| Clone Name | basd25h18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK111736.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047L09, full insert sequence Length = 1632 Score = 559 bits (282), Expect = e-156 Identities = 384/418 (91%) Strand = Plus / Plus Query: 76 tgatggcatcctcggggaagatggaggggccatcggcgccagcgctccgacgggacccgt 135 ||||||| || |||||||||||||||||||| |||||||| ||| | || |||||||||| Sbjct: 241 tgatggcgtcgtcggggaagatggaggggccgtcggcgccggcgatgcggcgggacccgt 300 Query: 136 acgaggtgctctccgtatcaagagactcctccgaccaggagataaagtccgcctaccgca 195 |||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||| Sbjct: 301 acgaggtgctctccgtgccaagggactcctccgaccaggagatcaagtccgcctaccgca 360 Query: 196 agctcgctctcaagtatcacccggacaaaaatgctagcaacccagaagcgtcagagctct 255 ||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||||| |||| Sbjct: 361 agctcgcgctcaagtatcaccctgacaagaatgctagtaacccagaagcatcagaactct 420 Query: 256 tcaaagaagttgcatattcatacagtatcttgtcagaccctgagaaacggaggcaatatg 315 ||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 421 tcaaagaggttgcatattcatatagtatcttgtcagatcctgagaaacggaggcaatatg 480 Query: 316 atactgctggttttgaggcgttggaaaatgaaggaatggatatggagattgatttgtcca 375 ||||||||||||||||||| ||||| |||||||||||||||||||| ||||| || || | Sbjct: 481 atactgctggttttgaggcattggagaatgaaggaatggatatggaaattgacttatcta 540 Query: 376 atcttggaactgtgaacacaatgtttgctgcacttttcagcaagcttggggttcctatca 435 |||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||| Sbjct: 541 atcttggaactgtgaacacaatgtttgctgcacttttcagcaagctcggtgttccaatca 600 Query: 436 agacgacggtatctcctactgttcttgaagaagctatgaatggaacagtgacagtgag 493 |||| || |||||||||| |||||||||||||||||||| ||||||||| |||||||| Sbjct: 601 agaccacagtatctcctaatgttcttgaagaagctatgagtggaacagttacagtgag 658
>ref|NM_193773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1212 Score = 539 bits (272), Expect = e-150 Identities = 380/416 (91%) Strand = Plus / Plus Query: 78 atggcatcctcggggaagatggaggggccatcggcgccagcgctccgacgggacccgtac 137 ||||| || |||||||||||||||||||| |||||||| ||| | || |||||||||||| Sbjct: 1 atggcgtcgtcggggaagatggaggggccgtcggcgccggcgatgcggcgggacccgtac 60 Query: 138 gaggtgctctccgtatcaagagactcctccgaccaggagataaagtccgcctaccgcaag 197 |||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 61 gaggtgctctccgtgccaagggactcctccgaccaggagatcaagtccgcctaccgcaag 120 Query: 198 ctcgctctcaagtatcacccggacaaaaatgctagcaacccagaagcgtcagagctcttc 257 ||||| ||||||| ||||| ||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 121 ctcgcgctcaagttccaccctgacaagaatgctagtaacccagaagcatcagaactcttc 180 Query: 258 aaagaagttgcatattcatacagtatcttgtcagaccctgagaaacggaggcaatatgat 317 ||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 181 aaagaggttgcatattcatatagtatcttgtcagatcctgagaaacggaggcaatatgat 240 Query: 318 actgctggttttgaggcgttggaaaatgaaggaatggatatggagattgatttgtccaat 377 ||||||||||||||||| ||||| |||||||||||||||||||| ||||| || || ||| Sbjct: 241 actgctggttttgaggcattggagaatgaaggaatggatatggaaattgacttatctaat 300 Query: 378 cttggaactgtgaacacaatgtttgctgcacttttcagcaagcttggggttcctatcaag 437 |||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 301 cttggaactgtgaacacaatgtttgctgcacttttcagcaagctcggtgttccaatcaag 360 Query: 438 acgacggtatctcctactgttcttgaagaagctatgaatggaacagtgacagtgag 493 || || |||||||||| |||||||||||||||||||| ||||||||| |||||||| Sbjct: 361 accacagtatctcctaatgttcttgaagaagctatgagtggaacagttacagtgag 416
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 184 bits (93), Expect = 2e-43 Identities = 117/125 (93%) Strand = Plus / Plus Query: 209 gtatcacccggacaaaaatgctagcaacccagaagcgtcagagctcttcaaagaagttgc 268 ||||||||| ||||| |||||||| ||||||||||| ||||| ||||||||||| ||||| Sbjct: 18039365 gtatcaccctgacaagaatgctagtaacccagaagcatcagaactcttcaaagaggttgc 18039424 Query: 269 atattcatacagtatcttgtcagaccctgagaaacggaggcaatatgatactgctggttt 328 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 18039425 atattcatatagtatcttgtcagatcctgagaaacggaggcaatatgatactgctggttt 18039484 Query: 329 tgagg 333 ||||| Sbjct: 18039485 tgagg 18039489 Score = 172 bits (87), Expect = 7e-40 Identities = 123/135 (91%) Strand = Plus / Plus Query: 76 tgatggcatcctcggggaagatggaggggccatcggcgccagcgctccgacgggacccgt 