| Clone Name | basd25h22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 208 bits (105), Expect = 5e-51 Identities = 184/213 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| ||||| ||||||||| ||||||||||||| ||||| || || ||||| |||||| Sbjct: 26203789 acaaagagggtattcccccagaccagcaaaggctgattttcgcagggaagcaactggaag 26203848 Query: 61 atgggcgaacattagctgattacaacattcagaaagagtnttntntccatttggtcctga 120 |||| || ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 26203849 atggacgtacattagctgattacaacattcagaaagagtcaacgctccatttggtcctga 26203908 Query: 121 ggctcangggtggaactatgatnanggtgaagacacttnctgggaaggaaattgagattg 180 |||||| ||||||||| ||||| | |||||||||||| ||||||||||||| ||||| | Sbjct: 26203909 ggctcaggggtggaaccatgatcaaggtgaagacactcactgggaaggaaatcgagatcg 26203968 Query: 181 atattgagcccactgacacaatcgatagaatca 213 | |||||||||||||| || || |||||||||| Sbjct: 26203969 acattgagcccactgataccattgatagaatca 26204001 Score = 48.1 bits (24), Expect = 0.011 Identities = 80/99 (80%) Strand = Plus / Minus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| |||||||| ||||||| | || || ||||| | |||||| | || | Sbjct: 27575352 acaaggagggaattcccccggaccagcagcgcctcatctttgcagacaagcagctcgagg 27575293 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || ||| | |||||||||||||||||||| |||| Sbjct: 27575292 atggacgtacactggctgattacaacattcagaaggagt 27575254 Score = 42.1 bits (21), Expect = 0.68 Identities = 26/28 (92%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagca 28 ||||||||||||| |||||| ||||||| Sbjct: 28019482 acaaggagggcatccccccagaccagca 28019509 Score = 42.1 bits (21), Expect = 0.68 Identities = 44/52 (84%) Strand = Plus / Minus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagca 52 |||||||||||||||| || |||||||| | || || |||||||| ||||| Sbjct: 27575580 acaaggagggcattccacctgaccagcaacgtctcatctttgctggcaagca 27575529 Score = 40.1 bits (20), Expect = 2.7 Identities = 79/99 (79%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||| ||||| ||||||| | || || |||||||| |||||| | || | Sbjct: 28020394 acaaggagggcatccccccggaccagcagcgtctgatctttgctggtaagcagcttgagg 28020453 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | || ||||||||||| ||||| |||| Sbjct: 28020454 atggccgcacccttgcggattacaacatccagaaggagt 28020492
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 208 bits (105), Expect = 5e-51 Identities = 184/213 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| ||||| ||||||||| ||||||||||||| ||||| || || ||||| |||||| Sbjct: 68329 acaaagagggtattcccccagaccagcaaaggctgattttcgcagggaagcaactggaag 68388 Query: 61 atgggcgaacattagctgattacaacattcagaaagagtnttntntccatttggtcctga 120 |||| || ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 68389 atggacgtacattagctgattacaacattcagaaagagtcaacgctccatttggtcctga 68448 Query: 121 ggctcangggtggaactatgatnanggtgaagacacttnctgggaaggaaattgagattg 180 |||||| ||||||||| ||||| | |||||||||||| ||||||||||||| ||||| | Sbjct: 68449 ggctcaggggtggaaccatgatcaaggtgaagacactcactgggaaggaaatcgagatcg 68508 Query: 181 atattgagcccactgacacaatcgatagaatca 213 | |||||||||||||| || || |||||||||| Sbjct: 68509 acattgagcccactgataccattgatagaatca 68541
>dbj|AK062354.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-G08, full insert sequence Length = 832 Score = 208 bits (105), Expect = 5e-51 Identities = 184/213 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| ||||| ||||||||| ||||||||||||| ||||| || || ||||| |||||| Sbjct: 240 acaaagagggtattcccccagaccagcaaaggctgattttcgcagggaagcaactggaag 299 Query: 61 atgggcgaacattagctgattacaacattcagaaagagtnttntntccatttggtcctga 120 |||| || ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 300 atggacgtacattagctgattacaacattcagaaagagtcaacgctccatttggtcctga 359 Query: 121 ggctcangggtggaactatgatnanggtgaagacacttnctgggaaggaaattgagattg 180 |||||| ||||||||| ||||| | |||||||||||| ||||||||||||| ||||| | Sbjct: 360 ggctcaggggtggaaccatgatcaaggtgaagacactcactgggaaggaaatcgagatcg 419 Query: 181 atattgagcccactgacacaatcgatagaatca 213 | |||||||||||||| || || |||||||||| Sbjct: 420 acattgagcccactgataccattgatagaatca 452
>ref|NM_129118.3| Arabidopsis thaliana UBQ7 AT2G35635 (UBQ7) mRNA, complete cds Length = 688 Score = 123 bits (62), Expect = 2e-25 Identities = 130/155 (83%) Strand = Plus / Plus Query: 30 aggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacatt 89 ||||| ||||||||||| ||||| ||||||||||| || || ||||||||||||||||| Sbjct: 174 aggctgatttttgctggtaagcaattggaagatggccggaccttagctgattacaacatc 233 Query: 90 cagaaagagtnttntntccatttggtcctgaggctcangggtggaactatgatnanggtg 149 |||||||||| | | | ||| | ||||| ||||||| |||||||| ||||| | |||| Sbjct: 234 cagaaagagtctactcttcatcttgtcctcaggctcagaggtggaaccatgatcaaggtg 293 Query: 150 aagacacttnctgggaaggaaattgagattgatat 184 |||||||| |||| || ||||| ||||||||||| Sbjct: 294 aagacactcactggaaaagaaatcgagattgatat 328
>gb|AC006068.4| Arabidopsis thaliana chromosome 2 clone T20F21 map ve016, complete sequence Length = 107436 Score = 123 bits (62), Expect = 2e-25 Identities = 130/155 (83%) Strand = Plus / Minus Query: 30 aggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacatt 89 ||||| ||||||||||| ||||| ||||||||||| || || ||||||||||||||||| Sbjct: 62715 aggctgatttttgctggtaagcaattggaagatggccggaccttagctgattacaacatc 62656 Query: 90 cagaaagagtnttntntccatttggtcctgaggctcangggtggaactatgatnanggtg 149 |||||||||| | | | ||| | ||||| ||||||| |||||||| ||||| | |||| Sbjct: 62655 cagaaagagtctactcttcatcttgtcctcaggctcagaggtggaaccatgatcaaggtg 62596 Query: 150 aagacacttnctgggaaggaaattgagattgatat 184 |||||||| |||| || ||||| ||||||||||| Sbjct: 62595 aagacactcactggaaaagaaatcgagattgatat 62561
>gb|AY093802.1| Arabidopsis thaliana At1g31340/T19E23_4 mRNA, complete cds Length = 465 Score = 123 bits (62), Expect = 2e-25 Identities = 130/155 (83%) Strand = Plus / Plus Query: 30 aggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacatt 89 ||||| ||||||||||| ||||| ||||||||||| || || ||||||||||||||||| Sbjct: 124 aggctgatttttgctggtaagcaattggaagatggccggaccttagctgattacaacatc 183 Query: 90 cagaaagagtnttntntccatttggtcctgaggctcangggtggaactatgatnanggtg 149 |||||||||| | | | ||| | ||||| ||||||| |||||||| ||||| | |||| Sbjct: 184 cagaaagagtctactcttcatcttgtcctcaggctcagaggtggaaccatgatcaaggtg 243 Query: 150 aagacacttnctgggaaggaaattgagattgatat 184 |||||||| |||| || ||||| ||||||||||| Sbjct: 244 aagacactcactggaaaagaaatcgagattgatat 278
>gb|AY074850.1| Arabidopsis thaliana At1g31340/T19E23_4 mRNA, complete cds Length = 641 Score = 123 bits (62), Expect = 2e-25 Identities = 130/155 (83%) Strand = Plus / Plus Query: 30 aggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacatt 89 ||||| ||||||||||| ||||| ||||||||||| || || ||||||||||||||||| Sbjct: 174 aggctgatttttgctggtaagcaattggaagatggccggaccttagctgattacaacatc 233 Query: 90 cagaaagagtnttntntccatttggtcctgaggctcangggtggaactatgatnanggtg 149 |||||||||| | | | ||| | ||||| ||||||| |||||||| ||||| | |||| Sbjct: 234 cagaaagagtctactcttcatcttgtcctcaggctcagaggtggaaccatgatcaaggtg 293 Query: 150 aagacacttnctgggaaggaaattgagattgatat 184 |||||||| |||| || ||||| ||||||||||| Sbjct: 294 aagacactcactggaaaagaaatcgagattgatat 328
>dbj|AK118678.1| Arabidopsis thaliana mRNA for ubiquitin-like protein, complete cds, clone: RAFL19-95-A01 Length = 660 Score = 123 bits (62), Expect = 2e-25 Identities = 130/155 (83%) Strand = Plus / Plus Query: 30 aggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacatt 89 ||||| ||||||||||| ||||| ||||||||||| || || ||||||||||||||||| Sbjct: 174 aggctgatttttgctggtaagcaattggaagatggccggaccttagctgattacaacatc 233 Query: 90 cagaaagagtnttntntccatttggtcctgaggctcangggtggaactatgatnanggtg 149 |||||||||| | | | ||| | ||||| ||||||| |||||||| ||||| | |||| Sbjct: 234 cagaaagagtctactcttcatcttgtcctcaggctcagaggtggaaccatgatcaaggtg 293 Query: 150 aagacacttnctgggaaggaaattgagattgatat 184 |||||||| |||| || ||||| ||||||||||| Sbjct: 294 aagacactcactggaaaagaaatcgagattgatat 328
>gb|L05364.1|ATHUBQ7G Arabidopsis thaliana polyubiquitin (ubq7) gene sequence Length = 1585 Score = 123 bits (62), Expect = 2e-25 Identities = 130/155 (83%) Strand = Plus / Plus Query: 30 aggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacatt 89 ||||| ||||||||||| ||||| ||||||||||| || || ||||||||||||||||| Sbjct: 1047 aggctgatttttgctggtaagcaattggaagatggccggaccttagctgattacaacatc 1106 Query: 90 cagaaagagtnttntntccatttggtcctgaggctcangggtggaactatgatnanggtg 149 |||||||||| | | | ||| | ||||| ||||||| |||||||| ||||| | |||| Sbjct: 1107 cagaaagagtctactcttcatcttgtcctcaggctcagaggtggaaccatgatcaaggtg 1166 Query: 150 aagacacttnctgggaaggaaattgagattgatat 184 |||||||| |||| || ||||| ||||||||||| Sbjct: 1167 aagacactcactggaaaagaaatcgagattgatat 1201
>gb|AY090541.1| Deschampsia antarctica clone Dacor 1.0 polyubiquitin 2 mRNA, complete cds Length = 831 Score = 113 bits (57), Expect = 2e-22 Identities = 140/170 (82%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagag 98 |||||||| ||||||||||||||||| || ||| | ||||||||||| ||||| || ||| Sbjct: 253 tttgctggcaagcagttggaagatggacgcacacttgctgattacaatattcaaaaggag 312 Query: 99 tnttntntccatttggtcctgaggctcangggtggaactatgatnanggtgaagacactt 158 | | | | || |||||||| ||||||| ||| || |||||||| | ||| |||||||| Sbjct: 313 tctactcttcacttggtcctcaggctcaggggcggtactatgatcaaggttaagacactc 372 Query: 159 nctgggaaggaaattgagattgatattgagcccactgacacaatcgatag 208 |||| ||||| || || ||||| ||||||||||||||||| || ||||| Sbjct: 373 actggaaaggagatcgaaattgacattgagcccactgacacgattgatag 422
>gb|L81139.1| Pisum sativum (Alaska) ubiquitin (PUB1) gene, complete cds Length = 2536 Score = 109 bits (55), Expect = 4e-21 Identities = 84/94 (89%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||||||||| ||||||||||||||||| | |||| Sbjct: 1595 acaaggagggcattcccccagaccagcaaaggctgatttttgctggaaagcaactcgaag 1654 Query: 61 atgggcgaacattagctgattacaacattcagaa 94 |||| ||||| || ||||||||||| || ||||| Sbjct: 1655 atggccgaactttggctgattacaatatccagaa 1688 Score = 79.8 bits (40), Expect = 3e-12 Identities = 84/99 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| |||||||| ||||||| | || |||||||||||||||||| |||| | Sbjct: 911 acaaggaggggattccccccgaccagcagcgtctcatttttgctggaaagcagctggagg 970 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 | |||||||| | |||||||||||||| ||||| |||| Sbjct: 971 acgggcgaacccttgctgattacaacatccagaaggagt 1009 Score = 71.9 bits (36), Expect = 8e-10 Identities = 66/76 (86%) Strand = Plus / Plus Query: 24 cagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattac 83 ||||| ||||| || |||||||| || ||| | |||||||| ||||| ||||| |||||| Sbjct: 1162 cagcagaggcttatatttgctggtaaacagcttgaagatggccgaactttagcagattac 1221 Query: 84 aacattcagaaagagt 99 |||||||||||||||| Sbjct: 1222 aacattcagaaagagt 1237 Score = 71.9 bits (36), Expect = 8e-10 Identities = 83/99 (83%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| || ||||| ||| ||||||| | || |||||||||||||||||| |||| | Sbjct: 683 acaaggaagggattccaccagaccagcagcgtctcatttttgctggaaagcagctggagg 742 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 | ||| |||| || |||||||||||||| ||||| |||| Sbjct: 743 acgggagaaccttggctgattacaacatccagaaggagt 781 Score = 40.1 bits (20), Expect = 2.7 Identities = 79/99 (79%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| || || ||| | ||||| ||| | || |||||||| ||||| ||||| | Sbjct: 1823 acaaggagggaatcccaccagatcagcagaggttgatctttgctgggaagcaattggagg 1882 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| | || | ||||| || |||||||||||||||| Sbjct: 1883 atggaaggacccttgctgactataacattcagaaagagt 1921
>ref|NM_102873.3| Arabidopsis thaliana RUB1 (RELATED TO UBIQUITIN 1) AT1G31340 (RUB1) mRNA, complete cds Length = 702 Score = 105 bits (53), Expect = 5e-20 Identities = 121/146 (82%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagag 98 |||||||| |||||| | |||||||| |||||||||| |||||||||||||||||||| Sbjct: 172 tttgctggtaagcagcttgaagatggtagaacattagcggattacaacattcagaaagaa 231 Query: 99 tnttntntccatttggtcctgaggctcangggtggaactatgatnanggtgaagacactt 158 | | | || ||||| ||||||| | |||||| |||||||| | ||||||||| || Sbjct: 232 tcgactcttcacttggtattgaggcttaggggtgggactatgattaaggtgaagactctc 291 Query: 159 nctgggaaggaaattgagattgatat 184 | ||||||||||||||||||||||| Sbjct: 292 acagggaaggaaattgagattgatat 317
>gb|BT006110.1| Arabidopsis thaliana clone U50103 putative ubiquitin (AtRUB1) (At1g31340) mRNA, complete cds Length = 502 Score = 105 bits (53), Expect = 5e-20 Identities = 121/146 (82%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagag 98 |||||||| |||||| | |||||||| |||||||||| |||||||||||||||||||| Sbjct: 133 tttgctggtaagcagcttgaagatggtagaacattagcggattacaacattcagaaagaa 192 Query: 99 tnttntntccatttggtcctgaggctcangggtggaactatgatnanggtgaagacactt 158 | | | || ||||| ||||||| | |||||| |||||||| | ||||||||| || Sbjct: 193 tcgactcttcacttggtattgaggcttaggggtgggactatgattaaggtgaagactctc 252 Query: 159 nctgggaaggaaattgagattgatat 184 | ||||||||||||||||||||||| Sbjct: 253 acagggaaggaaattgagattgatat 278
>gb|BT005749.1| Arabidopsis thaliana clone RAFL15-38-H20 (R50103) putative ubiquitin (AtRUB1) (At1g31340) mRNA, complete cds Length = 742 Score = 105 bits (53), Expect = 5e-20 Identities = 121/146 (82%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagag 98 |||||||| |||||| | |||||||| |||||||||| |||||||||||||||||||| Sbjct: 172 tttgctggtaagcagcttgaagatggtagaacattagcggattacaacattcagaaagaa 231 Query: 99 tnttntntccatttggtcctgaggctcangggtggaactatgatnanggtgaagacactt 158 | | | || ||||| ||||||| | |||||| |||||||| | ||||||||| || Sbjct: 232 tcgactcttcacttggtattgaggcttaggggtgggactatgattaaggtgaagactctc 291 Query: 159 nctgggaaggaaattgagattgatat 184 | ||||||||||||||||||||||| Sbjct: 292 acagggaaggaaattgagattgatat 317
>gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis thaliana BAC T19E23 from chromosome I, complete sequence Length = 87618 Score = 105 bits (53), Expect = 5e-20 Identities = 121/146 (82%) Strand = Plus / Minus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagag 98 |||||||| |||||| | |||||||| |||||||||| |||||||||||||||||||| Sbjct: 59373 tttgctggtaagcagcttgaagatggtagaacattagcggattacaacattcagaaagaa 59314 Query: 99 tnttntntccatttggtcctgaggctcangggtggaactatgatnanggtgaagacactt 158 | | | || ||||| ||||||| | |||||| |||||||| | ||||||||| || Sbjct: 59313 tcgactcttcacttggtattgaggcttaggggtgggactatgattaaggtgaagactctc 59254 Query: 159 nctgggaaggaaattgagattgatat 184 | ||||||||||||||||||||||| Sbjct: 59253 acagggaaggaaattgagattgatat 59228
>emb|X17020.1|PISUMPUI Pea PU1 gene mRNA for polyubiquitin Length = 1241 Score = 103 bits (52), Expect = 2e-19 Identities = 87/99 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| || || ||| ||||||||||| | |||||||||||||||||| | |||| Sbjct: 798 acaaggagggtatccctccagaccagcaaaggttgatttttgctggaaagcagcttgaag 857 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| ||||| || |||||||||||||||||||| |||| Sbjct: 858 atggccgaactttggctgattacaacattcagaaggagt 896 Score = 99.6 bits (50), Expect = 3e-18 Identities = 85/97 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| ||||| ||| ||||||||||| | |||||||||||||||||| | |||| Sbjct: 570 acaaggagggtattcctccagaccagcaaaggttgatttttgctggaaagcagctcgaag 629 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 |||| ||||| || || || ||||||||||||||||| Sbjct: 630 atggccgaactttggccgactacaacattcagaaaga 666 Score = 75.8 bits (38), Expect = 5e-11 Identities = 82/97 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| ||||||||||||||| |||| |||||||| || |||||||| || ||| | |||| Sbjct: 342 acaaagagggcattcccccagaccaacaaaggctcatctttgctggcaaacagctcgaag 401 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 |||| |||| || || ||||||||||| |||||||| Sbjct: 402 atggcagaactttggccgattacaacatccagaaaga 438 Score = 40.1 bits (20), Expect = 2.7 Identities = 79/99 (79%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| || || ||| | ||||| ||| | || |||||||| ||||| ||||| | Sbjct: 1026 acaaggagggaatcccaccagatcagcagaggttgatctttgctgggaagcaattggagg 1085 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| | || | ||||| |||||||||||||| |||| Sbjct: 1086 atggaaggactcttgctgactacaacattcagaaggagt 1124 Score = 40.1 bits (20), Expect = 2.7 Identities = 53/64 (82%) Strand = Plus / Plus Query: 36 atttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaa 95 ||||||||||| ||||| | || |||||||| || | |||||||||||||| ||||| Sbjct: 149 atttttgctggcaagcaactcgaggatgggcgtactcttgctgattacaacatacagaag 208 Query: 96 gagt 99 |||| Sbjct: 209 gagt 212
>gb|L81141.1| Pisum sativum (Alaska) ubiquitin (PUB3) gene, complete cds Length = 2544 Score = 103 bits (52), Expect = 2e-19 Identities = 87/99 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| || |||||| ||||||||||| | |||||||||||||||||| | |||| Sbjct: 1574 acaaggagggtatccccccagaccagcaaaggttgatttttgctggaaagcagctcgaag 1633 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| |||| |||||||||||||||| |||||||||| Sbjct: 1634 atggcagaactctagctgattacaacatccagaaagagt 1672 Score = 95.6 bits (48), Expect = 5e-17 Identities = 86/99 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| || |||||| ||||||||||| | |||||||| || |||||| | |||| Sbjct: 1802 acaaggagggtatccccccagaccagcaaaggttgatttttgcggggaagcagctcgaag 1861 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| |||||||| |||||||| ||||||||||| |||| Sbjct: 1862 atggccgaacattggctgattataacattcagaaggagt 1900 Score = 71.9 bits (36), Expect = 8e-10 Identities = 66/76 (86%) Strand = Plus / Plus Query: 24 cagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattac 83 ||||||||||| || ||||||||||| ||| | |||||||| ||||| | ||||||||| Sbjct: 1369 cagcaaaggcttatctttgctggaaaacagcttgaagatggccgaaccctggctgattac 1428 Query: 84 aacattcagaaagagt 99 ||||| |||||||||| Sbjct: 1429 aacatacagaaagagt 1444 Score = 48.1 bits (24), Expect = 0.011 Identities = 80/99 (80%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| || || ||| | ||||| ||| | || |||||||| ||||| ||||| | Sbjct: 2030 acaaggagggaatcccaccagatcagcagaggttgatctttgctgggaagcaattggagg 2089 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| | || | |||||||||||||||||||| |||| Sbjct: 2090 atggtaggacccttgctgattacaacattcagaaggagt 2128
>gb|L81140.1| Pisum sativum (Alaska) ubiquitin (PUB2) gene, complete cds Length = 2482 Score = 103 bits (52), Expect = 2e-19 Identities = 87/99 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| || || ||| ||||||||||| | |||||||||||||||||| | |||| Sbjct: 1698 acaaggagggtatccctccagaccagcaaaggttgatttttgctggaaagcagcttgaag 1757 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| ||||| || |||||||||||||||||||| |||| Sbjct: 1758 atggccgaactttggctgattacaacattcagaaggagt 1796 Score = 91.7 bits (46), Expect = 8e-16 Identities = 84/97 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| ||||| ||| ||||||||||||| || ||||| ||||||||| | |||| Sbjct: 1242 acaaggagggtattccaccagaccagcaaaggctcatctttgccggaaagcagcttgaag 1301 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 |||| ||||| || || ||||||||||| |||||||| Sbjct: 1302 atggccgaactttggccgattacaacatccagaaaga 1338 Score = 83.8 bits (42), Expect = 2e-13 Identities = 83/97 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| ||||| ||| ||||||||||| | ||||||||||| |||||| | |||| Sbjct: 1470 acaaggagggtattcctccagaccagcaaaggttgatttttgctggcaagcagctcgaag 1529 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 |||| ||||| || || || |||||||| |||||||| Sbjct: 1530 atggccgaactttggccgactacaacatccagaaaga 1566 Score = 75.8 bits (38), Expect = 5e-11 Identities = 82/97 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| ||||||||||||||| |||| |||||||| || |||||||| || ||| | |||| Sbjct: 1014 acaaagagggcattcccccagaccaacaaaggctcatctttgctggcaaacagctcgaag 1073 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 |||| |||| || || ||||||||||| |||||||| Sbjct: 1074 atggcagaactttggccgattacaacatccagaaaga 1110 Score = 40.1 bits (20), Expect = 2.7 Identities = 79/99 (79%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| || || ||| | ||||| ||| | || |||||||| ||||| ||||| | Sbjct: 1926 acaaggagggaatcccaccagatcagcagaggttgatctttgctgggaagcaattggagg 1985 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| | || | ||||| |||||||||||||| |||| Sbjct: 1986 atggaaggactcttgctgactacaacattcagaaggagt 2024 Score = 40.1 bits (20), Expect = 2.7 Identities = 53/64 (82%) Strand = Plus / Plus Query: 36 atttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaa 95 ||||||||||| ||||| | || |||||||| || | |||||||||||||| ||||| Sbjct: 821 atttttgctggcaagcaactcgaggatgggcgtactcttgctgattacaacatacagaag 880 Query: 96 gagt 99 |||| Sbjct: 881 gagt 884
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 97.6 bits (49), Expect = 1e-17 Identities = 135/166 (81%) Strand = Plus / Plus Query: 48 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtnttntntc 107 |||||| ||||||||||||| ||| | || || |||||||||||||| |||| | | Sbjct: 15107565 aagcagctggaagatgggcgcacactggccgactacaacattcagaaggagtcaactctt 15107624 Query: 108 catttggtcctgaggctcangggtggaactatgatnanggtgaagacacttnctgggaag 167 || |||||||| ||||||| |||||| |||||||| | ||| ||||| || |||| || Sbjct: 15107625 cacttggtcctcaggctcaggggtggcactatgatcaaggttaagaccctcactggaaaa 15107684 Query: 168 gaaattgagattgatattgagcccactgacacaatcgatagaatca 213 || ||||| ||||| ||||||||||| ||||| |||||||| |||| Sbjct: 15107685 gagattgaaattgacattgagcccaccgacacgatcgataggatca 15107730
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 97.6 bits (49), Expect = 1e-17 Identities = 135/166 (81%) Strand = Plus / Plus Query: 48 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtnttntntc 107 |||||| ||||||||||||| ||| | || || |||||||||||||| |||| | | Sbjct: 1541 aagcagctggaagatgggcgcacactggccgactacaacattcagaaggagtcaactctt 1600 Query: 108 catttggtcctgaggctcangggtggaactatgatnanggtgaagacacttnctgggaag 167 || |||||||| ||||||| |||||| |||||||| | ||| ||||| || |||| || Sbjct: 1601 cacttggtcctcaggctcaggggtggcactatgatcaaggttaagaccctcactggaaaa 1660 Query: 168 gaaattgagattgatattgagcccactgacacaatcgatagaatca 213 || ||||| ||||| ||||||||||| ||||| |||||||| |||| Sbjct: 1661 gagattgaaattgacattgagcccaccgacacgatcgataggatca 1706
>dbj|AP005426.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0668D04 Length = 148848 Score = 97.6 bits (49), Expect = 1e-17 Identities = 135/166 (81%) Strand = Plus / Plus Query: 48 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtnttntntc 107 |||||| ||||||||||||| ||| | || || |||||||||||||| |||| | | Sbjct: 99208 aagcagctggaagatgggcgcacactggccgactacaacattcagaaggagtcaactctt 99267 Query: 108 catttggtcctgaggctcangggtggaactatgatnanggtgaagacacttnctgggaag 167 || |||||||| ||||||| |||||| |||||||| | ||| ||||| || |||| || Sbjct: 99268 cacttggtcctcaggctcaggggtggcactatgatcaaggttaagaccctcactggaaaa 99327 Query: 168 gaaattgagattgatattgagcccactgacacaatcgatagaatca 213 || ||||| ||||| ||||||||||| ||||| |||||||| |||| Sbjct: 99328 gagattgaaattgacattgagcccaccgacacgatcgataggatca 99373
>dbj|AK099513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029K20, full insert sequence Length = 795 Score = 97.6 bits (49), Expect = 1e-17 Identities = 135/166 (81%) Strand = Plus / Plus Query: 48 aagcagttggaagatgggcgaacattagctgattacaacattcagaaagagtnttntntc 107 |||||| ||||||||||||| ||| | || || |||||||||||||| |||| | | Sbjct: 295 aagcagctggaagatgggcgcacactggccgactacaacattcagaaggagtcaactctt 354 Query: 108 catttggtcctgaggctcangggtggaactatgatnanggtgaagacacttnctgggaag 167 || |||||||| ||||||| |||||| |||||||| | ||| ||||| || |||| || Sbjct: 355 cacttggtcctcaggctcaggggtggcactatgatcaaggttaagaccctcactggaaaa 414 Query: 168 gaaattgagattgatattgagcccactgacacaatcgatagaatca 213 || ||||| ||||| ||||||||||| ||||| |||||||| |||| Sbjct: 415 gagattgaaattgacattgagcccaccgacacgatcgataggatca 460
>gb|DQ216235.1| Taeniopygia guttata clone 0058P0048G02 ubiquitin C variant 1-like mRNA, complete sequence Length = 1305 Score = 95.6 bits (48), Expect = 5e-17 Identities = 62/67 (92%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| ||||||||||| |||||| |||||| Sbjct: 848 acaaggagggcattcccccagaccagcagaggctgatttttgctggcaagcagctggaag 907 Query: 61 atgggcg 67 ||||||| Sbjct: 908 atgggcg 914 Score = 79.8 bits (40), Expect = 3e-12 Identities = 60/67 (89%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| || |||||||| |||||| |||| | Sbjct: 163 acaaggagggcattcccccagaccagcagaggctgatctttgctggcaagcagctggagg 222 Query: 61 atgggcg 67 ||||||| Sbjct: 223 atgggcg 229 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| || ||||| || ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 391 acaaggaaggtattcctcctgaccagcagaggctgatctttgctggcaagcagctggaag 450 Query: 61 atgggcg 67 ||||||| Sbjct: 451 atgggcg 457 Score = 40.1 bits (20), Expect = 2.7 Identities = 59/72 (81%) Strand = Plus / Plus Query: 24 cagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattac 83 ||||| ||||| || |||||||| |||||| |||| |||||||| || | | || ||| Sbjct: 642 cagcagaggctgatctttgctggcaagcagctggaggatgggcgcaccctgtccgactac 701 Query: 84 aacattcagaaa 95 |||||||||||| Sbjct: 702 aacattcagaaa 713
>gb|BT012724.1| Lycopersicon esculentum clone 113652F, mRNA sequence Length = 1579 Score = 95.6 bits (48), Expect = 5e-17 Identities = 86/99 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| ||||||| ||||| || ||||| ||||||||| | |||| Sbjct: 144 acaaggaaggcattcccccagaccagcagaggctgatctttgcaggaaagcagcttgaag 203 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 | || || || ||||||||||||||||||||||||||| Sbjct: 204 acggtcgtactctagctgattacaacattcagaaagagt 242 Score = 85.7 bits (43), Expect = 5e-14 Identities = 81/94 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| ||||| || || ||| ||||||||||| | ||||||||||| ||||||||||||| Sbjct: 1056 acaaagagggtatcccaccagaccagcaaaggttgatttttgctggcaagcagttggaag 1115 Query: 61 atgggcgaacattagctgattacaacattcagaa 94 |||| | |||||||| |||||||| |||||||| Sbjct: 1116 atggaaggacattagccgattacaatattcagaa 1149 Score = 52.0 bits (26), Expect = 7e-04 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcag 53 ||||||| |||||||||||| ||||||||||| | || ||||| || |||||| Sbjct: 600 acaaggaaggcattcccccagaccagcaaaggttgatctttgcgggcaagcag 652 Score = 52.0 bits (26), Expect = 7e-04 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcag 53 ||||||| |||||||||||| ||||||||||| | || ||||| || |||||| Sbjct: 372 acaaggaaggcattcccccagaccagcaaaggttgatctttgcgggcaagcag 424
>gb|DQ216238.1| Taeniopygia guttata clone 0058P0049B08 ubiquitin C variant 1-like mRNA, complete sequence Length = 735 Score = 93.7 bits (47), Expect = 2e-16 Identities = 85/98 (86%) Strand = Plus / Plus Query: 2 caaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaaga 61 ||||||||||||||||||| ||||||| ||| | ||||||||||| |||||||| ||||| Sbjct: 234 caaggagggcattcccccagaccagcagaggttgatttttgctggcaagcagttagaaga 293 Query: 62 tgggcgaacattagctgattacaacattcagaaagagt 99 |||||| || | | ||||||||||| |||||||||| Sbjct: 294 tgggcgcaccctgtccgattacaacatccagaaagagt 331
