), Expect = e-161 Identities = 417/459 (90%) Strand = Plus / Plus Query: 11 gctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgct 70 |||||||||||||||||||||||||||||||||||| ||||||||| | || |||||||| Sbjct: 331 gctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgct 390 Query: 71 gaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctactt 130 ||| ||| ||| || | ||||||| ||||||||||||||||||||| |||||||| Sbjct: 391 gacgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctactt 450 Query: 131 cgcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccg 190 ||| || || || ||||| |||||||||||||||||||| ||||||||||| |||||||| Sbjct: 451 cgcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggagatccg 510 Query: 191 gcggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagcta 250 |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 511 gcggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagcta 570 Query: 251 cagcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgc 310 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 571 cagcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcga 630 Query: 311 ccccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgtt 370 |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 631 gcccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgtt 690 Query: 371 cctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagca 430 | |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| ||| Sbjct: 691 cttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgca 750 Query: 431 gcacctggccgacccatggcacaacaccatcatccagac 469 ||||||| | ||||| ||||||||||||||||||||||| Sbjct: 751 gcacctgtctgacccgtggcacaacaccatcatccagac 789
>dbj|AK103921.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B07, full insert sequence Length = 1193 Score = 561 bits (283), Expect = e-157 Identities = 418/463 (90%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||||||||||||||||||||||||||||||||||| ||||||||| | || |||| Sbjct: 330 cggagctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgagg 389 Query: 67 tgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacct 126 ||||||| ||| ||| || | ||||||| ||||||||||| ||||||||| |||| Sbjct: 390 tgctgacgaagatcgggttgatcgacgcgccacagtggtacgacaccggcaaggccacct 449 Query: 127 acttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgaga 186 ||||||| || || || ||||| ||||||||||||||||||| ||||||||||| |||| Sbjct: 450 acttcgcgtcgtcgtcgacgctgttcgtcatcgagttcatcccgttccactacgtggaga 509 Query: 187 tccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaaga 246 ||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||| Sbjct: 510 tccggcggtggcaggacatcaaggaccctggctgcgtcaaccaggaccccatcttcaaga 569 Query: 247 gctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaact 306 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 gctacagcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaact 629 Query: 307 tcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctgg 366 ||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 630 tcgagcccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctgg 689 Query: 367 cgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgc 426 ||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 690 cgttcttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgc 749 Query: 427 agcagcacctggccgacccatggcacaacaccatcatccagac 469 |||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 750 tgcagcacctgtctgacccgtggcacaacaccatcatccagac 792
>ref|XM_482573.1| Oryza sativa (japonica cultivar-group), mRNA Length = 576 Score = 559 bits (282), Expect = e-156 Identities = 415/458 (90%), Gaps = 1/458 (0%) Strand = Plus / Minus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||||||||||||||||||||||||||||||||||| ||||||||| | || |||| Sbjct: 458 cggagctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgagg 399 Query: 67 tgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacct 126 ||||||| ||| ||| || | ||||||| ||||||||||||||||||||| |||| Sbjct: 398 tgctgacgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacct 339 Query: 127 acttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgaga 186 ||||||| || || || ||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 338 acttcgcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggaga 279 Query: 187 tccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaaga 246 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 278 tccggcggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaaga 219 Query: 247 gctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaact 306 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 218 gctacagcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaact 159 Query: 307 tcgcccccaccctcgagaacaaggagaaggagctcgccaac-gggagactggccatgctg 365 ||| |||||||||||| |||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 158 tcgagcccaccctcgaggccaaggagaaggagctcgccaacagggaggctggcgatgctg 99 Query: 366 gcgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctg 425 |||||| |||||||||||||||||||||||||||| ||||||||| ||||| |||||| Sbjct: 98 gcgttcttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctg 39 Query: 426 cagcagcacctggccgacccatggcacaacaccatcat 463 | |||||||||| | ||||| ||||||||||||||||| Sbjct: 38 ctgcagcacctgtctgacccgtggcacaacaccatcat 1
>gb|AY445626.2| Oryza sativa (japonica cultivar-group) chlorophyll a/b binding protein presusor mRNA, complete cds; nuclear gene for chloroplast product Length = 1128 Score = 555 bits (280), Expect = e-155 Identities = 420/464 (90%), Gaps = 2/464 (0%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||||||||||||||||||||||||||||||||||| ||||||||| | || |||| Sbjct: 305 cggagctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgagg 364 Query: 67 tgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacct 126 ||||||| ||| ||| || | ||||||| ||||||||||||||||||||| |||| Sbjct: 365 tgctgacgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacct 424 Query: 127 acttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgaga 186 ||||||| || || || ||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 425 acttcgcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggaga 484 Query: 187 tccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaaga 246 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 485 tccggcggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaaga 544 Query: 247 gctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaa-ccccctcaac 305 |||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 545 gctacagcctcccgccgcacgagtgcggcta-cccggcagcgtcttcaacccccctcaac 603 Query: 306 ttcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctg 365 |||| |||||||||||| ||||||||||||||||||||||||||| ||||| |||||| Sbjct: 604 ttcgagcccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctg 663 Query: 366 gcgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctg 425 |||||| |||||||||||||||||||||||||||| ||||||||| ||||| |||||| Sbjct: 664 gcgttcttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctg 723 Query: 426 cagcagcacctggccgacccatggcacaacaccatcatccagac 469 | |||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 724 ctgcagcacctgtctgacccgtggcacaacaccatcatccagac 767