135 ||||||| || |||||||||||||||||||| |||||||| ||| | || |||||||||| Sbjct: 18038217 tgatggcgtcgtcggggaagatggaggggccgtcggcgccggcgatgcggcgggacccgt 18038276 Query: 136 acgaggtgctctccgtatcaagagactcctccgaccaggagataaagtccgcctaccgca 195 |||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||| Sbjct: 18038277 acgaggtgctctccgtgccaagggactcctccgaccaggagatcaagtccgcctaccgca 18038336 Query: 196 agctcgctctcaagt 210 ||||||| ||||||| Sbjct: 18038337 agctcgcgctcaagt 18038351 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 331 aggcgttggaaaatgaaggaatggatatggagattgatttgtccaatcttggaactgtga 390 |||| ||||| |||||||||||||||||||| ||||| || || |||||||||||||||| Sbjct: 18040227 aggcattggagaatgaaggaatggatatggaaattgacttatctaatcttggaactgtga 18040286 Query: 391 acacaatgtttgctgcacttttcag 415 ||||||||||||||||||||||||| Sbjct: 18040287 acacaatgtttgctgcacttttcag 18040311 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 414 agcaagcttggggttcctatcaagacgacggtatctcctactgttcttgaagaagctatg 473 |||||||| || ||||| |||||||| || |||||||||| ||||||||||||||||||| Sbjct: 18040399 agcaagctcggtgttccaatcaagaccacagtatctcctaatgttcttgaagaagctatg 18040458 Query: 474 aatggaacagtgacagtgag 493 | ||||||||| |||||||| Sbjct: 18040459 agtggaacagttacagtgag 18040478 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 455 tgttcttgaagaagctatgaatggaacag 483 |||||||||||||||||| | |||||||| Sbjct: 13436657 tgttcttgaagaagctataagtggaacag 13436685
>dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0054L14 Length = 150022 Score = 184 bits (93), Expect = 2e-43 Identities = 117/125 (93%) Strand = Plus / Plus Query: 209 gtatcacccggacaaaaatgctagcaacccagaagcgtcagagctcttcaaagaagttgc 268 ||||||||| ||||| |||||||| ||||||||||| ||||| ||||||||||| ||||| Sbjct: 66606 gtatcaccctgacaagaatgctagtaacccagaagcatcagaactcttcaaagaggttgc 66665 Query: 269 atattcatacagtatcttgtcagaccctgagaaacggaggcaatatgatactgctggttt 328 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 66666 atattcatatagtatcttgtcagatcctgagaaacggaggcaatatgatactgctggttt 66725 Query: 329 tgagg 333 ||||| Sbjct: 66726 tgagg 66730 Score = 172 bits (87), Expect = 7e-40 Identities = 123/135 (91%) Strand = Plus / Plus Query: 76 tgatggcatcctcggggaagatggaggggccatcggcgccagcgctccgacgggacccgt 135 ||||||| || |||||||||||||||||||| |||||||| ||| | || |||||||||| Sbjct: 65458 tgatggcgtcgtcggggaagatggaggggccgtcggcgccggcgatgcggcgggacccgt 65517 Query: 136 acgaggtgctctccgtatcaagagactcctccgaccaggagataaagtccgcctaccgca 195 |||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||| Sbjct: 65518 acgaggtgctctccgtgccaagggactcctccgaccaggagatcaagtccgcctaccgca 65577 Query: 196 agctcgctctcaagt 210 ||||||| ||||||| Sbjct: 65578 agctcgcgctcaagt 65592 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 331 aggcgttggaaaatgaaggaatggatatggagattgatttgtccaatcttggaactgtga 390 |||| ||||| |||||||||||||||||||| ||||| || || |||||||||||||||| Sbjct: 67468 aggcattggagaatgaaggaatggatatggaaattgacttatctaatcttggaactgtga 67527 Query: 391 acacaatgtttgctgcacttttcag 415 ||||||||||||||||||||||||| Sbjct: 67528 acacaatgtttgctgcacttttcag 67552 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 414 agcaagcttggggttcctatcaagacgacggtatctcctactgttcttgaagaagctatg 473 |||||||| || ||||| |||||||| || |||||||||| ||||||||||||||||||| Sbjct: 67640 agcaagctcggtgttccaatcaagaccacagtatctcctaatgttcttgaagaagctatg 67699 Query: 474 aatggaacagtgacagtgag 493 | ||||||||| |||||||| Sbjct: 67700 agtggaacagttacagtgag 67719
>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504D03 Length = 139201 Score = 184 bits (93), Expect = 2e-43 Identities = 117/125 (93%) Strand = Plus / Plus Query: 209 gtatcacccggacaaaaatgctagcaacccagaagcgtcagagctcttcaaagaagttgc 268 ||||||||| ||||| |||||||| ||||||||||| ||||| ||||||||||| ||||| Sbjct: 15806 gtatcaccctgacaagaatgctagtaacccagaagcatcagaactcttcaaagaggttgc 15865 Query: 269 atattcatacagtatcttgtcagaccctgagaaacggaggcaatatgatactgctggttt 328 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 15866 atattcatatagtatcttgtcagatcctgagaaacggaggcaatatgatactgctggttt 15925 Query: 329 tgagg 333 ||||| Sbjct: 15926 tgagg 15930 Score = 172 bits (87), Expect = 7e-40 Identities = 123/135 (91%) Strand = Plus / Plus Query: 76 tgatggcatcctcggggaagatggaggggccatcggcgccagcgctccgacgggacccgt 135 ||||||| || |||||||||||||||||||| |||||||| ||| | || |||||||||| Sbjct: 14658 tgatggcgtcgtcggggaagatggaggggccgtcggcgccggcgatgcggcgggacccgt 14717 Query: 136 acgaggtgctctccgtatcaagagactcctccgaccaggagataaagtccgcctaccgca 195 |||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||| Sbjct: 14718 acgaggtgctctccgtgccaagggactcctccgaccaggagatcaagtccgcctaccgca 14777 Query: 196 agctcgctctcaagt 210 ||||||| ||||||| Sbjct: 14778 agctcgcgctcaagt 14792 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 331 aggcgttggaaaatgaaggaatggatatggagattgatttgtccaatcttggaactgtga 390 |||| ||||| |||||||||||||||||||| ||||| || || |||||||||||||||| Sbjct: 16668 aggcattggagaatgaaggaatggatatggaaattgacttatctaatcttggaactgtga 16727 Query: 391 acacaatgtttgctgcacttttcag 415 ||||||||||||||||||||||||| Sbjct: 16728 acacaatgtttgctgcacttttcag 16752 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 414 agcaagcttggggttcctatcaagacgacggtatctcctactgttcttgaagaagctatg 473 |||||||| || ||||| |||||||| || |||||||||| ||||||||||||||||||| Sbjct: 16840 agcaagctcggtgttccaatcaagaccacagtatctcctaatgttcttgaagaagctatg 16899 Query: 474 aatggaacagtgacagtgag 493 | ||||||||| |||||||| Sbjct: 16900 agtggaacagttacagtgag 16919
>gb|BT012842.1| Lycopersicon esculentum clone 113912R, mRNA sequence Length = 1704 Score = 172 bits (87), Expect = 7e-40 Identities = 237/287 (82%) Strand = Plus / Plus Query: 195 aagctcgctctcaagtatcacccggacaaaaatgctagcaacccagaagcgtcagagctc 254 ||||| |||||||||||||| || ||||| ||||||| ||| || ||||| ||||| | Sbjct: 227 aagcttgctctcaagtatcatcctgacaagaatgctaacaatcctgaagcttcagaacat 286 Query: 255 ttcaaagaagttgcatattcatacagtatcttgtcagaccctgagaaacggaggcaatat 314 ||||| || |||||||| ||||| || || | || || || |||||| ||||||||||| Sbjct: 287 ttcaaggaggttgcatactcatatagcattctatctgatccagagaaaaggaggcaatat 346 Query: 315 gatactgctggttttgaggcgttggaaaatgaaggaatggatatggagattgatttgtcc 374 |||| ||||| |||||||| | ||| |||||||||||||||||| |||||||||||| Sbjct: 347 gatatggctggctttgaggctcttgaagctgaaggaatggatatggaaattgatttgtcc 406 Query: 375 aatcttggaactgtgaacacaatgtttgctgcacttttcagcaagcttggggttcctatc 434 || ||||||||||| |||||||||||||| ||| | || |||||| | || ||||||||| Sbjct: 407 aaccttggaactgtcaacacaatgtttgcagcattgtttagcaagttgggtgttcctatc 466 Query: 435 aagacgacggtatctcctactgttcttgaagaagctatgaatggaac 481 || || || | ||| | | |||||||||||||||| |||||||||| Sbjct: 467 aaaacaactatctctgcgaatgttcttgaagaagctttgaatggaac 513
>ref|NM_105508.3| Arabidopsis thaliana ARG1 (ALTERED RESPONSE TO GRAVITY 1) AT1G68370 (ARG1) mRNA, complete cds Length = 1745 Score = 109 bits (55), Expect = 9e-21 Identities = 235/295 (79%) Strand = Plus / Plus Query: 201 gctctcaagtatcacccggacaaaaatgctagcaacccagaagcgtcagagctcttcaaa 260 |||||||||||||| ||||| || ||||| | ||| || || || || ||||| ||||| Sbjct: 332 gctctcaagtatcatccggataagaatgcgaacaatcctgatgcttctgagcttttcaag 391 Query: 261 gaagttgcatattcatacagtatcttgtcagaccctgagaaacggaggcaatatgatact 320 |||||||||| ||| || || || ||||| || ||||| || | ||||| ||||| | | Sbjct: 392 gaagttgcattttcgtatagcattttgtctgatcctgaaaagagaaggcactatgacaat 451 Query: 321 gctggttttgaggcgttggaaaatgaaggaatggatatggagattgatttgtccaatctt 380 || || |||||||| | || ||| |||||||||||||| ||||| ||||| || || Sbjct: 452 gcaggatttgaggcactcgatgctgatggaatggatatggaaattgacttgtcaaacctc 511 Query: 381 ggaactgtgaacacaatgtttgctgcacttttcagcaagcttggggttcctatcaagacg 440 || || || || || |||||||| ||| | |||||||| || || || ||||||||||| Sbjct: 512 gggaccgtaaataccatgtttgcagcattgttcagcaaactaggtgtgcctatcaagact 571 Query: 441 acggtatctcctactgttcttgaagaagctatgaatggaacagtgacagtgaggc 495 || |||||| ||| |||||||||||| |||||||||||||| || ||||| |||| Sbjct: 572 actgtatctgctaatgttcttgaagaggctatgaatggaactgttacagttaggc 626
