ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd25g04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1257 bits (634), Expect = 0.0 Identities = 651/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 119947 accttttaaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 119889 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119888 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 119829 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119828 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 119769 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119768 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 119709 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119708 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 119649 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119648 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 119589 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119588 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 119529 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119528 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 119469 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119468 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 119409 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119408 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 119349 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119348 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 119295 Score = 1257 bits (634), Expect = 0.0 Identities = 651/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 94947 accttttaaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 95005 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95006 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 95065 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95066 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 95125 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95126 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 95185 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95186 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 95245 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95246 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 95305 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95306 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 95365 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95366 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 95425 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95426 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 95485 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95486 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 95545 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95546 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 95599
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 118728 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 118670 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118669 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 118610 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118609 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 118550 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118549 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 118490 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118489 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 118430 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118429 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 118370 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118369 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 118310 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118309 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 118250 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118249 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 118190 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118189 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 118130 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118129 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 118076
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 119812 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 119754 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119753 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 119694 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119693 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 119634 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119633 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 119574 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119573 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 119514 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119513 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 119454 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119453 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 119394 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119393 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 119334 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119333 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 119274 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119273 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 119214 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119213 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 119160 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 95344 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 95402 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95403 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 95462 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95463 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 95522 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95523 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 95582 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95583 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 95642 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95643 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 95702 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95703 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 95762 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95763 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 95822 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95823 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 95882 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95883 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 95942 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95943 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 95996
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 119812 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 119754 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119753 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 119694 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119693 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 119634 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119633 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 119574 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119573 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 119514 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119513 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 119454 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119453 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 119394 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119393 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 119334 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119333 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 119274 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119273 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 119214 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119213 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 119160 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 95344 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 95402 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95403 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 95462 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95463 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 95522 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95523 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 95582 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95583 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 95642 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95643 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 95702 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95703 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 95762 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95763 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 95822 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95823 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 95882 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95883 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 95942 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95943 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 95996
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 119761 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 119703 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119702 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 119643 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119642 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 119583 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119582 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 119523 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119522 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 119463 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119462 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 119403 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119402 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 119343 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119342 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 119283 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119282 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 119223 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119222 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 119163 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119162 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 119109 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 95289 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 95347 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95348 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 95407 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95408 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 95467 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95468 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 95527 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95528 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 95587 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95588 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 95647 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95648 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 95707 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95708 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 95767 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95768 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 95827 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95828 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 95887 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95888 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 95941
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 31507922 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 31507980 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507981 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 31508040 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508041 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 31508100 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508101 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 31508160 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508161 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 31508220 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508221 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 31508280 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508281 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 31508340 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508341 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 31508400 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508401 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 31508460 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508461 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 31508520 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508521 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 31508574
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 84674 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 84616 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84615 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 84556 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84555 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 84496 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84495 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 84436 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84435 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 84376 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84375 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 84316 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84315 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 84256 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84255 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 84196 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84195 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 84136 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84135 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 84076 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84075 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 84022
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 119781 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 119723 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119722 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 119663 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119662 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 119603 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119602 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 119543 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119542 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 119483 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119482 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 119423 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119422 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 119363 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119362 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 119303 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119302 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 119243 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119242 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 119183 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119182 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 119129 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 95337 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 95395 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95396 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 95455 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95456 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 95515 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95516 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 95575 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95576 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 95635 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95636 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 95695 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95696 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 95755 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95756 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 95815 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95816 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 95875 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95876 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 95935 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95936 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 95989
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 58500 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 58442 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58441 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 58382 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58381 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 58322 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58321 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 58262 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58261 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 58202 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58201 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 58142 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58141 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 58082 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58081 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 58022 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58021 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 57962 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57961 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 57902 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57901 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 57848