>gb|AF094775.1|AF094775 Oryza sativa chlorophyll a/b-binding protein presursor (Cab27) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1162 Score = 529 bits (267), Expect = e-147 Identities = 414/463 (89%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||||||||||||||||||||||||||||||||||| ||||||||| | || |||| Sbjct: 292 cggagctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgagg 351 Query: 67 tgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacct 126 ||||||| ||| ||| || | ||||||| ||||||||||||||||||||| |||| Sbjct: 352 tgctgacgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacct 411 Query: 127 acttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgaga 186 ||||||| || || |||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 412 acttcgcgtcgtcgaacacgctgttcgtcatcgagttcatcctgttccactacgtggaga 471 Query: 187 tccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaaga 246 |||| | ||||||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 472 tccgccagtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaaga 531 Query: 247 gctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaact 306 ||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 532 gctacagactccccagcgacgagtgcggctaccccggcagcgtcttcaaccccctcaact 591 Query: 307 tcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctgg 366 ||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 592 tcgagcccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctgg 651 Query: 367 cgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgc 426 ||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct: 652 cgttcttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgc 711 Query: 427 agcagcacctggccgacccatggcacaacaccatcatccagac 469 |||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 712 tgcagcacctgtctgacccgtggcacaacaccatcatccagac 754
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 442 bits (223), Expect = e-121 Identities = 313/343 (91%) Strand = Plus / Minus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||||||||||||||||||||||||||||||||||| ||||||||| | || |||| Sbjct: 21164993 cggagctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgagg 21164934 Query: 67 tgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacct 126 ||||||| ||| ||| || | ||||||| ||||||||||||||||||||| |||| Sbjct: 21164933 tgctgacgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacct 21164874 Query: 127 acttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgaga 186 ||||||| || || || ||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 21164873 acttcgcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggaga 21164814 Query: 187 tccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaaga 246 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 21164813 tccggcggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaaga 21164754 Query: 247 gctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaact 306 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21164753 gctacagcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaact 21164694 Query: 307 tcgcccccaccctcgagaacaaggagaaggagctcgccaacgg 349 ||| |||||||||||| |||||||||||||||||||||||| Sbjct: 21164693 tcgagcccaccctcgaggccaaggagaaggagctcgccaacgg 21164651 Score = 147 bits (74), Expect = 4e-32 Identities = 110/122 (90%) Strand = Plus / Minus Query: 348 gggagactggccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaag 407 ||||| ||||| |||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 21164559 gggaggctggcgatgctggcgttcttggggttcctggtgcagcacaacgtgacgcagaag 21164500 Query: 408 gggccgttcgagaacctgcagcagcacctggccgacccatggcacaacaccatcatccag 467 ||||| ||||| ||||||| |||||||||| | ||||| ||||||||||||||||||||| Sbjct: 21164499 gggcccttcgacaacctgctgcagcacctgtctgacccgtggcacaacaccatcatccag 21164440 Query: 468 ac 469 || Sbjct: 21164439 ac 21164438
>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0413H11 Length = 147655 Score = 442 bits (223), Expect = e-121 Identities = 313/343 (91%) Strand = Plus / Minus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||||||||||||||||||||||||||||||||||| ||||||||| | || |||| Sbjct: 136203 cggagctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgagg 136144 Query: 67 tgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacct 126 ||||||| ||| ||| || | ||||||| ||||||||||||||||||||| |||| Sbjct: 136143 tgctgacgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacct 136084 Query: 127 acttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgaga 186 ||||||| || || || ||||| |||||||||||||||||||| ||||||||||| |||| Sbjct: 136083 acttcgcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggaga 136024 Query: 187 tccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaaga 246 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 136023 tccggcggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaaga 135964 Query: 247 gctacagcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaact 306 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135963 gctacagcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaact 135904 Query: 307 tcgcccccaccctcgagaacaaggagaaggagctcgccaacgg 349 ||| |||||||||||| |||||||||||||||||||||||| Sbjct: 135903 tcgagcccaccctcgaggccaaggagaaggagctcgccaacgg 135861 Score = 147 bits (74), Expect = 4e-32 Identities = 110/122 (90%) Strand = Plus / Minus Query: 348 gggagactggccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaag 407 ||||| ||||| |||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 135769 gggaggctggcgatgctggcgttcttggggttcctggtgcagcacaacgtgacgcagaag 135710 Query: 408 gggccgttcgagaacctgcagcagcacctggccgacccatggcacaacaccatcatccag 467 ||||| ||||| ||||||| |||||||||| | ||||| ||||||||||||||||||||| Sbjct: 135709 gggcccttcgacaacctgctgcagcacctgtctgacccgtggcacaacaccatcatccag 135650 Query: 468 ac 469 || Sbjct: 135649 ac 135648
>emb|Z17226.1|PSLHCA411 Pinus sylvestris Lhca4*1-1 gene encoding Lhca4 protein (type 4 protein of light-harvesting complex of photosystem I) Length = 1013 Score = 89.7 bits (45), Expect = 8e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||| ||||||||| |||||||||||||||| |||||||||||||| |||||||| | Sbjct: 282 cggagctagtgaacgggaggtgggcgatgctgggcgtggcggggatgcttatcccggaag 341 Query: 67 tgctgacca 75 |||| |||| Sbjct: 342 tgctaacca 350 Score = 87.7 bits (44), Expect = 3e-14 Identities = 140/172 (81%) Strand = Plus / Plus Query: 289 tcttcaaccccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaacg 348 |||||||||| ||||||||| |||| || | ||| ||||||||||||||||||||| | Sbjct: 564 tcttcaaccctctcaacttctccccatccatggaggccaaggagaaggagctcgccaatg 623 Query: 349 ggagactggccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaagg 408 ||||| |||| ||| | || |||||||| || | ||||| ||||| || || || |||| Sbjct: 624 ggagattggcaatgttagcattcctgggatttgtagtgcaacacaatgtaacaggaaagg 683 Query: 409 ggccgttcgagaacctgcagcagcacctggccgacccatggcacaacaccat 460 | |||||||| ||| ||| ||| || ||| | || ||||||||||||||||| Sbjct: 684 gcccgttcgacaacttgctgcaacatctgtctgatccatggcacaacaccat 735
>emb|Z16409.1|PSLHCA412 P.sylvestris Lhca4*1-2 mRNA encoding Lhca4 protein (type 4 protein of light-harvesting complex of photosystem I) (partial) Length = 968 Score = 87.7 bits (44), Expect = 3e-14 Identities = 140/172 (81%) Strand = Plus / Plus Query: 289 tcttcaaccccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaacg 348 |||||||||| ||||||||| |||| || | ||| ||||||||||||||||||||| | Sbjct: 541 tcttcaaccctctcaacttctccccatccatggaggccaaggagaaggagctcgccaatg 600 Query: 349 ggagactggccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaagg 408 ||||| |||| ||| | || |||||||| || | ||||| ||||| || || || |||| Sbjct: 601 ggagattggcaatgttagcattcctgggatttgtagtgcaacacaatgtaacaggaaagg 660 Query: 409 ggccgttcgagaacctgcagcagcacctggccgacccatggcacaacaccat 460 | |||||||| ||| ||| ||| || ||| | || ||||||||||||||||| Sbjct: 661 gcccgttcgacaacttgctgcaacatctgtctgatccatggcacaacaccat 712 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||| ||||||||| | |||||||||||||| |||||||||||||| |||||||| | Sbjct: 259 cggagctagtgaacgggagatgggcgatgctgggcgtggcggggatgcttatcccggaag 318 Query: 67 tgctgacca 75 |||| |||| Sbjct: 319 tgctaacca 327