>gb|DQ216245.1| Taeniopygia guttata clone 0065P0025D10 ubiquitin C variant 5-like mRNA, complete sequence Length = 1438 Score = 91.7 bits (46), Expect = 8e-16 Identities = 84/97 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| ||||| ||||| |||||| |||||| Sbjct: 508 acaaggagggcattcccccagaccagcagaggctgattttcgctggcaagcagctggaag 567 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 ||||||| || | |||| |||||||| |||||||| Sbjct: 568 atgggcgcaccctgtctgactacaacatccagaaaga 604 Score = 79.8 bits (40), Expect = 3e-12 Identities = 60/67 (89%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| ||||||| ||||| ||||| ||||| |||||| |||||| Sbjct: 964 acaaggaaggcattcccccagaccagcagaggctgattttcgctggcaagcagctggaag 1023 Query: 61 atgggcg 67 ||||||| Sbjct: 1024 atgggcg 1030 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| ||||||| ||||| ||||| ||||| |||||| |||| | Sbjct: 736 acaaggaaggcattcccccagaccagcagaggctgattttcgctggtaagcagctggagg 795 Query: 61 atgg 64 |||| Sbjct: 796 atgg 799 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||||| ||||| || |||||||| |||||| ||||||||||||| Sbjct: 73 accagcagaggctgatctttgctggcaagcagctggaagatgggcg 118
>emb|AJ879118.2| Capsicum chinense mRNA for polyubiquitin (ubi gene) Length = 969 Score = 91.7 bits (46), Expect = 8e-16 Identities = 84/97 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| |||||||| ||||| |||||||| | Sbjct: 406 acaaggagggcattcccccagaccagcagaggcttatttttgcaggaaaacagttggagg 465 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 ||||||| || | ||||| || ||||| |||||||| Sbjct: 466 atgggcgcacccttgctgactataacatccagaaaga 502 Score = 61.9 bits (31), Expect = 7e-07 Identities = 54/62 (87%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||||||||| |||||| ||||||| ||||| || ||||| ||||||||| | |||||| Sbjct: 180 aaggagggcatccccccagaccagcagaggcttatctttgccggaaagcagctagaagat 239 Query: 63 gg 64 || Sbjct: 240 gg 241
>gb|DQ216241.1| Taeniopygia guttata clone 0058P0057E02 ubiquitin C variant 2-like mRNA, complete sequence Length = 1373 Score = 87.7 bits (44), Expect = 1e-14 Identities = 85/99 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 163 acaaggagggcattcccccagaccagcagaggctgatctttgctggtaagcagctggaag 222 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | |||| |||||||| |||||||||| Sbjct: 223 atggccgcaccctctctgactacaacatccagaaagagt 261 Score = 63.9 bits (32), Expect = 2e-07 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||| || || ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 847 acaaggagggcatccctcctgaccagcagaggctgatctttgctggcaagcagctggaag 906 Query: 61 atgggcg 67 ||||||| Sbjct: 907 atgggcg 913 Score = 54.0 bits (27), Expect = 2e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctgg 46 ||||||| |||||||||||| ||||||| ||||| || |||||||| Sbjct: 1075 acaaggaaggcattcccccagaccagcagaggctgatctttgctgg 1120 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||||| ||||| || |||||||| |||||| ||||||||||||| Sbjct: 640 accagcagaggctgatctttgctggcaagcagctggaagatgggcg 685 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||||| ||||| || |||||||| |||||| ||||||||||||| Sbjct: 412 accagcagaggctgatctttgctggcaagcagctggaagatgggcg 457
>gb|DQ216240.1| Taeniopygia guttata clone 0061P0001C12 ubiquitin C variant 2-like mRNA, complete sequence Length = 1530 Score = 87.7 bits (44), Expect = 1e-14 Identities = 85/99 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 163 acaaggagggcattcccccagaccagcagaggctgatctttgctggtaagcagctggaag 222 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | |||| |||||||| |||||||||| Sbjct: 223 atggccgcaccctctctgactacaacatccagaaagagt 261 Score = 71.9 bits (36), Expect = 8e-10 Identities = 59/67 (88%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| ||||||| ||||| || |||||||| |||||| |||| | Sbjct: 1076 acaaggaaggcattcccccagaccagcagaggctgatctttgctggcaagcagctggagg 1135 Query: 61 atgggcg 67 ||||||| Sbjct: 1136 atgggcg 1142 Score = 63.9 bits (32), Expect = 2e-07 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||| || || ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 848 acaaggagggcatccctcctgaccagcagaggctgatctttgctggcaagcagctggaag 907 Query: 61 atgggcg 67 ||||||| Sbjct: 908 atgggcg 914 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||||| ||||| || |||||||| |||||| ||||||||||||| Sbjct: 640 accagcagaggctgatctttgctggcaagcagctggaagatgggcg 685 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||||| ||||| || |||||||| |||||| ||||||||||||| Sbjct: 412 accagcagaggctgatctttgctggcaagcagctggaagatgggcg 457
>gb|DQ216239.1| Taeniopygia guttata clone 0058P0040D01 ubiquitin C variant 2-like mRNA, complete sequence Length = 1376 Score = 87.7 bits (44), Expect = 1e-14 Identities = 85/99 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 163 acaaggagggcattcccccagaccagcagaggctgatctttgctggtaagcagctggaag 222 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | |||| |||||||| |||||||||| Sbjct: 223 atggccgcaccctctctgactacaacatccagaaagagt 261 Score = 63.9 bits (32), Expect = 2e-07 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||| || || ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 847 acaaggagggcatccctcctgaccagcagaggctgatctttgctggcaagcagctggaag 906 Query: 61 atgggcg 67 ||||||| Sbjct: 907 atgggcg 913 Score = 54.0 bits (27), Expect = 2e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctgg 46 ||||||| |||||||||||| ||||||| ||||| || |||||||| Sbjct: 1075 acaaggaaggcattcccccagaccagcagaggctgatctttgctgg 1120 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||||| ||||| || |||||||| |||||| ||||||||||||| Sbjct: 640 accagcagaggctgatctttgctggcaagcagctggaagatgggcg 685 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||||| ||||| || |||||||| |||||| ||||||||||||| Sbjct: 412 accagcagaggctgatctttgctggcaagcagctggaagatgggcg 457
>gb|DQ216237.1| Taeniopygia guttata clone 0058P0020B09 ubiquitin C variant 1-like mRNA, complete sequence Length = 1346 Score = 87.7 bits (44), Expect = 1e-14 Identities = 61/67 (91%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 163 acaaggagggcattcccccagaccagcagaggctgatctttgctggcaagcagctggaag 222 Query: 61 atgggcg 67 ||||||| Sbjct: 223 atgggcg 229 Score = 79.8 bits (40), Expect = 3e-12 Identities = 84/99 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| ||||||| ||||| ||||| ||||| |||||| |||||| Sbjct: 847 acaaggaaggcattcccccagaccagcagaggctgattttcgctggcaagcagctggaag 906 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | | ||||||||||| ||||| |||| Sbjct: 907 atgggcgcaccctgtccgattacaacatccagaaggagt 945 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||||| ||||| || |||||||| |||||| ||||||||||||| Sbjct: 412 accagcagaggctgatctttgctggcaagcagctggaagatgggcg 457
>gb|DQ216234.1| Taeniopygia guttata clone 0058P0013A07 ubiquitin C variant 1-like mRNA, complete sequence Length = 1347 Score = 87.7 bits (44), Expect = 1e-14 Identities = 61/67 (91%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 163 acaaggagggcattcccccagaccagcagaggctgatctttgctggcaagcagctggaag 222 Query: 61 atgggcg 67 ||||||| Sbjct: 223 atgggcg 229 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||| ||||| ||||||| ||| | ||||| ||||| |||||| |||||| Sbjct: 847 acaaggaaggcatttccccagaccagcagaggttgattttcgctggcaagcagctggaag 906 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | | ||||||||||| ||||| |||| Sbjct: 907 atgggcgcaccctgtccgattacaacatccagaaggagt 945 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||||| ||||| || |||||||| |||||| ||||||||||||| Sbjct: 412 accagcagaggctgatctttgctggcaagcagctggaagatgggcg 457
>gb|DQ216233.1| Taeniopygia guttata clone 0063P0008C04 ubiquitin C variant 1-like mRNA, complete sequence Length = 1305 Score = 87.7 bits (44), Expect = 1e-14 Identities = 61/67 (91%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 163 acaaggagggcattcccccagaccagcagaggctgatctttgctggcaagcagctggaag 222 Query: 61 atgggcg 67 ||||||| Sbjct: 223 atgggcg 229 Score = 79.8 bits (40), Expect = 3e-12 Identities = 60/67 (89%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| ||||||| ||||| ||||| ||||| |||||| |||||| Sbjct: 847 acaaggaaggcattcccccagaccagcagaggctgattttcgctggcaagcagctggaag 906 Query: 61 atgggcg 67 ||||||| Sbjct: 907 atgggcg 913 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||||| ||||| || |||||||| |||||| ||||||||||||| Sbjct: 412 accagcagaggctgatctttgctggcaagcagctggaagatgggcg 457
>gb|DQ216232.1| Taeniopygia guttata clone 0058P0060G06 ubiquitin C variant 1-like mRNA, complete sequence Length = 1306 Score = 87.7 bits (44), Expect = 1e-14 Identities = 61/67 (91%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 163 acaaggagggcattcccccagaccagcagaggctgatctttgctggcaagcagctggaag 222 Query: 61 atgggcg 67 ||||||| Sbjct: 223 atgggcg 229 Score = 79.8 bits (40), Expect = 3e-12 Identities = 60/67 (89%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| ||||||| ||||| ||||| ||||| |||||| |||||| Sbjct: 848 acaaggaaggcattcccccagaccagcagaggctgattttcgctggcaagcagctggaag 907 Query: 61 atgggcg 67 ||||||| Sbjct: 908 atgggcg 914 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||||| ||||| || |||||||| |||||| ||||||||||||| Sbjct: 412 accagcagaggctgatctttgctggcaagcagctggaagatgggcg 457
>gb|AC149642.2| Medicago truncatula chromosome 2 BAC clone mth2-62p11, complete sequence Length = 95165 Score = 87.7 bits (44), Expect = 1e-14 Identities = 85/99 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| ||||| ||||||||| | ||||| ||||| |||||||||||||||||| | |||| Sbjct: 65102 acaaagagggtattcccccagatcagcagaggctcatttttgctggaaagcagcttgaag 65161 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| |||| | |||||||||||||| |||||||||| Sbjct: 65162 atggcagaactcttgctgattacaacatccagaaagagt 65200 Score = 81.8 bits (41), Expect = 8e-13 Identities = 58/64 (90%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||| ||| ||||||||||| | |||||||||||||||||| | |||| Sbjct: 65558 acaaggagggcattcctccagaccagcaaaggttgatttttgctggaaagcagcttgaag 65617 Query: 61 atgg 64 |||| Sbjct: 65618 atgg 65621 Score = 79.8 bits (40), Expect = 3e-12 Identities = 84/99 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| ||||||||| ||||||||||| | ||||||||||||||||| | |||| Sbjct: 65330 acaaggagggtattcccccagaccagcaaaggttgatttttgctggaaagcaacttgaag 65389 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 | || ||||| | |||||||| || || |||||||||| Sbjct: 65390 acggtcgaactctggctgattataatatccagaaagagt 65428 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 |||||||| || || ||| | ||||| ||| | || |||||||| |||||| | |||||| Sbjct: 65788 aaggagggaatcccaccagatcagcagaggttgatctttgctgggaagcagcttgaagat 65847 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || || |||||||| |||||||||||||||| Sbjct: 65848 ggccggactttggctgattataacattcagaaagagt 65884 Score = 58.0 bits (29), Expect = 1e-05 Identities = 73/88 (82%) Strand = Plus / Plus Query: 12 attcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgggcgaaca 71 ||||| ||| ||||||| ||||| || ||||||||||| ||| | |||||||| |||| Sbjct: 64885 attccaccagaccagcagaggctcatctttgctggaaaacagcttgaagatggcagaacc 64944 Query: 72 ttagctgattacaacattcagaaagagt 99 || ||||| |||||||| ||||| |||| Sbjct: 64945 ttggctgactacaacatccagaaggagt 64972 Score = 56.0 bits (28), Expect = 5e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 36 atttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaa 95 |||||||||||||||||| |||| |||||||| || | |||||||| ||||| ||||| Sbjct: 64681 atttttgctggaaagcagctggaggatgggcgtacccttgctgattataacatccagaag 64740 Query: 96 gagt 99 |||| Sbjct: 64741 gagt 64744 Score = 48.1 bits (24), Expect = 0.011 Identities = 80/99 (80%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| || |||||| | ||||| ||| | || |||||||| ||||| ||||| | Sbjct: 66014 acaaggagggaatccccccagatcagcagaggttgatctttgctgggaagcaattggagg 66073 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| | || | ||||| |||||||||||||| |||| Sbjct: 66074 atggaaggacccttgctgactacaacattcagaaggagt 66112
>gb|L81142.1| Pisum sativum (Alaska) ubuquitin (PUB4) gene, complete cds Length = 2750 Score = 85.7 bits (43), Expect = 5e-14 Identities = 81/94 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| |||||||||| | |||||||||||||| || |||||| Sbjct: 1897 acaaggagggcattcccccagaccagcaaagattgatttttgctggaaaacaactggaag 1956 Query: 61 atgggcgaacattagctgattacaacattcagaa 94 |||| || || || ||||||||||| || ||||| Sbjct: 1957 atggacggaccttggctgattacaatatccagaa 1990 Score = 79.8 bits (40), Expect = 3e-12 Identities = 84/99 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| ||||| ||||| ||| | ||||||||| | |||||||||||||||||| | |||| Sbjct: 1669 acaaagagggtattccaccagatcagcaaaggttgatttttgctggaaagcagctcgaag 1728 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| |||| | |||||||||||||| |||||||||| Sbjct: 1729 atggaagaaccctggctgattacaacatccagaaagagt 1767 Score = 54.0 bits (27), Expect = 2e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 36 atttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaa 94 ||||||||||| |||||| |||| |||||||| || | |||||||||||||| ||||| Sbjct: 1248 atttttgctggcaagcagctggaggatgggcgtacccttgctgattacaacatacagaa 1306
>gb|DQ011576.1| Euphorbia characias polyubiquitin mRNA, partial cds Length = 1100 Score = 85.7 bits (43), Expect = 5e-14 Identities = 81/94 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| || ||||||||| | ||||| ||| | || |||||||||||||| ||||||| Sbjct: 737 acaaggaagggattcccccagatcagcagaggttgatctttgctggaaagcaattggaag 796 Query: 61 atgggcgaacattagctgattacaacattcagaa 94 |||| || || || |||||||||||||||||||| Sbjct: 797 atggccggaccttggctgattacaacattcagaa 830 Score = 56.0 bits (28), Expect = 5e-05 Identities = 81/99 (81%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| |||||||| | ||||| ||| | || ||||| ||||||||| |||||| Sbjct: 53 acaaggagggaattcccccggatcagcagaggttgatctttgccggaaagcagctggaag 112 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || || || || || ||||||||||| |||| Sbjct: 113 atggccggactttggccgactataacattcagaaggagt 151 Score = 46.1 bits (23), Expect = 0.044 Identities = 76/94 (80%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| || |||||||| ||||||| ||||| || ||||| ||||||||| | || | Sbjct: 509 acaaggaaggaattcccccggaccagcagaggctgatctttgccggaaagcagcttgagg 568 Query: 61 atgggcgaacattagctgattacaacattcagaa 94 | || || || || || ||||||||||| ||||| Sbjct: 569 acggccgtactttggccgattacaacatacagaa 602 Score = 44.1 bits (22), Expect = 0.17 Identities = 64/78 (82%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||| | || ||||| ||||||||||||||||| || || || || || || | Sbjct: 302 accagcagaggttgatatttgccggaaagcagttggaagacggccgtactttggccgact 361 Query: 82 acaacattcagaaagagt 99 |||| |||||||| |||| Sbjct: 362 acaatattcagaaggagt 379
>gb|BT012698.1| Lycopersicon esculentum clone 113569R, mRNA sequence Length = 1626 Score = 83.8 bits (42), Expect = 2e-13 Identities = 83/97 (85%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| |||||||||||| ||||||| ||| | || ||||| |||||||||||||||||| Sbjct: 385 aaggaaggcattcccccagaccagcagaggttgatctttgcaggaaagcagttggaagat 444 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || ||||||| |||||||| ||||| |||| Sbjct: 445 ggccgcaccctagctgactacaacatccagaaggagt 481 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| || |||||||| | ||||||||||| || || ||||||||||||||||| || Sbjct: 157 aaggaaggaattcccccggatcagcaaaggcttatcttcgctggaaagcagttggaggac 216 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || |||||||||||||||| ||||| |||| Sbjct: 217 ggacgtactctagctgattacaacatccagaaggagt 253 Score = 60.0 bits (30), Expect = 3e-06 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcag 53 |||||||||| ||||||||| ||||||| ||| | ||||||||||| |||||| Sbjct: 1067 acaaggagggtattcccccagaccagcagaggttgatttttgctggcaagcag 1119
>emb|AJ841743.1| Plantago major ubi1 gene for ubiquitin Length = 231 Score = 83.8 bits (42), Expect = 2e-13 Identities = 98/118 (83%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||| | || ||||| ||||||||| | || | Sbjct: 95 acaaggagggcattcccccagaccagcagaggttgatctttgccggaaagcagcttgagg 154 Query: 61 atgggcgaacattagctgattacaacattcagaaagagtnttntntccatttggtcct 118 |||| || || | || |||||||||||||||||||||| | ||||||||||||| Sbjct: 155 atggtcgcacgcttgccgattacaacattcagaaagagtccactctccatttggtcct 212
>emb|AJ844617.1| Plantago major mRNA for polyubiquitin (ubq3 gene) Length = 1319 Score = 83.8 bits (42), Expect = 2e-13 Identities = 98/118 (83%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||| | || ||||| ||||||||| | || | Sbjct: 83 acaaggagggcattcccccagaccagcagaggttgatctttgccggaaagcagcttgagg 142 Query: 61 atgggcgaacattagctgattacaacattcagaaagagtnttntntccatttggtcct 118 |||| || || | || |||||||||||||||||||||| | ||||||||||||| Sbjct: 143 atggtcgcacgcttgccgattacaacattcagaaagagtccactctccatttggtcct 200 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| | ||||| ||| | || |||||||| || || | || | Sbjct: 539 acaaggaaggcattcccccagatcagcagaggttgatctttgctggtaaacaacttgagg 598 Query: 61 atgggcgaacattagctgattacaacattcagaa 94 ||||||| || | |||||||||||||||||||| Sbjct: 599 atgggcgtacccttgctgattacaacattcagaa 632 Score = 52.0 bits (26), Expect = 7e-04 Identities = 79/97 (81%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 |||||||| |||||||| ||||||| ||| | || ||||||||||||||| | || ||| Sbjct: 313 aaggagggtattcccccggaccagcagaggttgatctttgctggaaagcagcttgaggat 372 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||| |||||||| ||||| |||| Sbjct: 373 ggtcgtaccctcgctgactacaacatccagaaggagt 409 Score = 46.1 bits (23), Expect = 0.044 Identities = 79/98 (80%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| || || || ||| ||||||| || || || |||||||||||||| ||||| | Sbjct: 767 acaaggaaggtatcccaccagaccagcagagacttatctttgctggaaagcaattggagg 826 Query: 61 atgggcgaacattagctgattacaacattcagaaagag 98 |||| || || | ||||| ||||| || ||||||||| Sbjct: 827 atggtcgtactctggctgactacaatatccagaaagag 864
>gb|U77940.1|PVU77940 Phaseolus vulgaris polyubiquitin mRNA, partial cds Length = 790 Score = 83.8 bits (42), Expect = 2e-13 Identities = 83/97 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||| ||| | ||||| ||||| ||||||||||| || || ||||||| Sbjct: 510 acaaggagggcattccaccagatcagcagaggcttatttttgctggtaaacaattggaag 569 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 |||| || || || || || ||||||||||||||||| Sbjct: 570 atggtcgcaccttggcagactacaacattcagaaaga 606 Score = 63.9 bits (32), Expect = 2e-07 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||| || ||| ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 282 acaaggaaggcatcccaccagaccagcagaggctcatatttgctgggaagcagctggaag 341 Query: 61 atgggcg 67 ||||||| Sbjct: 342 atgggcg 348 Score = 42.1 bits (21), Expect = 0.68 Identities = 53/64 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||| || || | ||||| ||||| ||||||||||| || ||| | |||| Sbjct: 54 acaaggagggcatccctccggatcagcagaggcttatttttgctggtaaacagcttgaag 113 Query: 61 atgg 64 |||| Sbjct: 114 atgg 117
>gb|M74156.1|TOBUBI4A Nicotiana sylvestris (clone 6PU4) pentameric polyubiquitin (ubi4) mRNA, complete cds Length = 1321 Score = 83.8 bits (42), Expect = 2e-13 Identities = 83/97 (85%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 |||||||| || || ||| | ||||||||||| || |||||||| ||||||||||||||| Sbjct: 770 aaggagggtatcccaccagatcagcaaaggctgatctttgctggtaagcagttggaagat 829 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || ||||| | |||||||||||||| ||||| |||| Sbjct: 830 ggccgaacccttgctgattacaacatccagaaggagt 866 Score = 83.8 bits (42), Expect = 2e-13 Identities = 83/97 (85%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 |||||||| || || ||| ||||||||||| | ||||||||||| ||||| ||||||||| Sbjct: 542 aaggagggaatcccaccagaccagcaaaggttgatttttgctggtaagcaattggaagat 601 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || | || |||||||||||||| |||||||| |||| Sbjct: 602 ggaaggaccttagctgattacaatattcagaaggagt 638 Score = 73.8 bits (37), Expect = 2e-10 Identities = 57/64 (89%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| |||||||| | ||||| ||||| ||||||||||| ||||||||||||| Sbjct: 996 acaaggagggtattcccccggatcagcagaggctgatttttgctgggaagcagttggaag 1055 Query: 61 atgg 64 |||| Sbjct: 1056 atgg 1059 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| || || ||| ||||||||||| | ||||| || |||||||| | |||| Sbjct: 312 acaaggagggaatcccaccagaccagcaaaggttgattttcgccggaaagcaactcgaag 371 Query: 61 atgggcgaacattagctgattacaacattcagaa 94 | || |||| |||||||||||||||| ||||| Sbjct: 372 acggcagaaccctagctgattacaacatccagaa 405
>gb|DQ216251.1| Taeniopygia guttata clone 0063P0020H09 ubiquitin C variant 10-like mRNA, complete sequence Length = 716 Score = 81.8 bits (41), Expect = 8e-13 Identities = 58/64 (90%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 236 acaaggagggcattcccccagaccagcagaggctgatctttgctggcaagcagctggaag 295 Query: 61 atgg 64 |||| Sbjct: 296 atgg 299
>gb|DQ216252.1| Taeniopygia guttata clone 0058P0005E02 ubiquitin C variant 12-like mRNA, complete sequence Length = 1378 Score = 79.8 bits (40), Expect = 3e-12 Identities = 60/67 (89%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 619 acaaggaaggcattcccccagaccagcagaggctgatctttgctggtaagcagctggaag 678 Query: 61 atgggcg 67 ||||||| Sbjct: 679 atgggcg 685 Score = 79.8 bits (40), Expect = 3e-12 Identities = 60/67 (89%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| || |||||||| |||||| |||| | Sbjct: 163 acaaggagggcattcccccagaccagcagaggctgatctttgctggcaagcagctggagg 222 Query: 61 atgggcg 67 ||||||| Sbjct: 223 atgggcg 229 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||||| ||||| ||||| ||||| |||||| ||||||||||||| Sbjct: 1096 accagcagaggctgattttcgctggcaagcagctggaagatgggcg 1141 Score = 48.1 bits (24), Expect = 0.011 Identities = 56/67 (83%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| || ||||| || || |||| ||||| || |||||||| |||||| |||||| Sbjct: 391 acaaggaaggtattcctcctgacaagcagaggctgatctttgctggtaagcagctggaag 450 Query: 61 atgggcg 67 ||||||| Sbjct: 451 atgggcg 457
>gb|DQ216248.1| Taeniopygia guttata clone 0058P0029E05 ubiquitin C variant 8-like mRNA, complete sequence Length = 1378 Score = 79.8 bits (40), Expect = 3e-12 Identities = 60/67 (89%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| || |||||||| |||||| |||| | Sbjct: 163 acaaggagggcattcccccagaccagcagaggctgatctttgctggcaagcagctggagg 222 Query: 61 atgggcg 67 ||||||| Sbjct: 223 atgggcg 229 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 619 acaaggaaggcattccccccgaccagcagaggctgatctttgctggcaagcagctggaag 678 Query: 61 atgg 64 |||| Sbjct: 679 atgg 682 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||||| ||||| ||||| ||||| |||||| ||||||||||||| Sbjct: 1096 accagcagaggctgattttcgctggcaagcagctggaagatgggcg 1141 Score = 48.1 bits (24), Expect = 0.011 Identities = 56/67 (83%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| || ||||| || || |||| ||||| || |||||||| |||||| |||||| Sbjct: 391 acaaggaaggtattcctcctgacaagcagaggctgatctttgctggtaagcagctggaag 450 Query: 61 atgggcg 67 ||||||| Sbjct: 451 atgggcg 457
>gb|DQ216236.1| Taeniopygia guttata clone 0058P0054D08 ubiquitin C variant 1-like mRNA, complete sequence Length = 1150 Score = 79.8 bits (40), Expect = 3e-12 Identities = 60/67 (89%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 163 acaaggaaggcattcccccagaccagcagaggctgatctttgctggtaagcagctggaag 222 Query: 61 atgggcg 67 ||||||| Sbjct: 223 atgggcg 229 Score = 73.8 bits (37), Expect = 2e-10 Identities = 57/64 (89%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 847 acaaggagggcattcccccagatcagcagaggctgatctttgctggcaagcagctggaag 906 Query: 61 atgg 64 |||| Sbjct: 907 atgg 910
>gb|BT012977.1| Lycopersicon esculentum clone 114188F, mRNA sequence Length = 653 Score = 79.8 bits (40), Expect = 3e-12 Identities = 84/99 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| || ||||| ||| ||||||||||||| ||||||||||| |||||| | |||| Sbjct: 119 acaaggaaggaattcctccagaccagcaaaggctgatttttgctggtaagcagctagaag 178 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | ||||| || |||||||||||||||| Sbjct: 179 atggccgcactcttgctgactataacattcagaaagagt 217
>gb|DQ122773.1| Medicago sativa clone MH5 pentameric polyubiquitin mRNA, partial cds Length = 571 Score = 79.8 bits (40), Expect = 3e-12 Identities = 72/83 (86%) Strand = Plus / Plus Query: 12 attcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgggcgaaca 71 ||||||||| ||||||| ||||| || || |||||||||||||||||||| || | || Sbjct: 402 attcccccagaccagcagaggcttatcttcgctggaaagcagttggaagacggaaggacc 461 Query: 72 ttagctgattacaacattcagaa 94 |||||||||||||||||||||| Sbjct: 462 ctagctgattacaacattcagaa 484
>emb|AJ844616.1| Plantago major mRNA for polyubiquitin (ubq2 gene) Length = 950 Score = 79.8 bits (40), Expect = 3e-12 Identities = 84/99 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| |||||||| ||||||| ||| | ||||| ||||| |||||| |||||| Sbjct: 399 acaaggagggtattcccccggaccagcagaggttgattttcgctggtaagcagctggaag 458 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || || || ||||| |||||||||||||||| Sbjct: 459 atggccgtaccttggcagattataacattcagaaagagt 497 Score = 56.0 bits (28), Expect = 5e-05 Identities = 99/124 (79%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| || |||||||| ||||||| ||| | || ||||| ||||||||| | || | Sbjct: 171 acaaggaaggtattcccccggaccagcagaggttgatctttgccggaaagcagctcgagg 230 Query: 61 atgggcgaacattagctgattacaacattcagaaagagtnttntntccatttggtcctga 120 |||| || || || || ||||||||||| ||||| |||| | | | ||||||||||| | Sbjct: 231 atggccgtaccttggcagattacaacatccagaaggagtctactctgcatttggtcctca 290 Query: 121 ggct 124 |||| Sbjct: 291 ggct 294 Score = 54.0 bits (27), Expect = 2e-04 Identities = 44/50 (88%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagca 52 ||||||||||| || || ||||||||||||| ||||||||||| ||||| Sbjct: 629 aaggagggcatcccacctgaccagcaaaggctcatttttgctgggaagca 678
>gb|DQ445914.1| Gladiolus grandiflorus polyubiquitin (UBQ) gene, promoter region and partial cds Length = 2392 Score = 77.8 bits (39), Expect = 1e-11 Identities = 56/62 (90%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 |||||||| ||||||||| ||||||||||||| || |||||||| ||||||||||| ||| Sbjct: 2232 aaggagggtattcccccagaccagcaaaggcttatatttgctggcaagcagttggaggat 2291 Query: 63 gg 64 || Sbjct: 2292 gg 2293 Score = 60.0 bits (30), Expect = 3e-06 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcag 53 |||||||||| ||||| || ||||||| |||||||| ||||||||||||||| Sbjct: 2002 acaaggaggggattcctccggaccagcagaggctaatctttgctggaaagcag 2054
