ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd25k03 |
|---|---|
| Clone Library Name | barley_pub |
>ORYA_ORYSA (P25776) Oryzain alpha chain precursor (EC 3.4.22.-)| Length = 458 Score = 125 bits (315), Expect = 5e-29 Identities = 56/74 (75%), Positives = 63/74 (85%) Frame = -3 Query: 489 KECFAWGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCLAAKDSPLSVKAQRRTLAKPIG 310 K C+AWGCCPLEGATCCDDHYSCCPH YPICN +QGTCL AKDSPL+VKA +RTLAKP Sbjct: 387 KYCYAWGCCPLEGATCCDDHYSCCPHEYPICNVQQGTCLMAKDSPLAVKALKRTLAKPNL 446 Query: 309 AFSGIAIDGKKSSA 268 +F + +GKKSSA Sbjct: 447 SF--LFGNGKKSSA 458
>CYSPL_LYCES (P20721) Low-temperature-induced cysteine proteinase precursor (EC| 3.4.22.-) (Fragment) Length = 346 Score = 120 bits (302), Expect = 2e-27 Identities = 50/74 (67%), Positives = 60/74 (81%) Frame = -3 Query: 489 KECFAWGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCLAAKDSPLSVKAQRRTLAKPIG 310 + CF+WGCCPLEGATCC+DHYSCCPH+YPICN +QGTC +K +PL VKA +R LA+PIG Sbjct: 276 RSCFSWGCCPLEGATCCEDHYSCCPHDYPICNVRQGTCSMSKGNPLGVKAMKRILAQPIG 335 Query: 309 AFSGIAIDGKKSSA 268 AF GKKSS+ Sbjct: 336 AFGN---GGKKSSS 346
>RD21A_ARATH (P43297) Cysteine proteinase RD21a precursor (EC 3.4.22.-) (RD21)| Length = 462 Score = 103 bits (256), Expect = 3e-22 Identities = 41/58 (70%), Positives = 47/58 (81%) Frame = -3 Query: 489 KECFAWGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCLAAKDSPLSVKAQRRTLAKP 316 K CFAWGCCPLE ATCCDD+YSCCPH YP+C+ QGTCL +K+SP SVKA +R A P Sbjct: 395 KYCFAWGCCPLEAATCCDDNYSCCPHEYPVCDLDQGTCLLSKNSPFSVKALKRKPATP 452
>ORYB_ORYSA (P25777) Oryzain beta chain precursor (EC 3.4.22.-)| Length = 471 Score = 101 bits (251), Expect = 1e-21 Identities = 40/55 (72%), Positives = 47/55 (85%) Frame = -3 Query: 483 CFAWGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCLAAKDSPLSVKAQRRTLAK 319 C WGCCP+EGATCC DH SCCP +YP+CNT+ GTC A+K+SPLSVKA +RTLAK Sbjct: 407 CLVWGCCPVEGATCCKDHASCCPPDYPVCNTRAGTCSASKNSPLSVKALKRTLAK 461
>CYSP1_ORYSA (Q7XR52) Cysteine protease 1 precursor (EC 3.4.22.-) (OsCP1)| Length = 490 Score = 79.3 bits (194), Expect = 5e-15 Identities = 27/47 (57%), Positives = 35/47 (74%) Frame = -3 Query: 483 CFAWGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCLAAKDSPLSVK 343 C WGCCP+EGATCC DH +CCP YP+CN K TC +K+SP +++ Sbjct: 417 CIVWGCCPVEGATCCKDHSTCCPKEYPVCNAKARTCSKSKNSPYNIR 463
>GRN_MOUSE (P28798) Granulins precursor (Proepithelin) (PEPI) (PC cell-derived| growth factor) (PCDGF) [Contains: Acrogranin; Granulin-1; Granulin-2; Granulin-3; Granulin-4; Granulin-5; Granulin-6; Granulin-7] Length = 589 Score = 54.3 bits (129), Expect = 2e-07 Identities = 19/34 (55%), Positives = 24/34 (70%) Frame = -3 Query: 477 AWGCCPLEGATCCDDHYSCCPHNYPICNTKQGTC 376 AWGCCP A CC+DH CCP + C+T++GTC Sbjct: 301 AWGCCPFAKAVCCEDHIHCCPAGFQ-CHTEKGTC 333 Score = 45.8 bits (107), Expect = 6e-05 Identities = 16/35 (45%), Positives = 22/35 (62%) Frame = -3 Query: 474 WGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCLA 370 +GCCP+ A CC DH CCP + +C+ Q CL+ Sbjct: 228 YGCCPMPNAICCSDHLHCCPQD-TVCDLIQSKCLS 261 Score = 45.4 bits (106), Expect = 8e-05 Identities = 17/34 (50%), Positives = 19/34 (55%) Frame = -3 Query: 477 AWGCCPLEGATCCDDHYSCCPHNYPICNTKQGTC 