Clone Information

BLAST Search Result

Clone Name	basd25g12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	SIAL_RAT (P13839) Bone sialoprotein-2 precursor (Bone sialoprote...	32	0.69
2	HLES_DROME (Q02308) Protein hairless	32	0.90
3	SPT5H_BRARE (Q9DDT5) Transcription elongation factor SPT5 (DRB s...	32	1.2
4	KE4_PONPY (Q5RFD5) Zinc transporter SLC39A7 (Solute carrier fami...	31	2.0
5	PCX1_MOUSE (Q9QYC1) Pecanex-like protein 1 (Pecanex homolog) (Fr...	30	2.6
6	HAT1_USTMA (Q4PBE6) Histone acetyltransferase type B catalytic s...	30	3.4
7	PCX1_HUMAN (Q96RV3) Pecanex-like protein 1 (Pecanex homolog)	30	3.4
8	WAPL_DROME (Q9W517) Protein wings apart-like (Protein parallel s...	30	4.4
9	ZFH1_DROME (P28166) Zinc finger protein 1 (Zinc finger homeodoma...	30	4.4
10	BRAC_CHICK (P79777) Brachyury protein (T protein)	30	4.4
11	NFYA_RAT (P18576) Nuclear transcription factor Y subunit alpha (...	30	4.4
12	NFYA_BOVIN (Q5E9S2) Nuclear transcription factor Y subunit alpha...	30	4.4
13	SYUA_MACMU (P61143) Alpha-synuclein	30	4.4
14	SYUA_MACFA (P61142) Alpha-synuclein	30	4.4
15	MDTK_PHOLL (Q7N3V2) Multidrug resistance protein mdtK (Multidrug...	29	5.8
16	HR38_DROME (P49869) Probable nuclear hormone receptor HR38 (dHR38)	29	5.8
17	SYUA_PONPA (P61146) Alpha-synuclein	29	5.8
18	SYUA_PANTR (P61145) Alpha-synuclein	29	5.8
19	SYUA_PANPA (P61144) Alpha-synuclein	29	5.8
20	SYUA_LAGLA (P61141) Alpha-synuclein	29	5.8
21	SYUA_HUMAN (P37840) Alpha-synuclein (Non-A beta component of AD ...	29	5.8
22	SYUA_GORGO (P61140) Alpha-synuclein	29	5.8
23	SYUA_ERYPA (P61139) Alpha-synuclein	29	5.8
24	SYUA_ATEGE (P61138) Alpha-synuclein	29	5.8
25	APS_RAT (Q9Z200) SH2 and PH domain-containing adapter protein AP...	29	5.8
26	PTP1_NPVOP (O10274) Putative tyrosine-protein phosphatase 1 (EC ...	29	5.8
27	TATB_HAEIN (P57047) Sec-independent protein translocase protein ...	29	7.6
28	ANR11_HUMAN (Q6UB99) Ankyrin repeat domain-containing protein 11...	29	7.6
29	NFYA_MOUSE (P23708) Nuclear transcription factor Y subunit alpha...	29	7.6
30	CCNL1_MOUSE (Q52KE7) Cyclin-L1 (Cyclin-L) (Cyclin Ania-6a)	29	7.6
31	NFYA_HUMAN (P23511) Nuclear transcription factor Y subunit alpha...	29	7.6
32	SYUA_SERCA (Q91448) Alpha-synuclein (Synelfin)	29	7.6
33	SYUA_SAGLB (P61147) Alpha-synuclein	29	7.6
34	SYUA_RAT (P37377) Alpha-synuclein	29	7.6
35	SYUA_MOUSE (O55042) Alpha-synuclein (Non-A beta component of AD ...	29	7.6
36	CUT_DROME (P10180) Homeobox protein cut	29	7.6
37	APS_MOUSE (Q9JID9) SH2 and PH domain-containing adapter protein ...	29	7.6
38	CRYD_NEUCR (Q7SI68) Putative crytochrome DASH, mitochondrial pre...	29	7.6
39	ATCU_RHILV (Q9X5V3) Copper-transporting P-type ATPase (EC 3.6.3.4)	29	7.6
40	COAE_PARUW (Q6MEQ3) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosph...	28	9.9
41	HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4...	28	9.9
42	MDTK_YERPS (Q66A27) Multidrug resistance protein mdtK (Multidrug...	28	9.9
43	MDTK_YERPE (Q8ZDZ8) Multidrug resistance protein mdtK (Multidrug...	28	9.9
44	BIOH_NITEU (Q82SL8) Carboxylesterase bioH (EC 3.1.1.1) (Biotin s...	28	9.9
45	HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor	28	9.9
46	BCL2_HUMAN (P10415) Apoptosis regulator Bcl-2	28	9.9
47	IF2_RALEJ (Q46ZP1) Translation initiation factor IF-2	28	9.9
48	YNG2_YARLI (Q6C5V7) Chromatin modification-related protein YNG2 ...	28	9.9
49	KHSE_BACCR (Q81EK4) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)	28	9.9
50	HXK1_MOUSE (P17710) Hexokinase-1 (EC 2.7.1.1) (Hexokinase type I...	28	9.9
51	HNRPU_HUMAN (Q00839) Heterogenous nuclear ribonucleoprotein U (h...	28	9.9