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 9268271 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 9268329 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268330 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 9268389 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268390 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 9268449 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268450 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 9268509 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268510 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 9268569 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268570 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 9268629 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268630 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 9268689 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268690 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 9268749 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268750 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 9268809 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268810 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 9268869 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268870 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 9268923 Score = 1233 bits (622), Expect = 0.0 Identities = 648/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 9227771 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 9227829 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227830 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 9227889 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227890 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 9227949 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227950 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 9228009 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228010 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 9228069 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228070 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 9228129 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228130 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 9228189 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228190 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 9228249 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228250 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 9228309 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9228310 tcatagggcgattgtcactgcttatggacccgaacctaggtgatctatccatgaccagga 9228369 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228370 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 9228423 Score = 1233 bits (622), Expect = 0.0 Identities = 648/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 9056185 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 9056243 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056244 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 9056303 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056304 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 9056363 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056364 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 9056423 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 9056424 ctagcttacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaag 9056483 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056484 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 9056543 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056544 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 9056603 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056604 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 9056663 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056664 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 9056723 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056724 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 9056783 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056784 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 9056837 Score = 1217 bits (614), Expect = 0.0 Identities = 647/654 (98%), Gaps = 3/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 9164360 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 9164418 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164419 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 9164478 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164479 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 9164538 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164539 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 9164598 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164599 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 9164658 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164659 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 9164718 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164719 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 9164778 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164779 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 9164838 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164839 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 9164898 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 9164899 tcatagggcgattgtcactgcttatggacccgaa-ctaggtgatctatccatgaccagga 9164957 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164958 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 9165011 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 334 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 393 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 394 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 440 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 19938256 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 19938314 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938315 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 19938374 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938375 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 19938434 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938435 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 19938494 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938495 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 19938554 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938555 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 19938614 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938615 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 19938674 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938675 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 19938734 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938735 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 19938794 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938795 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 19938854 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938855 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 19938908 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 10277175 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 10277117 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277116 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 10277057 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277056 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 10276997 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276996 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 10276937 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276936 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 10276877 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276876 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 10276817 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276816 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 10276757 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276756 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 10276697 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276696 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 10276637 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276636 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 10276577 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276576 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 10276523 Score = 1233 bits (622), Expect = 0.0 Identities = 648/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 10387123 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 10387181 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387182 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 10387241 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387242 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 10387301 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387302 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 10387361 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387362 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 10387421 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387422 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 10387481 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387482 aaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 10387541 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387542 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 10387601 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387602 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 10387661 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387662 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 10387721 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387722 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 10387775 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 352 agtaccgtgagggaaaggtgaaaagaacccc 382 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 177 ttgtgctgctaggcgaagcggttgagtgc 205 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 31598438 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 31598496 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598497 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 31598556 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598557 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 31598616 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598617 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 31598676 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598677 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 31598736 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598737 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 31598796 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598797 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 31598856 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598857 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 31598916 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598917 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 31598976 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598977 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 31599036 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599037 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 31599090
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 33525754 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 33525812 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525813 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 33525872 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525873 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 33525932 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525933 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 33525992 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525993 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 33526052 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526053 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 33526112 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526113 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 33526172 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526173 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 33526232 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526233 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 33526292 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526293 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 33526352 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526353 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 33526406 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 356 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 415 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 416 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 475 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 476 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 194 bits (98), Expect = 3e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 370 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 429 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 430 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 479 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 336 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 382 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 336 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 382 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 363 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 401 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 47787 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 47729 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47728 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 47669 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47668 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 47609 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47608 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 47549 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47548 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 47489 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47488 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 47429 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47428 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 47369 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47368 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 47309 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47308 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 47249 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47248 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 47189 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47188 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 47135
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 70951 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 71009 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71010 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 71069 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71070 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 71129 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71130 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 71189 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71190 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 71249 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71250 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 71309 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71310 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 71369 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71370 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 71429 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71430 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 71489 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71490 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 71549 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71550 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 71603 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 336 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 382 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 336 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 382 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 123 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 181 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 241 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 301 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 361 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 421 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 481 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 541 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 542 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 601 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 602 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 661 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 721 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 775
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 30 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 88 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 148 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 208 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 268 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 328 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 388 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 448 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 508 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 568 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 628 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 682