376 +W CC L A CC+D CCP Y CN K TC Sbjct: 461 SWACCQLPHAVCCEDRQHCCPAGY-TCNVKARTC 493 Score = 45.4 bits (106), Expect = 8e-05 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 6/72 (8%) Frame = -3 Query: 477 AWGCCPLEGATCCDDHYSCCPHN------YPICNTKQGTCLAAKDSPLSVKAQRRTLAKP 316 +WGCCP+ A+CC+D CCPH + C + GT K P + R ++ P Sbjct: 145 SWGCCPMPQASCCEDRVHCCPHGASCDLVHTRCVSPTGTHTLLKKFP--AQKTNRAVSLP 202 Query: 315 IGAFSGIAIDGK 280 FS + D K Sbjct: 203 ---FSVVCPDAK 211 Score = 42.7 bits (99), Expect = 5e-04 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = -3 Query: 474 WGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCLA 370 WGCCP+ A CC D+ CCP + TCLA Sbjct: 384 WGCCPIPEAVCCSDNQHCCPQGF--------TCLA 410 Score = 39.3 bits (90), Expect = 0.006 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Frame = -3 Query: 468 CCPLEGATCCDDHYSCCPHNYPICNTKQGTCLAAKDSPL-SVKAQRRTLAKPIGAFSGIA 292 CCP C D Y CCP + C+ +C D+PL +V+ P A I Sbjct: 83 CCPFSKGVSCGDGYHCCPQGFH-CSADGKSCFQMSDNPLGAVQCPGSQFECPDSATCCIM 141 Query: 291 IDG 283 +DG Sbjct: 142 VDG 144 Score = 36.2 bits (82), Expect = 0.049 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = -3 Query: 474 WGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCLAAK 364 W CCP CC D CCP + C+ + CL K Sbjct: 537 WACCPYLKGVCCRDGRHCCPGGFH-CSARGTKCLRKK 572
>GRN_HUMAN (P28799) Granulins precursor (Proepithelin) (PEPI) [Contains:| Acrogranin; Paragranulin; Granulin-1 (Granulin G); Granulin-2 (Granulin F); Granulin-3 (Granulin B); Granulin-4 (Granulin A); Granulin-5 (Granulin C); Granulin-6 (Granulin D); Granul Length = 593 Score = 54.3 bits (129), Expect = 2e-07 Identities = 19/34 (55%), Positives = 24/34 (70%) Frame = -3 Query: 477 AWGCCPLEGATCCDDHYSCCPHNYPICNTKQGTC 376 AWGCCP A CC+DH CCP + C+T++GTC Sbjct: 303 AWGCCPFTQAVCCEDHIHCCPAGF-TCDTQKGTC 335 Score = 48.9 bits (115), Expect = 7e-06 Identities = 17/39 (43%), Positives = 26/39 (66%) Frame = -3 Query: 474 WGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCLAAKDS 358 +GCCP+ ATCC DH CCP + +C+ Q CL+ +++ Sbjct: 229 YGCCPMPNATCCSDHLHCCPQD-TVCDLIQSKCLSKENA 266 Score = 47.4 bits (111), Expect = 2e-05 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 6/47 (12%) Frame = -3 Query: 477 AWGCCPLEGATCCDDHYSCCPHN------YPICNTKQGTCLAAKDSP 355 +WGCCP+ A+CC+D CCPH + C T GT AK P Sbjct: 146 SWGCCPMPQASCCEDRVHCCPHGAFCDLVHTRCITPTGTHPLAKKLP 192 Score = 47.0 bits (110), Expect = 3e-05 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = -3 Query: 474 WGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCLAAKDSPLSVK---AQRRTLAKP 316 WGCCP+ A CC DH CCP Y +G C + ++ A+R +L+ P Sbjct: 386 WGCCPIPEAVCCSDHQHCCPQGYTC--VAEGQCQRGSEIVAGLEKMPARRASLSHP 439 Score = 43.9 bits (102), Expect = 2e-04 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = -3 Query: 477 AWGCCPLEGATCCDDHYSCCPHNYPICNTKQGTC 376 +W CC L A CC+D CCP Y CN K +C Sbjct: 463 SWACCQLPHAVCCEDRQHCCPAGY-TCNVKARSC 495 Score = 38.9 bits (89), Expect = 0.008 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Frame = -3 Query: 474 WGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCLAAK----DSPLSVKAQRRTL 325 W CCP CC D CCP + C + CL + D+PL A R+ L Sbjct: 541 WACCPYRQGVCCADRRHCCPAGFR-CAARGTKCLRREAPRWDAPLRDPALRQLL 593 Score = 30.8 bits (68), Expect = 2.1 Identities = 11/31 (35%), Positives = 15/31 (48%) Frame = -3 Query: 468 CCPLEGATCCDDHYSCCPHNYPICNTKQGTC 376 CCP A C D + CCP + C+ +C Sbjct: 83 CCPFPEAVACGDGHHCCPRGFH-CSADGRSC 112