>SIAL_RAT (P13839) Bone sialoprotein-2 precursor (Bone sialoprotein II) (BSP|
           II) (Cell-binding sialoprotein) (Integrin-binding
           sialoprotein)
          Length = 320

 Score = 32.3 bits (72), Expect = 0.69
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 476 GVDEYGDAAGLEVAELHHPALAGDLE-QQPRREEDEEHQPDE 354
           GV+   DA  LE+A L  P  AGD E + P+ +E +E + +E
Sbjct: 119 GVETTADAGKLELAALQLPKKAGDAEGKAPKMKESDEEEEEE 160

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>HLES_DROME (Q02308) Protein hairless|
          Length = 1077

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
 Frame = -1

Query: 433 NSTILPLPGIWSSSPGERR-------MKSTSPMNTGAQSAMPAPLAASGTGLAR*LTSAP 275
           +S+  P PG  S+SP ERR       ++ +SP++       P P   +G G A   TSAP
Sbjct: 816 SSSSCPSPGDRSASPPERRHMQQQPHLQRSSPLH---YYMYPPPPQVNGNGSAGSPTSAP 872

Query: 274 PT 269
           PT
Sbjct: 873 PT 874

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>SPT5H_BRARE (Q9DDT5) Transcription elongation factor SPT5 (DRB|
           sensitivity-inducing factor large subunit) (DSIF large
           subunit) (Protein foggy)
          Length = 1084

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -3

Query: 470 DEYGDAAGLEVAELHHPALAGDLEQQPRREEDEEHQPDEHRRPVRHAG 327
           +E G  AG + AE        DLE +   +E+EE   D  R+  RH G
Sbjct: 30  EEQGSVAGSDKAEEE----GEDLEDEEEYDEEEEEDDDRPRKKARHGG 73

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>KE4_PONPY (Q5RFD5) Zinc transporter SLC39A7 (Solute carrier family 39 member|
           7) (Histidine-rich membrane protein Ke4)
          Length = 469

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +2

Query: 167 YTQSHSHATLMSSHSFHSPHRSYNHRAGEGTSCNRRGGRGQSAS 298
           +   HSH  L   HS    H S  HR     + + RGG G+S +
Sbjct: 79  HDHGHSHGDLHHGHSHGHSHESLYHRGHGHDNEHSRGGYGESGA 122

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>PCX1_MOUSE (Q9QYC1) Pecanex-like protein 1 (Pecanex homolog) (Fragment)|
          Length = 1460

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -1

Query: 400  SSSPGERRMKSTSPMNTGAQSAMPAPLAASGTGLAR*LTSAPPTVAAGSFTCSV 239
            +S PG   + ++ P N  +Q +   P   +G+GL    TS PPT+       SV
Sbjct: 1175 TSCPGNSAVTASDPHNNVSQGSTGHPGQGAGSGLHPPTTSYPPTLGTSHSAHSV 1228