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 19949532 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 19949590 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949591 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 19949650 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949651 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 19949710 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949711 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 19949770 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949771 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 19949830 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949831 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 19949890 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949891 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 19949950 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949951 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 19950010 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950011 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 19950070 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950071 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 19950130 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950131 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 19950184 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 10283214 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 10283156 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283155 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 10283096 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283095 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 10283036 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283035 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 10282976 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282975 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 10282916 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282915 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 10282856 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282855 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 10282796 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282795 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 10282736 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282735 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 10282676 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282675 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 10282616 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282615 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 10282562 Score = 1233 bits (622), Expect = 0.0 Identities = 648/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 10393162 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 10393220 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393221 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 10393280 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393281 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 10393340 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393341 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 10393400 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393401 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 10393460 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393461 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 10393520 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393521 aaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 10393580 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393581 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 10393640 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393641 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 10393700 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393701 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 10393760 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393761 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 10393814 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 336 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 382 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 177 ttgtgctgctaggcgaagcggttgagtgc 205 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 119755 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 119697 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119696 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 119637 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119636 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 119577 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119576 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 119517 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119516 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 119457 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119456 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 119397 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119396 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 119337 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119336 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 119277 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119276 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 119217 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119216 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 119157 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119156 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 119103 Score = 1241 bits (626), Expect = 0.0 Identities = 649/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 95284 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 95342 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95343 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 95402 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95403 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 95462 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95463 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 95522 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95523 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 95582 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95583 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 95642 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95643 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 95702 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95703 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 95762 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95763 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 95822 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95823 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 95882 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95883 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 95936
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1233 bits (622), Expect = 0.0 Identities = 648/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 858 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 800 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 799 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 740 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 680 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 679 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 620 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 619 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 560 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 500 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 440 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 380 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 379 cataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtct 320 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 319 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 260 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 206
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1233 bits (622), Expect = 0.0 Identities = 648/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 14111 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 14169 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14170 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 14229 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14230 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 14289 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14290 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 14349 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 14350 ctagcttacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaag 14409 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14410 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 14469 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14470 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 14529 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14530 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 14589 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14590 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 14649 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14650 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 14709 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14710 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 14763 Score = 1217 bits (614), Expect = 0.0 Identities = 647/654 (98%), Gaps = 3/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 122386 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 122444 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122445 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 122504 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122505 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 122564 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122565 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 122624 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122625 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 122684 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122685 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 122744 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122745 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 122804 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122805 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 122864 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122865 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 122924 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 122925 tcatagggcgattgtcactgcttatggacccgaa-ctaggtgatctatccatgaccagga 122983 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122984 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 123037
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1233 bits (622), Expect = 0.0 Identities = 648/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 140919 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 140977 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140978 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 141037 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141038 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 141097 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141098 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 141157 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 141158 ctagcttacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaag 141217 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141218 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 141277 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141278 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 141337 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141338 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 141397 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141398 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 141457 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141458 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 141517 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141518 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 141571
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1233 bits (622), Expect = 0.0 Identities = 648/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 93515 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 93573 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93574 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 93633 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93634 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 93693 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93694 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 93753 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93754 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 93813 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93814 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 93873 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93874 aaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 93933 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93934 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 93993 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93994 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 94053 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94054 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 94113 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94114 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 94167
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1233 bits (622), Expect = 0.0 Identities = 648/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 20346 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 20404 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20405 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 20464 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20465 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 20524 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20525 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 20584 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20585 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 20644 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20645 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 20704 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20705 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 20764 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20765 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 20824 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 20825 cataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtct 20884 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20885 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 20944 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20945 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 20998 Score = 1217 bits (614), Expect = 0.0 Identities = 646/654 (98%), Gaps = 2/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 44772 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 44714 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44713 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 44654 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44653 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 44594 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44593 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 44534 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44533 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 44474 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44473 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 44414 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44413 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 44354 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44353 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 44294 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||| Sbjct: 44293 cataggcagtggcttggttaagggaatggaaccctccggagccgtagtgaaagcgagtct 44234 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44233 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 44174 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44173 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 44120
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1233 bits (622), Expect = 0.0 Identities = 648/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 1401 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 1343 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1342 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 1283 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 1223 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1222 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 1163 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1162 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 1103 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1102 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 1043 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1042 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 983 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 982 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 923 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 922 cataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtct 863 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 862 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 803 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 749
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1233 bits (622), Expect = 0.0 Identities = 648/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 27579 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 27637 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27638 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 27697 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27698 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 27757 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27758 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 27817 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27818 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 27877 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27878 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 27937 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27938 aaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 27997 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27998 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 28057 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28058 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 28117 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28118 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 28177 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28178 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 28231
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1233 bits (622), Expect = 0.0 Identities = 648/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 123611 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 123553 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123552 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 123493 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123492 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 123433 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123432 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 123373 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123372 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 123313 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123312 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 123253 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123252 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 123193 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123192 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 123133 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 123132 cataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtct 123073 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123072 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 123013 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123012 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 122959 Score = 1233 bits (622), Expect = 0.0 Identities = 648/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 99226 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 99284 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99285 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 99344 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99345 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 99404 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99405 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 99464 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99465 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 99524 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99525 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 99584 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99585 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 99644 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99645 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 99704 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 99705 cataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtct 99764 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99765 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 99824 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99825 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 99878