>GRN_RAT (P23785) Granulins precursor [Contains: Acrogranin; Granulin-1| (Granulin G); Granulin-2 (Granulin F); Granulin-3 (Granulin B) (Epithelin-2); Granulin-4 (Granulin A) (Epithelin-1); Granulin-5 (Granulin C); Granulin-6 (Granulin D); Granulin-7 (Gran Length = 588 Score = 53.5 bits (127), Expect = 3e-07 Identities = 19/34 (55%), Positives = 23/34 (67%) Frame = -3 Query: 477 AWGCCPLEGATCCDDHYSCCPHNYPICNTKQGTC 376 AWGCCP A CC+DH CCP + C+T+ GTC Sbjct: 300 AWGCCPFTKAVCCEDHIHCCPAGFQ-CHTETGTC 332 Score = 50.4 bits (119), Expect = 3e-06 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = -3 Query: 477 AWGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCLAAKDS-PLSVKAQRRTLAKPIGAFS 301 +WGCCP+ A+CC+D CCPH C+ C++ + PL K + + + +FS Sbjct: 145 SWGCCPMPQASCCEDRVHCCPHG-ASCDLVHTRCISPTGTHPLLKKFPAQRTNRAVASFS 203 Query: 300 GIAIDGK 280 + D K Sbjct: 204 VVCPDAK 210 Score = 45.4 bits (106), Expect = 8e-05 Identities = 17/34 (50%), Positives = 19/34 (55%) Frame = -3 Query: 477 AWGCCPLEGATCCDDHYSCCPHNYPICNTKQGTC 376 +W CC L A CC+D CCP Y CN K TC Sbjct: 460 SWACCQLPHAVCCEDRQHCCPAGY-TCNVKARTC 492 Score = 45.1 bits (105), Expect = 1e-04 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = -3 Query: 474 WGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCLA 370 +GCCP+ A CC DH CCP + +C+ Q C++ Sbjct: 227 YGCCPMPNAICCSDHLHCCPQD-TVCDLIQSKCIS 260 Score = 42.7 bits (99), Expect = 5e-04 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = -3 Query: 474 WGCCPLEGATCCDDHYSCCPHNY 406 WGCCP+ A CC DH CCP + Sbjct: 383 WGCCPMPEAVCCLDHQHCCPQGF 405 Score = 37.4 bits (85), Expect = 0.022 Identities = 15/37 (40%), Positives = 17/37 (45%) Frame = -3 Query: 474 WGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCLAAK 364 W CCP CC D CCP + C+ K CL K Sbjct: 536 WACCPYVKGVCCRDGRHCCPIGFH-CSAKGTKCLRKK 571 Score = 35.8 bits (81), Expect = 0.064 Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Frame = -3 Query: 468 CCPLEGATCCDDHYSCCPHNYPICNTKQGTCLAAKDSPL-SVKAQRRTLAKPIGAFSGIA 292 CCP CDD CCP + C+ +C DS L +V+ P A I Sbjct: 83 CCPFSEGVSCDDGQHCCPRGFH-CSADGKSCSQISDSLLGAVQCPGSQFECPDSATCCIM 141 Query: 291 IDG 283 IDG Sbjct: 142 IDG 144
>GRN_CAVPO (P28797) Granulins precursor (Proepithelin) (PEPI) [Contains:| Acrogranin; Granulin-1; Granulin-2; Granulin-3; Granulin-4; Granulin-5; Granulin-6; Granulin-7] (Fragment) Length = 591 Score = 52.0 bits (123), Expect = 9e-07 Identities = 22/53 (41%), Positives = 31/53 (58%) Frame = -3 Query: 474 WGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCLAAKDSPLSVKAQRRTLAKP 316 WGCCP A CC+DH CCP + C+T++ TC + L V ++T A+P Sbjct: 303 WGCCPFPKAVCCEDHVHCCPERFR-CHTEKDTC---EQGLLQVPWAQKTPAQP 351 Score = 47.8 bits (112), Expect = 2e-05 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = -3 Query: 474 WGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCLA 370 +GCCP+ A CC DH CCP + +C+ +Q CL+ Sbjct: 229 YGCCPMPNAICCSDHLHCCPQD-TVCDLRQSRCLS 262 Score = 47.8 bits (112), Expect = 2e-05 Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 3/51 (5%) Frame = -3 Query: 477 AWGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCLAAKDS-PLSVK--AQR 334 +WGCCP+ A+CC+D CCPH C+ C+ A S PL+ K AQR Sbjct: 132 SWGCCPMPQASCCEDRVHCCPHG-ASCDLVHIRCVTALGSHPLTTKLPAQR 181 Score = 45.1 bits (105), Expect = 1e-04 Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 5/48 (10%) Frame = -3 Query: 474 WGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCLAAKD-----SPLSV 346 W CC L A CC+D CCP Y CN K +C A D +PL+V Sbjct: 461 WACCQLPHAVCCEDGQHCCPAGY-TCNVKARSCEKAADGAHLAAPLAV 507 Score = 40.0 bits (92), Expect = 0.003 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = -3 Query: 468 CCPLEGATCCDDHYSCCPHNYPICNTKQGTCLAAKD 361 CCP A C D + CCP+ + C+T GTC+ D Sbjct: 69 CCPFSQAMACGDGHHCCPYGFH-CSTDGGTCIQRPD 103 Score = 37.0 bits (84), Expect = 0.029 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = -3 Query: 474 WGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCLAAK 364 W CCP CC D CCP + C ++ C+ K Sbjct: 538 WACCPFHQGVCCKDQRHCCPAGFH-CESQGTRCVHKK 573
>GRN1_CYPCA (P81013) Granulin-1| Length = 57 Score = 36.6 bits (83), Expect = 0.038 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = -3 Query: 474 WGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCL 373 W CCP CC D CC H Y C++ CL Sbjct: 24 WYCCPFSMGQCCRDGIHCCRHGYH-CDSTSTHCL 56
>GRN3_CYPCA (P81015) Granulin-3| Length = 57 Score = 35.4 bits (80), Expect = 0.084 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = -3 Query: 474 WGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCL 373 W CCP CC D CC H Y C++ CL Sbjct: 24 WYCCPFLMGQCCRDGRHCCRHGYH-CDSTSTLCL 56
>GRN2_CYPCA (P81014) Granulin-2| Length = 57 Score = 35.4 bits (80), Expect = 0.084 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = -3 Query: 474 WGCCPLEGATCCDDHYSCCPHNYPICNTKQGTCL 373 W CCP CC D CC H Y C++ CL Sbjct: 24 WYCCPFLMGQCCRDGRHCCRHGYR-CDSTSTLCL 56
>PMD1_LOCMI (P80059) Pars intercerebralis major peptide D1 (PMP-D1)| Length = 54 Score = 33.5 bits (75), Expect = 0.32 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -3 Query: 471 GCCPLEGATCCDDHYSCCPHNYPICNTKQGTCL 373 GCCP + CC D CCP +C+ C+ Sbjct: 22 GCCPYKEGVCCLDGIHCCPSG-TVCDEDHRRCI 53
>PO2F2_PIG (Q29013) POU domain, class 2, transcription factor 2| (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2) Length = 478 Score = 33.1 bits (74), Expect = 0.42 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = -2 Query: 304 LWHCN*RQEEQRVNICITAFVQPTAMVINFCK*SPGDPRSKAQH 173 +W CN RQ+E+R+N C A + P SPG P S + H Sbjct: 343 VWFCNRRQKEKRINPCSAAPMLP----------SPGKPASYSPH 376
>PO2F2_MOUSE (Q00196) POU domain, class 2, transcription factor 2| (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2) Length = 462 Score = 33.1 bits (74), Expect = 0.42 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = -2 Query: 304 LWHCN*RQEEQRVNICITAFVQPTAMVINFCK*SPGDPRSKAQH 173 +W CN RQ+E+R+N C A + P SPG P S + H Sbjct: 326 VWFCNRRQKEKRINPCSAAPMLP----------SPGKPTSYSPH 359