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>HAT1_USTMA (Q4PBE6) Histone acetyltransferase type B catalytic subunit (EC|
           2.3.1.48)
          Length = 448

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -3

Query: 473 VDEYGDAAGLEVAEL--HHPALAGDLEQQPRREEDEEHQPDEH 351
           V+EYGD  G++V +L    P+  G L      E+ E+ Q D H
Sbjct: 391 VEEYGDMVGVDVEDLLDDGPSGTGALYGADEEEDQEQGQGDRH 433

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>PCX1_HUMAN (Q96RV3) Pecanex-like protein 1 (Pecanex homolog)|
          Length = 2341

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = -1

Query: 400  SSSPGERRMKSTSPMNTGAQSAMPAPLAASGTGLAR*LTSAPPTVAAGSFTCSVIVGPV 224
            +S  G     + +P +   Q ++  P   SGTGL   +TS PPT+     + SV  G V
Sbjct: 2056 TSCTGNNATTANNPHSNVTQGSIGNPGQGSGTGLHPPVTSYPPTLGTSHSSHSVQSGLV 2114

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>WAPL_DROME (Q9W517) Protein wings apart-like (Protein parallel sister|
           chromatids)
          Length = 1741

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -3

Query: 422 PALAGDLEQQPRREEDEEHQPDEHRRPVRHAGPLSCLRHRARSLIDLCPP 273
           P L G+ + +P  EED++ QP   +R  R  G       +A + +D+ PP
Sbjct: 683 PRLNGNTDPEPTEEEDQQQQP---KRATRGRG------RKANNNVDVTPP 723

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>ZFH1_DROME (P28166) Zinc finger protein 1 (Zinc finger homeodomain protein 1)|
          Length = 1054

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 401 EQQPRREEDEEHQPDEHRRPVRHAGPLSCLR 309
           EQ+P    +E   P E   PV HA  L C R
Sbjct: 602 EQEPLNVAEERQTPVEEHAPVEHAADLRCSR 632

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>BRAC_CHICK (P79777) Brachyury protein (T protein)|
          Length = 433

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -1

Query: 478 TAWTSMEMPLVWKLPNSTILPLPGIWSSSPG-ERRMKSTSPMNTGAQSAMPAPLAAS 311
           TA +S + P +W + NSTI P P     S G   +    SP++    +A+P P+ A+
Sbjct: 340 TATSSSQYPNLWSVSNSTITPAPQSSGMSNGLSSQFLRGSPVH---YTALPHPVTAT 393

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>NFYA_RAT (P18576) Nuclear transcription factor Y subunit alpha (Nuclear|
           transcription factor Y subunit A) (NF-YA) (CAAT-box
           DNA-binding protein subunit A) (CCAAT-binding
           transcription factor subunit B) (CBF-B)
          Length = 341

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
 Frame = +3

Query: 219 VHTGPTITEQ--VKEPAATVGGAEVNQRASPVPEAAKGAGMADWAPVFIGLVLFILLSPG 392
           V+   TI +Q  +  PAA++ GA++ Q  +     + G G      V + +   ++ S G
Sbjct: 173 VNADGTILQQGMITIPAASLAGAQIVQTGANTNTTSSGQGT---VTVTLPVAGNVVNSGG 229

Query: 393 LLLQIPGKGRMVEFGNFQTSGISILVHAVIY 485
           +++ +PG G +         G  +L    +Y
Sbjct: 230 MVMMVPGAGSVPAIQRIPLPGAEMLEEEPLY 260

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>NFYA_BOVIN (Q5E9S2) Nuclear transcription factor Y subunit alpha (Nuclear|
           transcription factor Y subunit A) (NF-YA) (CAAT-box
           DNA-binding protein subunit A)
          Length = 341