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1233 bits (622), Expect = 0.0 Identities = 648/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 124328 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 124270 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124269 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 124210 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124209 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 124150 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124149 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 124090 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124089 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 124030 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124029 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 123970 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123969 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 123910 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123909 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 123850 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 123849 cataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtct 123790 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123789 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 123730 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123729 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 123676 Score = 1233 bits (622), Expect = 0.0 Identities = 648/654 (99%), Gaps = 2/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 99903 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 99961 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99962 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 100021 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100022 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 100081 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100082 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 100141 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100142 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 100201 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100202 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 100261 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100262 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 100321 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100322 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 100381 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 100382 cataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtct 100441 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100442 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 100501 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100502 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 100555
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1217 bits (614), Expect = 0.0 Identities = 646/654 (98%), Gaps = 2/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 9242010 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 9241952 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9241951 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaa 9241892 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241891 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 9241832 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241831 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 9241772 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241771 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 9241712 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241711 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 9241652 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241651 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 9241592 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9241591 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgact 9241532 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241531 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 9241472 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241471 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 9241412 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9241411 tgaagcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatca 9241358 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 59 actgaaacatcttagtagccagaggaaaagaaag 92 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1217 bits (614), Expect = 0.0 Identities = 646/654 (98%), Gaps = 2/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 53223 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 53165 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 53164 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaa 53105 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53104 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 53045 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53044 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 52985 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52984 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 52925 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52924 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 52865 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52864 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 52805 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 52804 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgact 52745 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52744 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 52685 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52684 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 52625 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 52624 tgaagcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatca 52571
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1185 bits (598), Expect = 0.0 Identities = 643/654 (98%), Gaps = 3/654 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| |||||||||| |||||| |||||||||||||| ||||||||||||||||||| Sbjct: 123550 accttttgaactgcctgccgaatccatgagcaggcaagag-acaacctggcgaactgaaa 123492 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123491 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 123432 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 123431 tgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgc 123372 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 123371 taggcgaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatca 123312 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123311 ct-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 123253 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123252 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 123193 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123192 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 123133 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123132 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 123073 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 123072 cataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtct 123013 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123012 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 122953 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122952 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 122899 Score = 1185 bits (598), Expect = 0.0 Identities = 643/654 (98%), Gaps = 3/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| |||||||||| |||||| |||||||||||||| ||||||||||||||||||| Sbjct: 99187 accttttgaactgcctgccgaatccatgagcaggcaagag-acaacctggcgaactgaaa 99245 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99246 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 99305 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 99306 tgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgc 99365 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 99366 taggcgaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatca 99425 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99426 ct-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 99484 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99485 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 99544 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99545 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 99604 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99605 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 99664 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 99665 cataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtct 99724 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99725 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 99784 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99785 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 99838
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1185 bits (598), Expect = 0.0 Identities = 643/654 (98%), Gaps = 3/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| |||||||||| |||||| |||||||||||||| ||||||||||||||||||| Sbjct: 5540 accttttgaactgcctgccgaatccatgagcaggcaagag-acaacctggcgaactgaaa 5598 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5599 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 5658 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 5659 tgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgc 5718 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 5719 taggcgaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatca 5778 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5779 ct-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 5837 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5838 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 5897 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5898 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 5957 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5958 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 6017 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 6018 cataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtct 6077 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6078 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 6137 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6138 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 6191
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1185 bits (598), Expect = 0.0 Identities = 643/654 (98%), Gaps = 3/654 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| |||||||||| |||||| |||||||||||||| ||||||||||||||||||| Sbjct: 128 accttttgaactgcctgccgaatccatgagcaggcaagag-acaacctggcgaactgaaa 186 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 246 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 247 tgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgc 306 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 307 taggcgaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatca 366 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 ct-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 425 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 485 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 486 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 545 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 605 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 606 cataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtct 665 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 666 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 725 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 726 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 779
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 1134 bits (572), Expect = 0.0 Identities = 598/604 (99%), Gaps = 2/604 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 26 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 84 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 144 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 204 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcg 264 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 324 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 325 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 384 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 444 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 504 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 505 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 564 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 tcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 624 Query: 606 tgaa 609 |||| Sbjct: 625 tgaa 628
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1118 bits (564), Expect = 0.0 Identities = 570/572 (99%) Strand = Plus / Plus Query: 88 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 148 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 208 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 267 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 268 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 328 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 388 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 420 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 421 ggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgct 480 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 540 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||||| Sbjct: 541 agaggtccgaaccgactgatgttgaagaatca 572
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1114 bits (562), Expect = 0.0 Identities = 568/570 (99%) Strand = Plus / Plus Query: 90 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 150 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 210 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 269 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 270 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 330 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 390 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 450 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 510 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 569 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 421 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctta 480 Query: 570 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 629 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 540 Query: 630 aggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||| Sbjct: 541 aggtccgaaccgactgatgttgaagaatca 570
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1114 bits (562), Expect = 0.0 Identities = 568/570 (99%) Strand = Plus / Plus Query: 90 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 150 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 210 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 269 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 270 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 330 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 390 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 450 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 510 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 569 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 421 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctta 480 Query: 570 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 629 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 540 Query: 630 aggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||||| Sbjct: 541 aggtccgaaccgactgatgttgaagaatca 570
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1112 bits (561), Expect = 0.0 Identities = 567/569 (99%) Strand = Plus / Plus Query: 91 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 151 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 211 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 270 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 271 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 331 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 391 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 423 Query: 511 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 570 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 424 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 483 Query: 571 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 543 Query: 631 ggtccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||||||| Sbjct: 544 ggtccgaaccgactgatgttgaagaatca 572
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 1108 bits (559), Expect = 0.0 Identities = 565/567 (99%) Strand = Plus / Plus Query: 93 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 153 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 213 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 272 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 273 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 333 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 393 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 453 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 420 Query: 513 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 572 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 421 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatgg 480 Query: 573 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 632 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 540 Query: 633 tccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||||| Sbjct: 541 tccgaaccgactgatgttgaagaatca 567
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1104 bits (557), Expect = 0.0 Identities = 566/569 (99%) Strand = Plus / Plus Query: 91 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 151 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 211 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 270 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 271 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 331 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 391 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 Query: 511 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 570 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 421 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 480 Query: 571 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 630 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 481 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaaccaagcaga 540 Query: 631 ggtccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||||||| Sbjct: 541 ggtccgaaccgactgatgttgaagaatca 569