>emb|X67957.1|AMUBIQMRP A.majus mRNA for ubiquitin (partial) Length = 1094 Score = 77.8 bits (39), Expect = 1e-11 Identities = 80/94 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| || || ||||||||||| | || | Sbjct: 70 acaaggagggcattcccccagaccagcagaggctcatcttcgctggaaagcaactcgagg 129 Query: 61 atgggcgaacattagctgattacaacattcagaa 94 |||| || || || ||||| |||||||||||||| Sbjct: 130 atggccgtactttggctgactacaacattcagaa 163 Score = 56.0 bits (28), Expect = 5e-05 Identities = 81/99 (81%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| || || ||| ||||||| ||||| || || ||||| |||||| | || | Sbjct: 526 acaaggaggggatcccaccagaccagcagaggctcatcttcgctggtaagcagcttgagg 585 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || || || || ||||||||||||||||||| Sbjct: 586 atggtcgcaccttggccgactacaacattcagaaagagt 624 Score = 48.1 bits (24), Expect = 0.011 Identities = 80/99 (80%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| || || ||| | ||||| ||||| || || |||||||||||| | || | Sbjct: 298 acaaggagggaatcccaccagatcagcagaggcttatcttcgctggaaagcagcttgagg 357 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || || ||||| |||||||| ||||| |||| Sbjct: 358 atggccgcactttggctgactacaacatccagaaggagt 396
>gb|AF429430.1|AF429430 Olea europaea polyubiquitin OUB2 mRNA, complete cds Length = 1666 Score = 77.8 bits (39), Expect = 1e-11 Identities = 80/94 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||||||||| ||||||||||| | ||||||||||| |||||| | || | Sbjct: 404 acaaggagggcattcccccggaccagcaaaggttgatttttgctggcaagcagctcgagg 463 Query: 61 atgggcgaacattagctgattacaacattcagaa 94 |||| || || | |||||||||||||| ||||| Sbjct: 464 atggacgcactctcgctgattacaacatccagaa 497 Score = 46.1 bits (23), Expect = 0.044 Identities = 38/43 (88%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgg 64 ||||||||||| | || ||||||||||||||| |||| ||||| Sbjct: 1337 accagcaaaggttgatctttgctggaaagcagctggaggatgg 1379
>gb|AF088848.1|AF088848 Capsicum chinense polyubiquitin (Ubi) mRNA, partial cds Length = 1066 Score = 77.8 bits (39), Expect = 1e-11 Identities = 80/94 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| || ||| | ||||||||| | ||||||||||| ||||||||||||| Sbjct: 431 acaaagagggcatcccaccagatcagcaaaggttgatttttgctggtaagcagttggaag 490 Query: 61 atgggcgaacattagctgattacaacattcagaa 94 |||| || ||| | || |||||||| |||||||| Sbjct: 491 atggacgcacactggccgattacaatattcagaa 524 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| || ||||| || |||||| | |||| Sbjct: 659 acaaggagggcattcccccagaccagcagaggctgatctttgcagggaagcagctcgaag 718 Query: 61 atgg 64 |||| Sbjct: 719 atgg 722 Score = 40.1 bits (20), Expect = 2.7 Identities = 79/99 (79%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| || || |||||| |||||||||| | || || |||||||||||| | || | Sbjct: 203 acaaggaaggaatccccccagaccagcaaagattgatcttcgctggaaagcagcttgagg 262 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 | || || || | |||||||||||||| ||||| |||| Sbjct: 263 acggccgcacccttgctgattacaacatccagaaggagt 301
>gb|DQ216253.1| Taeniopygia guttata clone 0058P0031B03 ubiquitin C variant 14-like mRNA, complete sequence Length = 1327 Score = 75.8 bits (38), Expect = 5e-11 Identities = 58/65 (89%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| |||||||||||| ||||||| ||||| ||||| ||||| |||||| |||||||| Sbjct: 849 aaggaaggcattcccccagaccagcagaggctgattttcgctggcaagcagctggaagat 908 Query: 63 gggcg 67 ||||| Sbjct: 909 gggcg 913 Score = 73.8 bits (37), Expect = 2e-10 Identities = 57/64 (89%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| || ||||| || |||||| |||||| Sbjct: 163 acaaggagggcattcccccagaccagcagaggctgatctttgccggtaagcagctggaag 222 Query: 61 atgg 64 |||| Sbjct: 223 atgg 226 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||| || || ||||||| ||||| || |||||||| |||||| |||| | Sbjct: 391 acaaggagggcatccctcctgaccagcagaggctgatctttgctggtaagcagctggagg 450 Query: 61 atgggcg 67 ||||||| Sbjct: 451 atgggcg 457 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||||| ||||| || |||||||| |||||| ||||||||||||| Sbjct: 640 accagcagaggctgatctttgctggcaagcagctggaagatgggcg 685
>gb|DQ216250.1| Taeniopygia guttata clone 0058P0027F01 ubiquitin C variant 9-like mRNA, complete sequence Length = 1074 Score = 75.8 bits (38), Expect = 5e-11 Identities = 58/65 (89%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| |||||||||||| ||||||| ||||| ||||| ||||| |||||| |||||||| Sbjct: 621 aaggaaggcattcccccagaccagcagaggctgattttcgctggcaagcagctggaagat 680 Query: 63 gggcg 67 ||||| Sbjct: 681 gggcg 685 Score = 73.8 bits (37), Expect = 2e-10 Identities = 57/64 (89%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| || ||||| || |||||| |||||| Sbjct: 163 acaaggagggcattcccccagaccagcagaggctgatctttgccggtaagcagctggaag 222 Query: 61 atgg 64 |||| Sbjct: 223 atgg 226 Score = 63.9 bits (32), Expect = 2e-07 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||| || || ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 391 acaaggagggcatccctcctgaccagcagaggctgatctttgctggtaagcagctggaag 450 Query: 61 atgggcg 67 ||||||| Sbjct: 451 atgggcg 457
>gb|DQ216249.1| Taeniopygia guttata clone 0058P0031D03 ubiquitin C variant 9-like mRNA, complete sequence Length = 1327 Score = 75.8 bits (38), Expect = 5e-11 Identities = 58/65 (89%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| |||||||||||| ||||||| ||||| ||||| ||||| |||||| |||||||| Sbjct: 849 aaggaaggcattcccccagaccagcagaggctgattttcgctggcaagcagctggaagat 908 Query: 63 gggcg 67 ||||| Sbjct: 909 gggcg 913 Score = 73.8 bits (37), Expect = 2e-10 Identities = 57/64 (89%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| || ||||| || |||||| |||||| Sbjct: 163 acaaggagggcattcccccagaccagcagaggctgatctttgccggtaagcagctggaag 222 Query: 61 atgg 64 |||| Sbjct: 223 atgg 226 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||| || || ||||||| ||||| || |||||||| |||||| |||| | Sbjct: 391 acaaggagggcatccctcctgaccagcagaggctgatctttgctggtaagcagctggagg 450 Query: 61 atgggcg 67 ||||||| Sbjct: 451 atgggcg 457 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||||| ||||| || |||||||| |||||| ||||||||||||| Sbjct: 640 accagcagaggctgatctttgctggcaagcagctggaagatgggcg 685
>gb|DQ216246.1| Taeniopygia guttata clone 0058P0016A01 ubiquitin C variant 7-like mRNA, complete sequence Length = 1377 Score = 75.8 bits (38), Expect = 5e-11 Identities = 58/65 (89%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| |||||||||||| ||||||| ||||| ||||| ||||| |||||| |||||||| Sbjct: 1077 aaggaaggcattcccccagaccagcagaggctgattttcgctggcaagcagctggaagat 1136 Query: 63 gggcg 67 ||||| Sbjct: 1137 gggcg 1141 Score = 73.8 bits (37), Expect = 2e-10 Identities = 57/64 (89%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| || ||||| || |||||| |||||| Sbjct: 163 acaaggagggcattcccccagaccagcagaggctgatctttgccggtaagcagctggaag 222 Query: 61 atgg 64 |||| Sbjct: 223 atgg 226 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||| || || ||||||| ||||| || |||||||| |||||| |||| | Sbjct: 391 acaaggagggcatccctcctgaccagcagaggctgatctttgctggtaagcagctggagg 450 Query: 61 atgggcg 67 ||||||| Sbjct: 451 atgggcg 457 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||||| ||||| || |||||||| |||||| ||||||||||||| Sbjct: 640 accagcagaggctgatctttgctggcaagcagctggaagatgggcg 685 Score = 48.1 bits (24), Expect = 0.011 Identities = 63/76 (82%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || || ||||| |||||| ||||||||||||| || | |||| | Sbjct: 868 accagcagaggctgatcttcgctggcaagcagctggaagatgggcgcaccctctctgact 927 Query: 82 acaacattcagaaaga 97 ||||||| |||||||| Sbjct: 928 acaacatccagaaaga 943
>gb|BC114001.1| Bos taurus polyubiquitin, mRNA (cDNA clone MGC:133799 IMAGE:8064312), complete cds Length = 1093 Score = 75.8 bits (38), Expect = 5e-11 Identities = 82/97 (84%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||||||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 344 aaggagggcattccccccgaccagcagaggctcatctttgccggcaagcagctggaagat 403 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 404 ggccgcactctttctgattacaacatccagaaagagt 440 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 800 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 859 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 860 ggccgcactctttctgattacaacatccagaaagagt 896 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 572 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 631 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 632 ggccgcactctttctgattacaacatccagaaagagt 668 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 116 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 175 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 176 ggccgcactctttctgattacaacatccagaaagagt 212
>ref|NM_001009202.1| Ovis aries polyubiquitin (LOC443016), mRNA Length = 1102 Score = 75.8 bits (38), Expect = 5e-11 Identities = 82/97 (84%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 876 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 935 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | |||||||||||||||||||||||| Sbjct: 936 ggccgcactctttctgattacaacattcagaaagagt 972 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 648 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 707 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| ||||| |||| Sbjct: 708 ggccgcactctttctgattacaacatccagaaggagt 744 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 420 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 479 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| ||||| |||| Sbjct: 480 ggccgcactctttctgattacaacatccagaaggagt 516 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 192 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 251 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| ||||| |||| Sbjct: 252 ggccgcactctttctgattacaacatccagaaggagt 288
>gb|AF038129.1|AF038129 Ovis aries polyubiquitin mRNA, complete cds Length = 1102 Score = 75.8 bits (38), Expect = 5e-11 Identities = 82/97 (84%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 876 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 935 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | |||||||||||||||||||||||| Sbjct: 936 ggccgcactctttctgattacaacattcagaaagagt 972 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 648 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 707 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| ||||| |||| Sbjct: 708 ggccgcactctttctgattacaacatccagaaggagt 744 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 420 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 479 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| ||||| |||| Sbjct: 480 ggccgcactctttctgattacaacatccagaaggagt 516 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 192 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 251 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| ||||| |||| Sbjct: 252 ggccgcactctttctgattacaacatccagaaggagt 288
>dbj|AB099083.1| Bos taurus mRNA for similar to polyubiquitin, partial cds, clone: ORCS13778 Length = 567 Score = 75.8 bits (38), Expect = 5e-11 Identities = 82/97 (84%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||||||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 403 aaggagggcattccccccgaccagcagaggctcatctttgccggcaagcagctggaagat 462 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 463 ggccgcactctttctgattacaacatccagaaagagt 499 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 175 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 234 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 235 ggccgcactctttctgattacaacatccagaaagagt 271
>gb|DQ216247.1| Taeniopygia guttata clone 0058P0020E12 ubiquitin C variant 7-like mRNA, complete sequence Length = 1383 Score = 73.8 bits (37), Expect = 2e-10 Identities = 57/64 (89%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||||||| ||||||| ||||| || ||||| || |||||| |||||| Sbjct: 163 acaaggagggcattcccccagaccagcagaggctgatctttgccggtaagcagctggaag 222 Query: 61 atgg 64 |||| Sbjct: 223 atgg 226 Score = 67.9 bits (34), Expect = 1e-08 Identities = 57/65 (87%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| |||||||||||| ||||||| ||||| ||||| || || |||||| |||||||| Sbjct: 1077 aaggaaggcattcccccagaccagcagaggctgattttcgccggcaagcagctggaagat 1136 Query: 63 gggcg 67 ||||| Sbjct: 1137 gggcg 1141 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||| || || ||||||| ||||| || |||||||| |||||| |||| | Sbjct: 391 acaaggagggcatccctcctgaccagcagaggctgatctttgctggtaagcagctggagg 450 Query: 61 atgggcg 67 ||||||| Sbjct: 451 atgggcg 457 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||||| ||||| || |||||||| |||||| ||||||||||||| Sbjct: 640 accagcagaggctgatctttgctggcaagcagctggaagatgggcg 685 Score = 48.1 bits (24), Expect = 0.011 Identities = 63/76 (82%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || || ||||| |||||| ||||||||||||| || | |||| | Sbjct: 868 accagcagaggctgatcttcgctggcaagcagctggaagatgggcgcaccctctctgact 927 Query: 82 acaacattcagaaaga 97 ||||||| |||||||| Sbjct: 928 acaacatccagaaaga 943
>emb|X73156.1|LEPUR L.esculentum polyubiquitin repeats Length = 3885 Score = 73.8 bits (37), Expect = 2e-10 Identities = 75/88 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| || ||||||||| ||||||| ||||| || |||||||| || ||| | |||| Sbjct: 2098 acaaggaaggtattcccccagaccagcagaggctgatctttgctgggaaacagcttgaag 2157 Query: 61 atgggcgaacattagctgattacaacat 88 |||| |||||| | |||||||||||||| Sbjct: 2158 atggccgaacacttgctgattacaacat 2185 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| ||| | ||||| || || || |||||||| || ||| | |||| Sbjct: 1870 acaaggaaggcattcctccagatcagcagagactgatctttgctgggaaacagcttgaag 1929 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| |||||| | |||||||||||||| || ||||||| Sbjct: 1930 atggccgaacacttgctgattacaacatccaaaaagagt 1968 Score = 52.0 bits (26), Expect = 7e-04 Identities = 79/97 (81%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| ||||| ||| ||||||| || | || |||||||||||||| | || | Sbjct: 2554 acaaggagggtattcctccagaccagcagagattgatctttgctggaaagcaacttgagg 2613 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 |||| | || || || |||||||||||||||||||| Sbjct: 2614 atggaaggacgttggcagattacaacattcagaaaga 2650
>gb|AC170154.2| Phakopsora pachyrhizi clone JGIAFNA-1965K4, complete sequence Length = 38852 Score = 71.9 bits (36), Expect = 8e-10 Identities = 57/64 (89%) Strand = Plus / Minus Query: 34 taatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcaga 93 |||||||||| |||||||| || |||||||| || ||||| |||||||||||||| |||| Sbjct: 23001 taatttttgcaggaaagcaattagaagatggtcgcacattggctgattacaacatccaga 22942 Query: 94 aaga 97 |||| Sbjct: 22941 aaga 22938 Score = 42.1 bits (21), Expect = 0.68 Identities = 24/25 (96%) Strand = Plus / Minus Query: 75 gctgattacaacattcagaaagagt 99 ||||||||||||||||| ||||||| Sbjct: 22673 gctgattacaacattcaaaaagagt 22649 Score = 40.1 bits (20), Expect = 2.7 Identities = 53/64 (82%) Strand = Plus / Minus Query: 36 atttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaa 95 ||||||||||||||||| | ||||| ||||| || || ||||| ||||| || ||||| Sbjct: 24152 atttttgctggaaagcaacttgaagacgggcgcactttggctgactacaatatccagaag 24093 Query: 96 gagt 99 |||| Sbjct: 24092 gagt 24089 Score = 40.1 bits (20), Expect = 2.7 Identities = 53/64 (82%) Strand = Plus / Minus Query: 36 atttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaa 95 ||||||||||||||||| | ||||| ||||| || || ||||| ||||| || ||||| Sbjct: 23866 atttttgctggaaagcaacttgaagacgggcgcactttggctgactacaatatccagaag 23807 Query: 96 gagt 99 |||| Sbjct: 23806 gagt 23803 Score = 40.1 bits (20), Expect = 2.7 Identities = 53/64 (82%) Strand = Plus / Minus Query: 36 atttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaa 95 ||||||||||||||||| | ||||| || || || || ||||| |||||||| ||||| Sbjct: 23286 atttttgctggaaagcaacttgaagacggacgcactttggctgactacaacatccagaag 23227 Query: 96 gagt 99 |||| Sbjct: 23226 gagt 23223
>gb|AY389656.1| Hyacinthus orientalis ubiquitin fusion protein UBC mRNA, partial cds Length = 537 Score = 71.9 bits (36), Expect = 8e-10 Identities = 66/76 (86%) Strand = Plus / Plus Query: 24 cagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattac 83 ||||| ||||| || ||||| ||||||||| |||| ||||||||||| ||||||||||| Sbjct: 89 cagcagaggctcatctttgccggaaagcagctggaggatgggcgaaccctagctgattac 148 Query: 84 aacattcagaaagagt 99 ||||| ||||| |||| Sbjct: 149 aacatccagaacgagt 164
>ref|XM_415105.1| PREDICTED: Gallus gallus ubiquitin (LOC396190), mRNA Length = 1349 Score = 71.9 bits (36), Expect = 8e-10 Identities = 59/67 (88%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 833 acaaggagggcattccccccgatcagcagaggctgatctttgctggcaagcagctggaag 892 Query: 61 atgggcg 67 ||||||| Sbjct: 893 atgggcg 899 Score = 58.0 bits (29), Expect = 1e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||||||||| | || || ||||| || |||||||| |||||| |||||| Sbjct: 1061 acaaggagggcattccccccgatcaacagaggctgatctttgctggcaagcagctggaag 1120 Query: 61 atgg 64 |||| Sbjct: 1121 atgg 1124 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||||||||| | ||||| ||||| || || ||||| |||||| |||||| Sbjct: 605 acaaggagggcattccccccgatcagcagaggctgatcttcgctggcaagcagctggaag 664 Query: 61 atgggcg 67 | ||||| Sbjct: 665 acgggcg 671
>gb|AY496112.1| Capsicum annuum hexameric polyubiquitin 6PU11 (ubi11) mRNA, complete cds Length = 705 Score = 71.9 bits (36), Expect = 8e-10 Identities = 80/95 (84%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 |||||||| || || ||| ||||||| ||||| ||||||||||| |||||| |||| ||| Sbjct: 398 aaggagggtatcccgccagaccagcagaggctgatttttgctggtaagcagctggaggat 457 Query: 63 gggcgaacattagctgattacaacattcagaaaga 97 || || || | |||||||| |||||||||||||| Sbjct: 458 ggtcgcacccttgctgattataacattcagaaaga 492 Score = 48.1 bits (24), Expect = 0.011 Identities = 54/64 (84%) Strand = Plus / Plus Query: 36 atttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaa 95 ||||||||||| |||||| | || |||||| | || | |||||||||||||| |||||| Sbjct: 203 atttttgctggcaagcagcttgaggatgggaggactcttgctgattacaacatccagaaa 262 Query: 96 gagt 99 |||| Sbjct: 263 gagt 266
>emb|X77456.1|NTUBIU4 N.tabacum Ubi.U4 gene Length = 2785 Score = 71.9 bits (36), Expect = 8e-10 Identities = 66/76 (86%) Strand = Plus / Plus Query: 24 cagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattac 83 ||||| ||||| || ||||| |||||||| ||||||||||| ||||| | ||||||||| Sbjct: 2388 cagcagaggctgatctttgcgggaaagcaattggaagatggacgaaccctcgctgattac 2447 Query: 84 aacattcagaaagagt 99 ||||||||||| |||| Sbjct: 2448 aacattcagaaggagt 2463 Score = 71.9 bits (36), Expect = 8e-10 Identities = 51/56 (91%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaa 94 |||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||| Sbjct: 1948 tttgctggtaagcagttggaagatggccgaaccctagctgattacaacatccagaa 2003 Score = 58.0 bits (29), Expect = 1e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagag 98 |||||||| || |||||||||||||| ||||| | |||||||||||||| ||||| ||| Sbjct: 2176 tttgctggtaaacagttggaagatggccgaaccctcgctgattacaacatccagaaggag 2235 Query: 99 t 99 | Sbjct: 2236 t 2236 Score = 52.0 bits (26), Expect = 7e-04 Identities = 65/78 (83%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||||||||| || ||||| |||||||| | ||||| || ||||| | ||||||| Sbjct: 1703 accagcaaaggctgatctttgccggaaagcaacttgaagacggccgaaccctcgctgatt 1762 Query: 82 acaacattcagaaagagt 99 ||||||| ||||| |||| Sbjct: 1763 acaacatccagaaggagt 1780
>gb|AY273901.1| Gossypium barbadense putative polyubiquitin mRNA, partial cds Length = 599 Score = 71.9 bits (36), Expect = 8e-10 Identities = 83/99 (83%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| ||||| ||| ||||||| ||| | || |||||||| ||| ||||||| | Sbjct: 267 acaaggaggggattccaccagaccagcagaggttgatatttgctgggaaggagttggagg 326 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| ||||| ||||||||||||| || ||||| |||| Sbjct: 327 atggtcgaactctagctgattacaatatccagaaggagt 365 Score = 40.1 bits (20), Expect = 2.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcag 53 ||||||| ||| | |||||||||||||||||| Sbjct: 60 accagcagaggttgatttttgctggaaagcag 91
>dbj|AP006335.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT03N08, TM0292, complete sequence Length = 95495 Score = 71.9 bits (36), Expect = 8e-10 Identities = 77/91 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| ||||||||| ||||||| | || ||||| ||||| ||||||||||||| Sbjct: 74165 acaaggagggtattcccccagaccagcagcgacttattttcgctggtaagcagttggaag 74224 Query: 61 atgggcgaacattagctgattacaacattca 91 |||| || ||| | || |||||||| ||||| Sbjct: 74225 atggacgtacactggcagattacaatattca 74255 Score = 71.9 bits (36), Expect = 8e-10 Identities = 83/99 (83%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||| || ||| ||||||| ||||| || ||||||||||| ||| | |||| Sbjct: 73937 acaaggagggcatcccgccagaccagcagaggctcatctttgctggaaaacagcttgaag 73996 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| |||| | |||||||| ||||||||||| |||| Sbjct: 73997 atggaagaacccttgctgattataacattcagaaggagt 74035 Score = 48.1 bits (24), Expect = 0.011 Identities = 63/76 (82%) Strand = Plus / Plus Query: 24 cagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgattac 83 ||||||||||| || |||||||| |||||||| || ||||| || || | ||||| ||| Sbjct: 73504 cagcaaaggcttatctttgctggcaagcagttagaggatggtcgcacccttgctgactac 73563 Query: 84 aacattcagaaagagt 99 ||||| ||||| |||| Sbjct: 73564 aacatccagaaggagt 73579 Score = 44.1 bits (22), Expect = 0.17 Identities = 64/78 (82%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| ||||||||||| || || | || |||||| | || || ||||||| Sbjct: 73730 accagcagaggcttatttttgctgggaaacaacttgaggatgggaggaccttggctgatt 73789 Query: 82 acaacattcagaaagagt 99 ||||||| ||||| |||| Sbjct: 73790 acaacatccagaaggagt 73807
>gb|AY228477.1| Anas platyrhynchos polyubiquitin gene, partial cds Length = 345 Score = 71.9 bits (36), Expect = 8e-10 Identities = 83/99 (83%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||||||||| ||||||| ||| | || |||||||| |||||| |||||| Sbjct: 203 acaaagagggcattccccctgaccagcagaggttgatctttgctggcaagcagctggaag 262 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 263 atgggcgcaccctgtctgactacaacatccagaaagagt 301
>emb|X58195.1|GGPOUBII G.gallus DNA for polyubiquitin gene Ub II Length = 1483 Score = 71.9 bits (36), Expect = 8e-10 Identities = 59/67 (88%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 774 acaaggagggcattccccccgatcagcagaggctgatctttgctggcaagcagctggaag 833 Query: 61 atgggcg 67 ||||||| Sbjct: 834 atgggcg 840 Score = 58.0 bits (29), Expect = 1e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||||||||| | || || ||||| || |||||||| |||||| |||||| Sbjct: 1002 acaaggagggcattccccccgatcaacagaggctgatctttgctggcaagcagctggaag 1061 Query: 61 atgg 64 |||| Sbjct: 1062 atgg 1065 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||||||||| | ||||| ||||| || || ||||| |||||| |||||| Sbjct: 546 acaaggagggcattccccccgatcagcagaggctgatcttcgctggcaagcagctggaag 605 Query: 61 atgggcg 67 | ||||| Sbjct: 606 acgggcg 612
>dbj|AB089614.1| Pan troglodytes UbC gene for polyubiquitin C, complete cds Length = 2286 Score = 71.9 bits (36), Expect = 8e-10 Identities = 83/99 (83%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||||||||||||| |||||| Sbjct: 323 acaaggaaggcattcctcctgaccagcagaggttgatctttgctggaaagcagctggaag 382 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 383 atgggcgcaccctgtctgactacaacatccagaaagagt 421 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 1919 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 1978 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1979 atgggcgcaccctgtctgactacaacatccagaaagagt 2017 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 1235 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 1294 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1295 atgggcgcaccctgtctgactacaacatccagaaagagt 1333 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 779 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 838 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 839 atgggcgcaccctgtctgactacaacatccagaaagagt 877 Score = 60.0 bits (30), Expect = 3e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||| | Sbjct: 116 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgact 175 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 176 acaacatccagaaagagt 193 Score = 56.0 bits (28), Expect = 5e-05 Identities = 81/99 (81%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||| || || ||||||| ||||| || ||||||||||| ||| |||||| Sbjct: 1691 acaaggaaggcatccctcctgaccagcagaggctgatctttgctggaaaacagctggaag 1750 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | |||| |||||||| |||||||||| Sbjct: 1751 atggtcgtaccctgtctgactacaacatccagaaagagt 1789 Score = 48.1 bits (24), Expect = 0.011 Identities = 80/99 (80%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||| || || ||||||| ||| | || ||||||||||| ||| |||||| Sbjct: 1463 acaaggaaggcatccctcctgaccagcagaggttgatctttgctggaaaacagctggaag 1522 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | |||| |||||||| |||||||||| Sbjct: 1523 atggtcgtaccctgtctgactacaacatccagaaagagt 1561 Score = 44.1 bits (22), Expect = 0.17 Identities = 64/78 (82%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||| | || ||||||||||| ||| |||||||||| || || | |||| | Sbjct: 572 accagcagaggttgatctttgctggaaaacagctggaagatggtcgtaccctgtctgact 631 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 632 acaacatccagaaagagt 649
>dbj|AB049409.1| Eustoma grandiflorum EgUbi mRNA for ubiquitin, partial cds Length = 300 Score = 71.9 bits (36), Expect = 8e-10 Identities = 66/76 (86%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||||||||| |||||||| |||||||||||||| ||||| || || | || || | Sbjct: 116 accagcaaaggcttatttttgccggaaagcagttggaggatggacgcactctcgccgact 175 Query: 82 acaacattcagaaaga 97 |||||||||||||||| Sbjct: 176 acaacattcagaaaga 191
>dbj|AB090878.1| Aster tripolium mRNA for polyubiquitin, complete cds Length = 819 Score = 71.9 bits (36), Expect = 8e-10 Identities = 83/99 (83%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| || || ||| ||||||| ||||| || ||||||||||||||| | |||| Sbjct: 577 acaaggaggggatcccaccagaccagcagaggctcatctttgctggaaagcagctagaag 636 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||| | || | |||||||||||||| ||||| |||| Sbjct: 637 atgggaggacccttgctgattacaacatccagaaggagt 675 Score = 50.1 bits (25), Expect = 0.003 Identities = 72/88 (81%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||| |||||| ||||||| ||| | || |||||||| |||||| |||| | Sbjct: 121 acaaggaaggcatccccccagaccagcagaggttgatatttgctggcaagcagctggagg 180 Query: 61 atgggcgaacattagctgattacaacat 88 | || || || || || ||||||||||| Sbjct: 181 acggtcgtacgttggccgattacaacat 208