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
 Frame = +3

Query: 219 VHTGPTITEQ--VKEPAATVGGAEVNQRASPVPEAAKGAGMADWAPVFIGLVLFILLSPG 392
           V+   TI +Q  +  PAA++ GA++ Q  +     + G G      V + +   ++ S G
Sbjct: 173 VNADGTILQQGMITIPAASLAGAQIVQTGANTNTTSSGQGT---VTVTLPVAGNVVNSGG 229

Query: 393 LLLQIPGKGRMVEFGNFQTSGISILVHAVIY 485
           +++ +PG G +         G  +L    +Y
Sbjct: 230 MVMMVPGAGSVPAIQRIPLPGAEMLEEEPLY 260

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>SYUA_MACMU (P61143) Alpha-synuclein|
          Length = 140

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +3

Query: 219 VHTGPTITEQVKEPAATVGGAEVNQRASPVPEAAKGAGMADWAPVFI 359
           VH   T+ E+ KE    VGGA V    +   +  +GAG    A  FI
Sbjct: 49  VHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFI 95

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>SYUA_MACFA (P61142) Alpha-synuclein|
          Length = 140

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +3

Query: 219 VHTGPTITEQVKEPAATVGGAEVNQRASPVPEAAKGAGMADWAPVFI 359
           VH   T+ E+ KE    VGGA V    +   +  +GAG    A  FI
Sbjct: 49  VHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFI 95

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>MDTK_PHOLL (Q7N3V2) Multidrug resistance protein mdtK (Multidrug-efflux|
           transporter)
          Length = 457

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
 Frame = +3

Query: 231 PTITEQVKEPAATVGGAEVNQRASPVPEAAKGAGMADWAPVFI-GLVLFILLSPGLLLQI 407
           P I  Q  + A  V    +    S    +A   G + W PV + G  L + L+P ++ Q+
Sbjct: 17  PVIIAQFSQTAMGVVDTVMAGSVSATDMSAVAVGTSIWLPVILFGYGLLLALTP-IIAQM 75

Query: 408 PGKGR------MVEFGNFQTSGISILVHAVIY 485
            G GR        + G +    +SI++ A++Y
Sbjct: 76  NGSGRRNLIASQTQQGFWLAIFLSIIIIAILY 107

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>HR38_DROME (P49869) Probable nuclear hormone receptor HR38 (dHR38)|
          Length = 1073

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 9/45 (20%)
 Frame = -3

Query: 422 PALAGDLEQQPRREEDEEHQPDEHRRPVRH---------AGPLSC 315
           PA+A   +QQ ++++ ++ Q  +H++  +H          GPLSC
Sbjct: 434 PAIALHAQQQQQQQQQQQQQQQQHQQQQQHLQLQLISPIGGPLSC 478

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>SYUA_PONPA (P61146) Alpha-synuclein|
          Length = 140

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 219 VHTGPTITEQVKEPAATVGGAEVNQRASPVPEAAKGAGMADWAPVFI 359
           VH   T+ E+ KE    VGGA V    +   +  +GAG    A  F+
Sbjct: 49  VHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFV 95

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>SYUA_PANTR (P61145) Alpha-synuclein|
          Length = 140

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 219 VHTGPTITEQVKEPAATVGGAEVNQRASPVPEAAKGAGMADWAPVFI 359
           VH   T+ E+ KE    VGGA V    +   +  +GAG    A  F+
Sbjct: 49  VHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFV 95

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>SYUA_PANPA (P61144) Alpha-synuclein|
          Length = 140

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 219 VHTGPTITEQVKEPAATVGGAEVNQRASPVPEAAKGAGMADWAPVFI 359
           VH   T+ E+ KE    VGGA V    +   +  +GAG    A  F+
Sbjct: 49  VHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFV 95

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>SYUA_LAGLA (P61141) Alpha-synuclein|
          Length = 140

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +3

Query: 219 VHTGPTITEQVKEPAATVGGAEVNQRASPVPEAAKGAGMADWAPVFI 359
           VH   T+ E+ KE   +VGGA V    +   +  +GAG    A  F+
Sbjct: 49  VHGVTTVAEKTKEQVTSVGGAVVTGVTAVAQKTVEGAGNIAAATGFV 95