>emb|X82497.1|NTCAG4 N.tabacum mRNA for light-harvesting Ch1 a/b binding protein Length = 726 Score = 85.7 bits (43), Expect = 1e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 141 tccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcag 200 ||||| || ||||| |||||||||||| | |||||||||||||||||| | ||||||| Sbjct: 262 tccaccctgttcgtgatcgagttcatcttgttccactacgtcgagatcagaaggtggcaa 321 Query: 201 gacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctacagc 254 |||||||||||||| || || ||||| | |||||||||||||| ||||||| Sbjct: 322 gacatcaagaacccaggaagtgttaaccaagnccccatcttcaagaactacagc 375 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 ccgacccatggcacaacaccat 460 |||||||||||||||||||||| Sbjct: 560 ccgacccatggcacaacaccat 581
>emb|X57706.1|LECAB11 L.esculentum DNA for CAB11 gene Length = 1393 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 384 gtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgac 443 ||||||||||| ||||| |||||||| || || || ||||| | ||||||||| | ||| Sbjct: 1110 gtgcagcacaatgtgactgggaagggaccttttgacaaccttctgcagcacctctctgac 1169 Query: 444 ccatggcacaacaccatcatcca 466 ||||||||||||||||||||||| Sbjct: 1170 ccatggcacaacaccatcatcca 1192 Score = 77.8 bits (39), Expect = 3e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 156 atcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaagaacccg 215 |||||||||||| | |||||||||||||||||| | ||||||| ||||| |||||||| Sbjct: 805 atcgagttcatcttgttccactacgtcgagatcagaaggtggcaagacattaagaaccca 864 Query: 216 ggctccgtcaaccaggaccccatcttcaagagctacagc 254 || |||||||| ||||| |||||||||| ||||||| Sbjct: 865 ggaagtgtcaaccaagaccctatcttcaagaactacagc 903
>emb|AJ309094.1|PPI309094 Pinus pinaster mRNA for putative chlorophyll a/b-binding protein type 4 Length = 819 Score = 75.8 bits (38), Expect = 1e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||| ||||||||| | |||||||||||||| ||||||||||||| |||||||| | Sbjct: 290 cggagctagtgaacgggagatgggcgatgctgggcgtggcggggatgcntatcccggaag 349 Query: 67 tgctgacca 75 |||| |||| Sbjct: 350 tgctaacca 358 Score = 71.9 bits (36), Expect = 2e-09 Identities = 138/172 (80%) Strand = Plus / Plus Query: 289 tcttcaaccccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaacg 348 |||||||||| ||||||||| |||| || | ||| ||||||||||||||| ||||| | Sbjct: 572 tcttcaacccgctcaacttctccccatccatggaggccaaggagaaggagcttgccaatg 631 Query: 349 ggagactggccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaagg 408 |||| |||| ||| | || |||||||| || | ||||| ||||| || || || |||| Sbjct: 632 ggaggttggcaatgttagcattcctgggatttgtagtgcaacacaatgtaacaggaaagg 691 Query: 409 ggccgttcgagaacctgcagcagcacctggccgacccatggcacaacaccat 460 | |||||||| ||| ||| ||| || ||| | || ||||||||||||||||| Sbjct: 692 gcccgttcgacaacttgctgcaacatctgtctgatccatggcacaacaccat 743
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||| || || | |||||||||||||||| |||||||||||| ||| ||||||||| Sbjct: 16234242 cggagctgatgcacagccggtgggcgatgctggcggtggcggggatcctggtcccggagg 16234301 Query: 67 tgctg 71 ||||| Sbjct: 16234302 tgctg 16234306
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||| || || | |||||||||||||||| |||||||||||| ||| ||||||||| Sbjct: 50758 cggagctgatgcacagccggtgggcgatgctggcggtggcggggatcctggtcccggagg 50817 Query: 67 tgctg 71 ||||| Sbjct: 50818 tgctg 50822
>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556H01 Length = 149800 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||| || || | |||||||||||||||| |||||||||||| ||| ||||||||| Sbjct: 138843 cggagctgatgcacagccggtgggcgatgctggcggtggcggggatcctggtcccggagg 138902 Query: 67 tgctg 71 ||||| Sbjct: 138903 tgctg 138907
>dbj|AK067780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114F21, full insert sequence Length = 919 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 |||||||| || || | |||||||||||||||| |||||||||||| ||| ||||||||| Sbjct: 365 cggagctgatgcacagccggtgggcgatgctggcggtggcggggatcctggtcccggagg 424 Query: 67 tgctg 71 ||||| Sbjct: 425 tgctg 429
>emb|AJ579711.2|BVU579711 Beta vulgaris mRNA for chloroplast chlorophyll a/b binding protein (cab11 gene) Length = 1062 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 326 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 385 ||||||||||||||| || || |||||| |||| ||| |||| ||| | || ||| | || Sbjct: 714 caaggagaaggagcttgctaatgggagattggcaatgttggcattcttaggattcattgt 773 Query: 386 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 445 ||| ||||| ||||| || |||||||| || || ||||| | |||||| || | ||||| Sbjct: 774 gcaacacaatgtgactggaaaggggccttttgataaccttctgcagcatctatcagaccc 833 Query: 446 atggcacaacaccatcatccagac 469 ||||||||||||||| || ||||| Sbjct: 834 atggcacaacaccattattcagac 857 Score = 48.1 bits (24), Expect = 0.028 Identities = 48/56 (85%) Strand = Plus / Plus Query: 159 gagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaagaaccc 214 ||||||||| | |||||||| || ||||| || | |||||||||||||||||||| Sbjct: 547 gagttcatcttattccactatgtggagataaggagatggcaggacatcaagaaccc 602 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Plus Query: 9 gagctggtgaacgggcggtgggcgatgctgggggtggc 46 |||||||||||||| || ||||| ||||| |||||||| Sbjct: 397 gagctggtgaacggccgatgggcaatgctaggggtggc 434
>gb|BC002118.1| Mus musculus cDNA clone MGC:6623 IMAGE:3491066, complete cds Length = 1008 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Plus Query: 326 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 385 ||||||||||||||| || || |||||| |||| ||| |||| ||| | || ||| | || Sbjct: 630 caaggagaaggagcttgctaatgggagattggcaatgttggcattcttaggattcattgt 689 Query: 386 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 445 ||| ||||| ||||| || |||||||| || || ||||| | |||||| || | ||||| Sbjct: 690 gcaacacaatgtgactggaaaggggccttttgataaccttctgcagcatctatcagaccc 749 Query: 446 atggcacaacaccatcatccagac 469 ||||||||||||||| || ||||| Sbjct: 750 atggcacaacaccattattcagac 773 Score = 48.1 bits (24), Expect = 0.028 Identities = 48/56 (85%) Strand = Plus / Plus Query: 159 gagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaagaaccc 214 ||||||||| | |||||||| || ||||| || | |||||||||||||||||||| Sbjct: 463 gagttcatcttattccactatgtggagataaggagatggcaggacatcaagaaccc 518 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Plus Query: 9 gagctggtgaacgggcggtgggcgatgctgggggtggc 46 |||||||||||||| || ||||| ||||| |||||||| Sbjct: 313 gagctggtgaacggccgatgggcaatgctaggggtggc 350
>gb|AY233205.1| Vitis vinifera chlorophyll a/b-binding protein (Lhca1) mRNA, partial cds; nuclear gene for chloroplast product Length = 476 Score = 65.9 bits (33), Expect = 1e-07 Identities = 213/273 (78%) Strand = Plus / Plus Query: 194 gtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctacag 253 ||||||||||||||||||||| || || |||||||| ||||| ||||||| |||||| Sbjct: 1 gtggcaggacatcaagaacccaggaagtgtgaaccaggatcccattttcaagaactacag 60 Query: 254 cctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgcccc 313 | | || ||| | ||| || |||||||| | | ||||||||||| ||||| || || Sbjct: 61 cttacctcccaatgaggtgggttaccccggtggtattttcaaccccctgaactttgcacc 120 Query: 314 caccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttcct 373 || ||| |||||| ||||| || || ||||||||| | || ||| |||| ||||| Sbjct: 121 aactgaggaggccaaggaaaaggaacttgctaacgggagattagcaatgttggcattcct 180 Query: 374 ggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagca 433 |||||| | || || ||||||||||| || || ||||| || || ||||| |||||| Sbjct: 181 ggggtttattgttcaacacaacgtgactggaaaagggccatttgacaacctcttgcagca 240 Query: 434 cctggccgacccatggcacaacaccatcatcca 466 | | | |||||||||||||||||||||||||| Sbjct: 241 catctcagacccatggcacaacaccatcatcca 273