>PO2F2_HUMAN (P09086) POU domain, class 2, transcription factor 2| (Octamer-binding transcription factor 2) (Oct-2) (OTF-2) (Lymphoid-restricted immunoglobulin octamer-binding protein NF-A2) Length = 478 Score = 33.1 bits (74), Expect = 0.42 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = -2 Query: 304 LWHCN*RQEEQRVNICITAFVQPTAMVINFCK*SPGDPRSKAQH 173 +W CN RQ+E+R+N C A + P SPG P S + H Sbjct: 342 VWFCNRRQKEKRINPCSAAPMLP----------SPGKPASYSPH 375
>MCSP_MOUSE (P15265) Sperm mitochondrial-associated cysteine-rich protein| Length = 143 Score = 31.2 bits (69), Expect = 1.6 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = -3 Query: 468 CCPLEGATCCDDHYSCCPHNYPICNTKQGTCLAAKD 361 CCP + +CC +CCP P C Q TC ++++ Sbjct: 74 CCP-QKCSCCPKKCTCCPQPPPCC--AQPTCCSSEN 106
>TENX_HUMAN (P22105) Tenascin-X precursor (TN-X) (Hexabrachion-like protein)| Length = 4289 Score = 31.2 bits (69), Expect = 1.6 Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 4/40 (10%) Frame = +3 Query: 324 PGYASEPSLTVGCPWPRG----TFPAWCCRWDSYEGSSCS 431 PGY E T CPW G C W Y G CS Sbjct: 330 PGYTGEDCGTRSCPWDCGEGGRCVDGRCVCWPGYTGEDCS 369
>AT1A1_OREMO (Q9YH26) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1023 Score = 30.8 bits (68), Expect = 2.1 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +2 Query: 35 CVGMS*VLHIHMQKQIWWFCKRPNPIL 115 C GM L ++ K +WWFC P +L Sbjct: 971 CPGMDVALRMYPMKPLWWFCAFPYSLL 997
>KR171_HUMAN (Q9BYP8) Keratin-associated protein 17-1 (Keratin associated| protein 16.1) Length = 105 Score = 30.4 bits (67), Expect = 2.7 Identities = 12/32 (37%), Positives = 15/32 (46%) Frame = -3 Query: 471 GCCPLEGATCCDDHYSCCPHNYPICNTKQGTC 376 GCCP + TCC +CC C + G C Sbjct: 2 GCCPGDCFTCCTQEQNCCEE----CCCQPGCC 29
>YDB4_SCHPO (Q10357) Hypothetical protein C22E12.04 in chromosome I| Length = 297 Score = 30.0 bits (66), Expect = 3.5 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 3/35 (8%) Frame = -3 Query: 471 GCCPLEGATCC-DDHYSCCPHNYPIC--NTKQGTC 376 GCC E +CC + SCC P C N K C Sbjct: 262 GCCSTEKTSCCSQEKKSCCTSEKPSCCSNGKSTVC 296
>ENA1_HORSE (P80930) Antimicrobial peptide eNAP-1 (Fragment)| Length = 46 Score = 30.0 bits (66), Expect = 3.5 Identities = 9/18 (50%), Positives = 9/18 (50%) Frame = -3 Query: 468 CCPLEGATCCDDHYSCCP 415 CCP CC D CCP Sbjct: 26 CCPYSQGVCCADQRHCCP 43
>SOMA_PANTR (P58756) Somatotropin precursor (Growth hormone) (GH) (GH-N)| (Pituitary growth hormone) (Growth hormone 1) Length = 217 Score = 29.3 bits (64), Expect = 6.0 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 10/68 (14%) Frame = +2 Query: 104 NPILGLCTGASII----------KKILESIAIAMLRLRSWITR*SFAEVNHHGRWLYECR 253 NP LC SI K LE + I++L ++SW+ F +Y Sbjct: 73 NPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGAS 132 Query: 254 DANVYALL 277 D+NVY LL Sbjct: 133 DSNVYDLL 140
>SOMA_HUMAN (P01241) Somatotropin precursor (Growth hormone) (GH) (GH-N)| (Pituitary growth hormone) (Growth hormone 1) Length = 217 Score = 29.3 bits (64), Expect = 6.0 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 10/68 (14%) Frame = +2 Query: 104 NPILGLCTGASII----------KKILESIAIAMLRLRSWITR*SFAEVNHHGRWLYECR 253 NP LC SI K LE + I++L ++SW+ F +Y Sbjct: 73 NPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGAS 132 Query: 254 DANVYALL 277 D+NVY LL Sbjct: 133 DSNVYDLL 140