>gb|AC170150.2| Phakopsora pachyrhizi clone JGIAFNA-1237E23, complete sequence Length = 35279 Score = 71.9 bits (36), Expect = 8e-10 Identities = 57/64 (89%) Strand = Plus / Minus Query: 34 taatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcaga 93 |||||||||| |||||||| || |||||||| || ||||| |||||||||||||| |||| Sbjct: 15852 taatttttgcaggaaagcaattagaagatggtcgcacattggctgattacaacatccaga 15793 Query: 94 aaga 97 |||| Sbjct: 15792 aaga 15789 Score = 42.1 bits (21), Expect = 0.68 Identities = 24/25 (96%) Strand = Plus / Minus Query: 75 gctgattacaacattcagaaagagt 99 ||||||||||||||||| ||||||| Sbjct: 15524 gctgattacaacattcaaaaagagt 15500 Score = 40.1 bits (20), Expect = 2.7 Identities = 53/64 (82%) Strand = Plus / Minus Query: 36 atttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaa 95 ||||||||||||||||| | ||||| ||||| || || ||||| ||||| || ||||| Sbjct: 17003 atttttgctggaaagcaacttgaagacgggcgcactttggctgactacaatatccagaag 16944 Query: 96 gagt 99 |||| Sbjct: 16943 gagt 16940 Score = 40.1 bits (20), Expect = 2.7 Identities = 53/64 (82%) Strand = Plus / Minus Query: 36 atttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaa 95 ||||||||||||||||| | ||||| ||||| || || ||||| ||||| || ||||| Sbjct: 16717 atttttgctggaaagcaacttgaagacgggcgcactttggctgactacaatatccagaag 16658 Query: 96 gagt 99 |||| Sbjct: 16657 gagt 16654 Score = 40.1 bits (20), Expect = 2.7 Identities = 53/64 (82%) Strand = Plus / Minus Query: 36 atttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaa 95 ||||||||||||||||| | ||||| || || || || ||||| |||||||| ||||| Sbjct: 16137 atttttgctggaaagcaacttgaagacggacgcactttggctgactacaacatccagaag 16078 Query: 96 gagt 99 |||| Sbjct: 16077 gagt 16074
>gb|BC074652.1| Xenopus tropicalis ubiquitin C, mRNA (cDNA clone MGC:69388 IMAGE:5335302), complete cds Length = 2021 Score = 69.9 bits (35), Expect = 3e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaaga 97 ||||||||||||||| |||||||||| || ||| | |||||||||||||||||||||| Sbjct: 655 tttgctggaaagcagctggaagatggccgcacactctctgattacaacattcagaaaga 713 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaaga 97 ||||| ||||||||| |||||||||| || ||| | |||||||||||||||||||||| Sbjct: 1567 tttgccggaaagcagctggaagatggccgcacactctctgattacaacattcagaaaga 1625 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| ||||||| || | ||||||||||| |||||| |||||| Sbjct: 389 acaaggaaggcattccccctgaccagcagagattgatttttgctggcaagcagctggaag 448 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 |||| || || | |||| ||||||||||| ||||| Sbjct: 449 atggtcgcactctttctgactacaacattcaaaaaga 485 Score = 56.0 bits (28), Expect = 5e-05 Identities = 78/95 (82%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| || | || ||||| || |||||| |||||||| Sbjct: 1759 aaggaaggcattccccctgaccagcagagattgatctttgcaggcaagcagctggaagat 1818 Query: 63 gggcgaacattagctgattacaacattcagaaaga 97 || || || | |||||||||||||||||||||| Sbjct: 1819 ggccgcactctctctgattacaacattcagaaaga 1853 Score = 48.1 bits (24), Expect = 0.011 Identities = 77/95 (81%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||| | || ||||| || |||||| |||||||| Sbjct: 847 aaggaaggcattccccctgaccagcagaggttgatctttgcaggcaagcagctggaagat 906 Query: 63 gggcgaacattagctgattacaacattcagaaaga 97 || |||| | | |||||||| ||||||||||| Sbjct: 907 ggcagaaccctgtcagattacaatattcagaaaga 941 Score = 42.1 bits (21), Expect = 0.68 Identities = 27/29 (93%) Strand = Plus / Plus Query: 36 atttttgctggaaagcagttggaagatgg 64 ||||||||||| ||||| ||||||||||| Sbjct: 1336 atttttgctggcaagcaattggaagatgg 1364 Score = 40.1 bits (20), Expect = 2.7 Identities = 76/95 (80%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| || | || ||||| || |||||| |||||||| Sbjct: 1075 aaggaaggcattccccctgaccagcagagattgatctttgcaggcaagcagctggaagat 1134 Query: 63 gggcgaacattagctgattacaacattcagaaaga 97 || || || | |||| ||||||||||| ||||| Sbjct: 1135 ggtcgcactctttctgactacaacattcaaaaaga 1169
>emb|CT025321.2| Xenopus tropicalis finished cDNA, clone TNeu128o12 Length = 1953 Score = 69.9 bits (35), Expect = 3e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaaga 97 ||||||||||||||| |||||||||| || ||| | |||||||||||||||||||||| Sbjct: 638 tttgctggaaagcagctggaagatggccgcacactctctgattacaacattcagaaaga 696 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaaga 97 ||||| ||||||||| |||||||||| || ||| | |||||||||||||||||||||| Sbjct: 1550 tttgccggaaagcagctggaagatggccgcacactctctgattacaacattcagaaaga 1608 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| ||||||| || | ||||||||||| |||||| |||||| Sbjct: 372 acaaggaaggcattccccctgaccagcagagattgatttttgctggcaagcagctggaag 431 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 |||| || || | |||| ||||||||||| ||||| Sbjct: 432 atggtcgcactctttctgactacaacattcaaaaaga 468 Score = 56.0 bits (28), Expect = 5e-05 Identities = 78/95 (82%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| || | || ||||| || |||||| |||||||| Sbjct: 1742 aaggaaggcattccccctgaccagcagagattgatctttgcaggcaagcagctggaagat 1801 Query: 63 gggcgaacattagctgattacaacattcagaaaga 97 || || || | |||||||||||||||||||||| Sbjct: 1802 ggccgcactctctctgattacaacattcagaaaga 1836 Score = 48.1 bits (24), Expect = 0.011 Identities = 77/95 (81%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||| | || ||||| || |||||| |||||||| Sbjct: 830 aaggaaggcattccccctgaccagcagaggttgatctttgcaggcaagcagctggaagat 889 Query: 63 gggcgaacattagctgattacaacattcagaaaga 97 || |||| | | |||||||| ||||||||||| Sbjct: 890 ggcagaaccctgtcagattacaatattcagaaaga 924 Score = 42.1 bits (21), Expect = 0.68 Identities = 27/29 (93%) Strand = Plus / Plus Query: 36 atttttgctggaaagcagttggaagatgg 64 ||||||||||| ||||| ||||||||||| Sbjct: 1319 atttttgctggcaagcaattggaagatgg 1347 Score = 40.1 bits (20), Expect = 2.7 Identities = 76/95 (80%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| || | || ||||| || |||||| |||||||| Sbjct: 1058 aaggaaggcattccccctgaccagcagagattgatctttgcaggcaagcagctggaagat 1117 Query: 63 gggcgaacattagctgattacaacattcagaaaga 97 || || || | |||| ||||||||||| ||||| Sbjct: 1118 ggtcgcactctttctgactacaacattcaaaaaga 1152
>gb|BC045004.1| Xenopus laevis similar to ubiquitin C, mRNA (cDNA clone MGC:53081 IMAGE:5542131), complete cds Length = 1340 Score = 69.9 bits (35), Expect = 3e-09 Identities = 55/62 (88%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgggcga 68 |||||||| ||| ||||||| ||| | ||||||||||| |||||| |||||||||||||| Sbjct: 183 ggcattcctccagaccagcagaggttgatttttgctggcaagcagctggaagatgggcga 242 Query: 69 ac 70 || Sbjct: 243 ac 244 Score = 61.9 bits (31), Expect = 7e-07 Identities = 54/62 (87%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgggcga 68 |||||||| ||| ||||||| ||| | || |||||||| |||||| |||||||||||||| Sbjct: 1095 ggcattcctccagaccagcagaggttgatctttgctggcaagcagctggaagatgggcga 1154 Query: 69 ac 70 || Sbjct: 1155 ac 1156 Score = 61.9 bits (31), Expect = 7e-07 Identities = 54/62 (87%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgggcga 68 |||||||| ||| ||||||| ||| | || |||||||| |||||| |||||||||||||| Sbjct: 867 ggcattcctccagaccagcagaggttgatctttgctggcaagcagctggaagatgggcga 926 Query: 69 ac 70 || Sbjct: 927 ac 928 Score = 61.9 bits (31), Expect = 7e-07 Identities = 54/62 (87%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgggcga 68 |||||||| ||| ||||||| ||| | || |||||||| |||||| |||||||||||||| Sbjct: 639 ggcattcctccagaccagcagaggttgatctttgctggcaagcagctggaagatgggcga 698 Query: 69 ac 70 || Sbjct: 699 ac 700 Score = 54.0 bits (27), Expect = 2e-04 Identities = 53/62 (85%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgggcga 68 |||||||| ||| ||||||| ||| | || ||||| || |||||| |||||||||||||| Sbjct: 411 ggcattcctccagaccagcagaggttgatctttgccggcaagcagctggaagatgggcga 470 Query: 69 ac 70 || Sbjct: 471 ac 472
>gb|AF527442.1| Phaseolus vulgaris clone PvDR-9 polyubiquitin 2 mRNA, partial cds Length = 552 Score = 69.9 bits (35), Expect = 3e-09 Identities = 79/94 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||| || ||| | ||||| ||||| ||||||||||| || || ||||||| Sbjct: 268 acaaggagggcatcccaccagatcagcagaggcttatttttgctgggaaacaattggaag 327 Query: 61 atgggcgaacattagctgattacaacattcagaa 94 |||| || || || || || |||||||||||||| Sbjct: 328 atggtcgcaccttggcagactacaacattcagaa 361 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||| || ||| | || || ||||| || |||||||| ||||| ||||||| Sbjct: 40 acaaggaaggcataccaccagatcaacagaggcttatctttgctgggaagcaattggaag 99 Query: 61 atgggcgaacattagctgattacaacattcagaa 94 ||||||| || | |||||||| ||||| ||||| Sbjct: 100 atgggcgtacccttgctgattataacatccagaa 133
>ref|NM_001006687.1| Xenopus tropicalis ubiquitin C (ubc), mRNA Length = 2021 Score = 69.9 bits (35), Expect = 3e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaaga 97 ||||||||||||||| |||||||||| || ||| | |||||||||||||||||||||| Sbjct: 655 tttgctggaaagcagctggaagatggccgcacactctctgattacaacattcagaaaga 713 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaaga 97 ||||| ||||||||| |||||||||| || ||| | |||||||||||||||||||||| Sbjct: 1567 tttgccggaaagcagctggaagatggccgcacactctctgattacaacattcagaaaga 1625 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| ||||||| || | ||||||||||| |||||| |||||| Sbjct: 389 acaaggaaggcattccccctgaccagcagagattgatttttgctggcaagcagctggaag 448 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 |||| || || | |||| ||||||||||| ||||| Sbjct: 449 atggtcgcactctttctgactacaacattcaaaaaga 485 Score = 56.0 bits (28), Expect = 5e-05 Identities = 78/95 (82%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| || | || ||||| || |||||| |||||||| Sbjct: 1759 aaggaaggcattccccctgaccagcagagattgatctttgcaggcaagcagctggaagat 1818 Query: 63 gggcgaacattagctgattacaacattcagaaaga 97 || || || | |||||||||||||||||||||| Sbjct: 1819 ggccgcactctctctgattacaacattcagaaaga 1853 Score = 48.1 bits (24), Expect = 0.011 Identities = 77/95 (81%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||| | || ||||| || |||||| |||||||| Sbjct: 847 aaggaaggcattccccctgaccagcagaggttgatctttgcaggcaagcagctggaagat 906 Query: 63 gggcgaacattagctgattacaacattcagaaaga 97 || |||| | | |||||||| ||||||||||| Sbjct: 907 ggcagaaccctgtcagattacaatattcagaaaga 941 Score = 42.1 bits (21), Expect = 0.68 Identities = 27/29 (93%) Strand = Plus / Plus Query: 36 atttttgctggaaagcagttggaagatgg 64 ||||||||||| ||||| ||||||||||| Sbjct: 1336 atttttgctggcaagcaattggaagatgg 1364 Score = 40.1 bits (20), Expect = 2.7 Identities = 76/95 (80%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| || | || ||||| || |||||| |||||||| Sbjct: 1075 aaggaaggcattccccctgaccagcagagattgatctttgcaggcaagcagctggaagat 1134 Query: 63 gggcgaacattagctgattacaacattcagaaaga 97 || || || | |||| ||||||||||| ||||| Sbjct: 1135 ggtcgcactctttctgactacaacattcaaaaaga 1169
>emb|CR848533.2| Xenopus tropicalis finished cDNA, clone TEgg052p01 Length = 1929 Score = 69.9 bits (35), Expect = 3e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaaga 97 ||||||||||||||| |||||||||| || ||| | |||||||||||||||||||||| Sbjct: 600 tttgctggaaagcagctggaagatggccgcacactctctgattacaacattcagaaaga 658 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaaga 97 ||||| ||||||||| |||||||||| || ||| | |||||||||||||||||||||| Sbjct: 1512 tttgccggaaagcagctggaagatggccgcacactctctgattacaacattcagaaaga 1570 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| ||||||| || | ||||||||||| |||||| |||||| Sbjct: 334 acaaggaaggcattccccctgaccagcagagattgatttttgctggcaagcagctggaag 393 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 |||| || || | |||| ||||||||||| ||||| Sbjct: 394 atggtcgcactctttctgactacaacattcaaaaaga 430 Score = 48.1 bits (24), Expect = 0.011 Identities = 77/95 (81%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| || | || ||||| || |||||| |||||||| Sbjct: 1704 aaggaaggcattccccctgaccagcagagattgatctttgcaggcaagcagctggaagat 1763 Query: 63 gggcgaacattagctgattacaacattcagaaaga 97 || || || | ||||||| |||||||||||||| Sbjct: 1764 ggccgcactctctctgattataacattcagaaaga 1798 Score = 48.1 bits (24), Expect = 0.011 Identities = 77/95 (81%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||| | || ||||| || |||||| |||||||| Sbjct: 792 aaggaaggcattccccctgaccagcagaggttgatctttgcaggcaagcagctggaagat 851 Query: 63 gggcgaacattagctgattacaacattcagaaaga 97 || |||| | | |||||||| ||||||||||| Sbjct: 852 ggcagaaccctgtcagattacaatattcagaaaga 886 Score = 42.1 bits (21), Expect = 0.68 Identities = 27/29 (93%) Strand = Plus / Plus Query: 36 atttttgctggaaagcagttggaagatgg 64 ||||||||||| ||||| ||||||||||| Sbjct: 1281 atttttgctggcaagcaattggaagatgg 1309 Score = 40.1 bits (20), Expect = 2.7 Identities = 76/95 (80%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| || | || ||||| || |||||| |||||||| Sbjct: 1020 aaggaaggcattccccctgaccagcagagattgatctttgcaggcaagcagctggaagat 1079 Query: 63 gggcgaacattagctgattacaacattcagaaaga 97 || || || | |||| ||||||||||| ||||| Sbjct: 1080 ggtcgcactctttctgactacaacattcaaaaaga 1114
>dbj|D26092.1|SOYSUBI2 Glycine max SUBI-2 gene for ubiquitin, complete cds Length = 2075 Score = 69.9 bits (35), Expect = 3e-09 Identities = 79/94 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||| || | ||||| ||||| ||||||||||| ||||| |||||| Sbjct: 1516 acaaggagggcattccacctgatcagcagaggcttatttttgctgggaagcaactggaag 1575 Query: 61 atgggcgaacattagctgattacaacattcagaa 94 |||| || || || || |||||||| |||||||| Sbjct: 1576 atggtcgtaccttggcagattacaatattcagaa 1609 Score = 46.1 bits (23), Expect = 0.044 Identities = 76/94 (80%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| | ||||| ||||| |||||||| || || || | || | Sbjct: 1060 acaaagagggcatccccccagatcagcagaggctgatttttgccggtaaacaacttgagg 1119 Query: 61 atgggcgaacattagctgattacaacattcagaa 94 |||| |||| | |||||||||||||||||||| Sbjct: 1120 atggaagaacccttgctgattacaacattcagaa 1153
>gb|BT016494.1| Zea mays clone Contig327 mRNA sequence Length = 974 Score = 67.9 bits (34), Expect = 1e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcag 53 |||||||||||||||||||| ||||||| |||| || ||||||||||||||| Sbjct: 618 acaaggagggcattcccccagaccagcagcggctcatctttgctggaaagcag 670 Score = 44.1 bits (22), Expect = 0.17 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcag 53 ||||||||||||| || ||| ||||||| |||| || |||||||| |||||| Sbjct: 390 acaaggagggcatccctccagaccagcagcggctcatctttgctgggaagcag 442 Score = 42.1 bits (21), Expect = 0.68 Identities = 26/28 (92%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagca 28 ||||||||||||| |||||| ||||||| Sbjct: 162 acaaggagggcatccccccagaccagca 189
>gb|BT018032.1| Zea mays clone EL01N0530D02.c mRNA sequence Length = 1238 Score = 67.9 bits (34), Expect = 1e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcag 53 |||||||||||||||||||| ||||||| |||| || ||||||||||||||| Sbjct: 622 acaaggagggcattcccccagaccagcagcggctcatctttgctggaaagcag 674 Score = 44.1 bits (22), Expect = 0.17 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcag 53 ||||||||||||| || ||| ||||||| |||| || |||||||| |||||| Sbjct: 394 acaaggagggcatccctccagaccagcagcggctcatctttgctgggaagcag 446 Score = 42.1 bits (21), Expect = 0.68 Identities = 26/28 (92%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagca 28 ||||||||||||| |||||| ||||||| Sbjct: 166 acaaggagggcatccccccagaccagca 193
>gb|DQ473431.1| Anser anser breed Landoise polyubiquitin mRNA, complete cds Length = 1148 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 413 acaaggaaggcattcctcctgaccagcagaggctgatctttgctggcaagcagctggaag 472 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 ||||||| || | |||| |||||||| |||||||| Sbjct: 473 atgggcgcaccctgtctgactacaacatccagaaaga 509 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | ||||| ||||| |||||| |||||| Sbjct: 641 acaaggaaggcattcctcctgaccagcagaggttgattttcgctggcaagcagctggaag 700 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 ||||||| || | |||| |||||||| |||||||| Sbjct: 701 atgggcgcaccctgtctgactacaacatccagaaaga 737
>gb|BC054976.1| Xenopus laevis ubiquitin C, mRNA (cDNA clone MGC:64478 IMAGE:6881420), complete cds Length = 2025 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| |||| ||||| | || |||||||| |||||| |||||| Sbjct: 1092 acaaggaaggcattccccctgaccaacaaagattgatctttgctggtaagcagctggaag 1151 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 ||||| ||||| || |||| ||||| || |||||||| Sbjct: 1152 atgggagaacactatctgactacaatatacagaaaga 1188 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| |||| ||||| | || |||||||| |||||| |||||| Sbjct: 864 acaaggaaggcattccccctgaccaacaaagattgatctttgctggtaagcagctggaag 923 Query: 61 atgggcgaacattagctgattacaacattcagaa 94 ||||| ||||| || |||| ||||| || ||||| Sbjct: 924 atgggagaacactatctgactacaatatacagaa 957 Score = 54.0 bits (27), Expect = 2e-04 Identities = 71/86 (82%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgggcga 68 ||||||||||| ||||||| || ||||||||||||| ||||| |||||||||| || Sbjct: 1556 ggcattccccctgaccagcagagattaatttttgctggtaagcaactggaagatggcaga 1615 Query: 69 acattagctgattacaacattcagaa 94 ||| | |||| ||||| |||||||| Sbjct: 1616 acactgtctgactacaatattcagaa 1641 Score = 54.0 bits (27), Expect = 2e-04 Identities = 53/62 (85%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgggcga 68 |||||||| ||| |||| |||||| | ||||||||||| || ||| |||||||||| ||| Sbjct: 188 ggcattcctccagaccaacaaaggttgatttttgctggcaaacagctggaagatggtcga 247 Query: 69 ac 70 || Sbjct: 248 ac 249 Score = 40.1 bits (20), Expect = 2.7 Identities = 49/59 (83%) Strand = Plus / Plus Query: 12 attcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgggcgaac 70 |||||||| ||||||| || | ||||||||||| ||||| |||||||||| ||||| Sbjct: 1331 attccccctgaccagcagagattgatttttgctggcaagcaactggaagatggccgaac 1389
>gb|AF506969.1| Equus caballus ubiquitin mRNA, complete cds Length = 1157 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 899 aaggagggcatcccccccgaccagcagaggctcatctttgcaggcaagcagctggaagat 958 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 959 ggccgcactctttctgattacaacatccagaaagagt 995 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 215 aaggagggcatcccccccgaccagcagaggctcatctttgcaggcaagcagctggaagat 274 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | | ||||||||||| |||||||||| Sbjct: 275 ggccgcactctttccgattacaacatccagaaagagt 311 Score = 52.0 bits (26), Expect = 7e-04 Identities = 79/97 (81%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||||||||| ||||| ||||||| ||| | || ||||| || |||||| |||| ||| Sbjct: 671 aaggagggcatcccccccgaccagcagaggttcatctttgcaggcaagcagctggaggat 730 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 ||||| || | ||||||||||||| ||||| |||| Sbjct: 731 gggcgcaccctgtctgattacaacatccagaaggagt 767 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||||||||| ||||| ||||||| ||||| || ||||| || |||||| |||| ||| Sbjct: 443 aaggagggcatcccccccgaccagcagaggctcatctttgcaggcaagcagctggaggat 502 Query: 63 gggcg 67 ||||| Sbjct: 503 gggcg 507
>gb|AF321440.1| Galleria mellonella polyubiquitin GmUbintb mRNA, partial cds Length = 228 Score = 67.9 bits (34), Expect = 1e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 12 attcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgg 64 ||||||||| |||| || |||||||| |||||||| ||||||||||||||||| Sbjct: 106 attcccccagaccaacagaggctaatctttgctggtaagcagttggaagatgg 158
>gb|AF321439.1| Galleria mellonella polyubiquitin GmUbinta mRNA, partial cds Length = 228 Score = 67.9 bits (34), Expect = 1e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 12 attcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgg 64 ||||||||| |||| || |||||||| |||||||| ||||||||||||||||| Sbjct: 106 attcccccagaccaacagaggctaatctttgctggtaagcagttggaagatgg 158
>gb|S94464.1| polyubiquitin [maize, Genomic, 3841 nt] Length = 3841 Score = 67.9 bits (34), Expect = 1e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcag 53 |||||||||||||||||||| ||||||| |||| || ||||||||||||||| Sbjct: 2544 acaaggagggcattcccccagaccagcagcggctcatctttgctggaaagcag 2596 Score = 50.1 bits (25), Expect = 0.003 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagca 28 |||||||||||||||||||| ||||||| Sbjct: 3228 acaaggagggcattcccccagaccagca 3255 Score = 46.1 bits (23), Expect = 0.044 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctgg 46 ||||||||||||| |||||| ||||||| |||| || |||||||| Sbjct: 2088 acaaggagggcatccccccagaccagcagcggctcatctttgctgg 2133 Score = 44.1 bits (22), Expect = 0.17 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcag 53 ||||||||||||| || ||| ||||||| |||| || |||||||| |||||| Sbjct: 2316 acaaggagggcatccctccagaccagcagcggctcatctttgctgggaagcag 2368
>ref|NM_174133.2| Bos taurus polyubiquitin (LOC281370), mRNA Length = 1144 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 867 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 926 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 927 ggccgcactctttctgattacaacatccagaaagagt 963 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 639 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 698 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 699 ggccgcactctttctgattacaacatccagaaagagt 735 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||||||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 411 aaggagggcattccccccgaccagcagaggctcatctttgccggcaagcagctggaagat 470 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | |||||||||||| |||||||||| Sbjct: 471 ggccgcactctttttgattacaacatccagaaagagt 507 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 183 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 242 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 243 ggccgcactctttctgattacaacatccagaaagagt 279
>dbj|AB182939.1| Populus nigra PnUB1 mRNA for polyubiquitin, complete cds Length = 1146 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||||||||| || ||| |||| || ||||| || |||||||| ||||| | || ||| Sbjct: 781 aaggagggcatccctccagaccaacagaggctgatctttgctggcaagcaacttgaggat 840 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 ||||| || |||||||||||||||||||||| |||| Sbjct: 841 gggcgtactctagctgattacaacattcagaaggagt 877 Score = 56.0 bits (28), Expect = 5e-05 Identities = 81/99 (81%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| | || || ||||| || |||||||| ||||| | || | Sbjct: 551 acaaagagggcatccccccagatcaacagaggcttatctttgctggcaagcaacttgagg 610 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || |||||||||||||||||||||| |||| Sbjct: 611 atggacgtactctagctgattacaacattcagaaggagt 649
>emb|Z54175.1|BVDTGACB1 Bovine viral diarrhea virus TGAC-B1 RNA Length = 984 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 670 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 729 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 730 ggccgcactctttctgattacaacatccagaaagagt 766
>emb|Z54176.1|BVDCPA2 Bovine viral diarrhea virus cpA2 RNA Length = 984 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 670 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 729 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 730 ggccgcactctttctgattacaacatccagaaagagt 766
>dbj|AB089615.1| Gorilla gorilla UbC gene for polyubiquitin C, complete cds Length = 1830 Score = 67.9 bits (34), Expect = 1e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||||| Sbjct: 116 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgatt 175 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 176 acaacatccagaaagagt 193 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||| || || ||||||| ||| | || ||||||||||||||| |||||| Sbjct: 1007 acaaggaaggcatccctcctgaccagcagaggttgatctttgctggaaagcagctggaag 1066 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1067 atgggcgcaccctgtctgactacaacatccagaaagagt 1105 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||| || || ||||||| ||| | || ||||||||||||||| |||||| Sbjct: 779 acaaggaaggcatccctcctgaccagcagaggttgatctttgctggaaagcagctggaag 838 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 839 atgggcgcaccctgtctgactacaacatccagaaagagt 877
>emb|Z93118.1|MAZ93118 M.acuminata mRNA; clone pBAN UU116 Length = 791 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||||||||||||||| ||||||| ||||| || ||||| || |||||| | || ||| Sbjct: 37 aaggagggcattccccccgaccagcagaggctcatctttgccggcaagcagctcgaggat 96 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || || |||||||||||||| ||||| |||| Sbjct: 97 ggccgcaccttggctgattacaacatccagaaggagt 133 Score = 58.0 bits (29), Expect = 1e-05 Identities = 81/99 (81%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| ||||||| ||||||||||||| || ||||| || |||||| | || | Sbjct: 263 acaaggagggtnttcccccggaccagcaaaggctcatctttgccggcaagcagcttgagg 322 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | || ||||||||||||||||| |||| Sbjct: 323 atggccgcaccctggcagattacaacattcagaaggagt 361
>dbj|AB099044.1| Bos taurus mRNA for similar to polyubiquitin, partial cds, clone: ORCS12767 Length = 534 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 348 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 407 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 408 ggccgcactctttctgattacaacatccagaaagagt 444 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 120 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 179 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 180 ggccgcactctttctgattacaacatccagaaagagt 216
>dbj|AB098769.1| Bos taurus mRNA for similar to polyubiquitin, partial cds, clone: ORCS11653 Length = 486 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Minus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 277 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 218 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 217 ggccgcactctttctgattacaacatccagaaagagt 181 Score = 52.0 bits (26), Expect = 7e-04 Identities = 65/78 (83%) Strand = Plus / Minus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||| || |||||| |||||||||| || || | |||||| Sbjct: 486 accagcagaggctcatctttgccggcaagcagctggaagatggccgcactctttctgatt 427 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 426 acaacatccagaaagagt 409
>gb|AF502575.1| Musa acuminata ubiquitin (UBQ1) gene, complete cds Length = 1146 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 |||||||||||||| ||| ||||||||||||| || ||||| || |||||| | || ||| Sbjct: 325 aaggagggcattcctccagaccagcaaaggctcatctttgccggcaagcagcttgaggat 384 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | |||||||||||||| ||||| |||| Sbjct: 385 ggccgcaccctggctgattacaacatccagaaggagt 421 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| |||||||| ||||||||||||| || ||||| || |||||| | || | Sbjct: 779 acaaggagggtattcccccggaccagcaaaggctcatctttgccggcaagcagcttgagg 838 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | || ||||||||||||||||| |||| Sbjct: 839 atggccgcaccctggcagattacaacattcagaaggagt 877 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 |||||||||||||| || ||||||| ||||| || ||||| || |||||| |||| || Sbjct: 553 aaggagggcattccaccggaccagcagaggctcatctttgccggcaagcagctggaggac 612 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || || |||||||||||||| ||||| |||| Sbjct: 613 ggccgcaccttggctgattacaacatccagaaggagt 649 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| ||||| || | ||||| ||||| || |||||||| |||||| |||| | Sbjct: 1007 acaaggaggggattccaccggatcagcagaggctgatctttgctgggaagcagctggagg 1066 Query: 61 atgggcgaacattagctgattacaacattcagaa 94 | ||||| || | || ||||||||||||||||| Sbjct: 1067 acgggcgcaccctggcagattacaacattcagaa 1100