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 1011 bits (510), Expect = 0.0 Identities = 610/640 (95%), Gaps = 10/640 (1%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 134085 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 134027 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134026 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 133967 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 133966 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtg 133907 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 || ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 133906 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 133847 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133846 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 133787 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133786 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 133727 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 439 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 133726 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 133670 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133669 aatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 133610 Query: 500 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 559 |||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 133609 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 133555 Query: 560 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 133554 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtga 133495 Query: 620 aactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 133494 aactaagtggaggtccgaaccgactgatgttgaagaatca 133455 Score = 1011 bits (510), Expect = 0.0 Identities = 610/640 (95%), Gaps = 10/640 (1%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 103886 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 103944 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103945 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 104004 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 104005 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtg 104064 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 || ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 104065 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 104124 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104125 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 104184 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104185 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 104244 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 439 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104245 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 104301 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104302 aatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 104361 Query: 500 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 559 |||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 104362 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 104416 Query: 560 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104417 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtga 104476 Query: 620 aactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 104477 aactaagtggaggtccgaaccgactgatgttgaagaatca 104516
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 995 bits (502), Expect = 0.0 Identities = 608/640 (95%), Gaps = 10/640 (1%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 139448 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 139390 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139389 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139330 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 139329 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtg 139270 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 |||| | |||||||||||||| | |||||||||||||||||||||||| ||||| ||||| Sbjct: 139269 gagtactgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctct 139210 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139209 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 139150 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139149 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 139090 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 439 ||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| | Sbjct: 139089 ccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggag 139033 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139032 aatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 138973 Query: 500 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 559 |||||||| |||||||||||||||| ||||||||||||||||| ||||||| |||| Sbjct: 138972 tggttaag-----ggaacccaccggagccatagcgaaagcgagtcttcatagggcaattg 138918 Query: 560 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 138917 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtga 138858 Query: 620 aactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 138857 aactaagtggaggtccgaaccgactgatgttgaagaatca 138818 Score = 995 bits (502), Expect = 0.0 Identities = 608/640 (95%), Gaps = 10/640 (1%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 110497 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 110555 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110556 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 110615 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 110616 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtg 110675 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 |||| | |||||||||||||| | |||||||||||||||||||||||| ||||| ||||| Sbjct: 110676 gagtactgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctct 110735 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110736 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 110795 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110796 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 110855 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 439 ||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| | Sbjct: 110856 ccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggag 110912 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110913 aatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 110972 Query: 500 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 559 |||||||| |||||||||||||||| ||||||||||||||||| ||||||| |||| Sbjct: 110973 tggttaag-----ggaacccaccggagccatagcgaaagcgagtcttcatagggcaattg 111027 Query: 560 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 111028 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtga 111087 Query: 620 aactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 111088 aactaagtggaggtccgaaccgactgatgttgaagaatca 111127
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 995 bits (502), Expect = 0.0 Identities = 608/640 (95%), Gaps = 10/640 (1%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 141970 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 141912 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141911 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 141852 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 141851 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtt 141792 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 |||| | |||||||||||||| | ||||||||| |||||||||||||| ||||| ||||| Sbjct: 141791 gagtactgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctct 141732 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 141731 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaag 141672 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141671 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 141612 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 439 ||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| | Sbjct: 141611 ccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggag 141555 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141554 aatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 141495 Query: 500 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 559 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 141494 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 141440 Query: 560 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 141439 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtga 141380 Query: 620 aactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 141379 aactaagtggaggtccgaaccgactgatgttgaagaatca 141340 Score = 995 bits (502), Expect = 0.0 Identities = 608/640 (95%), Gaps = 10/640 (1%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 111687 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 111745 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111746 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 111805 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 111806 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtt 111865 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 |||| | |||||||||||||| | ||||||||| |||||||||||||| ||||| ||||| Sbjct: 111866 gagtactgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctct 111925 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 111926 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaag 111985 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111986 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 112045 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 439 ||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| | Sbjct: 112046 ccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggag 112102 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112103 aatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 112162 Query: 500 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 559 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 112163 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 112217 Query: 560 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 112218 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtga 112277 Query: 620 aactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 112278 aactaagtggaggtccgaaccgactgatgttgaagaatca 112317
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 995 bits (502), Expect = 0.0 Identities = 608/640 (95%), Gaps = 10/640 (1%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 127726 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 127668 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 127667 gaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaa 127608 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 127607 accgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtg 127548 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 |||||| |||||||||||||| | |||||||||||||||| ||||||||||||| ||||| Sbjct: 127547 gagtgctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctct 127488 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127487 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 127428 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127427 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 127368 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 439 ||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||| | Sbjct: 127367 ccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaagcagtgggaggag 127311 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127310 aatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 127251 Query: 500 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 559 |||||||||||| |||||| |||||||||||||||||||||| |||||||||||| Sbjct: 127250 tggttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttcatagggcgattg 127196 Query: 560 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 127195 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtga 127136 Query: 620 aactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 127135 aactaagtggaggtccgaaccgactgatgttgaagaatca 127096 Score = 995 bits (502), Expect = 0.0 Identities = 608/640 (95%), Gaps = 10/640 (1%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 107196 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 107254 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 107255 gaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaa 107314 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107315 accgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtg 107374 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 |||||| |||||||||||||| | |||||||||||||||| ||||||||||||| ||||| Sbjct: 107375 gagtgctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctct 107434 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107435 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 107494 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107495 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 107554 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 439 ||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||| | Sbjct: 107555 ccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaagcagtgggaggag 107611 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107612 aatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 107671 Query: 500 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 559 |||||||||||| |||||| |||||||||||||||||||||| |||||||||||| Sbjct: 107672 tggttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttcatagggcgattg 107726 Query: 560 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107727 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtga 107786 Query: 620 aactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 107787 aactaagtggaggtccgaaccgactgatgttgaagaatca 107826
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 989 bits (499), Expect = 0.0 Identities = 544/560 (97%), Gaps = 13/560 (2%) Strand = Plus / Minus Query: 105 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 165 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 225 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 284 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 285 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 339 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 340 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 400 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 459 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 460 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 519 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 75067 Query: 520 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 579 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 75066 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 75007 Query: 580 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 639 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75006 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 74947 Query: 640 cgactgatgttgaagaatca 659 |||||||||||||||||||| Sbjct: 74946 cgactgatgttgaagaatca 74927 Score = 167 bits (84), Expect = 6e-38 Identities = 101/104 (97%), Gaps = 2/104 (1%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 75587 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 75529 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgta 109 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75528 catcttagtagccagaggaaaagaaagcaaaagcgattcccgta 75485 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 336 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 382 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860 Score = 58.0 bits (29), Expect = 4e-05 Identities = 39/41 (95%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 35 gcaggcaagagtacaacctggcgaactgaaacatcttagta 75 ||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagag-acaacctagcgaactgaaacatcttagta 430342
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 989 bits (499), Expect = 0.0 Identities = 544/560 (97%), Gaps = 13/560 (2%) Strand = Plus / Plus Query: 105 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 165 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 225 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 284 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 285 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 339 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 340 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 400 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 459 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 460 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 519 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 382471 Query: 520 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 579 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 382472 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 382531 Query: 580 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 639 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382532 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 382591 Query: 640 cgactgatgttgaagaatca 659 |||||||||||||||||||| Sbjct: 382592 cgactgatgttgaagaatca 382611 Score = 167 bits (84), Expect = 6e-38 Identities = 101/104 (97%), Gaps = 2/104 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 381951 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 382009 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgta 109 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382010 catcttagtagccagaggaaaagaaagcaaaagcgattcccgta 382053 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 336 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 382 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 336 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 382 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867 Score = 58.0 bits (29), Expect = 4e-05 Identities = 39/41 (95%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 35 gcaggcaagagtacaacctggcgaactgaaacatcttagta 75 ||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagag-acaacctagcgaactgaaacatcttagta 254081 Score = 58.0 bits (29), Expect = 4e-05 Identities = 39/41 (95%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 35 gcaggcaagagtacaacctggcgaactgaaacatcttagta 75 ||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagag-acaacctagcgaactgaaacatcttagta 125389