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>SYUA_HUMAN (P37840) Alpha-synuclein (Non-A beta component of AD amyloid)|
           (Non-A4 component of amyloid precursor) (NACP)
          Length = 140

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 219 VHTGPTITEQVKEPAATVGGAEVNQRASPVPEAAKGAGMADWAPVFI 359
           VH   T+ E+ KE    VGGA V    +   +  +GAG    A  F+
Sbjct: 49  VHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFV 95

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>SYUA_GORGO (P61140) Alpha-synuclein|
          Length = 140

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 219 VHTGPTITEQVKEPAATVGGAEVNQRASPVPEAAKGAGMADWAPVFI 359
           VH   T+ E+ KE    VGGA V    +   +  +GAG    A  F+
Sbjct: 49  VHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFV 95

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>SYUA_ERYPA (P61139) Alpha-synuclein|
          Length = 140

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 219 VHTGPTITEQVKEPAATVGGAEVNQRASPVPEAAKGAGMADWAPVFI 359
           VH   T+ E+ KE    VGGA V    +   +  +GAG    A  F+
Sbjct: 49  VHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFV 95

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>SYUA_ATEGE (P61138) Alpha-synuclein|
          Length = 140

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +3

Query: 219 VHTGPTITEQVKEPAATVGGAEVNQRASPVPEAAKGAGMADWAPVFI 359
           VH   T+ E+ KE   +VGGA V    +   +  +GAG    A  F+
Sbjct: 49  VHGVTTVAEKTKEQVTSVGGAVVTGVTAVAQKTVEGAGNIAAATGFV 95

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>APS_RAT (Q9Z200) SH2 and PH domain-containing adapter protein APS (Adapter|
           protein with pleckstrin homology and Src homology 2
           domains)
          Length = 621

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 16/58 (27%), Positives = 24/58 (41%)
 Frame = -1

Query: 430 STILPLPGIWSSSPGERRMKSTSPMNTGAQSAMPAPLAASGTGLAR*LTSAPPTVAAG 257
           +T  P+P  W+   G+    S +       S      A+S +G +   TS PP  A G
Sbjct: 521 NTAAPVPACWTEPAGQHYFSSLATATCPPTSPSNGAGASSSSGSSSSATSVPPRPAEG 578

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>PTP1_NPVOP (O10274) Putative tyrosine-protein phosphatase 1 (EC 3.1.3.48)|
           (Protein-tyrosine phosphatase 1)
          Length = 220

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +2

Query: 32  LASKRTACADEHTSGA-CGKAWCTGGDRMRR 121
           L S+R A     TS   CG AWCT G R RR
Sbjct: 2   LTSRRWAVIYTRTSERNCGGAWCTNGVRRRR 32

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>TATB_HAEIN (P57047) Sec-independent protein translocase protein tatB homolog|
          Length = 186

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 228 GPTITEQVKEPAATVGGAEVNQRASPVPEAAKGAGMADWAP 350
           G T+ +Q+KE  +    AE +Q A  V EAA+    A+  P
Sbjct: 104 GTTVEDQIKEIKSAAENAEKSQNAISVEEAAETLSEAERTP 144

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>ANR11_HUMAN (Q6UB99) Ankyrin repeat domain-containing protein 11 (Ankyrin|
            repeat-containing cofactor 1)
          Length = 2664

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -3

Query: 449  GLEVAELHHPALAGDLEQQPRREEDEEHQPDEHR 348
            GLE  E HHPA   + +  P +E  E+ +P+ ++
Sbjct: 997  GLEPWERHHPAREKEKKDGPDKERKEKTKPERYK 1030

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>NFYA_MOUSE (P23708) Nuclear transcription factor Y subunit alpha (Nuclear|
           transcription factor Y subunit A) (NF-YA) (CAAT-box
           DNA-binding protein subunit A)
          Length = 346

