>ECR1_METKA (Q8TYC0) Probable exosome complex RNA-binding protein 1|
          Length = 239

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = +3

Query: 114 EAEVRVPEVDILSLLDVPPGKMGRVIGRKGSSIMARERILQC 239
           +A  R+  +    ++++ P K+ RVIGRKGS I   +R+L C
Sbjct: 142 DAPTRLGRLQGGQVVEIDPVKVPRVIGRKGSMIKMLKRVLGC 183

>BAT3_HUMAN (P46379) Large proline-rich protein BAT3 (HLA-B-associated|
           transcript 3) (Protein G3)
          Length = 1132

 Score = 30.8 bits (68), Expect = 0.98
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = -1

Query: 223 SRAIIDDPFLPITRPIFPGGTSKSERISTSGTRTSASMSSGTVGRGGQ 80
           +R +I  P  P  RP  PGG   S  +  +G  T+AS++    G  GQ
Sbjct: 500 TRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQ 547

>SCNAA_CHICK (Q92075) Amiloride-sensitive sodium channel alpha-subunit|
           (Epithelial Na+ channel alpha subunit) (Alpha ENaC)
           (Nonvoltage-gated sodium channel 1 alpha subunit)
           (SCNEA) (Alpha NaCH)
          Length = 637

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +3

Query: 36  LYCRCFCINDNQQADW-PPLPTVPDDIEAEVRVPEVDILSLLDVPPG 173
           LY  C+  NDN  + W   LP + + +   VR  + D + LL    G
Sbjct: 288 LYGNCYTFNDNSSSLWTSSLPGINNGLSLVVRTEQNDFIPLLSTVTG 334

>BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associated|
           transcript 3)
          Length = 1096

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -1

Query: 223 SRAIIDDPFLPITRPIFPGGTSKSERISTS-GTRTS-ASMSSGTVGR 89
           +R +I  P  P  RP  PGG   S  +    GT TS A M SG VG+
Sbjct: 495 TRVVIARPTPPQARPSHPGGPPVSGALGAGLGTNTSLAQMVSGLVGQ 541

>Y1756_CLOAB (Q97I96) UPF0109 protein CAC1756|
          Length = 75

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +3

Query: 102 PDDIEAEVRVPEVDILSLLDVPPGKMGRVIGRKGSSIMARERILQ 236
           PD+++      E  I+  L V P  MG+VIG++G    A   +++
Sbjct: 16  PDEVQVSEVTGEQSIILELKVAPEDMGKVIGKQGRIAKAIRTVIK 60

>BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-associated|
           transcript 3)
          Length = 1154

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -1

Query: 223 SRAIIDDPFLPITRPIFPGGTSKSERISTSGTRTSASMSSGTVGRGGQ 80
           +R +I  P  P  RP  PGG   S  +  +G  T+ S++    G  GQ
Sbjct: 501 TRVVIARPTPPQARPSHPGGPPVSGALQGAGLGTNTSLAQMVSGLVGQ 548

>Y1711_CLOPE (Q8XJP5) UPF0109 protein CPE1711|
          Length = 75

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 102 PDDIEAEVRVPEVDILSLLDVPPGKMGRVIGRKG 203
           P+D+     + E  I+  L V P  MG+VIG++G
Sbjct: 16  PEDVHVNEVLGEESIILELKVSPEDMGKVIGKQG 49

>KPB2_RABIT (P46018) Phosphorylase b kinase alpha regulatory chain, liver isoform|
            (Phosphorylase kinase alpha L subunit)
          Length = 1235

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = -1

Query: 208  DDPFLPITRPIFPGGTSKSERIST--SGTRTSASMSSG-TVGRGGQSACWL 65
            D+ F P+++ +     SKS R ST  S T TS+S S G  +  G +   WL
Sbjct: 1018 DEQFFPVSQTVSSSAYSKSVRSSTPSSPTGTSSSDSGGHHISWGERQGQWL 1068

>GUAA_SYNPX (Q7UA53) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 528

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
 Frame = +3

Query: 45  RCFCINDNQQADWPPLP-----TVPDDIEAEVRVPEVDILSLLDVPPG 173
           RC    D   ADW  LP     T+ + I  EV+     +L +   PPG
Sbjct: 476 RCVSSEDGMTADWSRLPYDLMETISNRIVNEVKGVNRVVLDITSKPPG 523

>RPC2_MOUSE (P59470) DNA-directed RNA polymerase III subunit 127.6 kDa|
            polypeptide (EC 2.7.7.6) (RNA polymerase III subunit 2)
            (RPC2)
          Length = 1133

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 66   CHLCKSTCSIAHFVLPDAMRIL 1
            CH CKS+C ++   +P A ++L
Sbjct: 1092 CHYCKSSCHVSSLRIPYACKLL 1113

>RPC2_HUMAN (Q9NW08) DNA-directed RNA polymerase III subunit 127.6 kDa|
            polypeptide (EC 2.7.7.6) (RNA polymerase III subunit 2)
            (RPC2)
          Length = 1133

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 66   CHLCKSTCSIAHFVLPDAMRIL 1
            CH CKS+C ++   +P A ++L
Sbjct: 1092 CHYCKSSCHVSSLRIPYACKLL 1113

>CREG1_HUMAN (O75629) CREG1 protein precursor (Cellular repressor of|
           E1A-stimulated genes 1)
          Length = 220

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 75  ADWPPLPTVPDDIEAEVRVPEVDILSLLDVPPG 173
           +DW  L T+   +EA    P  D+LSL D PPG
Sbjct: 66  SDWGALATI-STLEAVRGRPFADVLSLSDGPPG 97


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,514,342
Number of Sequences: 219361
Number of extensions: 617357
Number of successful extensions: 2388
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2388
length of database: 80,573,946
effective HSP length: 55
effective length of database: 68,509,091
effective search space used: 1644218184
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)