>gb|U29159.1|ZMU29159 Zea mays clone MubG1 ubiquitin gene, complete cds Length = 4190 Score = 67.9 bits (34), Expect = 1e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcag 53 |||||||||||||||||||| ||||||| |||| || ||||||||||||||| Sbjct: 2665 acaaggagggcattcccccagaccagcagcggctcatctttgctggaaagcag 2717 Score = 50.1 bits (25), Expect = 0.003 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagca 28 |||||||||||||||||||| ||||||| Sbjct: 3577 acaaggagggcattcccccagaccagca 3604 Score = 46.1 bits (23), Expect = 0.044 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctgg 46 ||||||||||||| |||||| ||||||| |||| || |||||||| Sbjct: 2893 acaaggagggcatccccccagaccagcagcggctcatctttgctgg 2938 Score = 46.1 bits (23), Expect = 0.044 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctgg 46 ||||||||||||| |||||| ||||||| |||| || |||||||| Sbjct: 2437 acaaggagggcatccccccagaccagcagcggctcatctttgctgg 2482
>gb|U74358.1|MDU74358 Malus domestica ubiquitin mRNA, partial cds Length = 238 Score = 67.9 bits (34), Expect = 1e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcag 53 ||||||||||||| |||||| ||||||| ||||| || ||||||||||||||| Sbjct: 105 acaaggagggcatccccccagaccagcagaggcttatctttgctggaaagcag 157
>emb|Z18245.1|BTPOLYUB Bos taurus gene for polyubiquitin Length = 1144 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 867 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 926 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 927 ggccgcactctttctgattacaacatccagaaagagt 963 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 639 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 698 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 699 ggccgcactctttctgattacaacatccagaaagagt 735 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||||||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 411 aaggagggcattccccccgaccagcagaggctcatctttgccggcaagcagctggaagat 470 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | |||||||||||| |||||||||| Sbjct: 471 ggccgcactctttttgattacaacatccagaaagagt 507 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 183 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 242 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 243 ggccgcactctttctgattacaacatccagaaagagt 279
>gb|M62431.1|BVDCP1 Bovine viral diarrhea virus CP1 putative helcase/protease mRNA, partial cds Length = 5688 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 3064 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 3123 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 3124 ggccgcactctttctgattacaacatccagaaagagt 3160 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 2836 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 2895 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 2896 ggccgcactctttctgattacaacatccagaaagagt 2932
>gb|M62429.1|BOVPOUBA Bovine polyubiquitin mRNA, 3' end, clone rpub2 Length = 636 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 359 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 418 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 419 ggccgcactctttctgattacaacatccagaaagagt 455 Score = 67.9 bits (34), Expect = 1e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||| Sbjct: 131 aaggaaggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagat 190 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 191 ggccgcactctttctgattacaacatccagaaagagt 227
>emb|CR728830.2|CNS0GPB8 Tetraodon nigroviridis full-length cDNA Length = 755 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| ||||||||||| |||||| |||||| Sbjct: 398 acaaggaaggcattccccctgatcagcagaggcttatttttgctggcaagcagctggaag 457 Query: 61 atgg 64 |||| Sbjct: 458 atgg 461 Score = 54.0 bits (27), Expect = 2e-04 Identities = 53/62 (85%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| | ||||| ||||| || ||||||||||||||| | |||||| Sbjct: 628 aaggaaggcattccccctgatcagcagaggctgatctttgctggaaagcagcttgaagat 687 Query: 63 gg 64 || Sbjct: 688 gg 689 Score = 50.1 bits (25), Expect = 0.003 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| | |||| Sbjct: 170 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagcttgaag 229 Query: 61 atgg 64 |||| Sbjct: 230 atgg 233
>emb|CR704595.2|CNS0G6M7 Tetraodon nigroviridis full-length cDNA Length = 808 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 553 acaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcagctggaag 612 Query: 61 atgg 64 |||| Sbjct: 613 atgg 616
>emb|CR704024.2|CNS0G66C Tetraodon nigroviridis full-length cDNA Length = 804 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 551 acaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcagctggaag 610 Query: 61 atgg 64 |||| Sbjct: 611 atgg 614 Score = 58.0 bits (29), Expect = 1e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 96 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaag 155 Query: 61 atgg 64 |||| Sbjct: 156 atgg 159
>emb|CR703290.2|CNS0G5LY Tetraodon nigroviridis full-length cDNA Length = 527 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 268 acaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcagctggaag 327 Query: 61 atgg 64 |||| Sbjct: 328 atgg 331 Score = 50.1 bits (25), Expect = 0.003 Identities = 48/56 (85%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgg 64 ||||||||||| | ||||| ||||| || |||||||| |||||| |||||||||| Sbjct: 48 ggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaagatgg 103
>emb|CR699785.2|CNS0G2WL Tetraodon nigroviridis full-length cDNA Length = 800 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 551 acaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcagctggaag 610 Query: 61 atgg 64 |||| Sbjct: 611 atgg 614 Score = 50.1 bits (25), Expect = 0.003 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| | |||| Sbjct: 323 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagcttgaag 382 Query: 61 atgg 64 |||| Sbjct: 383 atgg 386
>emb|CR696478.2|CNS0G0CQ Tetraodon nigroviridis full-length cDNA Length = 804 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 553 acaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcagctggaag 612 Query: 61 atgg 64 |||| Sbjct: 613 atgg 616 Score = 58.0 bits (29), Expect = 1e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 97 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaag 156 Query: 61 atgg 64 |||| Sbjct: 157 atgg 160
>emb|CR696292.2|CNS0G07K Tetraodon nigroviridis full-length cDNA Length = 809 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 551 acaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcagctggaag 610 Query: 61 atgg 64 |||| Sbjct: 611 atgg 614
>emb|CR695995.3|CNS0FZZB Tetraodon nigroviridis full-length cDNA Length = 810 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 552 acaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcagctggaag 611 Query: 61 atgg 64 |||| Sbjct: 612 atgg 615 Score = 50.1 bits (25), Expect = 0.003 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| | |||| Sbjct: 324 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagcttgaag 383 Query: 61 atgg 64 |||| Sbjct: 384 atgg 387 Score = 50.1 bits (25), Expect = 0.003 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| | |||| Sbjct: 96 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagcttgaag 155 Query: 61 atgg 64 |||| Sbjct: 156 atgg 159
>emb|CR695975.2|CNS0FZYR Tetraodon nigroviridis full-length cDNA Length = 791 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 557 acaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcagctggaag 616 Query: 61 atgg 64 |||| Sbjct: 617 atgg 620 Score = 44.1 bits (22), Expect = 0.17 Identities = 45/53 (84%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaaga 61 ||||||||||| | ||||| ||||| || |||||||| |||||| ||||||| Sbjct: 334 ggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaaga 386
>emb|CR693873.3|CNS0FYCD Tetraodon nigroviridis full-length cDNA Length = 800 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 551 acaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcagctggaag 610 Query: 61 atgg 64 |||| Sbjct: 611 atgg 614 Score = 58.0 bits (29), Expect = 1e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 96 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaag 155 Query: 61 atgg 64 |||| Sbjct: 156 atgg 159
>emb|CR682459.2|CNS0FPJB Tetraodon nigroviridis full-length cDNA Length = 810 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 553 acaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcagctggaag 612 Query: 61 atgg 64 |||| Sbjct: 613 atgg 616 Score = 44.1 bits (22), Expect = 0.17 Identities = 55/65 (84%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 1 acaaggagggcattccc-ccanaccagcaaaggctaatttttgctggaaagcagttggaa 59 ||||||| ||||||||| || | ||||| ||||| || |||||||| |||||| ||||| Sbjct: 96 acaaggaaggcattcccccctgatcagcagaggctgatctttgctggcaagcagctggaa 155 Query: 60 gatgg 64 ||||| Sbjct: 156 gatgg 160
>emb|CR662492.2|CNS0FA5E Tetraodon nigroviridis full-length cDNA Length = 752 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 553 acaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcagctggaag 612 Query: 61 atgg 64 |||| Sbjct: 613 atgg 616 Score = 58.0 bits (29), Expect = 1e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 324 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaag 383 Query: 61 atgg 64 |||| Sbjct: 384 atgg 387 Score = 50.1 bits (25), Expect = 0.003 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| | |||| Sbjct: 96 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagcttgaag 155 Query: 61 atgg 64 |||| Sbjct: 156 atgg 159
>emb|CR658953.2|CNS0F7F3 Tetraodon nigroviridis full-length cDNA Length = 683 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| ||||||||||| |||||| |||||| Sbjct: 324 acaaggaaggcattccccctgatcagcagaggctgatttttgctggcaagcagctggaag 383 Query: 61 atgg 64 |||| Sbjct: 384 atgg 387 Score = 58.0 bits (29), Expect = 1e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 96 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaag 155 Query: 61 atgg 64 |||| Sbjct: 156 atgg 159 Score = 50.1 bits (25), Expect = 0.003 Identities = 48/56 (85%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgg 64 ||||||||||| | ||||| ||||| || |||||||| |||||| |||||||||| Sbjct: 562 ggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaagatgg 617
>emb|CR657552.2|CNS0F6C6 Tetraodon nigroviridis full-length cDNA Length = 810 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 553 acaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcagctggaag 612 Query: 61 atgg 64 |||| Sbjct: 613 atgg 616 Score = 58.0 bits (29), Expect = 1e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 96 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaag 155 Query: 61 atgg 64 |||| Sbjct: 156 atgg 159 Score = 50.1 bits (25), Expect = 0.003 Identities = 48/56 (85%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgg 64 ||||||||||| | ||||| ||||| || |||||||| |||||| |||||||||| Sbjct: 333 ggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaagatgg 388
>emb|CR648990.2|CNS0EZQC Tetraodon nigroviridis full-length cDNA Length = 755 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 552 acaaggaaggcattcccccagatcagcagaggctgatctttgctggcaagcagctggaag 611 Query: 61 atgg 64 |||| Sbjct: 612 atgg 615 Score = 58.0 bits (29), Expect = 1e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 324 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaag 383 Query: 61 atgg 64 |||| Sbjct: 384 atgg 387 Score = 50.1 bits (25), Expect = 0.003 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| | |||| Sbjct: 96 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagcttgaag 155 Query: 61 atgg 64 |||| Sbjct: 156 atgg 159
>emb|AM040011.1| Agriotes lineatus mRNA for ubiquitin/ribosomal protein S27Ae fusion protein (ubq/S27Ae gene) Length = 474 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| || || |||||| |||||||| | ||||||||||||| ||||||||||||| Sbjct: 95 acaaggaaggtatccccccagaccagcaacgtttaatttttgctggcaagcagttggaag 154 Query: 61 atgg 64 |||| Sbjct: 155 atgg 158
>gb|DQ103694.1| Ictalurus punctatus polyubiquitin mRNA, partial cds Length = 576 Score = 65.9 bits (33), Expect = 5e-08 Identities = 50/56 (89%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgg 64 |||||||||||| ||||||| ||||| || |||||||| |||||| |||||||||| Sbjct: 127 ggcattcccccagaccagcagaggctgatctttgctggcaagcagctggaagatgg 182
>emb|Z28649.1|ACPOLUB Acetabularia cliftonii gene for polyubiquitin Length = 3442 Score = 65.9 bits (33), Expect = 5e-08 Identities = 78/94 (82%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 |||| ||||| || |||||||| |||||||||||||||||||| | ||| || ||||||| Sbjct: 2296 accaacaaagacttatttttgccggaaagcagttggaagatggactaactttggctgatt 2355 Query: 82 acaacattcagaaagagtnttntntccatttggt 115 | || || || ||||||| | | |||||||||| Sbjct: 2356 ataatatccaaaaagagtctactctccatttggt 2389 Score = 60.0 bits (30), Expect = 3e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 34 taatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcaga 93 |||||||||| |||||| |||||||||||||| ||||| | ||||| || || ||||| | Sbjct: 3220 taatttttgccggaaagtagttggaagatgggagaacactggctgactataatattcaaa 3279 Query: 94 aagagt 99 |||||| Sbjct: 3280 aagagt 3285 Score = 44.1 bits (22), Expect = 0.17 Identities = 78/97 (80%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 |||||||| |||||||| | ||| | || || ||||||||||| ||| | ||||| ||| Sbjct: 2505 aaggagggtattccccctgatcagtagagacttatttttgctggtaagtaattggaggat 2564 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || ||||| | || |||||||| |||||||| |||| Sbjct: 2565 ggtcgaactctggcagattacaatattcagaaggagt 2601 Score = 42.1 bits (21), Expect = 0.68 Identities = 45/53 (84%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattca 91 ||||| |||||||| |||||||| || || || || || |||||||||||||| Sbjct: 2085 tttgccggaaagcaattggaagacggacggactttggcggattacaacattca 2137
>emb|X64344.1|PCCUBI41 P.crispum mRNA Pcubi4-1 for polyubiquitin Length = 1592 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| || ||||||||| ||||||| || | || |||||||||||||||||||||| Sbjct: 121 acaaggaagggattcccccagaccagcagagattgatctttgctggaaagcagttggaag 180 Query: 61 atgg 64 |||| Sbjct: 181 atgg 184 Score = 58.0 bits (29), Expect = 1e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgg 64 |||||||||||| ||||||| || | ||||| ||||| ||||||||||||||||| Sbjct: 813 ggcattcccccagaccagcagagattgattttcgctggcaagcagttggaagatgg 868 Score = 52.0 bits (26), Expect = 7e-04 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaa 49 |||||||||| ||||||||| ||||||| ||| | || ||||||||||| Sbjct: 349 acaaggagggaattcccccagaccagcagaggttgatctttgctggaaa 397 Score = 42.1 bits (21), Expect = 0.68 Identities = 44/52 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagca 52 ||||||| || ||||||||| ||||||| ||| | || || ||||||||||| Sbjct: 577 acaaggaaggaattcccccagaccagcagaggttgatcttcgctggaaagca 628 Score = 40.1 bits (20), Expect = 2.7 Identities = 43/51 (84%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcag 53 |||||||| ||||| ||| | ||||| ||| | || ||||||||||||||| Sbjct: 1263 aaggagggtattcctccagatcagcagaggttgatctttgctggaaagcag 1313
>emb|AJ844615.1| Plantago major ubq1 gene for polyubiquitin Length = 1189 Score = 65.9 bits (33), Expect = 5e-08 Identities = 77/92 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 |||||||||||||||||| ||||||| ||| | || ||||| || ||||| | || ||| Sbjct: 385 aaggagggcattcccccagaccagcagaggttgatctttgccggcaagcaacttgaggat 444 Query: 63 gggcgaacattagctgattacaacattcagaa 94 ||||| || | |||||||||||||||||||| Sbjct: 445 gggcgtacccttgctgattacaacattcagaa 476 Score = 46.1 bits (23), Expect = 0.044 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttgga 58 ||||||| || || || ||| ||||||| ||||| || || ||||||||||||||||| Sbjct: 839 acaaggaaggtatccctccagaccagcagaggctcatcttcgctggaaagcagttgga 896
>gb|DQ363465.1| Ictalurus punctatus clone C153BB02 ubiquitin C mRNA, partial cds Length = 579 Score = 65.9 bits (33), Expect = 5e-08 Identities = 50/56 (89%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgg 64 |||||||||||| ||||||| ||||| || |||||||| |||||| |||||||||| Sbjct: 448 ggcattcccccagaccagcagaggctgatctttgctggcaagcagctggaagatgg 503 Score = 58.0 bits (29), Expect = 1e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgg 64 |||||||||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 220 ggcattcccccagaccagcagaggctgatctttgccggcaagcagctggaagatgg 275
>ref|NM_171868.3| Caenorhabditis elegans UBiQuitin family member (ubq-1) (ubq-1) mRNA, complete cds Length = 1622 Score = 65.9 bits (33), Expect = 5e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagag 98 |||||||||||||| ||||||||||| || ||| | |||||||||| |||||||||||| Sbjct: 366 tttgctggaaagcaattggaagatggacgcacactctctgattacaatattcagaaagag 425 Query: 99 t 99 | Sbjct: 426 t 426 Score = 42.1 bits (21), Expect = 0.68 Identities = 44/52 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagca 52 ||||||| || ||||| ||| | ||||| || || ||||||||||||||||| Sbjct: 784 acaaggaaggaattccaccagatcagcagagacttatttttgctggaaagca 835
>ref|NM_171139.3| Caenorhabditis elegans UBiQuitin family member (ubq-1) (ubq-1) mRNA, complete cds Length = 2826 Score = 65.9 bits (33), Expect = 5e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagag 98 |||||||||||||| ||||||||||| || ||| | |||||||||| |||||||||||| Sbjct: 544 tttgctggaaagcaattggaagatggacgcacactctctgattacaatattcagaaagag 603 Query: 99 t 99 | Sbjct: 604 t 604 Score = 56.0 bits (28), Expect = 5e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaa 94 ||||| |||||||| |||||||||||||| || | ||||||||||||||||||| Sbjct: 1684 tttgccggaaagcaattggaagatgggcgcacgctctctgattacaacattcagaa 1739 Score = 42.1 bits (21), Expect = 0.68 Identities = 44/52 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagca 52 ||||||| || ||||| ||| | ||||| || || ||||||||||||||||| Sbjct: 962 acaaggaaggaattccaccagatcagcagagacttatttttgctggaaagca 1013
>gb|AF154647.1| Nicotiana tabacum clone PR32 mRNA sequence Length = 637 Score = 65.9 bits (33), Expect = 5e-08 Identities = 77/92 (83%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 |||||||||||||||||| ||||||| ||| | || || ||||| |||||| | || ||| Sbjct: 310 aaggagggcattcccccagaccagcagaggttgatattcgctggcaagcagctcgaggat 369 Query: 63 gggcgaacattagctgattacaacattcagaa 94 || || || |||||||||||||||| ||||| Sbjct: 370 ggccgtaccctagctgattacaacatccagaa 401 Score = 40.1 bits (20), Expect = 2.7 Identities = 79/99 (79%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| || ||||||||| | ||||||||||| || || || || |||||| | || | Sbjct: 80 acaaggaaggaattcccccagatcagcaaaggcttatcttcgccggcaagcagcttgagg 139 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 | || || || |||| ||||||||||| ||||| |||| Sbjct: 140 acggacgtaccctagccgattacaacatccagaaggagt 178
>emb|AJ538489.1|NTA538489 Nicotiana tabacum cDNA-AFLP-fragment BC2-M23-040 Length = 445 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| ||||| |||||||| | ||||| ||||| ||||||||||| ||||||||||||| Sbjct: 166 acaatgagggtattcccccggatcagcagaggctgatttttgctgggaagcagttggaag 225 Query: 61 atgg 64 |||| Sbjct: 226 atgg 229
>gb|DQ278173.1| Theileria lestoquardi clone 34 unknown mRNA Length = 804 Score = 65.9 bits (33), Expect = 5e-08 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| || || || ||| |||||||||| |||||||||||||||||||| || |||| Sbjct: 320 acaaggaaggtatccctccagaccagcaaagactaatttttgctggaaagcaattagaag 379 Query: 61 atgg 64 |||| Sbjct: 380 atgg 383 Score = 56.0 bits (28), Expect = 5e-05 Identities = 42/47 (89%) Strand = Plus / Plus Query: 18 ccanaccagcaaaggctaatttttgctggaaagcagttggaagatgg 64 ||| |||||||||| ||||| |||||||||||||| || |||||||| Sbjct: 565 ccagaccagcaaagactaatctttgctggaaagcaattagaagatgg 611
>gb|AY819759.1| Homo sapiens ubiquitin C splice variant (UBC) mRNA, complete cds, alternatively spliced Length = 718 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 341 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 400 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 401 atgggcgcaccctgtctgactacaacatccagaaagagt 439 Score = 60.0 bits (30), Expect = 3e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||| | Sbjct: 134 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgact 193 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 194 acaacatccagaaagagt 211
>gb|BC080583.1| Homo sapiens cDNA clone IMAGE:2822684, partial cds Length = 2187 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 820 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 879 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 880 atgggcgcaccctgtctgactacaacatccagaaagagt 918 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 364 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 423 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 424 atgggcgcaccctgtctgactacaacatccagaaagagt 462 Score = 60.0 bits (30), Expect = 3e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||| | Sbjct: 157 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgact 216 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 217 acaacatccagaaagagt 234
>ref|XM_586525.2| PREDICTED: Bos taurus polyubiquitin, transcript variant 1 (UBC), mRNA Length = 2416 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1071 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1130 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1131 atgggcgcaccctgtctgactacaacatccagaaagagt 1169 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 387 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 446 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 447 atgggcgcaccctgtctgactacaacatccagaaagagt 485 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1527 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1586 Query: 61 atgggcg 67 ||||||| Sbjct: 1587 atgggcg 1593
>ref|XM_874972.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 17 (UBC), mRNA Length = 2588 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1471 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1530 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1531 atgggcgcaccctgtctgactacaacatccagaaagagt 1569 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 787 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 846 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 847 atgggcgcaccctgtctgactacaacatccagaaagagt 885 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 331 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 390 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 391 atgggcgcaccctgtctgactacaacatccagaaagagt 429 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1699 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1758 Query: 61 atgggcg 67 ||||||| Sbjct: 1759 atgggcg 1765
>ref|XM_874894.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 16 (UBC), mRNA Length = 2416 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1071 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1130 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1131 atgggcgcaccctgtctgactacaacatccagaaagagt 1169 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 387 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 446 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 447 atgggcgcaccctgtctgactacaacatccagaaagagt 485
>ref|XM_875774.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 27 (UBC), mRNA Length = 2458 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1341 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1400 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1401 atgggcgcaccctgtctgactacaacatccagaaagagt 1439 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 657 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 716 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 717 atgggcgcaccctgtctgactacaacatccagaaagagt 755 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1569 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1628 Query: 61 atgggcg 67 ||||||| Sbjct: 1629 atgggcg 1635
>ref|XM_874811.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 15 (UBC), mRNA Length = 2416 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1071 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1130 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1131 atgggcgcaccctgtctgactacaacatccagaaagagt 1169 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 387 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 446 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 447 atgggcgcaccctgtctgactacaacatccagaaagagt 485 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1527 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1586 Query: 61 atgggcg 67 ||||||| Sbjct: 1587 atgggcg 1593
>ref|XM_874725.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 14 (UBC), mRNA Length = 2644 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1755 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1814 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1815 atgggcgcaccctgtctgactacaacatccagaaagagt 1853 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1071 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1130 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1131 atgggcgcaccctgtctgactacaacatccagaaagagt 1169 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 387 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 446 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 447 atgggcgcaccctgtctgactacaacatccagaaagagt 485
>ref|XM_874640.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 13 (UBC), mRNA Length = 2644 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1527 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1586 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1587 atgggcgcaccctgtctgactacaacatccagaaagagt 1625 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1071 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1130 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1131 atgggcgcaccctgtctgactacaacatccagaaagagt 1169 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 387 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 446 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 447 atgggcgcaccctgtctgactacaacatccagaaagagt 485 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1755 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1814 Query: 61 atgggcg 67 ||||||| Sbjct: 1815 atgggcg 1821
>ref|XM_875701.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 26 (UBC), mRNA Length = 2580 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1463 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1522 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1523 atgggcgcaccctgtctgactacaacatccagaaagagt 1561 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 779 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 838 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 839 atgggcgcaccctgtctgactacaacatccagaaagagt 877 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1691 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1750 Query: 61 atgggcg 67 ||||||| Sbjct: 1751 atgggcg 1757