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 17/83 (20%), Positives = 37/83 (44%)
 Frame = +3

Query: 237 ITEQVKEPAATVGGAEVNQRASPVPEAAKGAGMADWAPVFIGLVLFILLSPGLLLQIPGK 416
           ++  +  PAA++ GA++ Q  +     + G G      V + +   ++ S G+++ +PG 
Sbjct: 186 VSGMITIPAASLAGAQIVQTGANTNTTSSGQGT---VTVTLPVAGNVVNSGGMVMMVPGA 242

Query: 417 GRMVEFGNFQTSGISILVHAVIY 485
           G +         G  +L    +Y
Sbjct: 243 GSVPAIQRIPLPGAEMLEEEPLY 265

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>CCNL1_MOUSE (Q52KE7) Cyclin-L1 (Cyclin-L) (Cyclin Ania-6a)|
          Length = 532

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +2

Query: 152 RLKAIYTQSHSHATLMSSHSFHSPHRSYNH-RAGEGTSCNRRGGRGQSASE 301
           R +   + S S +   S    HSP R YN+ R+  GT  +R   R +S SE
Sbjct: 391 RSRTSRSASRSRSRTRSRSRSHSPRRHYNNRRSRSGTYSSRSRSRSRSHSE 441

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>NFYA_HUMAN (P23511) Nuclear transcription factor Y subunit alpha (Nuclear|
           transcription factor Y subunit A) (NF-YA) (CAAT-box
           DNA-binding protein subunit A)
          Length = 347

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 17/83 (20%), Positives = 37/83 (44%)
 Frame = +3

Query: 237 ITEQVKEPAATVGGAEVNQRASPVPEAAKGAGMADWAPVFIGLVLFILLSPGLLLQIPGK 416
           ++  +  PAA++ GA++ Q  +     + G G      V + +   ++ S G+++ +PG 
Sbjct: 187 VSGMITIPAASLAGAQIVQTGANTNTTSSGQGT---VTVTLPVAGNVVNSGGMVMMVPGA 243

Query: 417 GRMVEFGNFQTSGISILVHAVIY 485
           G +         G  +L    +Y
Sbjct: 244 GSVPAIQRIPLPGAEMLEEEPLY 266

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>SYUA_SERCA (Q91448) Alpha-synuclein (Synelfin)|
          Length = 143

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 219 VHTGPTITEQVKEPAATVGGAEVNQRASPVPEAAKGAG 332
           VH   T+ E+ KE  + VGGA V    +   +  +GAG
Sbjct: 49  VHGVTTVAEKTKEQVSNVGGAVVTGVTAVAQKTVEGAG 86

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>SYUA_SAGLB (P61147) Alpha-synuclein|
          Length = 140

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 219 VHTGPTITEQVKEPAATVGGAEVNQRASPVPEAAKGAGMADWAPVFI 359
           VH   T+ E+ KE    VGGA V    +   +  +GAG    A  F+
Sbjct: 49  VHGVTTVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGNIAAATGFV 95

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>SYUA_RAT (P37377) Alpha-synuclein|
          Length = 140

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 219 VHTGPTITEQVKEPAATVGGAEVNQRASPVPEAAKGAGMADWAPVFI 359
           VH   T+ E+ KE    VGGA V    +   +  +GAG    A  F+
Sbjct: 49  VHGVTTVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGNIAAATGFV 95

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>SYUA_MOUSE (O55042) Alpha-synuclein (Non-A beta component of AD amyloid)|
           (Non-A4 component of amyloid precursor) (NACP)
          Length = 140

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 219 VHTGPTITEQVKEPAATVGGAEVNQRASPVPEAAKGAGMADWAPVFI 359
           VH   T+ E+ KE    VGGA V    +   +  +GAG    A  F+
Sbjct: 49  VHGVTTVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGNIAAATGFV 95

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>CUT_DROME (P10180) Homeobox protein cut|
          Length = 2175