>gb|BT025556.1| Arabidopsis thaliana At1g68370 mRNA, complete cds Length = 1233 Score = 109 bits (55), Expect = 9e-21 Identities = 235/295 (79%) Strand = Plus / Plus Query: 201 gctctcaagtatcacccggacaaaaatgctagcaacccagaagcgtcagagctcttcaaa 260 |||||||||||||| ||||| || ||||| | ||| || || || || ||||| ||||| Sbjct: 121 gctctcaagtatcatccggataagaatgcgaacaatcctgatgcttctgagcttttcaag 180 Query: 261 gaagttgcatattcatacagtatcttgtcagaccctgagaaacggaggcaatatgatact 320 |||||||||| ||| || || || ||||| || ||||| || | ||||| ||||| | | Sbjct: 181 gaagttgcattttcgtatagcattttgtctgatcctgaaaagagaaggcactatgacaat 240 Query: 321 gctggttttgaggcgttggaaaatgaaggaatggatatggagattgatttgtccaatctt 380 || || |||||||| | || ||| |||||||||||||| ||||| ||||| || || Sbjct: 241 gcaggatttgaggcactcgatgctgatggaatggatatggaaattgacttgtcaaacctc 300 Query: 381 ggaactgtgaacacaatgtttgctgcacttttcagcaagcttggggttcctatcaagacg 440 || || || || || |||||||| ||| | |||||||| || || || ||||||||||| Sbjct: 301 gggaccgtaaataccatgtttgcagcattgttcagcaaactaggtgtgcctatcaagact 360 Query: 441 acggtatctcctactgttcttgaagaagctatgaatggaacagtgacagtgaggc 495 || |||||| ||| |||||||||||| |||||||||||||| || ||||| |||| Sbjct: 361 actgtatctgctaatgttcttgaagaggctatgaatggaactgttacagttaggc 415
>gb|AF089810.1|AF089810 Arabidopsis thaliana Altered Response to Gravity (ARG1) mRNA, complete cds Length = 1682 Score = 109 bits (55), Expect = 9e-21 Identities = 235/295 (79%) Strand = Plus / Plus Query: 201 gctctcaagtatcacccggacaaaaatgctagcaacccagaagcgtcagagctcttcaaa 260 |||||||||||||| ||||| || ||||| | ||| || || || || ||||| ||||| Sbjct: 282 gctctcaagtatcatccggataagaatgcgaacaatcctgatgcttctgagcttttcaag 341 Query: 261 gaagttgcatattcatacagtatcttgtcagaccctgagaaacggaggcaatatgatact 320 |||||||||| ||| || || || ||||| || ||||| || | ||||| ||||| | | Sbjct: 342 gaagttgcattttcgtatagcattttgtctgatcctgaaaagagaaggcactatgacaat 401 Query: 321 gctggttttgaggcgttggaaaatgaaggaatggatatggagattgatttgtccaatctt 380 || || |||||||| | || ||| |||||||||||||| ||||| ||||| || || Sbjct: 402 gcaggatttgaggcactcgatgctgatggaatggatatggaaattgacttgtcaaacctc 461 Query: 381 ggaactgtgaacacaatgtttgctgcacttttcagcaagcttggggttcctatcaagacg 440 || || || || || |||||||| ||| | |||||||| || || || ||||||||||| Sbjct: 462 gggaccgtaaataccatgtttgcagcattgttcagcaaactaggtgtgcctatcaagact 521 Query: 441 acggtatctcctactgttcttgaagaagctatgaatggaacagtgacagtgaggc 495 || |||||| ||| |||||||||||| |||||||||||||| || ||||| |||| Sbjct: 522 actgtatctgctaatgttcttgaagaggctatgaatggaactgttacagttaggc 576
>gb|AY023331.1| Oryza sativa microsatellite MRG5656 containing (GTT)X9, genomic sequence Length = 227 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 76 tgatggcatcctcggggaagatggaggggccatcggcgccagcgctccgacgggacccgt 135 ||||||| || |||||||||||||||||||| |||||||| ||| | || |||||||||| Sbjct: 142 tgatggcgtcgtcggggaagatggaggggccgtcggcgccggcgatgcggcgggacccgt 201 Query: 136 acgaggtgctctccgt 151 |||||||||||||||| Sbjct: 202 acgaggtgctctccgt 217
>gb|AY022271.1| Oryza sativa microsatellite MRG4596 containing (AAC)X9, genomic sequence Length = 227 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 76 tgatggcatcctcggggaagatggaggggccatcggcgccagcgctccgacgggacccgt 135 ||||||| || |||||||||||||||||||| |||||||| ||| | || |||||||||| Sbjct: 86 tgatggcgtcgtcggggaagatggaggggccgtcggcgccggcgatgcggcgggacccgt 27 Query: 136 acgaggtgctctccgt 151 |||||||||||||||| Sbjct: 26 acgaggtgctctccgt 11
>gb|AC016447.5|AC016447 Arabidopsis thaliana chromosome 1 BAC T22E19 genomic sequence, complete sequence Length = 107816 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 410 tttcagcaagcttggggttcctatcaagacgacggtatctcctactgttcttgaagaagc 469 ||||||||| || || || ||||||||||| || |||||| ||| |||||||||||| || Sbjct: 10117 tttcagcaaactaggtgtgcctatcaagactactgtatctgctaatgttcttgaagaggc 10176 Query: 470 tatgaatggaacagtgacagtgaggc 495 |||||||||||| || ||||| |||| Sbjct: 10177 tatgaatggaactgttacagttaggc 10202
>gb|AC015986.4|AC015986 Arabidopsis thaliana chromosome 1 BAC T2E12 genomic sequence, complete sequence Length = 35229 Score = 75.8 bits (38), Expect = 1e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 410 tttcagcaagcttggggttcctatcaagacgacggtatctcctactgttcttgaagaagc 469 ||||||||| || || || ||||||||||| || |||||| ||| |||||||||||| || Sbjct: 33370 tttcagcaaactaggtgtgcctatcaagactactgtatctgctaatgttcttgaagaggc 33429 Query: 470 tatgaatggaacagtgacagtgaggc 495 |||||||||||| || ||||| |||| Sbjct: 33430 tatgaatggaactgttacagttaggc 33455
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 184 ccgcctaccgcaagctcgctctcaagtatcacccggacaa 223 ||||||||||||||||||| | |||||| ||||||||||| Sbjct: 4977638 ccgcctaccgcaagctcgcccacaagtaccacccggacaa 4977599