>ref|XM_875631.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 25 (UBC), mRNA Length = 2644 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1527 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1586 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1587 atgggcgcaccctgtctgactacaacatccagaaagagt 1625 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1071 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1130 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1131 atgggcgcaccctgtctgactacaacatccagaaagagt 1169 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 387 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 446 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 447 atgggcgcaccctgtctgactacaacatccagaaagagt 485 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1755 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1814 Query: 61 atgggcg 67 ||||||| Sbjct: 1815 atgggcg 1821
>ref|XM_875556.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 24 (UBC), mRNA Length = 2580 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1463 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1522 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1523 atgggcgcaccctgtctgactacaacatccagaaagagt 1561 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 779 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 838 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 839 atgggcgcaccctgtctgactacaacatccagaaagagt 877 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 323 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 382 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 383 atgggcgcaccctgtctgactacaacatccagaaagagt 421 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1691 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1750 Query: 61 atgggcg 67 ||||||| Sbjct: 1751 atgggcg 1757
>ref|XM_875261.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 20 (UBC), mRNA Length = 2643 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1755 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1814 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1815 atgggcgcaccctgtctgactacaacatccagaaagagt 1853 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1071 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1130 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1131 atgggcgcaccctgtctgactacaacatccagaaagagt 1169 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 387 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 446 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 447 atgggcgcaccctgtctgactacaacatccagaaagagt 485 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1983 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 2042 Query: 61 atgggcg 67 ||||||| Sbjct: 2043 atgggcg 2049
>ref|XM_875198.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 19 (UBC), mRNA Length = 2588 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1471 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1530 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1531 atgggcgcaccctgtctgactacaacatccagaaagagt 1569 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 787 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 846 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 847 atgggcgcaccctgtctgactacaacatccagaaagagt 885 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 331 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 390 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 391 atgggcgcaccctgtctgactacaacatccagaaagagt 429 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1699 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1758 Query: 61 atgggcg 67 ||||||| Sbjct: 1759 atgggcg 1765
>ref|XM_875130.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 18 (UBC), mRNA Length = 2825 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1755 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1814 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1815 atgggcgcaccctgtctgactacaacatccagaaagagt 1853 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1071 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1130 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1131 atgggcgcaccctgtctgactacaacatccagaaagagt 1169 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 387 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 446 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 447 atgggcgcaccctgtctgactacaacatccagaaagagt 485 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1983 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 2042 Query: 61 atgggcg 67 ||||||| Sbjct: 2043 atgggcg 2049
>ref|XM_875488.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 23 (UBC), mRNA Length = 2644 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1527 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1586 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1587 atgggcgcaccctgtctgactacaacatccagaaagagt 1625 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1071 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1130 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1131 atgggcgcaccctgtctgactacaacatccagaaagagt 1169 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 387 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 446 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 447 atgggcgcaccctgtctgactacaacatccagaaagagt 485 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1755 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1814 Query: 61 atgggcg 67 ||||||| Sbjct: 1815 atgggcg 1821
>ref|XM_875413.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 22 (UBC), mRNA Length = 2644 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1755 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1814 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1815 atgggcgcaccctgtctgactacaacatccagaaagagt 1853 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1071 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1130 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1131 atgggcgcaccctgtctgactacaacatccagaaagagt 1169 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 387 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 446 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 447 atgggcgcaccctgtctgactacaacatccagaaagagt 485
>ref|XM_875335.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 21 (UBC), mRNA Length = 2659 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1542 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1601 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1602 atgggcgcaccctgtctgactacaacatccagaaagagt 1640 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 387 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 446 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 447 atgggcgcaccctgtctgactacaacatccagaaagagt 485 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1770 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1829 Query: 61 atgggcg 67 ||||||| Sbjct: 1830 atgggcg 1836
>ref|XM_874550.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 12 (UBC), mRNA Length = 2188 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1071 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1130 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1131 atgggcgcaccctgtctgactacaacatccagaaagagt 1169 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 387 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 446 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 447 atgggcgcaccctgtctgactacaacatccagaaagagt 485
>ref|XM_874473.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 11 (UBC), mRNA Length = 2415 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1755 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1814 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1815 atgggcgcaccctgtctgactacaacatccagaaagagt 1853 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1071 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1130 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1131 atgggcgcaccctgtctgactacaacatccagaaagagt 1169 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 387 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 446 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 447 atgggcgcaccctgtctgactacaacatccagaaagagt 485
>ref|XM_874390.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 10 (UBC), mRNA Length = 2415 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1755 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1814 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1815 atgggcgcaccctgtctgactacaacatccagaaagagt 1853 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1071 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1130 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1131 atgggcgcaccctgtctgactacaacatccagaaagagt 1169 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 387 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 446 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 447 atgggcgcaccctgtctgactacaacatccagaaagagt 485
>ref|XM_874317.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 9 (UBC), mRNA Length = 2416 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1071 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1130 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1131 atgggcgcaccctgtctgactacaacatccagaaagagt 1169 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 387 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 446 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 447 atgggcgcaccctgtctgactacaacatccagaaagagt 485
>ref|XM_874230.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 8 (UBC), mRNA Length = 2613 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1496 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1555 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1556 atgggcgcaccctgtctgactacaacatccagaaagagt 1594 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 248 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 307 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 308 atgggcgcaccctgtctgactacaacatccagaaagagt 346 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1724 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1783 Query: 61 atgggcg 67 ||||||| Sbjct: 1784 atgggcg 1790 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 932 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 991 Query: 61 atgggcg 67 ||||||| Sbjct: 992 atgggcg 998
>ref|XM_874142.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 7 (UBC), mRNA Length = 2172 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1015 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1074 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1075 atgggcgcaccctgtctgactacaacatccagaaagagt 1113 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 331 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 390 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 391 atgggcgcaccctgtctgactacaacatccagaaagagt 429 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1243 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1302 Query: 61 atgggcg 67 ||||||| Sbjct: 1303 atgggcg 1309
>ref|XM_874048.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 6 (UBC), mRNA Length = 1904 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 787 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 846 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 847 atgggcgcaccctgtctgactacaacatccagaaagagt 885 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 331 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 390 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 391 atgggcgcaccctgtctgactacaacatccagaaagagt 429 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1015 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1074 Query: 61 atgggcg 67 ||||||| Sbjct: 1075 atgggcg 1081
>ref|XM_873963.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 5 (UBC), mRNA Length = 1883 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1528 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1587 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1588 atgggcgcaccctgtctgactacaacatccagaaagagt 1626 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1071 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1130 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1131 atgggcgcaccctgtctgactacaacatccagaaagagt 1169 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 387 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 446 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 447 atgggcgcaccctgtctgactacaacatccagaaagagt 485 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1756 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1815 Query: 61 atgggcg 67 ||||||| Sbjct: 1816 atgggcg 1822
>ref|XM_873860.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 4 (UBC), mRNA Length = 1546 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 429 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 488 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 489 atgggcgcaccctgtctgactacaacatccagaaagagt 527 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 657 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 716 Query: 61 atgggcg 67 ||||||| Sbjct: 717 atgggcg 723
>ref|XM_864638.1| PREDICTED: Bos taurus polyubiquitin, transcript variant 3 (UBC), mRNA Length = 2872 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1755 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1814 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1815 atgggcgcaccctgtctgactacaacatccagaaagagt 1853 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1071 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 1130 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1131 atgggcgcaccctgtctgactacaacatccagaaagagt 1169 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 387 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 446 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 447 atgggcgcaccctgtctgactacaacatccagaaagagt 485 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| ||||| || ||||| || || ||| |||||| Sbjct: 1983 acaaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaag 2042 Query: 61 atgggcg 67 ||||||| Sbjct: 2043 atgggcg 2049
>gb|BC039193.1| Homo sapiens ubiquitin C, mRNA (cDNA clone MGC:14624 IMAGE:4076286), complete cds Length = 2222 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 847 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 906 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 907 atgggcgcaccctgtctgactacaacatccagaaagagt 945 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 391 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 450 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 451 atgggcgcaccctgtctgactacaacatccagaaagagt 489 Score = 60.0 bits (30), Expect = 3e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||| | Sbjct: 184 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgact 243 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 244 acaacatccagaaagagt 261
>gb|AY489050.1| Capsicum annuum polyubiquitin Ubi mRNA, partial sequence Length = 483 Score = 63.9 bits (32), Expect = 2e-07 Identities = 71/85 (83%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| || ||| | ||||||||| | |||||||||| ||||||||||||| Sbjct: 395 acaaagagggcatcccaccagatcagcaaaggttgatttttgctgnnaagcagttggaag 454 Query: 61 atgggcgaacattagctgattacaa 85 |||| || ||| | || |||||||| Sbjct: 455 atggacggacactggccgattacaa 479 Score = 40.1 bits (20), Expect = 2.7 Identities = 79/99 (79%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| || || |||||| |||||||||| | || || |||||||||||| | || | Sbjct: 167 acaaggaaggaatccccccagaccagcaaagattgatcttcgctggaaagcagcttgagg 226 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 | || || || | |||||||||||||| ||||| |||| Sbjct: 227 acggccgcacccttgctgattacaacatccagaaggagt 265
>gb|BC000449.2| Homo sapiens ubiquitin C, mRNA (cDNA clone IMAGE:2821375), partial cds Length = 2201 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 832 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 891 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 892 atgggcgcaccctgtctgactacaacatccagaaagagt 930 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 376 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 435 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 436 atgggcgcaccctgtctgactacaacatccagaaagagt 474 Score = 60.0 bits (30), Expect = 3e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||| | Sbjct: 169 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgact 228 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 229 acaacatccagaaagagt 246
>gb|BC008955.2| Homo sapiens ubiquitin C, mRNA (cDNA clone IMAGE:3030313), partial cds Length = 1728 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 820 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 879 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 880 atgggcgcaccctgtctgactacaacatccagaaagagt 918 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 364 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 423 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 424 atgggcgcaccctgtctgactacaacatccagaaagagt 462 Score = 60.0 bits (30), Expect = 3e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||| | Sbjct: 157 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgact 216 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 217 acaacatccagaaagagt 234
>emb|CR715881.2|CNS0GFBP Tetraodon nigroviridis full-length cDNA Length = 763 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 552 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaag 611 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | |||| |||||||| |||||||||| Sbjct: 612 atggccgcaccctgtctgactacaacatccagaaagagt 650 Score = 56.0 bits (28), Expect = 5e-05 Identities = 75/91 (82%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgggcga 68 ||||||||||| | ||||| ||||| || |||||||| |||||| |||||||||| || Sbjct: 332 ggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaagatggccgc 391 Query: 69 acattagctgattacaacattcagaaagagt 99 || | |||| |||||||| |||||||||| Sbjct: 392 accctctctgactacaacatccagaaagagt 422 Score = 50.1 bits (25), Expect = 0.003 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| | |||| Sbjct: 96 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagcttgaag 155 Query: 61 atgg 64 |||| Sbjct: 156 atgg 159
>emb|CR715028.2|CNS0GEO0 Tetraodon nigroviridis full-length cDNA Length = 812 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 552 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaag 611 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | |||| |||||||| |||||||||| Sbjct: 612 atggccgcaccctgtctgactacaacatccagaaagagt 650 Score = 56.0 bits (28), Expect = 5e-05 Identities = 75/91 (82%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgggcga 68 ||||||||||| | ||||| ||||| || |||||||| |||||| |||||||||| || Sbjct: 332 ggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaagatggccgc 391 Query: 69 acattagctgattacaacattcagaaagagt 99 || | |||| |||||||| |||||||||| Sbjct: 392 accctctctgactacaacatccagaaagagt 422 Score = 50.1 bits (25), Expect = 0.003 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| | |||| Sbjct: 96 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagcttgaag 155 Query: 61 atgg 64 |||| Sbjct: 156 atgg 159
>emb|CR708062.2|CNS0G9AI Tetraodon nigroviridis full-length cDNA Length = 681 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 527 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaag 586 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | |||| |||||||| |||||||||| Sbjct: 587 atggccgcaccctgtctgactacaacatccagaaagagt 625 Score = 50.1 bits (25), Expect = 0.003 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| | |||| Sbjct: 299 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagcttgaag 358 Query: 61 atgg 64 |||| Sbjct: 359 atgg 362 Score = 50.1 bits (25), Expect = 0.003 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| | |||| Sbjct: 71 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagcttgaag 130 Query: 61 atgg 64 |||| Sbjct: 131 atgg 134
>emb|CR700205.2|CNS0G389 Tetraodon nigroviridis full-length cDNA Length = 803 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 96 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaag 155 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | |||| |||||||| |||||||||| Sbjct: 156 atggccgcaccctctctgactacaacatccagaaagagt 194 Score = 50.1 bits (25), Expect = 0.003 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| | |||| Sbjct: 551 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagcttgaag 610 Query: 61 atgg 64 |||| Sbjct: 611 atgg 614
>emb|CR693750.2|CNS0FY8Y Tetraodon nigroviridis full-length cDNA Length = 807 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 96 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaag 155 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | |||| |||||||| |||||||||| Sbjct: 156 atggccgcaccctgtctgactacaacatccagaaagagt 194 Score = 50.1 bits (25), Expect = 0.003 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| | |||| Sbjct: 552 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctagaag 611 Query: 61 atgg 64 |||| Sbjct: 612 atgg 615 Score = 42.1 bits (21), Expect = 0.68 Identities = 47/56 (83%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgg 64 ||||||||||| | ||||| ||||| || |||||||| |||||| | |||||||| Sbjct: 332 ggcattccccctgatcagcagaggctgatctttgctggcaagcagcttgaagatgg 387
>emb|CR685100.2|CNS0FRKO Tetraodon nigroviridis full-length cDNA Length = 793 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 96 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaag 155 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | |||| |||||||| |||||||||| Sbjct: 156 atggccgcaccctgtctgactacaacatccagaaagagt 194 Score = 50.1 bits (25), Expect = 0.003 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| | |||| Sbjct: 551 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctagaag 610 Query: 61 atgg 64 |||| Sbjct: 611 atgg 614
>emb|CR678171.2|CNS0FM8F Tetraodon nigroviridis full-length cDNA Length = 815 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 96 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaag 155 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | |||| |||||||| |||||||||| Sbjct: 156 atggccgcaccctgtctgactacaacatccagaaagagt 194 Score = 50.1 bits (25), Expect = 0.003 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| | |||| Sbjct: 556 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctagaag 615 Query: 61 atgg 64 |||| Sbjct: 616 atgg 619
>emb|CR664212.2|CNS0FBH6 Tetraodon nigroviridis full-length cDNA Length = 809 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 96 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaag 155 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | |||| |||||||| |||||||||| Sbjct: 156 atggccgcaccctgtctgactacaacatccagaaagagt 194 Score = 50.1 bits (25), Expect = 0.003 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| | |||| Sbjct: 551 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctagaag 610 Query: 61 atgg 64 |||| Sbjct: 611 atgg 614
>emb|CR634439.2|CNS0EOI5 Tetraodon nigroviridis full-length cDNA Length = 810 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| |||||| Sbjct: 96 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctggaag 155 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | |||| |||||||| |||||||||| Sbjct: 156 atggccgcaccctgtctgactacaacatccagaaagagt 194 Score = 50.1 bits (25), Expect = 0.003 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||||||||| | ||||| ||||| || |||||||| |||||| | |||| Sbjct: 552 acaaggaaggcattccccctgatcagcagaggctgatctttgctggcaagcagctagaag 611 Query: 61 atgg 64 |||| Sbjct: 612 atgg 615
>gb|AF527441.1| Phaseolus vulgaris clone PvDR-8 polyubiquitin 1 mRNA, partial cds Length = 376 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||| || || ||||||| ||| | || ||||| || ||||||||||| | Sbjct: 40 acaaggagggcatcccaccggaccagcagaggttgatctttgcagggaagcagttggagg 99 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| |||| | |||||||||||||||||||| |||| Sbjct: 100 atggaagaacccttgctgattacaacattcagaaggagt 138
>emb|AJ223330.1|NTAJ3330 Nicotiana tabacum TUQG4 gene, complete CDS Length = 2096 Score = 63.9 bits (32), Expect = 2e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 36 atttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattca 91 ||||| || |||||||| || |||||||| || ||||||||||||||||||||||| Sbjct: 1213 attttcgccggaaagcaattagaagatggccgcacattagctgattacaacattca 1268
>gb|DQ420617.1| Anser anser ubiquitin C II mRNA, complete cds Length = 1199 Score = 63.9 bits (32), Expect = 2e-07 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 640 acaaggaaggcattcctcctgaccagcagaggctgatctttgctggcaagcagctggaag 699 Query: 61 atgggcg 67 ||||||| Sbjct: 700 atgggcg 706 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | ||||| ||||| |||||| |||||| Sbjct: 412 acaaggaaggcattcctcctgaccagcagaggttgattttcgctggcaagcagctggaag 471 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 ||||||| || | |||| |||||||| |||||||| Sbjct: 472 atgggcgcaccctgtctgactacaacatccagaaaga 508 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||||| || || ||||| |||||| |||||| Sbjct: 184 acaaggaaggcattcctcctgaccagcagaggctgatcttcgctggcaagcagctggaag 243 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 ||||||| || | |||| |||||||| |||||||| Sbjct: 244 atgggcgcaccctgtctgactacaacatccagaaaga 280