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 989 bits (499), Expect = 0.0 Identities = 544/560 (97%), Gaps = 13/560 (2%) Strand = Plus / Minus Query: 105 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 165 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 225 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 284 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 285 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 339 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 340 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 400 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 459 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 460 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 519 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 113158 Query: 520 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 579 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 113157 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 113098 Query: 580 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 639 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113097 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 113038 Query: 640 cgactgatgttgaagaatca 659 |||||||||||||||||||| Sbjct: 113037 cgactgatgttgaagaatca 113018 Score = 167 bits (84), Expect = 6e-38 Identities = 101/104 (97%), Gaps = 2/104 (1%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 113678 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 113620 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgta 109 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113619 catcttagtagccagaggaaaagaaagcaaaagcgattcccgta 113576 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 336 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 382 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494 Score = 58.0 bits (29), Expect = 4e-05 Identities = 39/41 (95%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 35 gcaggcaagagtacaacctggcgaactgaaacatcttagta 75 ||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagag-acaacctagcgaactgaaacatcttagta 323029
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 989 bits (499), Expect = 0.0 Identities = 544/560 (97%), Gaps = 13/560 (2%) Strand = Plus / Minus Query: 105 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 165 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 225 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 284 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 285 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 339 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 340 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 400 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 459 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 460 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 519 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 367840 Query: 520 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 579 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 367839 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 367780 Query: 580 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 639 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367779 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 367720 Query: 640 cgactgatgttgaagaatca 659 |||||||||||||||||||| Sbjct: 367719 cgactgatgttgaagaatca 367700 Score = 989 bits (499), Expect = 0.0 Identities = 544/560 (97%), Gaps = 13/560 (2%) Strand = Plus / Minus Query: 105 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 165 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 225 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 284 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 285 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 339 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 340 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 400 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 459 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 460 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 519 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 184445 Query: 520 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 579 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 184444 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 184385 Query: 580 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 639 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184384 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 184325 Query: 640 cgactgatgttgaagaatca 659 |||||||||||||||||||| Sbjct: 184324 cgactgatgttgaagaatca 184305 Score = 167 bits (84), Expect = 6e-38 Identities = 101/104 (97%), Gaps = 2/104 (1%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 368360 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 368302 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgta 109 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368301 catcttagtagccagaggaaaagaaagcaaaagcgattcccgta 368258 Score = 167 bits (84), Expect = 6e-38 Identities = 101/104 (97%), Gaps = 2/104 (1%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 184965 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 184907 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgta 109 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184906 catcttagtagccagaggaaaagaaagcaaaagcgattcccgta 184863 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 336 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 382 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329 Score = 58.0 bits (29), Expect = 4e-05 Identities = 39/41 (95%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 35 gcaggcaagagtacaacctggcgaactgaaacatcttagta 75 ||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagag-acaacctagcgaactgaaacatcttagta 295858
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 985 bits (497), Expect = 0.0 Identities = 607/640 (94%), Gaps = 14/640 (2%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 134843 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 134785 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134784 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 134725 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 134724 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtg 134665 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 |||||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||| Sbjct: 134664 gagtgctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttct 134605 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134604 aacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 134545 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134544 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 134485 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 439 ||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| | Sbjct: 134484 ccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggag 134428 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134427 aa----atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 134372 Query: 500 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 559 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 134371 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 134317 Query: 560 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134316 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtga 134257 Query: 620 aactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 134256 aactaagtggaggtccgaaccgactgatgttgaagaatca 134217 Score = 985 bits (497), Expect = 0.0 Identities = 607/640 (94%), Gaps = 14/640 (2%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105439 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 105497 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105498 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 105557 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 105558 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtg 105617 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 |||||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||| Sbjct: 105618 gagtgctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttct 105677 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105678 aacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 105737 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105738 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 105797 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 439 ||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| | Sbjct: 105798 ccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggag 105854 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105855 aa----atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 105910 Query: 500 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 559 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 105911 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 105965 Query: 560 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 105966 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtga 106025 Query: 620 aactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 106026 aactaagtggaggtccgaaccgactgatgttgaagaatca 106065
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 977 bits (493), Expect = 0.0 Identities = 618/654 (94%), Gaps = 13/654 (1%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 136466 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 136409 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136408 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 136349 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 136348 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 136289 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 ||||||||||||| |||||| |||||||||||||| | |||||||||||||||||||||| Sbjct: 136288 taggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatca 136229 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136228 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 136169 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136168 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 136109 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 136108 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 136052 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 136051 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 135994 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135993 cataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 135939 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135938 tcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 135879 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 135878 tgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 135825 Score = 977 bits (493), Expect = 0.0 Identities = 618/654 (94%), Gaps = 13/654 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 105959 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 106016 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106017 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 106076 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106077 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 106136 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 ||||||||||||| |||||| |||||||||||||| | |||||||||||||||||||||| Sbjct: 106137 taggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatca 106196 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106197 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 106256 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106257 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 106316 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 106317 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 106373 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 106374 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 106431 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106432 cataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 106486 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106487 tcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 106546 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 106547 tgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 106600
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 967 bits (488), Expect = 0.0 Identities = 617/654 (94%), Gaps = 12/654 (1%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 132650 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 132593 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132592 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 132533 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 132532 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 132473 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 132472 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 132413 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132412 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 132353 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132352 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 132293 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 132292 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 132236 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||| | | | |||||||||||||||||||||||||||||||||||||| Sbjct: 132235 agcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgact 132177 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 132176 cataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 132122 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132121 tcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 132062 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 132061 tgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 132008 Score = 967 bits (488), Expect = 0.0 Identities = 617/654 (94%), Gaps = 12/654 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 104228 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 104285 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104286 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 104345 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 104346 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 104405 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 104406 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 104465 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104466 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 104525 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104526 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 104585 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 104586 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 104642 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||| | | | |||||||||||||||||||||||||||||||||||||| Sbjct: 104643 agcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgact 104701 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 104702 cataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 104756 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104757 tcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 104816 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 104817 tgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 104870
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 967 bits (488), Expect = 0.0 Identities = 617/654 (94%), Gaps = 12/654 (1%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 132643 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 132586 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132585 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 132526 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 132525 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 132466 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 132465 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 132406 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132405 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 132346 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132345 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 132286 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 132285 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 132229 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||| | | | |||||||||||||||||||||||||||||||||||||| Sbjct: 132228 agcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgact 132170 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 132169 cataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 132115 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132114 tcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 132055 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 132054 tgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 132001 Score = 967 bits (488), Expect = 0.0 Identities = 617/654 (94%), Gaps = 12/654 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 104226 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 104283 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104284 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 104343 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 104344 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 104403 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 104404 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 104463 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104464 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 104523 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104524 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 104583 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 104584 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 104640 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||| | | | |||||||||||||||||||||||||||||||||||||| Sbjct: 104641 agcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgact 104699 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 104700 cataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 104754 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104755 tcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 104814 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 104815 tgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 104868
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 959 bits (484), Expect = 0.0 Identities = 616/654 (94%), Gaps = 12/654 (1%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 131542 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 131485 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131484 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 131425 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 131424 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 131365 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 131364 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 131305 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131304 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 131245 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131244 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 131185 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 131184 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 131128 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||| | | | |||||||||||||||||||||||||||||||||||||| Sbjct: 131127 agcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgact 131069 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 131068 cataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 131014 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131013 tcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 130954 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 130953 tgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 130900 Score = 959 bits (484), Expect = 0.0 Identities = 616/654 (94%), Gaps = 12/654 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 103093 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 103150 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103151 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 103210 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 103211 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 103270 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 103271 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 103330 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103331 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 103390 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103391 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 103450 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 103451 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 103507 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||| | | | |||||||||||||||||||||||||||||||||||||| Sbjct: 103508 agcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgact 103566 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 103567 cataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 103621 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103622 tcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 103681 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 103682 tgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 103735