>gb|AC078891.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0092N12, complete sequence Length = 109198 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 455 tgttcttgaagaagctatgaatggaacagtgacag 489 |||||||||||||||||||| ||||||||| |||| Sbjct: 6302 tgttcttgaagaagctatgagtggaacagttacag 6336
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 455 tgttcttgaagaagctatgaatggaacagtgacag 489 |||||||||||||||||||| ||||||||| |||| Sbjct: 996252 tgttcttgaagaagctatgagtggaacagttacag 996218
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 455 tgttcttgaagaagctatgaatggaacagtgacag 489 |||||||||||||||||||| ||||||||| |||| Sbjct: 996252 tgttcttgaagaagctatgagtggaacagttacag 996218
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 455 tgttcttgaagaagctatgaatggaacagtgacag 489 |||||||||||||||||||| ||||||||| |||| Sbjct: 996249 tgttcttgaagaagctatgagtggaacagttacag 996215
>gb|DQ215321.1| Taeniopygia guttata clone 0058P0049B04 DnaJ (Hsp40)-like subfamily A member-like mRNA, complete sequence Length = 1471 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 186 gcctaccgcaagctcgctctcaagtatcacccggacaa 223 ||||| ||||||||||| |||||||| ||||||||||| Sbjct: 185 gcctatcgcaagctcgcactcaagtaccacccggacaa 222
>gb|DQ215320.1| Taeniopygia guttata clone 0061P0015G05 DnaJ (Hsp40)-like subfamily A member-like mRNA, complete sequence Length = 1432 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 186 gcctaccgcaagctcgctctcaagtatcacccggacaa 223 ||||| ||||||||||| |||||||| ||||||||||| Sbjct: 148 gcctatcgcaagctcgcactcaagtaccacccggacaa 185
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 180 aagtccgcctaccgcaagctcgctctcaagtatcacccggac 221 ||||||||||| ||||||||||| | ||||||||||||||| Sbjct: 1253462 aagtccgcctatcgcaagctcgcgatgaagtatcacccggac 1253503
>ref|NM_185281.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1044 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 187 cctaccgcaagctcgctctcaagtatcacccggacaa 223 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 131 cctaccgcaagctcgcgctcaagtaccaccccgacaa 167
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 187 cctaccgcaagctcgctctcaagtatcacccggacaa 223 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 121127 cctaccgcaagctcgcgctcaagtaccaccccgacaa 121163
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 187 cctaccgcaagctcgctctcaagtatcacccggacaa 223 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 3243410 cctaccgcaagctcgcgctcaagtaccaccccgacaa 3243446
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05, complete sequence Length = 167317 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 187 cctaccgcaagctcgctctcaagtatcacccggacaa 223 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 37234 cctaccgcaagctcgcgctcaagtaccaccccgacaa 37270
>ref|XM_793372.1| PREDICTED: Strongylocentrotus purpuratus similar to spermatogenesis apoptosis-related protein (LOC593917), mRNA Length = 1027 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 186 gcctaccgcaagctcgctctcaagtatcaccc 217 |||||||||||||||||| | ||||||||||| Sbjct: 143 gcctaccgcaagctcgctttgaagtatcaccc 174
>emb|BX815790.1|CNS0ACR8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS95ZB02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1698 Score = 48.1 bits (24), Expect = 0.027 Identities = 81/100 (81%) Strand = Plus / Plus Query: 396 atgtttgctgcacttttcagcaagcttggggttcctatcaagacgacggtatctcctact 455 |||||||| ||| | |||||| | || || || ||||| ||||| || |||||| ||| | Sbjct: 527 atgtttgcggcattgttcagcgaactaggtgtgcctatgaagactactgtatctgctaat 586 Query: 456 gttcttgaagaagctatgaatggaacagtgacagtgaggc 495 ||||||||||| ||||||| ||| || || ||||| |||| Sbjct: 587 gttcttgaagaggctatgagtgggactgttacagttaggc 626
>emb|CT033763.2| Medicago truncatula chromosome 5 clone mth2-139a2, COMPLETE SEQUENCE Length = 132108 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 385 ctgtgaacacaatgtttgctgcactttt 412 |||| ||||||||||||||||||||||| Sbjct: 27080 ctgtcaacacaatgtttgctgcactttt 27053