>gb|AF359128.1| Pinus sylvestris plus tree E1101 LHC I type IV chlorophyll binding protein (LHCA4) gene, partial cds; nuclear gene for chloroplast product Length = 498 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 32 gatgctgggggtggcggggatgctgatcccggaggtgctgacca 75 ||||||||| |||||||||||||| |||||||| ||||| |||| Sbjct: 4 gatgctgggcgtggcggggatgcttatcccggaagtgctaacca 47 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 289 tcttcaaccccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaa 346 |||||||||| ||||||||| |||| || | ||| ||||||||||||||||||||| Sbjct: 261 tcttcaaccctctcaacttctccccatccatggaggccaaggagaaggagctcgccaa 318
>gb|AF359127.1| Pinus sylvestris plus tree E635C LHC I type IV chlorophyll binding protein (LHCA4) gene, partial cds; nuclear gene for chloroplast product Length = 521 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 32 gatgctgggggtggcggggatgctgatcccggaggtgctgacca 75 ||||||||| |||||||||||||| |||||||| ||||| |||| Sbjct: 4 gatgctgggcgtggcggggatgcttatcccggaagtgctaacca 47 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 289 tcttcaaccccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaa 346 |||||||||| ||||||||| |||| || | ||| ||||||||||||||||||||| Sbjct: 261 tcttcaaccctctcaacttctccccatccatggaggccaaggagaaggagctcgccaa 318
>ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1062 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 322 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 381 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 382 tcctgaccaag 392
>ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1059 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 323 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 382 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 383 tcctgaccaag 393
>ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1058 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 325 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 384 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 385 tcctgaccaag 395
>ref|XM_478841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1047 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 328 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 387 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 388 tcctgaccaag 398
>ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1061 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 328 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 387 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 388 tcctgaccaag 398
>ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1065 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 329 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 388 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 389 tcctgaccaag 399
>ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1069 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 329 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 388 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 389 tcctgaccaag 399
>ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1068 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 332 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 391 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 392 tcctgaccaag 402
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 23304727 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 23304786 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 23304787 tcctgaccaag 23304797
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 59985 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 60044 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 60045 tcctgaccaag 60055
>dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F08, full insert sequence Length = 1088 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 343 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 402 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 403 tcctgaccaag 413
>emb|X84308.1|HVLHCA2 H.vulgare mRNA for photosysteme I antenna protein Length = 1050 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||| ||| Sbjct: 352 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccagagc 411 Query: 67 tgctgaccaag 77 ||||||||||| Sbjct: 412 tgctgaccaag 422
>emb|X79277.1|LTLHAB L.temulentum lhaB mRNA Length = 1026 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | |||||||||||||| || | ||||||||| | ||||||||| Sbjct: 308 cggagctggtgcactgccggtgggcgatgcttggagcggcggggatcttcatcccggagc 367 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 368 tcctgaccaag 378
>dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B06, full insert sequence Length = 1069 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 329 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 388 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 389 tcctgaccaag 399
>dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C01, full insert sequence Length = 1065 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 329 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 388 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 389 tcctgaccaag 399
>dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-H09, full insert sequence Length = 1080 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 359 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 418 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 419 tcctgaccaag 429
>dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D02, full insert sequence Length = 1058 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 325 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 384 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 385 tcctgaccaag 395
>dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E10, full insert sequence Length = 1061 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 328 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 387 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 388 tcctgaccaag 398
>dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G05, full insert sequence Length = 1062 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 322 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 381 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 382 tcctgaccaag 392
>dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H03, full insert sequence Length = 1059 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 323 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 382 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 383 tcctgaccaag 393
>dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040A06, full insert sequence Length = 1646 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 510 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 569 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 570 tcctgaccaag 580
>dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C01, full insert sequence Length = 1068 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | ||||||||||||||||| | |||||| || | ||||||||| Sbjct: 332 cggagctggtgcactgccggtgggcgatgctgggcgcggcgggcatcttcatcccggagt 391 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 392 tcctgaccaag 402