>ZNF42_HUMAN (P28698) Zinc finger protein 42 (Myeloid zinc finger 1) (MZF-1)| (Zinc finger and SCAN domain-containing protein 6) Length = 734 Score = 28.9 bits (63), Expect = 7.8 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 7/51 (13%) Frame = +3 Query: 270 RCSSCRQLQCQRKHL*AW-------PGYASEPSLTVGCPWPRGTFPAWCCR 401 RC+ C Q QR +L PG ++P G P P G FP CR Sbjct: 441 RCAECGQSFRQRSNLLQHQRIHGDPPGPGAKPPAPPGAPEPPGPFPCSECR 491
>AT1A1_SHEEP (P04074) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1021 Score = 28.9 bits (63), Expect = 7.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +2 Query: 35 CVGMS*VLHIHMQKQIWWFCKRPNPIL 115 C GM L ++ K WWFC P +L Sbjct: 969 CPGMGVALRMYPLKPTWWFCAFPYSLL 995
>AT1A1_PIG (P05024) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1021 Score = 28.9 bits (63), Expect = 7.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +2 Query: 35 CVGMS*VLHIHMQKQIWWFCKRPNPIL 115 C GM L ++ K WWFC P +L Sbjct: 969 CPGMGVALRMYPLKPTWWFCAFPYSLL 995
>AT1A1_HORSE (P18907) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1021 Score = 28.9 bits (63), Expect = 7.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +2 Query: 35 CVGMS*VLHIHMQKQIWWFCKRPNPIL 115 C GM L ++ K WWFC P +L Sbjct: 969 CPGMGVALRMYPLKPTWWFCAFPYSLL 995
>AT1A1_CHICK (P09572) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1021 Score = 28.9 bits (63), Expect = 7.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +2 Query: 35 CVGMS*VLHIHMQKQIWWFCKRPNPIL 115 C GM L ++ K WWFC P +L Sbjct: 969 CPGMDVALRMYPLKPTWWFCAFPYSLL 995
>AT1A1_CANFA (P50997) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1021 Score = 28.9 bits (63), Expect = 7.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +2 Query: 35 CVGMS*VLHIHMQKQIWWFCKRPNPIL 115 C GM L ++ K WWFC P +L Sbjct: 969 CPGMGVALRMYPLKPTWWFCAFPYSLL 995
>AT1A1_RAT (P06685) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1023 Score = 28.9 bits (63), Expect = 7.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +2 Query: 35 CVGMS*VLHIHMQKQIWWFCKRPNPIL 115 C GM L ++ K WWFC P +L Sbjct: 971 CPGMGAALRMYPLKPTWWFCAFPYSLL 997
>AT1A1_MOUSE (Q8VDN2) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1023 Score = 28.9 bits (63), Expect = 7.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +2 Query: 35 CVGMS*VLHIHMQKQIWWFCKRPNPIL 115 C GM L ++ K WWFC P +L Sbjct: 971 CPGMGAALRMYPLKPTWWFCAFPYSLL 997
>AT1A1_HUMAN (P05023) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1023 Score = 28.9 bits (63), Expect = 7.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +2 Query: 35 CVGMS*VLHIHMQKQIWWFCKRPNPIL 115 C GM L ++ K WWFC P +L Sbjct: 971 CPGMGVALRMYPLKPTWWFCAFPYSLL 997
>AT1A1_BUFMA (P30714) Sodium/potassium-transporting ATPase alpha-1 chain precursor| (EC 3.6.3.9) (Sodium pump 1) (Na+/K+ ATPase 1) Length = 1023 Score = 28.9 bits (63), Expect = 7.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +2 Query: 35 CVGMS*VLHIHMQKQIWWFCKRPNPIL 115 C GM L ++ K WWFC P +L Sbjct: 971 CPGMDVALRMYPLKPTWWFCAFPYSLL 997 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,498,914 Number of Sequences: 219361 Number of extensions: 1456192 Number of successful extensions: 3563 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3411 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3549 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