>ref|XM_308650.2| Anopheles gambiae str. PEST ENSANGP00000011260 (ENSANGG00000008771), partial mRNA Length = 1038 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 189 taccgcaagctcgctctcaagtatcacccggacaa 223 ||||||||||| || || ||||||||||||||||| Sbjct: 70 taccgcaagctggccctaaagtatcacccggacaa 104
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 44.1 bits (22), Expect = 0.43 Identities = 37/42 (88%) Strand = Plus / Plus Query: 186 gcctaccgcaagctcgctctcaagtatcacccggacaaaaat 227 ||||||||||| || || ||| ||||||||||||||||||| Sbjct: 22391 gcctaccgcaaactggccatcacgtatcacccggacaaaaat 22432
>ref|XM_845583.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog, subfamily B, member 12, transcript variant 2 (LOC489039), mRNA Length = 1296 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 186 gcctaccgcaagctcgctctcaagtatcacccggacaa 223 |||||||||||||| || ||||||| ||||||||||| Sbjct: 451 gcctaccgcaagctggccctcaagttccacccggacaa 488
>ref|XM_856921.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog, subfamily B, member 12, transcript variant 7 (LOC489039), mRNA Length = 1410 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 186 gcctaccgcaagctcgctctcaagtatcacccggacaa 223 |||||||||||||| || ||||||| ||||||||||| Sbjct: 451 gcctaccgcaagctggccctcaagttccacccggacaa 488
>ref|XM_856892.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog, subfamily B, member 12, transcript variant 6 (LOC489039), mRNA Length = 1318 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 186 gcctaccgcaagctcgctctcaagtatcacccggacaa 223 |||||||||||||| || ||||||| ||||||||||| Sbjct: 373 gcctaccgcaagctggccctcaagttccacccggacaa 410
>ref|XM_856863.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog, subfamily B, member 12, transcript variant 5 (LOC489039), mRNA Length = 1053 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 186 gcctaccgcaagctcgctctcaagtatcacccggacaa 223 |||||||||||||| || ||||||| ||||||||||| Sbjct: 451 gcctaccgcaagctggccctcaagttccacccggacaa 488
>ref|XM_546157.2| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog, subfamily B, member 12, transcript variant 1 (LOC489039), mRNA Length = 1429 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 186 gcctaccgcaagctcgctctcaagtatcacccggacaa 223 |||||||||||||| || ||||||| ||||||||||| Sbjct: 451 gcctaccgcaagctggccctcaagttccacccggacaa 488
>ref|XM_856789.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog, subfamily B, member 12, transcript variant 3 (LOC489039), mRNA Length = 1396 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 186 gcctaccgcaagctcgctctcaagtatcacccggacaa 223 |||||||||||||| || ||||||| ||||||||||| Sbjct: 451 gcctaccgcaagctggccctcaagttccacccggacaa 488
>ref|XM_545895.2| PREDICTED: Canis familiaris similar to DnaJ homolog subfamily A member 4, transcript variant 1 (LOC488777), mRNA Length = 1456 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 186 gcctaccgcaagctcgctctcaagtatcacccggacaa 223 |||||||| ||||| || |||||||| ||||||||||| Sbjct: 73 gcctaccggaagctggcgctcaagtaccacccggacaa 110
>ref|XM_845309.1| PREDICTED: Canis familiaris similar to DnaJ homolog subfamily A member 4, transcript variant 3 (LOC488777), mRNA Length = 1467 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 186 gcctaccgcaagctcgctctcaagtatcacccggacaa 223 |||||||| ||||| || |||||||| ||||||||||| Sbjct: 93 gcctaccggaagctggcgctcaagtaccacccggacaa 130
>gb|AC091778.13| Papio anubis clone rp41-280n2, complete sequence Length = 183807 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 189 taccgcaagctcgctctcaagtatcacccggacaaaaa 226 ||||||||||| || ||||||| |||||||||||||| Sbjct: 47691 taccgcaagctggcgctcaagtggcacccggacaaaaa 47728 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 189 taccgcaagctcgctctcaagtatcacccggacaaaaa 226 ||||||||||| || ||||||| |||||||||||||| Sbjct: 29786 taccgcaagctggcgctcaagtggcacccggacaaaaa 29823
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Minus Query: 184 ccgcctaccgcaagctcgctctcaagtatcaccc 217 |||| |||||||||||||| | |||||||||||| Sbjct: 5203111 ccgcgtaccgcaagctcgcgcgcaagtatcaccc 5203078
>ref|XM_369971.1| Magnaporthe grisea 70-15 hypothetical protein (MG06486.4) partial mRNA Length = 1083 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 tctcaagtatcacccggacaa 223 ||||||||||||||||||||| Sbjct: 132 tctcaagtatcacccggacaa 152