>dbj|AB122117.1| Chlamydomonas reinhardtii LhcI-4 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1970 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 87 ctgaacgcgcccgagtggtacgacgccggcaagg 120 ||||||| ||| |||||||||||||||||||||| Sbjct: 835 ctgaacgtgcctgagtggtacgacgccggcaagg 868
>ref|NM_114615.3| Arabidopsis thaliana CAB4; chlorophyll binding AT3G47470 (CAB4) mRNA, complete cds Length = 1266 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 150 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 209 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 687 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 746 Query: 210 aaccc 214 ||||| Sbjct: 747 aaccc 751 Score = 48.1 bits (24), Expect = 0.028 Identities = 105/132 (79%) Strand = Plus / Plus Query: 326 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 385 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 863 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 922 Query: 386 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 445 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 923 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 982 Query: 446 atggcacaacac 457 |||||||||||| Sbjct: 983 atggcacaacac 994
>gb|BT000093.1| Arabidopsis thaliana chlorophyll A-B binding protein 4 precursor homolog (At3g47470) mRNA, complete cds Length = 891 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 150 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 209 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 427 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 486 Query: 210 aaccc 214 ||||| Sbjct: 487 aaccc 491 Score = 48.1 bits (24), Expect = 0.028 Identities = 105/132 (79%) Strand = Plus / Plus Query: 326 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 385 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 603 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 662 Query: 386 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 445 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 663 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 722 Query: 446 atggcacaacac 457 |||||||||||| Sbjct: 723 atggcacaacac 734
>emb|AL132955.1|ATF1P2 Arabidopsis thaliana DNA chromosome 3, BAC clone F1P2 Length = 101154 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Minus Query: 150 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 209 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 7389 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 7330 Query: 210 aaccc 214 ||||| Sbjct: 7329 aaccc 7325
>gb|AY093080.1| Arabidopsis thaliana chlorophyll A-B binding protein 4 precursor homolog (At3g47470) mRNA, complete cds Length = 1055 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 150 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 209 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 527 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 586 Query: 210 aaccc 214 ||||| Sbjct: 587 aaccc 591 Score = 48.1 bits (24), Expect = 0.028 Identities = 105/132 (79%) Strand = Plus / Plus Query: 326 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 385 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 703 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 762 Query: 386 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 445 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 763 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 822 Query: 446 atggcacaacac 457 |||||||||||| Sbjct: 823 atggcacaacac 834
>gb|AF325012.2|AF325012 Arabidopsis thaliana AT3g47470 (AT3g47470/F1P2_20) mRNA, complete cds Length = 715 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 150 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 209 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 144 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 203 Query: 210 aaccc 214 ||||| Sbjct: 204 aaccc 208 Score = 48.1 bits (24), Expect = 0.028 Identities = 105/132 (79%) Strand = Plus / Plus Query: 326 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 385 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 320 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 379 Query: 386 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 445 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 380 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 439 Query: 446 atggcacaacac 457 |||||||||||| Sbjct: 440 atggcacaacac 451
>emb|BX826089.1|CNS0A6C9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL84ZA10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 973 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 150 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 209 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 517 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 576 Query: 210 aaccc 214 ||||| Sbjct: 577 aaccc 581 Score = 48.1 bits (24), Expect = 0.028 Identities = 105/132 (79%) Strand = Plus / Plus Query: 326 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 385 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 693 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 752 Query: 386 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 445 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 753 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 812 Query: 446 atggcacaacac 457 |||||||||||| Sbjct: 813 atggcacaacac 824
>emb|BX825536.1|CNS0A6EC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL42ZH07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1035 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 150 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 209 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 514 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 573 Query: 210 aaccc 214 ||||| Sbjct: 574 aaccc 578
>emb|BX823268.1|CNS0A6MH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS18ZF07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1046 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 150 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 209 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 501 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 560 Query: 210 aaccc 214 ||||| Sbjct: 561 aaccc 565 Score = 48.1 bits (24), Expect = 0.028 Identities = 105/132 (79%) Strand = Plus / Plus Query: 326 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 385 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 677 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 736 Query: 386 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 445 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 737 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 796 Query: 446 atggcacaacac 457 |||||||||||| Sbjct: 797 atggcacaacac 808
>gb|AY086470.1| Arabidopsis thaliana clone 2531 mRNA, complete sequence Length = 1267 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 150 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 209 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 688 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 747 Query: 210 aaccc 214 ||||| Sbjct: 748 aaccc 752 Score = 48.1 bits (24), Expect = 0.028 Identities = 105/132 (79%) Strand = Plus / Plus Query: 326 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 385 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 864 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 923 Query: 386 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 445 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 924 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 983 Query: 446 atggcacaacac 457 |||||||||||| Sbjct: 984 atggcacaacac 995