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = -1

Query: 349  GAQSAMPAPLAASGTGLAR*LTSAPPTVAAGS 254
            G   A PAP +  GTG     T+APPT  A S
Sbjct: 1232 GGTPAPPAPPSGPGTGAGAPPTAAPPTGGASS 1263

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>APS_MOUSE (Q9JID9) SH2 and PH domain-containing adapter protein APS (Adapter|
           protein with pleckstrin homology and Src homology 2
           domains)
          Length = 621

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 16/58 (27%), Positives = 24/58 (41%)
 Frame = -1

Query: 430 STILPLPGIWSSSPGERRMKSTSPMNTGAQSAMPAPLAASGTGLAR*LTSAPPTVAAG 257
           +T  P+P  W+   G+    S +       S      A+S +G +   TS PP  A G
Sbjct: 521 NTAAPVPACWTEPAGQHYFSSLATATCPPASPSNGAGASSSSGSSSSATSLPPRPAEG 578

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>CRYD_NEUCR (Q7SI68) Putative crytochrome DASH, mitochondrial precursor|
          Length = 745

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 173 QSHSHATLMSSHSFHSPHRSYNHRAGEGTSCNRRGGRG 286
           +SHSH    +  ++H  HR  ++  G G     RGGRG
Sbjct: 650 RSHSHQH--NQQNYHHSHRGNDYTRGGGGGRGGRGGRG 685

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>ATCU_RHILV (Q9X5V3) Copper-transporting P-type ATPase (EC 3.6.3.4)|
          Length = 841

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 136 PTSRPSPEGHIYTVTLPRHPHVLALLP 216
           PT++P+P+G +Y  T P HP V++  P
Sbjct: 129 PTAKPAPKGTLY--TCPMHPEVVSDRP 153

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>COAE_PARUW (Q6MEQ3) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A|
           kinase)
          Length = 203

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 12/29 (41%), Positives = 23/29 (79%)
 Frame = -3

Query: 449 GLEVAELHHPALAGDLEQQPRREEDEEHQ 363
           GLE  ++ HPA+ G++EQQ ++++D ++Q
Sbjct: 84  GLE--KILHPAVYGEIEQQYQKQQDSKNQ 110

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>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage|
           factor IB) (CFIB)
          Length = 534

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +2

Query: 227 RSYNHRAGEGTSCNRRGGRG 286
           R YNHR+G     N RGGRG
Sbjct: 501 RDYNHRSGGNHRRNGRGGRG 520

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>MDTK_YERPS (Q66A27) Multidrug resistance protein mdtK (Multidrug-efflux|
           transporter)
          Length = 457

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
 Frame = +3

Query: 231 PTITEQVKEPAATVGGAEVNQRASPVPEAAKGAGMADWAP-VFIGLVLFILLSPGLLLQI 407
           P +  Q+ + A  V    +    S    AA   G + W P +  G  L + L+P  + Q+
Sbjct: 17  PVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTSIWLPAILFGHGLLLALTP-TVAQL 75

Query: 408 PGKGRMVEFGNFQTSG------ISILVHAVIY 485
            G GR  +  +    G      +S+L+  V+Y
Sbjct: 76  NGSGRRSQIAHQVRQGFWLALCVSVLIMLVLY 107

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>MDTK_YERPE (Q8ZDZ8) Multidrug resistance protein mdtK (Multidrug-efflux|
           transporter)
          Length = 457

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
 Frame = +3

Query: 231 PTITEQVKEPAATVGGAEVNQRASPVPEAAKGAGMADWAP-VFIGLVLFILLSPGLLLQI 407
           P +  Q+ + A  V    +    S    AA   G + W P +  G  L + L+P  + Q+
Sbjct: 17  PVVIAQLSQTAMGVVDTIMAGSVSATDMAAVAVGTSIWLPAILFGHGLLLALTP-TVAQL 75

Query: 408 PGKGRMVEFGNFQTSG------ISILVHAVIY 485
            G GR  +  +    G      +S+L+  V+Y
Sbjct: 76  NGSGRRSQIAHQVRQGFWLALCVSVLIMLVLY 107