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 455 tgttcttgaagaagctatgaatggaacag 483 |||||||||||||||||| | |||||||| Sbjct: 8580352 tgttcttgaagaagctataagtggaacag 8580324
>ref|XM_812476.1| Trypanosoma cruzi strain CL Brener endosomal trafficking protein RME-8 (Tc00.1047053511511.10) partial mRNA Length = 6693 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 aagtatcacccggacaaaaat 227 ||||||||||||||||||||| Sbjct: 3979 aagtatcacccggacaaaaat 3999
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 205 tcaagtatcacccggacaaaaatgc 229 ||||||||||||| ||||||||||| Sbjct: 129276 tcaagtatcaccccgacaaaaatgc 129252
>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02, complete sequence Length = 137327 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 455 tgttcttgaagaagctatgaatggaacag 483 |||||||||||||||||| | |||||||| Sbjct: 61324 tgttcttgaagaagctataagtggaacag 61296
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 186 gcctaccgcaagctcgctctcaagtatcacccggaca 222 |||| |||||||||||| | |||||||||||| |||| Sbjct: 1520225 gccttccgcaagctcgcgcgcaagtatcaccccgaca 1520189
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 455 tgttcttgaagaagctatgaatggaacag 483 |||||||||||||||||| | |||||||| Sbjct: 8578187 tgttcttgaagaagctataagtggaacag 8578159
>dbj|AP003337.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1111_G12 Length = 112664 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 455 tgttcttgaagaagctatgaatggaacag 483 |||||||||||||||||| | |||||||| Sbjct: 81210 tgttcttgaagaagctataagtggaacag 81238
>dbj|AK120384.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073E14, full insert sequence Length = 4170 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 455 tgttcttgaagaagctatgaatggaacag 483 |||||||||||||||||| | |||||||| Sbjct: 1023 tgttcttgaagaagctataagtggaacag 1051
>dbj|AK071153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078H24, full insert sequence Length = 1108 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 455 tgttcttgaagaagctatgaatggaacag 483 |||||||||||||||||| | |||||||| Sbjct: 1028 tgttcttgaagaagctataagtggaacag 1056
>dbj|AB095737.1| Macaca fuscata Dnajb3 mRNA for DnaJ homolog type 2 member 3, complete cds Length = 1044 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 186 gcctaccgcaagctcgctctcaagtatcacccggacaaaaa 226 |||||||||||||| || ||||||| ||||| |||||||| Sbjct: 136 gcctaccgcaagctggcgctcaagtggcaccccgacaaaaa 176
>ref|XM_642146.1| Dictyostelium discoideum putative protein tyrosine kinase (DDB0191295), partial mRNA Length = 7848 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 attgatttgtccaatcttgg 382 |||||||||||||||||||| Sbjct: 1116 attgatttgtccaatcttgg 1135
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cggcccgagcagggtattgt 71 |||||||||||||||||||| Sbjct: 1895403 cggcccgagcagggtattgt 1895422
>gb|L23645.1| Caenorhabditis elegans cosmid F54F2, complete sequence Length = 39573 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 aaatgctagcaacccagaag 243 |||||||||||||||||||| Sbjct: 21628 aaatgctagcaacccagaag 21609
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 ggggccatcggcgccagcgctccg 124 |||||||||||||||||| ||||| Sbjct: 3313280 ggggccatcggcgccagccctccg 3313303
>ref|XM_413746.1| PREDICTED: Gallus gallus similar to pDJA1 chaperone (LOC415360), mRNA Length = 1866 Score = 40.1 bits (20), Expect = 6.7 Identities = 44/52 (84%) Strand = Plus / Plus Query: 172 aggagataaagtccgcctaccgcaagctcgctctcaagtatcacccggacaa 223 ||||||| ||| ||||||||||||||| || || ||||| ||||| ||||| Sbjct: 59 aggagatcaagcgcgcctaccgcaagctggcgctgaagtaccaccccgacaa 110
>gb|AY232269.1| Dictyostelium discoideum putative protein Roco7 (roco7) gene, complete cds Length = 8198 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 attgatttgtccaatcttgg 382 |||||||||||||||||||| Sbjct: 1376 attgatttgtccaatcttgg 1395
>emb|AL591397.3| Human DNA sequence from clone RP11-240M16 on chromosome 6 Contains the 3' end of a novel gene and a laminin receptor 1 (67kD ribosomal protein SA) (LAMR1) pseudogene, complete sequence Length = 82646 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 tggaaaatgaaggaatggat 356 |||||||||||||||||||| Sbjct: 21812 tggaaaatgaaggaatggat 21831