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 959 bits (484), Expect = 0.0 Identities = 616/654 (94%), Gaps = 12/654 (1%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| |||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 132873 accttttgaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 132816 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132815 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 132756 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 132755 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgc 132696 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 ||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 132695 taggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatca 132636 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132635 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 132576 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132575 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 132516 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 132515 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 132459 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||| | || |||||||||||||||||||||||||||||||||||||| Sbjct: 132458 agcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgact 132400 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 132399 cataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 132345 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132344 tcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatgaccagga 132285 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||| |||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 132284 tgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatca 132231 Score = 959 bits (484), Expect = 0.0 Identities = 616/654 (94%), Gaps = 12/654 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| |||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 103891 accttttgaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 103948 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103949 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 104008 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 104009 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgc 104068 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 ||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 104069 taggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatca 104128 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104129 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 104188 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104189 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 104248 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 104249 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 104305 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||| | || |||||||||||||||||||||||||||||||||||||| Sbjct: 104306 agcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgact 104364 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 104365 cataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 104419 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104420 tcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatgaccagga 104479 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||| |||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 104480 tgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatca 104533
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 959 bits (484), Expect = 0.0 Identities = 504/508 (99%), Gaps = 2/508 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 120 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 178 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 238 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 298 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 358 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 418 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 478 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 538 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 598 Query: 486 cataggcagtggcttggttaagggaacg 513 |||||||||||||||||||||||||||| Sbjct: 599 cataggcagtggcttggttaagggaacg 626
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 952 bits (480), Expect = 0.0 Identities = 605/641 (94%), Gaps = 13/641 (2%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 136162 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 136104 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136103 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 136044 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 136043 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 135984 Query: 200 -gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135983 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 135924 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135923 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 135864 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135863 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135804 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 135803 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 135747 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135746 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 135689 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 135688 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 135634 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135633 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 135574 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 135573 aaactaagtggaggtccgaaccgactgatgttgaagaatca 135533 Score = 952 bits (480), Expect = 0.0 Identities = 605/641 (94%), Gaps = 13/641 (2%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106468 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 106526 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106527 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 106586 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 106587 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 106646 Query: 200 -gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106647 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 106706 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106707 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 106766 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106767 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106826 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 106827 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 106883 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106884 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106941 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106942 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 106996 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106997 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 107056 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 107057 aaactaagtggaggtccgaaccgactgatgttgaagaatca 107097
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 952 bits (480), Expect = 0.0 Identities = 605/641 (94%), Gaps = 13/641 (2%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 136800 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 136742 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136741 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 136682 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 198 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 136681 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 136622 Query: 199 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 136621 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 136562 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136561 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 136502 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 136501 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 136442 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 136441 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 136385 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136384 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 136327 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 136326 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 136272 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 136271 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 136212 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 136211 aaactaagtggaggtccgaaccgactgatgttgaagaatca 136171 Score = 952 bits (480), Expect = 0.0 Identities = 605/641 (94%), Gaps = 13/641 (2%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106757 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 106815 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106816 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 106875 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 198 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 106876 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 106935 Query: 199 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 106936 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 106995 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106996 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 107055 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107056 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 107115 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 107116 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 107172 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107173 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 107230 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 107231 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 107285 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 107286 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 107345 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 107346 aaactaagtggaggtccgaaccgactgatgttgaagaatca 107386
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 952 bits (480), Expect = 0.0 Identities = 605/641 (94%), Gaps = 13/641 (2%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1662 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 1720 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1721 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 1780 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 1781 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 1840 Query: 200 -gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1841 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 1900 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1901 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 1960 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1961 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 2020 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 2021 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 2077 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2078 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 2135 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 2136 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 2190 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2191 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 2250 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 2251 aaactaagtggaggtccgaaccgactgatgttgaagaatca 2291
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 952 bits (480), Expect = 0.0 Identities = 605/641 (94%), Gaps = 13/641 (2%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135408 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 135350 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135349 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 135290 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 198 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135289 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 135230 Query: 199 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 135229 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 135170 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135169 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 135110 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135109 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135050 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 135049 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 134993 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134992 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 134935 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 134934 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 134880 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134879 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 134820 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 134819 aaactaagtggaggtccgaaccgactgatgttgaagaatca 134779 Score = 952 bits (480), Expect = 0.0 Identities = 605/641 (94%), Gaps = 13/641 (2%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105628 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 105686 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105687 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 105746 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 198 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 105747 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 105806 Query: 199 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 105807 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 105866 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105867 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 105926 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105927 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 105986 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 105987 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 106043 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106044 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106101 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106102 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 106156 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106157 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 106216 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 106217 aaactaagtggaggtccgaaccgactgatgttgaagaatca 106257
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 952 bits (480), Expect = 0.0 Identities = 605/641 (94%), Gaps = 13/641 (2%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135543 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 135485 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135484 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 135425 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 198 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135424 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 135365 Query: 199 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 135364 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 135305 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135304 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 135245 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135244 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135185 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 135184 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 135128 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135127 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 135070 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 135069 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 135015 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135014 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 134955 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 134954 aaactaagtggaggtccgaaccgactgatgttgaagaatca 134914 Score = 952 bits (480), Expect = 0.0 Identities = 605/641 (94%), Gaps = 13/641 (2%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105800 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 105858 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105859 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 105918 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 198 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 105919 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 105978 Query: 199 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 105979 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 106038 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106039 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 106098 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106099 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106158 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 106159 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 106215 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106216 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106273 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106274 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 106328 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106329 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 106388 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 106389 aaactaagtggaggtccgaaccgactgatgttgaagaatca 106429