>gb|M63931.1|ATHCABM Arabidopsis thaliana light-harvesting chlorophyll a/b-binding protein (Cab4) mRNA, complete cds Length = 1050 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 150 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 209 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 497 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 556 Query: 210 aaccc 214 ||||| Sbjct: 557 aaccc 561 Score = 48.1 bits (24), Expect = 0.028 Identities = 105/132 (79%) Strand = Plus / Plus Query: 326 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 385 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 673 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 732 Query: 386 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 445 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 733 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 792 Query: 446 atggcacaacac 457 |||||||||||| Sbjct: 793 atggcacaacac 804
>gb|BT015429.1| Arabidopsis thaliana At3g47470 mRNA sequence Length = 405 Score = 48.1 bits (24), Expect = 0.028 Identities = 105/132 (79%) Strand = Plus / Plus Query: 326 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 385 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 252 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 311 Query: 386 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 445 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 312 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 371 Query: 446 atggcacaacac 457 |||||||||||| Sbjct: 372 atggcacaacac 383 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 156 atcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaagaaccc 214 ||||||||||| | || || ||||| |||||| | |||||||| |||||||||||||| Sbjct: 82 atcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaagaaccc 140
>emb|BX824775.1|CNS0A6UB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH71ZB01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 508 Score = 48.1 bits (24), Expect = 0.028 Identities = 105/132 (79%) Strand = Plus / Plus Query: 326 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 385 ||||||||| ||||| || |||||||| |||| ||| |||| ||| | ||||| |||| Sbjct: 166 caaggagaaagagctagcaaacgggaggttggcgatgttggcattcttagggtttgtggt 225 Query: 386 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctggccgaccc 445 || ||||| ||||| || || || || || ||||| ||| ||||||| || | ||||| Sbjct: 226 tcaacacaatgtgactggaaaaggaccatttgagaatctgttgcagcacttgtctgaccc 285 Query: 446 atggcacaacac 457 |||||||||||| Sbjct: 286 atggcacaacac 297 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Plus Query: 177 tacgtcgagatccggcggtggcaggacatcaagaaccc 214 ||||| |||||| | |||||||| |||||||||||||| Sbjct: 17 tacgttgagatcagacggtggcaagacatcaagaaccc 54
>gb|AY109341.1| Zea mays CL4601_3 mRNA sequence Length = 1460 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 447 tggcacaacaccatcatccagacc 470 |||||||||||||||||||||||| Sbjct: 303 tggcacaacaccatcatccagacc 280
>gb|AF110786.1|AF110786 Volvox carteri f. nagariensis clone G18 light harvesting complex a protein (lhca) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1047 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 86 gctgaacgcgcccgagtggtacgacgccggcaagg 120 |||||||| ||| |||||||||||||| ||||||| Sbjct: 346 gctgaacgtgccggagtggtacgacgctggcaagg 380
>gb|AY105356.1| Zea mays PCO075138 mRNA sequence Length = 1317 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Plus Query: 7 cggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggagg 66 ||||||||||| || | |||||||||||||| || | |||||| || | ||||||||| Sbjct: 475 cggagctggtgcactgccggtgggcgatgctcggcgcggcgggcatcttcatcccggagt 534 Query: 67 tgctgaccaag 77 | ||||||||| Sbjct: 535 ttctgaccaag 545
>ref|XM_747159.1| Aspergillus fumigatus Af293 septin (Afu1g08850) partial mRNA Length = 1041 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 143 cacgctcttcgtcatcgagttc 164 |||||||||||||||||||||| Sbjct: 682 cacgctcttcgtcatcgagttc 661
>gb|AF010321.1|AF010321 Oryza sativa photosystem I antenna protein (Lhca) mRNA, complete cds Length = 1066 Score = 44.1 bits (22), Expect = 0.44 Identities = 46/54 (85%) Strand = Plus / Plus Query: 24 cggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctgaccaag 77 ||||||||||||||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 316 cggtgggcgatgctgggcgcggcgggcatcttcatcccggagttcctgaccaag 369
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 aggtgctgaccaaggcggggctgct 88 ||||||||||| ||||||||||||| Sbjct: 600685 aggtgctgaccgaggcggggctgct 600709
>emb|BX571658.1| Wolinella succinogenes, complete genome; segment 2/7 Length = 346792 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 120 gagacctacttcgcctcctcctcca 144 ||||||| ||||||||||||||||| Sbjct: 323434 gagaccttcttcgcctcctcctcca 323410
>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17, complete sequence Length = 141041 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 acttcgcctcctcctccacgc 147 ||||||||||||||||||||| Sbjct: 116484 acttcgcctcctcctccacgc 116464
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 acttcgcctcctcctccacgc 147 ||||||||||||||||||||| Sbjct: 15262785 acttcgcctcctcctccacgc 15262765
>ref|XM_392275.2| PREDICTED: Apis mellifera similar to ENSANGP00000012777 (LOC408740), mRNA Length = 1629 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 caccctcgagaacaaggagaa 334 ||||||||||||||||||||| Sbjct: 1002 caccctcgagaacaaggagaa 1022
>gb|DQ020212.1| Bambusa oldhamii cellulose synthase BoCesA4b mRNA, partial cds Length = 3409 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 atgctgggggtggcggggatg 53 ||||||||||||||||||||| Sbjct: 308 atgctgggggtggcggggatg 328
>gb|DQ020211.1| Bambusa oldhamii cellulose synthase BoCesA4a mRNA, complete cds Length = 3756 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 atgctgggggtggcggggatg 53 ||||||||||||||||||||| Sbjct: 646 atgctgggggtggcggggatg 666
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 453 aacaccatcatccagaccatc 473 ||||||||||||||||||||| Sbjct: 631582 aacaccatcatccagaccatc 631602
>gb|AY107739.1| Zea mays PCO089350 mRNA sequence Length = 645 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 251 cagcctcccgccccacgagtgcggc 275 |||||||| |||||||||||||||| Sbjct: 286 cagcctccagccccacgagtgcggc 310
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 acttcgcctcctcctccacgc 147 ||||||||||||||||||||| Sbjct: 15271026 acttcgcctcctcctccacgc 15271006
>ref|NM_188089.1| Oryza sativa (japonica cultivar-group), Ozsa8521 predicted mRNA Length = 1089 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 450 cacaacaccatcatccagaccatctccg 477 |||||| ||||| ||||||||||||||| Sbjct: 982 cacaacgccatcctccagaccatctccg 1009
>ref|XM_514527.1| PREDICTED: Pan troglodytes ribosome binding protein 1 (LOC458109), mRNA Length = 7485 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccacgctcttc 152 |||||||||||||||||||| Sbjct: 5809 cctcctcctccacgctcttc 5790
>ref|XM_513425.1| PREDICTED: Pan troglodytes similar to FLJ46354 protein (LOC456875), mRNA Length = 4908 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gaggtcggagctggtgaacg 21 |||||||||||||||||||| Sbjct: 3663 gaggtcggagctggtgaacg 3682