>emb|AL360295.7| Human DNA sequence from clone RP11-378I13 on chromosome 1 Contains the 5' end of a novel gene and a novel gene, complete sequence Length = 51173 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 gcagggtattgttccctgat 79 |||||||||||||||||||| Sbjct: 872 gcagggtattgttccctgat 853
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 186 gcctaccgcaagctcgctctcaagtatcaccc 217 ||||||||||||||||| | |||||| ||||| Sbjct: 224402 gcctaccgcaagctcgcgcgcaagtaccaccc 224433
>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13 Length = 348676 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 ggggccatcggcgccagcgctccg 124 |||||||||||||||||| ||||| Sbjct: 199923 ggggccatcggcgccagccctccg 199946
>emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 11/14 Length = 318050 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 ggggccatcggcgccagcgctccg 124 |||||||||||||||||| ||||| Sbjct: 150649 ggggccatcggcgccagccctccg 150672
>gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold Length = 489372 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 gctgcacttttcagcaagct 421 |||||||||||||||||||| Sbjct: 163350 gctgcacttttcagcaagct 163369
>gb|U00024.1|MTU00024 Mycobacterium tuberculosis cosmid tbc2 Length = 31175 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 ggggccatcggcgccagcgctccg 124 |||||||||||||||||| ||||| Sbjct: 5645 ggggccatcggcgccagccctccg 5622
>ref|NM_066546.3| Caenorhabditis elegans PeRoXisome assembly factor family member (prx-19) (prx-19) mRNA, complete cds Length = 1182 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 aaatgctagcaacccagaag 243 |||||||||||||||||||| Sbjct: 360 aaatgctagcaacccagaag 379
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 gggacccgtacgaggtgctc 146 |||||||||||||||||||| Sbjct: 7174903 gggacccgtacgaggtgctc 7174884
>gb|AE009453.1| Brucella melitensis 16M chromosome I, section 10 of 195 of the complete sequence Length = 8833 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cggcccgagcagggtattgt 71 |||||||||||||||||||| Sbjct: 4348 cggcccgagcagggtattgt 4329
>dbj|AP007254.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa211K08 Length = 41043 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccggcggcccgagcagggta 67 |||||||||||||||||||| Sbjct: 37221 ccggcggcccgagcagggta 37202
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cggcccgagcagggtattgt 71 |||||||||||||||||||| Sbjct: 1912132 cggcccgagcagggtattgt 1912151
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 gggacccgtacgaggtgctc 146 |||||||||||||||||||| Sbjct: 52314 gggacccgtacgaggtgctc 52295
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 gggacccgtacgaggtgctc 146 |||||||||||||||||||| Sbjct: 9907 gggacccgtacgaggtgctc 9888
>ref|XM_308251.2| Anopheles gambiae str. PEST ENSANGP00000010799 (ENSANGG00000008310), partial mRNA Length = 732 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ctcaagtatcacccggacaa 223 |||||||||||||||||||| Sbjct: 190 ctcaagtatcacccggacaa 209
>gb|AY109656.1| Zea mays CL931_1 mRNA sequence Length = 2057 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gggacccgtacgaggtgctc 146 |||||||||||||||||||| Sbjct: 337 gggacccgtacgaggtgctc 356
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 cggcccgagcagggtattgt 71 |||||||||||||||||||| Sbjct: 1909261 cggcccgagcagggtattgt 1909280
>gb|AD000009.1|MSGY2 Mycobacterium tuberculosis sequence from clone y2 Length = 31176 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 ggggccatcggcgccagcgctccg 124 |||||||||||||||||| ||||| Sbjct: 5645 ggggccatcggcgccagccctccg 5622 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,742,240 Number of Sequences: 3902068 Number of extensions: 3742240 Number of successful extensions: 69701 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69112 Number of HSP's gapped (non-prelim): 584 length of query: 495 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 473 effective length of database: 17,147,199,772 effective search space: 8110625492156 effective search space used: 8110625492156 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)