>gb|DQ420616.1| Anser anser ubiquitin C I mRNA, complete cds Length = 1191 Score = 63.9 bits (32), Expect = 2e-07 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 640 acaaggaaggcattcctcctgaccagcagaggctgatctttgctggcaagcagctggaag 699 Query: 61 atgggcg 67 ||||||| Sbjct: 700 atgggcg 706 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | ||||| ||||| |||||| |||||| Sbjct: 868 acaaggaaggcattcctcctgaccagcagaggttgattttcgctggcaagcagctggaag 927 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 ||||||| || | |||| |||||||| |||||||| Sbjct: 928 atgggcgcaccctgtctgactacaacatccagaaaga 964 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | ||||| ||||| |||||| |||||| Sbjct: 412 acaaggaaggcattcctcctgaccagcagaggttgattttcgctggcaagcagctggaag 471 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 ||||||| || | |||| |||||||| |||||||| Sbjct: 472 atgggcgcaccctgtctgactacaacatccagaaaga 508 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||||| || || ||||| |||||| |||||| Sbjct: 184 acaaggaaggcattcctcctgaccagcagaggctgatcttcgctggcaagcagctggaag 243 Query: 61 atgggcgaacattagctgattacaacattcagaaaga 97 ||||||| || | |||| |||||||| |||||||| Sbjct: 244 atgggcgcaccctgtctgactacaacatccagaaaga 280
>emb|CR621420.1| full-length cDNA clone CS0DE004YK08 of Placenta of Homo sapiens (human) Length = 2162 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 833 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 892 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 893 atgggcgcaccctgtctgactacaacatccagaaagagt 931 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 377 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 436 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 437 atgggcgcaccctgtctgactacaacatccagaaagagt 475 Score = 60.0 bits (30), Expect = 3e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||| | Sbjct: 170 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgact 229 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 230 acaacatccagaaagagt 247
>dbj|AK097415.1| Homo sapiens cDNA FLJ40096 fis, clone TESTI2004080, highly similar to Homo sapiens mRNA for polyubiquitin UbC Length = 1864 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 747 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 806 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 807 atgggcgcaccctgtctgactacaacatccagaaagagt 845 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 291 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 350 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 351 atgggcgcaccctgtctgactacaacatccagaaagagt 389
>dbj|AK056939.1| Homo sapiens cDNA FLJ32377 fis, clone SKMUS1000014, highly similar to Polyubiquitin 9 Length = 1300 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 756 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 815 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 816 atgggcgcaccctgtctgactacaacatccagaaagagt 854 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 300 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 359 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 360 atgggcgcaccctgtctgactacaacatccagaaagagt 398 Score = 58.0 bits (29), Expect = 1e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||| | Sbjct: 183 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgact 242 Query: 82 acaacattcagaaagag 98 ||||||| ||||||||| Sbjct: 243 acaacatccagaaagag 259
>gb|DQ413200.1| Acyrthosiphon pisum isolate WHAP0037 putative ribosomal protein S27A mRNA, complete cds Length = 453 Score = 63.9 bits (32), Expect = 2e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 36 atttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaa 95 ||||||||||| ||||| |||||||||||||| || || |||||||||| || |||||| Sbjct: 130 atttttgctggtaagcaattggaagatgggcgcacgctatctgattacaatatacagaaa 189 Query: 96 gagt 99 |||| Sbjct: 190 gagt 193
>ref|NM_021009.3| Homo sapiens ubiquitin C (UBC), mRNA Length = 2418 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 1057 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 1116 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1117 atgggcgcaccctgtctgactacaacatccagaaagagt 1155 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 601 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 660 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 661 atgggcgcaccctgtctgactacaacatccagaaagagt 699 Score = 60.0 bits (30), Expect = 3e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||| | Sbjct: 394 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgact 453 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 454 acaacatccagaaagagt 471
>gb|AC126309.8| Homo sapiens 12 BAC RP11-592O2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 121984 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Minus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 105786 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 105727 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 105726 atgggcgcaccctgtctgactacaacatccagaaagagt 105688 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Minus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 105330 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 105271 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 105270 atgggcgcaccctgtctgactacaacatccagaaagagt 105232 Score = 60.0 bits (30), Expect = 3e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||| | Sbjct: 105993 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgact 105934 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 105933 acaacatccagaaagagt 105916
>gb|AY228476.1| Anas platyrhynchos polyubiquitin gene, partial cds Length = 345 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||||||||| ||||||| ||| | || |||||||| |||||| |||||| Sbjct: 203 acaaagagggcattccccctgaccagcagaggttgatctttgctggcaagcagctggaag 262 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | |||| |||||||| |||||||||| Sbjct: 263 atggtcgcaccctgtctgactacaacatccagaaagagt 301
>gb|AF268174.1|AF268174 Bovine viral diarrhea virus type 2 strain BVDV2-Ms St T4529c polyprotein gene, partial cds Length = 1908 Score = 63.9 bits (32), Expect = 2e-07 Identities = 76/91 (83%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgggcga 68 ||||||||||| ||||||| ||||| || ||||| || |||||| |||||||||| || Sbjct: 937 ggcattccccctgaccagcagaggctcatctttgccggcaagcagctggaagatggccgc 996 Query: 69 acattagctgattacaacattcagaaagagt 99 || | ||||||||||||| |||||||||| Sbjct: 997 actctttctgattacaacatccagaaagagt 1027 Score = 54.0 bits (27), Expect = 2e-04 Identities = 53/62 (85%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||||||||||||||| ||||||| ||||| || || || ||||||||| | |||||| Sbjct: 1159 aaggagggcattccccctgaccagcagaggctcatcttggccggaaagcagcttgaagat 1218 Query: 63 gg 64 || Sbjct: 1219 gg 1220 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 ctgattacaacattcagaaagagt 99 ||||||||||||| |||||||||| Sbjct: 1460 ctgattacaacatccagaaagagt 1483
>gb|BC093445.1| Homo sapiens cDNA clone IMAGE:5284302, partial cds Length = 2207 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 846 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 905 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 906 atgggcgcaccctgtctgactacaacatccagaaagagt 944 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 390 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 449 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 450 atgggcgcaccctgtctgactacaacatccagaaagagt 488 Score = 60.0 bits (30), Expect = 3e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||| | Sbjct: 183 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgact 242 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 243 acaacatccagaaagagt 260
>emb|X02650.1|GGUBIQ Chicken mRNA for ubiquitin Length = 598 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||| ||||| |||| |||||| | || |||||||| |||||| |||||| Sbjct: 107 acaaggaaggcatcccccctgaccaacaaaggttgatctttgctggcaagcagctggaag 166 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 167 atgggcgcaccctgtctgactacaacatccagaaagagt 205 Score = 42.1 bits (21), Expect = 0.68 Identities = 47/56 (83%) Strand = Plus / Plus Query: 9 ggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatgg 64 ||||||||||| | || |||||| ||||||||||| |||||| |||||||||| Sbjct: 343 ggcattccccctgatcaacaaaggtggatttttgctggcaagcagctggaagatgg 398
>dbj|AB089616.1| Pongo pygmaeus UbC gene for polyubiquitin C, complete cds Length = 2286 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||| || | ||||||||| | || ||||| ||||||||| |||||| Sbjct: 1007 acaaggagggcattcctcctgatcagcaaaggttgatctttgcgggaaagcagctggaag 1066 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | |||| |||||||| |||||||||| Sbjct: 1067 atggacgcaccctctctgactacaacatccagaaagagt 1105 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 551 acaaggaaggcattcctcctgaccagcagaggttgatctttgcgggaaagcagctggaag 610 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | ||||||||||||| |||||||||| Sbjct: 611 atggtcgcaccctgtctgattacaacatccagaaagagt 649 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 323 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 382 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | ||||||||||||| |||||||||| Sbjct: 383 atggtcgcaccctgtctgattacaacatccagaaagagt 421 Score = 56.0 bits (28), Expect = 5e-05 Identities = 81/99 (81%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||| || ||||||| ||| | || ||||| ||||| ||| |||||| Sbjct: 779 acaaggagggcattcctcctgaccagcagaggttgatctttgccggaaaacagctggaag 838 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | |||| |||||||| |||||||||| Sbjct: 839 atggtcgcaccctgtctgactacaacatccagaaagagt 877 Score = 52.0 bits (26), Expect = 7e-04 Identities = 65/78 (83%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||| | || ||||| ||||||||| |||||||||| || || | |||||| Sbjct: 116 accagcagaggttgatctttgccggaaagcagctggaagatggtcgcaccctgtctgatt 175 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 176 acaacatccagaaagagt 193
>dbj|AB089613.1| Homo sapiens UbC gene for polyubiquitin C, complete cds Length = 2058 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 779 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 838 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 839 atgggcgcaccctgtctgactacaacatccagaaagagt 877 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 323 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 382 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 383 atgggcgcaccctgtctgactacaacatccagaaagagt 421 Score = 60.0 bits (30), Expect = 3e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||| | Sbjct: 116 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgact 175 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 176 acaacatccagaaagagt 193
>dbj|AK098827.1| Homo sapiens cDNA FLJ25961 fis, clone TST09043, highly similar to Polyubiquitin UbC Length = 2191 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 846 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 905 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 906 atgggcgcaccctgtctgactacaacatccagaaagagt 944 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 390 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 449 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 450 atgggcgcaccctgtctgactacaacatccagaaagagt 488 Score = 60.0 bits (30), Expect = 3e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||| | Sbjct: 183 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgact 242 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 243 acaacatccagaaagagt 260
>dbj|AK026846.1| Homo sapiens cDNA: FLJ23193 fis, clone REC00306, highly similar to AF052164 Homo sapiens clone 24683 mRNA sequence Length = 1082 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 402 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 461 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 462 atgggcgcaccctgtctgactacaacatccagaaagagt 500 Score = 60.0 bits (30), Expect = 3e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||| | Sbjct: 195 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgact 254 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 255 acaacatccagaaagagt 272
>dbj|AK129749.1| Homo sapiens cDNA FLJ26238 fis, clone CBR05440, highly similar to Rattus norvegicus ubiquitin C (Ubc) Length = 2191 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 846 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 905 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 906 atgggcgcaccctgtctgactacaacatccagaaagagt 944 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 390 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 449 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 450 atgggcgcaccctgtctgactacaacatccagaaagagt 488 Score = 60.0 bits (30), Expect = 3e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||| | Sbjct: 183 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgact 242 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 243 acaacatccagaaagagt 260
>dbj|AB003730.1| Homo sapiens gene for polyubiquitin, complete cds Length = 2291 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 1203 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 1262 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1263 atgggcgcaccctgtctgactacaacatccagaaagagt 1301 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 747 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 806 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 807 atgggcgcaccctgtctgactacaacatccagaaagagt 845 Score = 60.0 bits (30), Expect = 3e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||| | Sbjct: 540 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgact 599 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 600 acaacatccagaaagagt 617
>gb|AF052164.1|AF052164 Homo sapiens clone 24683 mRNA sequence Length = 1168 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 20 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 79 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 80 atgggcgcaccctgtctgactacaacatccagaaagagt 118
>dbj|AB209782.1| Homo sapiens mRNA for ubiquitin C variant protein Length = 3996 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 2651 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 2710 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 2711 atgggcgcaccctgtctgactacaacatccagaaagagt 2749 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 827 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 886 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 887 atgggcgcaccctgtctgactacaacatccagaaagagt 925 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 371 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 430 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 431 atgggcgcaccctgtctgactacaacatccagaaagagt 469 Score = 60.0 bits (30), Expect = 3e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||| | Sbjct: 164 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgact 223 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 224 acaacatccagaaagagt 241 Score = 56.0 bits (28), Expect = 5e-05 Identities = 81/99 (81%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||| || || ||||||| ||| | || ||||||||||| ||| |||||| Sbjct: 1511 acaaggaaggcatccctcctgaccagcagaggttgatctttgctggaaaacagctggaag 1570 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1571 atgggcgcaccctgtctgactacaacatccagaaagagt 1609 Score = 42.1 bits (21), Expect = 0.68 Identities = 51/61 (83%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagag 98 ||||||||||| ||| |||||||||| || || | |||| |||||||| ||||||||| Sbjct: 1321 tttgctggaaaacagctggaagatggtcgcaccctgtctgactacaacatccagaaagag 1380 Query: 99 t 99 | Sbjct: 1381 t 1381
>gb|U77939.1|PVU77939 Phaseolus vulgaris ubiquitin-like protein mRNA, complete cds Length = 1399 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||| || || ||||||| ||| | || ||||| || ||||||||||| | Sbjct: 1134 acaaggagggcatcccaccggaccagcagaggttgatctttgcagggaagcagttggagg 1193 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| |||| | |||||||||||||||||||| |||| Sbjct: 1194 atggaagaacccttgctgattacaacattcagaaggagt 1232 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| |||||||| ||||||| ||| | || || |||||||||||| |||| | Sbjct: 450 acaaggagggaattcccccggaccagcagaggttgatcttcgctggaaagcagctggagg 509 Query: 61 atgggcg 67 ||||||| Sbjct: 510 atgggcg 516
>gb|M26880.1|HUMUBI13 Human ubiquitin mRNA, complete cds Length = 2309 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 1826 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 1885 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 1886 atgggcggaccctgtctgactacaacatccagaaagagt 1924 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 458 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 517 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 518 atgggcgcaccctgtctgactacaacatccagaaagagt 556 Score = 58.0 bits (29), Expect = 1e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 39 tttgctggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagag 98 ||||||||||| ||| ||||||||||||| || | |||| |||||||||||||||||| Sbjct: 1636 tttgctggaaaacagctggaagatgggcgcaccctgtctgactacaacattcagaaagag 1695 Query: 99 t 99 | Sbjct: 1696 t 1696
>gb|M18159.1|PIGUBP Pig poly-ubiquitin mRNA, 3' end Length = 832 Score = 63.9 bits (32), Expect = 2e-07 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||| |||||| ||||||| ||||| || ||||| || |||||| |||||| Sbjct: 629 acaaggaaggcatccccccagaccagcagaggctgatctttgccgggaagcagctggaag 688 Query: 61 atgggcg 67 ||||||| Sbjct: 689 atgggcg 695 Score = 63.9 bits (32), Expect = 2e-07 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||| |||||| ||||||| ||||| || ||||| || |||||| |||||| Sbjct: 401 acaaggaaggcatccccccagaccagcagaggctgatctttgccgggaagcagctggaag 460 Query: 61 atgggcg 67 ||||||| Sbjct: 461 atgggcg 467 Score = 63.9 bits (32), Expect = 2e-07 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||| |||||| ||||||| ||||| || ||||| || |||||| |||||| Sbjct: 173 acaaggaaggcatccccccagaccagcagaggctgatctttgccgggaagcagctggaag 232 Query: 61 atgggcg 67 ||||||| Sbjct: 233 atgggcg 239
>gb|M62428.1|BOVPOUB Bovine polyubiquitin mRNA, 3' end, clone rpub1 Length = 789 Score = 63.9 bits (32), Expect = 2e-07 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| |||||||| |||||| ||||||| |||||||| ||||| || || ||| |||||| Sbjct: 128 acaaagagggcatccccccagaccagcagaggctaatctttgccgggaaacagctggaag 187 Query: 61 atgggcg 67 ||||||| Sbjct: 188 atgggcg 194
>dbj|D83208.1|GPIUBIY Cavia cobaya mRNA for ubiquitin, complete cds Length = 1028 Score = 63.9 bits (32), Expect = 2e-07 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||| ||||| ||||||| ||||| || || ||||| |||||| |||||| Sbjct: 597 acaaggagggcatcccccctgaccagcagaggctgatcttcgctggcaagcagctggaag 656 Query: 61 atgggcg 67 ||||||| Sbjct: 657 atgggcg 663 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||| ||||| ||||||| ||||| || || ||||| |||||| |||||| Sbjct: 825 acaaggagggcatcccccctgaccagcagaggctgatcttcgctggcaagcagctggaag 884 Query: 61 atgggcg 67 | ||||| Sbjct: 885 acgggcg 891 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||| ||||| ||||||| ||||| || || ||||| |||||| |||||| Sbjct: 369 acaaggagggcatcccccctgaccagcagaggctgatcttcgctggcaagcagctggaag 428 Query: 61 atgggcg 67 | ||||| Sbjct: 429 acgggcg 435 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||| ||||| ||||||| ||||| || || ||||| |||||| |||||| Sbjct: 141 acaaggagggcatcccccctgaccagcagaggctgatcttcgctggcaagcagctggaag 200 Query: 61 atgggcg 67 | ||||| Sbjct: 201 acgggcg 207
>dbj|AB035543.1| Microsporum canis mRNA for ubiquitin, complete cds Length = 740 Score = 63.9 bits (32), Expect = 2e-07 Identities = 61/71 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||||||||| || ||| |||||||| | || || ||||||||||||||| | |||| Sbjct: 323 acaaggagggcatccctccagaccagcaacgtctcatctttgctggaaagcagctcgaag 382 Query: 61 atgggcgaaca 71 |||| |||||| Sbjct: 383 atggtcgaaca 393
>dbj|D63791.1|HUMPOLYUBI Human UbC gene for polyubiquitin, exon1-2, partial cds Length = 6605 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 5551 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 5610 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 5611 atgggcgcaccctgtctgactacaacatccagaaagagt 5649 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 5095 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 5154 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 5155 atgggcgcaccctgtctgactacaacatccagaaagagt 5193 Score = 60.0 bits (30), Expect = 3e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||| | Sbjct: 4888 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgact 4947 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 4948 acaacatccagaaagagt 4965 Score = 56.0 bits (28), Expect = 5e-05 Identities = 81/99 (81%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||||||||| || ||||||| ||| | || ||||| ||||| ||| |||||| Sbjct: 5779 acaaggagggcattcctcctgaccagcagaggttgatctttgccggaaaacagctggaag 5838 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | |||| |||||||| |||||||||| Sbjct: 5839 atggtcgtaccctgtctgactacaacatccagaaagagt 5877
>dbj|AB009010.1| Homo sapiens mRNA for polyubiquitin UbC, complete cds Length = 2192 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 847 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 906 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 907 atgggcgcaccctgtctgactacaacatccagaaagagt 945 Score = 63.9 bits (32), Expect = 2e-07 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || ||||||| ||| | || ||||| ||||||||| |||||| Sbjct: 391 acaaggaaggcattcctcctgaccagcagaggttgatctttgccggaaagcagctggaag 450 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 ||||||| || | |||| |||||||| |||||||||| Sbjct: 451 atgggcgcaccctgtctgactacaacatccagaaagagt 489 Score = 60.0 bits (30), Expect = 3e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 22 accagcaaaggctaatttttgctggaaagcagttggaagatgggcgaacattagctgatt 81 ||||||| ||||| || ||||||||||| ||| ||||||||||||| || | |||| | Sbjct: 184 accagcagaggctgatctttgctggaaaacagctggaagatgggcgcaccctgtctgact 243 Query: 82 acaacattcagaaagagt 99 ||||||| |||||||||| Sbjct: 244 acaacatccagaaagagt 261
>ref|NM_102190.2| Arabidopsis thaliana protein binding / structural constituent of ribosome AT1G23410 mRNA, complete cds Length = 608 Score = 61.9 bits (31), Expect = 7e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 45 ggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagagt 99 ||||| || ||||||||||| ||||| |||||||||||||||| |||||||||| Sbjct: 155 ggaaaacaattggaagatggaagaacactagctgattacaacatccagaaagagt 209
>gb|DQ216244.1| Taeniopygia guttata clone 0058P0008C01 ubiquitin C variant 4-like mRNA, complete sequence Length = 713 Score = 61.9 bits (31), Expect = 7e-07 Identities = 60/70 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||| || || ||||||| ||||| ||||| ||||| |||||| |||||| Sbjct: 507 acaaggaaggcatccctcctgaccagcagaggctgattttcgctggcaagcagctggaag 566 Query: 61 atgggcgaac 70 |||||||||| Sbjct: 567 atgggcgaac 576 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||| || || ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 279 acaaggaaggcatccctcctgaccagcagaggctgatctttgctggcaagcagctggaag 338 Query: 61 atgggcg 67 ||||||| Sbjct: 339 atgggcg 345 Score = 48.1 bits (24), Expect = 0.011 Identities = 39/44 (88%) Strand = Plus / Plus Query: 24 cagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||| ||||| ||||| ||||| |||||| ||||||||||||| Sbjct: 74 cagcagaggctgattttcgctggcaagcagctggaagatgggcg 117
>gb|DQ216243.1| Taeniopygia guttata clone 0058P0010H02 ubiquitin C variant 4-like mRNA, complete sequence Length = 806 Score = 61.9 bits (31), Expect = 7e-07 Identities = 60/70 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||| || || ||||||| ||||| ||||| ||||| |||||| |||||| Sbjct: 581 acaaggaaggcatccctcctgaccagcagaggctgattttcgctggcaagcagctggaag 640 Query: 61 atgggcgaac 70 |||||||||| Sbjct: 641 atgggcgaac 650 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||| || || ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 352 acaaggaaggcatccctcctgaccagcagaggctgatctttgctggcaagcagctggaag 411 Query: 61 atgggcg 67 ||||||| Sbjct: 412 atgggcg 418 Score = 48.1 bits (24), Expect = 0.011 Identities = 39/44 (88%) Strand = Plus / Plus Query: 24 cagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||| ||||| ||||| ||||| |||||| ||||||||||||| Sbjct: 147 cagcagaggctgattttcgctggcaagcagctggaagatgggcg 190
>gb|DQ216242.1| Taeniopygia guttata clone 0058P0038G08 ubiquitin C variant 4-like mRNA, complete sequence Length = 806 Score = 61.9 bits (31), Expect = 7e-07 Identities = 60/70 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||| || || ||||||| ||||| ||||| ||||| |||||| |||||| Sbjct: 568 acaaggaaggcatccctcctgaccagcagaggctgattttcgctggcaagcagctggaag 627 Query: 61 atgggcgaac 70 |||||||||| Sbjct: 628 atgggcgaac 637 Score = 56.0 bits (28), Expect = 5e-05 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| ||||| || || ||||||| ||||| || |||||||| |||||| |||||| Sbjct: 340 acaaggaaggcatccctcctgaccagcagaggctgatctttgctggcaagcagctggaag 399 Query: 61 atgggcg 67 ||||||| Sbjct: 400 atgggcg 406 Score = 48.1 bits (24), Expect = 0.011 Identities = 39/44 (88%) Strand = Plus / Plus Query: 24 cagcaaaggctaatttttgctggaaagcagttggaagatgggcg 67 ||||| ||||| ||||| ||||| |||||| ||||||||||||| Sbjct: 135 cagcagaggctgattttcgctggcaagcagctggaagatgggcg 178
>gb|BC066197.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:76690 IMAGE:6435236), complete cds Length = 1214 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 456 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 515 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 516 cgcaccctccctgattacaacatccagaaagagt 549 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| | |||||||| Sbjct: 912 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctagaagatggc 971 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 972 cgcactctctctgattacaacatccagaaagagt 1005 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 684 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 743 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 744 cgcaccctctctgattacaacatccagaaggagt 777 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 228 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 287 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 288 cgcaccctctctgattacaacatccagaaggagt 321
>gb|AC123736.8| Mus musculus chromosome 3, clone RP23-478I18, complete sequence Length = 189063 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 173577 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 173636 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 173637 cgcaccctctctgattacaacatccagaaagagt 173670
>gb|BC070919.1| Rattus norvegicus polyubiquitin, mRNA (cDNA clone MGC:91487 IMAGE:7104905), complete cds Length = 1170 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 856 gagggcatcccccctgaccagcagaggctcatctttgccggcaagcagctggaagatggc 915 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 916 cgcaccctctctgattacaacatccagaaagagt 949 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 400 gagggcatcccccctgaccagcagaggctcatctttgccggcaagcagctggaagatggc 459 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 460 cgcaccctctctgattacaacatccagaaagagt 493