>ref|NM_002206.1| Homo sapiens integrin, alpha 7 (ITGA7), mRNA Length = 4079 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atgctgatcccggaggtgct 70 |||||||||||||||||||| Sbjct: 2479 atgctgatcccggaggtgct 2460
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 caaggagaaggagctcgcca 345 |||||||||||||||||||| Sbjct: 363839 caaggagaaggagctcgcca 363820
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ggcggggctgctgaacgcgc 96 |||||||||||||||||||| Sbjct: 3493351 ggcggggctgctgaacgcgc 3493370
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tcgcctcctcctccacgctc 149 |||||||||||||||||||| Sbjct: 669660 tcgcctcctcctccacgctc 669641
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gcggtgggcgatgctggggg 42 |||||||||||||||||||| Sbjct: 79464 gcggtgggcgatgctggggg 79445
>ref|NM_001039464.1| Homo sapiens chromosome 1 open reading frame 175 (C1orf175), mRNA Length = 4367 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gaggtcggagctggtgaacg 21 |||||||||||||||||||| Sbjct: 1807 gaggtcggagctggtgaacg 1826
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ggcggggctgctgaacgcgc 96 |||||||||||||||||||| Sbjct: 529593 ggcggggctgctgaacgcgc 529612
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 11 gctggtgaacgggcggtgggcgatgctggggg 42 |||||||| |||||||||||| ||||||||| Sbjct: 1885374 gctggtgagggggcggtgggcggtgctggggg 1885343
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gcggtgggcgatgctggggg 42 |||||||||||||||||||| Sbjct: 21808352 gcggtgggcgatgctggggg 21808371
>emb|AL133520.5| Human DNA sequence from clone RP1-101A2 on chromosome 20, complete sequence Length = 47325 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 369 ttcctggggttcctggtgcagcac 392 ||||||||||||||||||| |||| Sbjct: 32848 ttcctggggttcctggtgctgcac 32871
>ref|XM_567806.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNK01210) partial mRNA Length = 1432 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 caaggagaaggagctcgcca 345 |||||||||||||||||||| Sbjct: 1077 caaggagaaggagctcgcca 1096
>gb|BC020482.1| Homo sapiens ribosome binding protein 1 homolog 180kDa (dog), mRNA (cDNA clone IMAGE:3919185) Length = 1638 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccacgctcttc 152 |||||||||||||||||||| Sbjct: 1460 cctcctcctccacgctcttc 1441
>gb|BC000099.2| Homo sapiens ribosome binding protein 1 homolog 180kDa (dog), mRNA (cDNA clone IMAGE:3509994), partial cds Length = 2069 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccacgctcttc 152 |||||||||||||||||||| Sbjct: 1193 cctcctcctccacgctcttc 1174
>ref|XM_535195.2| PREDICTED: Canis familiaris similar to inter-alpha globulin inhibitor H2 polypeptide (LOC478011), mRNA Length = 2941 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 caacaccatcatccagacca 471 |||||||||||||||||||| Sbjct: 358 caacaccatcatccagacca 377
>gb|AY358882.1| Homo sapiens clone DNA55737 ITGA7 (UNQ406) mRNA, complete cds Length = 3951 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atgctgatcccggaggtgct 70 |||||||||||||||||||| Sbjct: 2349 atgctgatcccggaggtgct 2330
>gb|BC028620.1| Homo sapiens cDNA clone IMAGE:4822611, **** WARNING: chimeric clone **** Length = 5183 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gaggtcggagctggtgaacg 21 |||||||||||||||||||| Sbjct: 1795 gaggtcggagctggtgaacg 1814
>gb|BC080526.1| Homo sapiens ribosome binding protein 1 homolog 180kDa (dog), mRNA (cDNA clone IMAGE:4561660) Length = 1951 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccacgctcttc 152 |||||||||||||||||||| Sbjct: 1319 cctcctcctccacgctcttc 1300
>gb|BC095478.1| Homo sapiens chromosome 1 open reading frame 175, mRNA (cDNA clone IMAGE:30378841) Length = 4343 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gaggtcggagctggtgaacg 21 |||||||||||||||||||| Sbjct: 1620 gaggtcggagctggtgaacg 1639
>emb|AL139244.21| Human DNA sequence from clone RP5-1043G4 on chromosome 1p32.1-33 Contains the 3' end of a novel gene (FLJ46354), the TTC4 gene for tetratricopeptide repeat domain 4, a novel gene (DKFZp727A071), the 3' end of a novel gene (FLJ20619) and three CpG islands, complete sequence Length = 129156 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gaggtcggagctggtgaacg 21 |||||||||||||||||||| Sbjct: 14699 gaggtcggagctggtgaacg 14718
>emb|AL139016.8| Human DNA sequence from clone RP4-658C17 on chromosome 1p11.1-13.3, complete sequence Length = 100643 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccacgctcttc 152 |||||||||||||||||||| Sbjct: 28397 cctcctcctccacgctcttc 28378
>emb|AL132765.38|HSA462D18 Human DNA sequence from clone RP11-462D18 on chromosome 20 Contains the 5' end of the BFSP1 gene for beaded filament structural protein 1 (filensin), the DSTN gene for destrin (actin depolymerizing factor ADF), a ras-like pseudogene, the RRBP1 gene for ribosome binding protein 1 (dog 180 kDa homolog), the 5' end of the C20orf179 gene for chromosome 20 open reading frame 179 and two CpG islands, complete sequence Length = 166001 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 cctcctcctccacgctcttc 152 |||||||||||||||||||| Sbjct: 67121 cctcctcctccacgctcttc 67140
>emb|CR749830.1| Homo sapiens mRNA; cDNA DKFZp781B0622 (from clone DKFZp781B0622) Length = 6212 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gaggtcggagctggtgaacg 21 |||||||||||||||||||| Sbjct: 1970 gaggtcggagctggtgaacg 1989
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ggcggggctgctgaacgcgc 96 |||||||||||||||||||| Sbjct: 338249 ggcggggctgctgaacgcgc 338268
>gb|BC050280.1| Homo sapiens integrin, alpha 7, mRNA (cDNA clone MGC:33821 IMAGE:5284443), complete cds Length = 4130 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atgctgatcccggaggtgct 70 |||||||||||||||||||| Sbjct: 2534 atgctgatcccggaggtgct 2515
>emb|AL833822.1|HSM805097 Homo sapiens mRNA; cDNA DKFZp586A1420 (from clone DKFZp586A1420) Length = 2400 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccacgctcttc 152 |||||||||||||||||||| Sbjct: 2223 cctcctcctccacgctcttc 2204
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 acaacaccatcatccagacc 470 |||||||||||||||||||| Sbjct: 172980 acaacaccatcatccagacc 172999
>gb|AF448525.1| Mytilus galloprovincialis precollagen-P mRNA, complete cds Length = 2781 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 ctggcgttcctggggttcctggtg 386 |||| ||||||||||||||||||| Sbjct: 1089 ctggtgttcctggggttcctggtg 1066
>gb|AC009779.18| Homo sapiens 12 BAC RP11-644F5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 192550 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atgctgatcccggaggtgct 70 |||||||||||||||||||| Sbjct: 42716 atgctgatcccggaggtgct 42697
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tgggggtggcggggatgctg 56 |||||||||||||||||||| Sbjct: 145178 tgggggtggcggggatgctg 145159
>ref|NM_004587.1| Homo sapiens ribosome binding protein 1 homolog 180kDa (dog) (RRBP1), mRNA Length = 3106 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccacgctcttc 152 |||||||||||||||||||| Sbjct: 2228 cctcctcctccacgctcttc 2209
>dbj|AK093465.1| Homo sapiens cDNA FLJ36146 fis, clone TESTI2025117, highly similar to Homo sapiens ES/130 mRNA Length = 1648 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccacgctcttc 152 |||||||||||||||||||| Sbjct: 793 cctcctcctccacgctcttc 774
>dbj|AK022548.1| Homo sapiens cDNA FLJ12486 fis, clone NT2RM2000566, highly similar to Homo sapiens integrin alpha-7 mRNA Length = 3504 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atgctgatcccggaggtgct 70 |||||||||||||||||||| Sbjct: 1922 atgctgatcccggaggtgct 1903
