>PSBR_SPIOL (P10690) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 140

 Score = 98.6 bits (244), Expect = 4e-21
 Identities = 49/75 (65%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
 Frame = +3

Query: 6   KKIKVDKPXXXXXXXTX--DIDANGXKVGKKGVYQFVDKYGANVDGYSPIYTPEEWSESG 179
           KKIKVDKP            +D++G K   KGVYQFVDKYGANVDGYSPIY  EEW+ +G
Sbjct: 45  KKIKVDKPLGIGGGMKLRDGVDSSGRKPTGKGVYQFVDKYGANVDGYSPIYNEEEWAPTG 104

Query: 180 DRYAGGTTGLXIWAV 224
           D YAGGTTGL IWAV
Sbjct: 105 DVYAGGTTGLLIWAV 119

>PSBR_TOBAC (Q40519) Photosystem II 10 kDa polypeptide, chloroplast precursor|
           (PII10)
          Length = 136

 Score = 97.4 bits (241), Expect = 9e-21
 Identities = 47/75 (62%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
 Frame = +3

Query: 6   KKIKVDKPXXXXXXXTX--DIDANGXKVGKKGVYQFVDKYGANVDGYSPIYTPEEWSESG 179
           KK+K DKP       +    +DA+G K   KGVYQFVDKYGANVDGYSPIY  ++WS SG
Sbjct: 41  KKLKTDKPYGINGSMSLRDGVDASGRKQKGKGVYQFVDKYGANVDGYSPIYNTDDWSPSG 100

Query: 180 DRYAGGTTGLXIWAV 224
           D Y GGTTGL IWAV
Sbjct: 101 DVYVGGTTGLAIWAV 115

>PSBR_SOLTU (P06183) Photosystem II 10 kDa polypeptide, chloroplast precursor|
           (Light-inducible tissue-specific ST-LS1 protein)
          Length = 138

 Score = 97.1 bits (240), Expect = 1e-20
 Identities = 47/75 (62%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
 Frame = +3

Query: 6   KKIKVDKPXXXXXXXTX--DIDANGXKVGKKGVYQFVDKYGANVDGYSPIYTPEEWSESG 179
           KK+K DKP            +DA+G K   KGVYQ+VDKYGANVDGYSPIY  +EWS SG
Sbjct: 43  KKLKTDKPYGINGSMALRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSG 102

Query: 180 DRYAGGTTGLXIWAV 224
           D Y GGTTGL IWAV
Sbjct: 103 DVYVGGTTGLAIWAV 117

>PSBR_LYCES (Q40163) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 138

 Score = 97.1 bits (240), Expect = 1e-20
 Identities = 47/75 (62%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
 Frame = +3

Query: 6   KKIKVDKPXXXXXXXTX--DIDANGXKVGKKGVYQFVDKYGANVDGYSPIYTPEEWSESG 179
           KK+K DKP            +DA+G K   KGVYQ+VDKYGANVDGYSPIY  +EWS SG
Sbjct: 43  KKLKTDKPYGINGSMALRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSG 102

Query: 180 DRYAGGTTGLXIWAV 224
           D Y GGTTGL IWAV
Sbjct: 103 DVYVGGTTGLAIWAV 117

>PSBR_HORVU (Q40070) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 138

 Score = 92.0 bits (227), Expect = 4e-19
 Identities = 41/55 (74%), Positives = 44/55 (80%)
 Frame = +3

Query: 60  IDANGXKVGKKGVYQFVDKYGANVDGYSPIYTPEEWSESGDRYAGGTTGLXIWAV 224
           +DA+G     KGVYQF DKYGANVDGYSPIYTPEEWS SGD Y GG TGL +WAV
Sbjct: 63  VDASGRVAKGKGVYQFADKYGANVDGYSPIYTPEEWSPSGDVYVGGKTGLFLWAV 117

>PSBR_BRACM (P49108) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 141

 Score = 91.7 bits (226), Expect = 5e-19
 Identities = 46/75 (61%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
 Frame = +3

Query: 6   KKIKVDKPXXXXXXXTX--DIDANGXKVGKKGVYQFVDKYGANVDGYSPIYTPEEWSESG 179
           KKIK DKP            +DA+G K    GVY+FVDKYGANVDGYSPIY  +EWS SG
Sbjct: 46  KKIKTDKPFGVNGSMDLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASG 105

Query: 180 DRYAGGTTGLXIWAV 224
           D Y GG TGL IWAV
Sbjct: 106 DVYKGGVTGLAIWAV 120

>PSBR_ARATH (P27202) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 140

 Score = 89.7 bits (221), Expect = 2e-18
 Identities = 45/75 (60%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
 Frame = +3

Query: 6   KKIKVDKPXXXXXXXTX--DIDANGXKVGKKGVYQFVDKYGANVDGYSPIYTPEEWSESG 179
           KKIK DKP            +DA+G K    GVY++VDKYGANVDGYSPIY   EWS SG
Sbjct: 45  KKIKTDKPFGINGSMDLRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASG 104

Query: 180 DRYAGGTTGLXIWAV 224
           D Y GG TGL IWAV
Sbjct: 105 DVYKGGVTGLAIWAV 119

>PSBR_WHEAT (P12358) Photosystem II 10 kDa polypeptide (Fragment)|
          Length = 24

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = +3

Query: 3  GKKIKVDKPXXXXXXXTXDIDA 68
          GKKIKVDKP       T DIDA
Sbjct: 3  GKKIKVDKPLGLGGGLTVDIDA 24

>TOR1_YEAST (P35169) Phosphatidylinositol 3-kinase TOR1 (EC 2.7.1.137)|
            (PtdIns-3-kinase TOR1) (PI3-kinase TOR1) (PI3K TOR1)
          Length = 2470

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +3

Query: 63   DANGXKVGKKGVYQFVDKYGANVDGYSPIYTPE 161
            D +  KV  + V + ++ +G N++GYS + TP+
Sbjct: 1046 DKSSDKVLSRRVLRLLESFGPNLEGYSHLITPK 1078


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.308    0.127    0.361 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,527,175
Number of Sequences: 219361
Number of extensions: 251560
Number of successful extensions: 634
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)