>gb|BC060312.1| Rattus norvegicus polyubiquitin, mRNA (cDNA clone MGC:72686 IMAGE:6919609), complete cds Length = 1199 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 886 gagggcatcccccctgaccagcagaggctcatctttgccggcaagcagctggaagatggc 945 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 946 cgcaccctctctgattacaacatccagaaagagt 979 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 430 gagggcatcccccctgaccagcagaggctcatctttgccggcaagcagctggaagatggc 489 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 490 cgcaccctctctgattacaacatccagaaagagt 523 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 658 gagggcatcccccctgaccagcagaggctcatctttgccggcaagcagctggaagatggc 717 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 718 cgcaccctctctgattacaacatccagaaggagt 751
>gb|BC019850.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:29922 IMAGE:5123849), complete cds Length = 1146 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 851 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 910 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 911 cgcactctctctgattacaacatccagaaagagt 944 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 167 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 226 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 227 cgcaccctctctgattacaacatccagaaagagt 260 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 623 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 682 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 683 cgcaccctctctgattacaacatccagaaggagt 716 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 395 gagggcatcccccctgaccagcataggctgatctttgccggcaagcagctggaagatggc 454 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 455 cgcaccctctctgattacaacatccagaaggagt 488
>ref|NM_011664.2| Mus musculus ubiquitin B (Ubb), mRNA Length = 1167 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 427 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 486 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 487 cgcaccctctctgattacaacatccagaaagagt 520 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| | |||||||| Sbjct: 883 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctagaagatggc 942 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 943 cgcactctctctgattacaacatccagaaagagt 976 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 655 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 714 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 715 cgcaccctctctgattacaacatccagaaggagt 748 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 199 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 258 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 259 cgcaccctctctgattacaacatccagaaggagt 292
>gb|AY522603.1| Oreochromis mossambicus ubiquitin precursor-like mRNA, partial sequence Length = 745 Score = 61.9 bits (31), Expect = 7e-07 Identities = 54/62 (87%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||||||||||||||| ||||||| | ||| || |||||||| |||||| |||||||| Sbjct: 164 aaggagggcattccccctgaccagcagatgctgatatttgctggcaagcagctggaagat 223 Query: 63 gg 64 || Sbjct: 224 gg 225 Score = 40.1 bits (20), Expect = 2.7 Identities = 37/43 (86%) Strand = Plus / Plus Query: 4 aggagggcattcccccanaccagcaaaggctaatttttgctgg 46 |||| ||||||||||| ||||||| ||||| || |||||||| Sbjct: 620 aggaaggcattccccctgaccagcataggctgatctttgctgg 662
>ref|XR_004579.1| PREDICTED: Mus musculus gene model 1821, (NCBI) (Gm1821), misc RNA Length = 977 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 433 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 492 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 493 cgcaccctctctgattacaacatccagaaagagt 526 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| | |||||||| Sbjct: 661 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctagaagatggc 720 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 721 cgcactctctctgattacaacatccagaaagagt 754 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 205 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 264 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 265 cgcaccctctctgattacaacatccagaaggagt 298
>ref|XM_974638.1| PREDICTED: Mus musculus similar to polyubiquitin (LOC669363), mRNA Length = 494 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 199 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 258 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 259 cgcaccctctctgattacaacatccagaaagagt 292
>ref|XM_992219.1| PREDICTED: Mus musculus similar to polyubiquitin (LOC667759), mRNA Length = 493 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 199 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 258 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 259 cgcaccctctctgattacaacatccagaaagagt 292
>ref|XR_005158.1| PREDICTED: Mus musculus ubiquitin pseudogene (LOC218963), misc RNA Length = 493 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 199 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 258 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 259 cgcaccctctctgattacaacatccagaaagagt 292
>gb|AY489136.1| Capsicum annuum polyubiquitin 4.4 mRNA, complete cds Length = 605 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||||||||| ||||||||| | ||||| ||| | ||||| ||||| |||||| | || | Sbjct: 50 acaaggagggtattcccccagatcagcagaggttgattttcgctggcaagcagctcgagg 109 Query: 61 atgggcgaacattagctgattacaacattcagaa 94 ||||||| || | ||||| |||||||||||||| Sbjct: 110 atgggcgtacccttgctgactacaacattcagaa 143
>gb|AC137844.8| Mus musculus, clone RP23-415L22, complete sequence Length = 188189 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Minus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 143908 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 143849 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 143848 cgcaccctctctgattacaacatccagaaagagt 143815
>gb|BC100341.1| Mus musculus ubiquitin B, mRNA (cDNA clone MGC:117670 IMAGE:30787432), complete cds Length = 1145 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 381 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 440 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 441 cgcaccctctctgattacaacatccagaaagagt 474 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| | |||||||| Sbjct: 837 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctagaagatggc 896 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 897 cgcactctctctgattacaacatccagaaagagt 930 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 609 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 668 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 669 cgcaccctctctgattacaacatccagaaggagt 702 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 153 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 212 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 213 cgcaccctctctgattacaacatccagaaggagt 246
>emb|AL596181.10| Mouse DNA sequence from clone RP23-234K24 on chromosome 11 Contains nine novel genes, the Trpv2 for member 2 transient receptor potential cation channel subfamily V, the Ubb gene for ubiquitin B, the 3' end of the gene for the ortholog of human and rat phosphatidylinositol glycan class L PIGL and five CpG islands, complete sequence Length = 195339 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Minus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 121678 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 121619 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 121618 cgcaccctctctgattacaacatccagaaagagt 121585 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Minus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 121906 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 121847 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 121846 cgcaccctctctgattacaacatccagaaggagt 121813 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Minus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 121450 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 121391 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 121390 cgcaccctctctgattacaacatccagaaggagt 121357 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Minus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| | |||||||| Sbjct: 121222 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctagaagatggc 121163 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 121162 cgcactctctctgattacaacatccagaaagagt 121129
>gb|AF061807.1| Elaeagnus umbellata polyubiquitin mRNA, complete cds Length = 1642 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| ||||| || |||||| | ||||||||| | ||||||||||| ||||| | || | Sbjct: 835 acaaagagggtatccccccagatcagcaaaggttgatttttgctggtaagcaactcgagg 894 Query: 61 atgggcgaacattagctgattacaacattcagaa 94 |||| ||||| |||||||| |||||||| ||||| Sbjct: 895 atggccgaactttagctgactacaacatccagaa 928 Score = 60.0 bits (30), Expect = 3e-06 Identities = 56/65 (86%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 ||||||| |||||||| || | || || |||||||||||||||||||||||| |||| | Sbjct: 1291 acaaggaaggcattcctcctgatcaacagaggctaatttttgctggaaagcagctggagg 1350 Query: 61 atggg 65 ||||| Sbjct: 1351 atggg 1355 Score = 56.0 bits (28), Expect = 5e-05 Identities = 81/99 (81%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| ||||| || |||||| |||||||||| | || || ||||| |||||| | |||| Sbjct: 607 acaaagagggtatccccccagaccagcaaagattgatcttcgctggcaagcagcttgaag 666 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | |||||||||||||||||||| |||| Sbjct: 667 atggtcgcacccttgctgattacaacattcagaaggagt 705 Score = 48.1 bits (24), Expect = 0.011 Identities = 80/99 (80%) Strand = Plus / Plus Query: 1 acaaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaag 60 |||| ||||| || || ||| ||||||||||| | || ||||| || |||||| | |||| Sbjct: 379 acaaagagggtatccctccagaccagcaaaggttgatctttgccggcaagcagcttgaag 438 Query: 61 atgggcgaacattagctgattacaacattcagaaagagt 99 |||| || || | || ||||||||||||||||| |||| Sbjct: 439 atggtcgcacccttgcagattacaacattcagaaggagt 477
>dbj|AK132747.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4922505B09 product:ubiquitin B, full insert sequence Length = 1166 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 427 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 486 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 487 cgcaccctctctgattacaacatccagaaagagt 520 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| | |||||||| Sbjct: 883 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctagaagatggc 942 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 943 cgcactctctctgattacaacatccagaaagagt 976 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 655 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 714 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 715 cgcaccctctctgattacaacatccagaaggagt 748 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 199 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 258 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 259 cgcaccctctctgattacaacatccagaaggagt 292
>gb|BT024763.1| Arabidopsis thaliana At1g23410 mRNA, complete cds Length = 471 Score = 61.9 bits (31), Expect = 7e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 45 ggaaagcagttggaagatgggcgaacattagctgattacaacattcagaaagagt 99 ||||| || ||||||||||| ||||| |||||||||||||||| |||||||||| Sbjct: 139 ggaaaacaattggaagatggaagaacactagctgattacaacatccagaaagagt 193
>dbj|AK165313.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430012C16 product:ubiquitin B, full insert sequence Length = 1159 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 426 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 485 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 486 cgcaccctctctgattacaacatccagaaagagt 519 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| | |||||||| Sbjct: 882 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctagaagatggc 941 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 942 cgcactctctctgattacaacatccagaaagagt 975 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 654 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 713 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 714 cgcaccctctctgattacaacatccagaaggagt 747
>dbj|AK013873.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3000008M07 product:ubiquitin B, full insert sequence Length = 1162 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 425 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 484 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 485 cgcaccctctctgattacaacatccagaaagagt 518 Score = 60.0 bits (30), Expect = 3e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||||||||| ||||| ||||||| ||||| || ||||| || |||||| | |||||| Sbjct: 878 aaggagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctagaagat 937 Query: 63 gggcgaacattagctgattacaacattcagaaagagt 99 || || || | ||||||||||||| |||||||||| Sbjct: 938 ggccgcactctctctgattacaacatccagaaagagt 974 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 653 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 712 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 713 cgcaccctctctgattacaacatccagaaggagt 746
>dbj|AK010625.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410036G24 product:ubiquitin B, full insert sequence Length = 1160 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 427 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 486 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 487 cgcaccctctctgattacaacatccagaaagagt 520 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| | |||||||| Sbjct: 883 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctagaagatggc 942 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 943 cgcactctctctgattacaacatccagaaagagt 976 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 655 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 714 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 715 cgcaccctctctgattacaacatccagaaggagt 748 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 199 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 258 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 259 cgcaccctctctgattacaacatccagaaggagt 292
>dbj|AK010413.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410005G06 product:polyubiquitin 4, full insert sequence Length = 1165 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 428 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 487 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 488 cgcaccctctctgattacaacatccagaaagagt 521 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| | |||||||| Sbjct: 884 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctagaagatggc 943 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 944 cgcactctctctgattacaacatccagaaagagt 977 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 656 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 715 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 716 cgcaccctctctgattacaacatccagaaggagt 749 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 200 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 259 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 260 cgcaccctctctgattacaacatccagaaggagt 293
>dbj|AK088453.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430018A04 product:ubiquitin polyprotein (heat shock related) (fragment) homolog [Gallus gallus], full insert sequence Length = 704 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 428 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 487 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 488 cgcactctctctgattacaacatccagaaagagt 521 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||| | || ||||| || |||||| |||||||||| Sbjct: 200 gagggcatcccccctgaccagcagagggtgatctttgccggcaagcagctggaagatggc 259 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 260 cgcaccctctctgattacaacatccagaaagagt 293
>dbj|AK013027.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810407D23 product:ubiquitin B, full insert sequence Length = 1167 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 427 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 486 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 487 cgcaccctctctgattacaacatccagaaagagt 520 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| | |||||||| Sbjct: 883 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctagaagatggc 942 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 943 cgcactctctctgattacaacatccagaaagagt 976 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 655 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 714 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 715 cgcaccctctctgattacaacatccagaaggagt 748 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 199 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 258 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 259 cgcaccctctctgattacaacatccagaaggagt 292
>ref|NR_002856.1| Mus musculus ubiquitin pseudogene (LOC218963) on chromosome 3 Length = 975 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 217 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 276 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 277 cgcactctctctgattacaacatccagaaagagt 310
>dbj|AK012443.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700055N04 product:ubiquitin B, full insert sequence Length = 1166 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 428 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 487 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 488 cgcaccctctctgattacaacatccagaaagagt 521 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| | |||||||| Sbjct: 884 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctagaagatggc 943 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 944 cgcactctctctgattacaacatccagaaagagt 977 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 656 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 715 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 716 cgcaccctctctgattacaacatccagaaggagt 749 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 200 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 259 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 260 cgcaccctctctgattacaacatccagaaggagt 293
>dbj|AK007273.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700124N12 product:ubiquitin B, full insert sequence Length = 1195 Score = 61.9 bits (31), Expect = 7e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 458 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 517 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 518 cgcaccctctctgattacaacatccagaaagagt 551 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| | |||||||| Sbjct: 914 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctagaagatggc 973 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| |||||||||| Sbjct: 974 cgcactctctctgattacaacatccagaaagagt 1007 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 686 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 745 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 746 cgcaccctctctgattacaacatccagaaggagt 779 Score = 54.0 bits (27), Expect = 2e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 6 gagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagatggg 65 |||||||| ||||| ||||||| ||||| || ||||| || |||||| |||||||||| Sbjct: 230 gagggcatcccccctgaccagcagaggctgatctttgccggcaagcagctggaagatggc 289 Query: 66 cgaacattagctgattacaacattcagaaagagt 99 || || | ||||||||||||| ||||| |||| Sbjct: 290 cgcaccctctctgattacaacatccagaaggagt 323
>gb|AY737055.1| Oreochromis mossambicus clone Contig17 ubiquitin mRNA, partial cds Length = 547 Score = 61.9 bits (31), Expect = 7e-07 Identities = 54/62 (87%) Strand = Plus / Plus Query: 3 aaggagggcattcccccanaccagcaaaggctaatttttgctggaaagcagttggaagat 62 ||||| ||||||||||| ||||||| ||||| || |||||||| |||||| |||||||| Sbjct: 164 aaggaaggcattccccctgaccagcagaggctgatatttgctggcaagcagctggaagat 223 Query: 63 gg 64 || Sbjct: 224 gg 225
>gb|AY930681.1| Rhagoletis electromorpha isolate Relect12 locus P309 genomic sequence Length = 480 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 33 ctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattca 91 |||||||| || ||||| || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 139 ctaattttcgcaggaaaacaattggaagatgggcgaaccttagccgattacaatattca 197
>gb|AY930679.1| Rhagoletis electromorpha isolate Relect8 locus P309 genomic sequence Length = 480 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 33 ctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattca 91 |||||||| || ||||| || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 139 ctaattttcgcaggaaaacaattggaagatgggcgaaccttagccgattacaatattca 197
>gb|AY930676.1| Rhagoletis electromorpha isolate Relect3 locus P309 genomic sequence Length = 480 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 33 ctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattca 91 |||||||| || ||||| || ||||||||||||||||| ||||| |||||||| ||||| Sbjct: 139 ctaattttcgcaggaaaacaattggaagatgggcgaaccttagccgattacaatattca 197
>gb|AY930674.1| Rhagoletis pomonella isolate TX15 locus P309 genomic sequence Length = 479 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 33 ctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattca 91 |||||||| || |||||||| || |||||||||||||| ||||| |||||||| ||||| Sbjct: 139 ctaattttcgcaggaaagcaattagaagatgggcgaaccttagccgattacaatattca 197
>gb|AY930673.1| Rhagoletis pomonella isolate TX13 locus P309 genomic sequence Length = 479 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 33 ctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattca 91 |||||||| || |||||||| || |||||||||||||| ||||| |||||||| ||||| Sbjct: 139 ctaattttcgcaggaaagcaattagaagatgggcgaaccttagccgattacaatattca 197
>gb|AY930672.1| Rhagoletis pomonella isolate MIHaw10 locus P309 genomic sequence Length = 479 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 33 ctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattca 91 |||||||| || |||||||| || |||||||||||||| ||||| |||||||| ||||| Sbjct: 139 ctaattttcgcaggaaagcaattagaagatgggcgaaccttagccgattacaatattca 197
>gb|AY930671.1| Rhagoletis pomonella isolate MIHaw9 locus P309 genomic sequence Length = 479 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 33 ctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattca 91 |||||||| || |||||||| || |||||||||||||| ||||| |||||||| ||||| Sbjct: 139 ctaattttcgcaggaaagcaattagaagatgggcgaaccttagccgattacaatattca 197
>gb|AY930670.1| Rhagoletis pomonella isolate MIHaw8 locus P309 genomic sequence Length = 479 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 33 ctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattca 91 |||||||| || |||||||| || |||||||||||||| ||||| |||||||| ||||| Sbjct: 139 ctaattttcgcaggaaagcaattagaagatgggcgaaccttagccgattacaatattca 197
>gb|AY930669.1| Rhagoletis pomonella isolate MIHaw6 locus P309 genomic sequence Length = 479 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 33 ctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattca 91 |||||||| || |||||||| || |||||||||||||| ||||| |||||||| ||||| Sbjct: 139 ctaattttcgcaggaaagcaattagaagatgggcgaaccttagccgattacaatattca 197
>gb|AY930668.1| Rhagoletis pomonella isolate MIHaw5 locus P309 genomic sequence Length = 479 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 33 ctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattca 91 |||||||| || |||||||| || |||||||||||||| ||||| |||||||| ||||| Sbjct: 139 ctaattttcgcaggaaagcaattagaagatgggcgaaccttagccgattacaatattca 197
>gb|AY930667.1| Rhagoletis pomonella isolate MIHaw4 locus P309 genomic sequence Length = 479 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 33 ctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattca 91 |||||||| || |||||||| || |||||||||||||| ||||| |||||||| ||||| Sbjct: 139 ctaattttcgcaggaaagcaattagaagatgggcgaaccttagccgattacaatattca 197
>gb|AY930666.1| Rhagoletis pomonella isolate MIHaw3 locus P309 genomic sequence Length = 479 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 33 ctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattca 91 |||||||| || |||||||| || |||||||||||||| ||||| |||||||| ||||| Sbjct: 139 ctaattttcgcaggaaagcaattagaagatgggcgaaccttagccgattacaatattca 197
>gb|AY930658.1| Rhagoletis pomonella isolate NY12 locus P309 genomic sequence Length = 479 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 33 ctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattca 91 |||||||| || |||||||| || |||||||||||||| ||||| |||||||| ||||| Sbjct: 139 ctaattttcgcaggaaagcaattagaagatgggcgaaccttagccgattacaatattca 197
>gb|AY930657.1| Rhagoletis pomonella isolate NY6 locus P309 genomic sequence Length = 479 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 33 ctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattca 91 |||||||| || |||||||| || |||||||||||||| ||||| |||||||| ||||| Sbjct: 139 ctaattttcgcaggaaagcaattagaagatgggcgaaccttagccgattacaatattca 197
>gb|AY930656.1| Rhagoletis pomonella isolate NY5 locus P309 genomic sequence Length = 479 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 33 ctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattca 91 |||||||| || |||||||| || |||||||||||||| ||||| |||||||| ||||| Sbjct: 139 ctaattttcgcaggaaagcaattagaagatgggcgaaccttagccgattacaatattca 197
>gb|AY930655.1| Rhagoletis pomonella isolate NY2 locus P309 genomic sequence Length = 479 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 33 ctaatttttgctggaaagcagttggaagatgggcgaacattagctgattacaacattca 91 |||||||| || |||||||| || |||||||||||||| ||||| |||||||| ||||| Sbjct: 139 ctaattttcgcaggaaagcaattagaagatgggcgaaccttagccgattacaatattca 197 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,056,957 Number of Sequences: 3902068 Number of extensions: 2056957 Number of successful extensions: 107119 Number of sequences better than 10.0: 950 Number of HSP's better than 10.0 without gapping: 920 Number of HSP's successfully gapped in prelim test: 30 Number of HSP's that attempted gapping in prelim test: 104253 Number of HSP's gapped (non-prelim): 2790 length of query: 213 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 191 effective length of database: 17,147,199,772 effective search space: 3275115156452 effective search space used: 3275115156452 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)