>dbj|AB189167.1| Oryza sativa (japonica cultivar-group) OsIDHa mRNA for NAD-dependent isocitrate dehydrogenase a, complete cds Length = 1424 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 450 cacaacaccatcatccagaccatctccg 477 |||||| ||||| ||||||||||||||| Sbjct: 1108 cacaacgccatcctccagaccatctccg 1135
>gb|S68728.1| LHC Ib-21=light-harvesting complex I [Hordeum vulgare=barley, Prato, mRNA Chloroplast, 878 nt] Length = 878 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 345 aacgggagactggccatgctggcgttcctggggttc 380 |||||| | ||||| |||||||||||| |||||||| Sbjct: 508 aacgggcggctggcgatgctggcgttcgtggggttc 543
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 ctgcagcagcacctggccga 442 |||||||||||||||||||| Sbjct: 665722 ctgcagcagcacctggccga 665703
>gb|AC011736.4|AC011736 Homo sapiens BAC clone CTD-2331A14 from 1, complete sequence Length = 122146 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 gaggtcggagctggtgaacg 21 |||||||||||||||||||| Sbjct: 18508 gaggtcggagctggtgaacg 18489
>ref|XM_393975.2| PREDICTED: Apis mellifera hypothetical LOC410496 (LOC410496), mRNA Length = 4959 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 cttcgcctcctcctccacgctctt 151 |||| ||||||||||||||||||| Sbjct: 1341 cttctcctcctcctccacgctctt 1318
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gcggtgggcgatgctggggg 42 |||||||||||||||||||| Sbjct: 21801381 gcggtgggcgatgctggggg 21801400
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 450 cacaacaccatcatccagaccatctccg 477 |||||| ||||| ||||||||||||||| Sbjct: 9668687 cacaacgccatcctccagaccatctccg 9668714
>dbj|AB210036.1| Homo sapiens mRNA for ITGA7 variant protein, partial cds, clone: hk04261 Length = 4090 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atgctgatcccggaggtgct 70 |||||||||||||||||||| Sbjct: 2508 atgctgatcccggaggtgct 2489
>gb|AF072132.1|AF072132 Homo sapiens integrin alpha-7 mRNA, complete cds Length = 3485 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atgctgatcccggaggtgct 70 |||||||||||||||||||| Sbjct: 2318 atgctgatcccggaggtgct 2299
>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0038F12 Length = 190014 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 450 cacaacaccatcatccagaccatctccg 477 |||||| ||||| ||||||||||||||| Sbjct: 106690 cacaacgccatcctccagaccatctccg 106717
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 455 caccatcatccagaccatctccgg 478 |||| ||||||||||||||||||| Sbjct: 5018824 caccctcatccagaccatctccgg 5018847
>emb|BX648088.1|HSM808234 Homo sapiens mRNA; cDNA DKFZp686L2332 (from clone DKFZp686L2332) Length = 5873 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gaggtcggagctggtgaacg 21 |||||||||||||||||||| Sbjct: 1776 gaggtcggagctggtgaacg 1795
>dbj|AB122118.1| Chlamydomonas reinhardtii LhcI-5 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1886 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 216 ggctccgtcaaccaggaccccatcttca 243 |||||||| |||||||||||||||||| Sbjct: 1058 ggctccgtggaccaggaccccatcttca 1085
>dbj|AK057949.1| Homo sapiens cDNA FLJ25220 fis, clone STM00558, highly similar to Homo sapiens integrin alpha-7 mRNA Length = 1965 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atgctgatcccggaggtgct 70 |||||||||||||||||||| Sbjct: 383 atgctgatcccggaggtgct 364
>dbj|AK130047.1| Homo sapiens cDNA FLJ26537 fis, clone KDN09260 Length = 4548 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gaggtcggagctggtgaacg 21 |||||||||||||||||||| Sbjct: 2327 gaggtcggagctggtgaacg 2346
>emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b- binding protein ( LHCP ) Length = 1030 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 19 acgggcggtgggcgatgctggggg 42 ||||||| |||||||||||||||| Sbjct: 479 acgggcgctgggcgatgctggggg 502
>gb|AF218305.1|AF218305 Hordeum vulgare chlorophyll a/b binding protein precursor (lhca1) mRNA, complete cds; nuclear gene for chloroplast product Length = 784 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 345 aacgggagactggccatgctggcgttcctggggttc 380 |||||| | ||||| |||||||||||| |||||||| Sbjct: 626 aacgggcggctggcgatgctggcgttcgtggggttc 661
>dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full insert sequence Length = 1106 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gcggtgggcgatgctggggg 42 |||||||||||||||||||| Sbjct: 351 gcggtgggcgatgctggggg 370
>dbj|AK059596.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-D11, full insert sequence Length = 1522 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 450 cacaacaccatcatccagaccatctccg 477 |||||| ||||| ||||||||||||||| Sbjct: 1122 cacaacgccatcctccagaccatctccg 1149
>emb|AJ228853.1|HSAJ8853 Homo sapiens ITGA7 gene, exon 18 Length = 247 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atgctgatcccggaggtgct 70 |||||||||||||||||||| Sbjct: 100 atgctgatcccggaggtgct 81
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 cgctcttcgtcatcgagttcatcc 168 ||||||||||||||||| |||||| Sbjct: 4362320 cgctcttcgtcatcgaggtcatcc 4362343
>gb|AF082100.1|AF082100 Streptomyces sp. MA6548 FK506 peptide synthetase (fkbP), FK506 oxidase (fkbO), and FK506 polyketide synthase (fkbB) genes, complete cds Length = 28732 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 acctgcagcagcacctggccgacc 444 |||||||||||||||||| ||||| Sbjct: 3431 acctgcagcagcacctggacgacc 3454
>gb|AF032108.1|AF032108 Homo sapiens integrin alpha-7 mRNA, complete cds Length = 4079 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atgctgatcccggaggtgct 70 |||||||||||||||||||| Sbjct: 2479 atgctgatcccggaggtgct 2460
>emb|AL832492.1|HSM803800 Homo sapiens mRNA; cDNA DKFZp686M2122 (from clone DKFZp686M2122) Length = 3836 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gaggtcggagctggtgaacg 21 |||||||||||||||||||| Sbjct: 1065 gaggtcggagctggtgaacg 1084
>gb|AF006751.1|AF006751 Homo sapiens ES/130 mRNA, complete cds Length = 3106 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccacgctcttc 152 |||||||||||||||||||| Sbjct: 2228 cctcctcctccacgctcttc 2209
>gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gcggtgggcgatgctggggg 42 |||||||||||||||||||| Sbjct: 340 gcggtgggcgatgctggggg 359
>emb|AL096749.1|HSM800644 Homo sapiens mRNA; cDNA DKFZp434G153 (from clone DKFZp434G153) Length = 2688 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gaggtcggagctggtgaacg 21 |||||||||||||||||||| Sbjct: 260 gaggtcggagctggtgaacg 279
>gb|M19529.1|PIGFSA Pig follistatin (FS) gene, complete cds Length = 6247 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 tcgcctcctcctccacgctc 149 |||||||||||||||||||| Sbjct: 2631 tcgcctcctcctccacgctc 2650
>dbj|AB037819.2| Homo sapiens mRNA for KIAA1398 protein, partial cds Length = 5468 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cctcctcctccacgctcttc 152 |||||||||||||||||||| Sbjct: 4191 cctcctcctccacgctcttc 4172
>dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 989 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gcggtgggcgatgctggggg 42 |||||||||||||||||||| Sbjct: 332 gcggtgggcgatgctggggg 351 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,118,439 Number of Sequences: 3902068 Number of extensions: 4118439 Number of successful extensions: 83195 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81931 Number of HSP's gapped (non-prelim): 1240 length of query: 505 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 483 effective length of database: 17,147,199,772 effective search space: 8282097489876 effective search space used: 8282097489876 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)