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>BIOH_NITEU (Q82SL8) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis|
           protein bioH)
          Length = 252

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
 Frame = +1

Query: 67  HVRSVWKG----MVHGW*PYASVWDPVPTSRPSPEGHIYTVTLPRH 192
           H+ +   G    M+HGW  ++ VWD V  S  S    ++ V LP H
Sbjct: 5   HIETTGNGPDLVMLHGWAMHSGVWDGVVESL-SQRFRLHQVDLPGH 49

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>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 428 HHPALAGDLEQQPRREEDEEHQPDEHRRP 342
           HHP    +   +P  EE   H P+EH  P
Sbjct: 64  HHP----EEHHEPHHEEHHHHHPEEHHEP 88

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>BCL2_HUMAN (P10415) Apoptosis regulator Bcl-2|
          Length = 239

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 18/51 (35%), Positives = 22/51 (43%)
 Frame = -1

Query: 418 PLPGIWSSSPGERRMKSTSPMNTGAQSAMPAPLAASGTGLAR*LTSAPPTV 266
           P PGI+SS PG     + S       S +  P AA G      L+  PP V
Sbjct: 44  PAPGIFSSQPGHTPHPAASRDPVARTSPLQTP-AAPGAAAGPALSPVPPVV 93

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>IF2_RALEJ (Q46ZP1) Translation initiation factor IF-2|
          Length = 966

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = -3

Query: 470 DEYGDAAGLEVAELHHPALAGDLEQQPRREEDEEHQPDEHRR 345
           DE G     E A+ H  ALA +  +Q RREE+E  Q  E  R
Sbjct: 101 DEAGADQHNEAADQH--ALAAEAAEQARREEEERQQAAELAR 140

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>YNG2_YARLI (Q6C5V7) Chromatin modification-related protein YNG2 (ING1 homolog|
           2)
          Length = 283

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = -1

Query: 400 SSSPGERRMKSTSPMNTGAQSAMPAPLAASGTGLAR*LTSAPPTVAAGSFTCSVIVGP 227
           SS+PG R  K  +       ++M      S  G +  L + P TVA GS   ++  GP
Sbjct: 166 SSTPGTRPPKKRATDKNNEAASMSKE---SSVGASEQLRNMPETVAVGSLDAAIRAGP 220

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>KHSE_BACCR (Q81EK4) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)|
          Length = 297

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
 Frame = +2

Query: 11  PRLFPEELASKRTACADEHTSGACGKAWCTGGDRMRR------FGILCPPVVPRLKAIYT 172
           P++FP   A K +A ++   +  C K W   G+ M R      + +   P++P ++    
Sbjct: 177 PKMFPFHEAVKASAISNVLVAALCQKRWEVVGEMMERDHFHEPYRLELVPLLPSIRKCAK 236

Query: 173 QSHSHATLMS 202
           +  ++ T +S
Sbjct: 237 EFGAYGTALS 246

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>HXK1_MOUSE (P17710) Hexokinase-1 (EC 2.7.1.1) (Hexokinase type I) (HK I)|
           (Hexokinase, tumor isozyme)
          Length = 974

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -3

Query: 431 LHHPALAGDLEQQPRREEDEEHQPDEHRRPV 339
           LH P  AG+    P R+   E+   E RRP+
Sbjct: 12  LHGPGQAGETSPVPERQSGSENPASEDRRPL 42

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>HNRPU_HUMAN (Q00839) Heterogenous nuclear ribonucleoprotein U (hnRNP U)|
           (Scaffold attachment factor A) (SAF-A) (p120) (pp120)
          Length = 824

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -3

Query: 473 VDEYGDAAGLEVAELHHPALAGDLEQQPRREEDEE 369
           +D  GD+AG   A L   A AG  E++   EE+EE
Sbjct: 60  LDLGGDSAGRSGAGLEQEAAAGGDEEEEEEEEEEE 94


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,161,739
Number of Sequences: 219361
Number of extensions: 1660779
Number of successful extensions: 6934
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 6460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6910
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result