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 952 bits (480), Expect = 0.0 Identities = 605/641 (94%), Gaps = 13/641 (2%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135541 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 135483 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135482 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 135423 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 198 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135422 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 135363 Query: 199 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 135362 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 135303 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135302 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 135243 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135242 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135183 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 135182 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 135126 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135125 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 135068 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 135067 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 135013 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135012 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 134953 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 134952 aaactaagtggaggtccgaaccgactgatgttgaagaatca 134912 Score = 952 bits (480), Expect = 0.0 Identities = 605/641 (94%), Gaps = 13/641 (2%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105797 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 105855 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105856 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 105915 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 198 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 105916 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 105975 Query: 199 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 105976 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 106035 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106036 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 106095 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106096 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106155 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 106156 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 106212 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106213 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106270 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106271 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 106325 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106326 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 106385 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 106386 aaactaagtggaggtccgaaccgactgatgttgaagaatca 106426
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 952 bits (480), Expect = 0.0 Identities = 605/641 (94%), Gaps = 13/641 (2%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135453 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 135395 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135394 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 135335 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 198 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135334 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 135275 Query: 199 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 135274 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 135215 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135214 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 135155 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135154 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135095 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 135094 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 135038 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135037 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 134980 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 134979 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 134925 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134924 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 134865 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 134864 aaactaagtggaggtccgaaccgactgatgttgaagaatca 134824 Score = 952 bits (480), Expect = 0.0 Identities = 605/641 (94%), Gaps = 13/641 (2%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105675 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 105733 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105734 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 105793 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 198 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 105794 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 105853 Query: 199 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 105854 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 105913 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105914 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 105973 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105974 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106033 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 106034 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 106090 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106091 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106148 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106149 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 106203 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106204 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 106263 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 106264 aaactaagtggaggtccgaaccgactgatgttgaagaatca 106304
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 952 bits (480), Expect = 0.0 Identities = 615/654 (94%), Gaps = 12/654 (1%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| |||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 133834 accttttgaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 133777 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133776 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 133717 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 ||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||| Sbjct: 133716 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgc 133657 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 ||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 133656 taggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatca 133597 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133596 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 133537 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133536 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 133477 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 133476 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 133420 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||| | || |||||||||||||||||||||||||||||||||||||| Sbjct: 133419 agcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgact 133361 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 133360 cataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 133306 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 133305 tcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatgaccagga 133246 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||| |||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 133245 tgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatca 133192 Score = 952 bits (480), Expect = 0.0 Identities = 615/654 (94%), Gaps = 12/654 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| |||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 104815 accttttgaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 104872 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104873 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 104932 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 ||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||| Sbjct: 104933 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgc 104992 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 ||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 104993 taggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatca 105052 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105053 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 105112 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105113 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 105172 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 105173 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 105229 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||| | || |||||||||||||||||||||||||||||||||||||| Sbjct: 105230 agcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgact 105288 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105289 cataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 105343 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 105344 tcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatgaccagga 105403 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||| |||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 105404 tgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatca 105457
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 952 bits (480), Expect = 0.0 Identities = 605/641 (94%), Gaps = 13/641 (2%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 136160 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 136102 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136101 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 136042 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 136041 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 135982 Query: 200 -gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135981 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 135922 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135921 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 135862 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135861 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135802 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 135801 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 135745 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135744 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 135687 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 135686 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 135632 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135631 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 135572 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 135571 aaactaagtggaggtccgaaccgactgatgttgaagaatca 135531 Score = 952 bits (480), Expect = 0.0 Identities = 605/641 (94%), Gaps = 13/641 (2%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106466 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 106524 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106525 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 106584 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 106585 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 106644 Query: 200 -gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106645 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 106704 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106705 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 106764 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106765 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106824 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 106825 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 106881 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106882 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106939 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106940 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 106994 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106995 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 107054 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 107055 aaactaagtggaggtccgaaccgactgatgttgaagaatca 107095
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 952 bits (480), Expect = 0.0 Identities = 605/641 (94%), Gaps = 13/641 (2%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135891 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 135833 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135832 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 135773 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135772 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 135713 Query: 200 -gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135712 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 135653 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135652 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 135593 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135592 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135533 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 135532 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 135476 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135475 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 135418 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 135417 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 135363 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135362 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 135303 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 135302 aaactaagtggaggtccgaaccgactgatgttgaagaatca 135262 Score = 952 bits (480), Expect = 0.0 Identities = 605/641 (94%), Gaps = 13/641 (2%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106247 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 106305 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106306 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 106365 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 106366 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 106425 Query: 200 -gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106426 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 106485 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106486 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 106545 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106546 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106605 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 106606 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 106662 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106663 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106720 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106721 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 106775 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106776 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 106835 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 106836 aaactaagtggaggtccgaaccgactgatgttgaagaatca 106876
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 948 bits (478), Expect = 0.0 Identities = 603/640 (94%), Gaps = 11/640 (1%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 140222 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 140164 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140163 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 140104 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 140103 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcg 140044 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 || ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 140043 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 139984 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139983 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 139924 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 139923 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 139864 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 439 ||||| ||| ||||||||||||| |||||||| | || ||||||||||||||||| | Sbjct: 139863 ccccatcggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag 139807 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 | | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139806 -acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 139748 Query: 500 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 559 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 139747 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 139693 Query: 560 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 139692 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtga 139633 Query: 620 aactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 139632 aactaagtggaggtccgaaccgactgatgttgaagaatca 139593 Score = 948 bits (478), Expect = 0.0 Identities = 603/640 (94%), Gaps = 11/640 (1%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 109838 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 109896 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109897 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 109956 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 109957 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcg 110016 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 || ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 110017 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 110076 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110077 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 110136 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 110137 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 110196 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 439 ||||| ||| ||||||||||||| |||||||| | || ||||||||||||||||| | Sbjct: 110197 ccccatcggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag 110253 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 | | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110254 -acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 110312 Query: 500 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 559 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 110313 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 110367 Query: 560 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 110368 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtga 110427 Query: 620 aactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 110428 aactaagtggaggtccgaaccgactgatgttgaagaatca 110467
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 948 bits (478), Expect = 0.0 Identities = 603/640 (94%), Gaps = 11/640 (1%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 131653 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 131595 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131594 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 131535 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 131534 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtg 131475 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 |||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 131474 gagtgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctct 131415 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131414 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 131355 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 131354 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 131295 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 439 ||||| ||| ||||||||||||| |||||||| | ||||| |||||||||||||||| Sbjct: 131294 ccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagggg 131238 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 | || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131237 gaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 131179 Query: 500 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 559 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 131178 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 131124 Query: 560 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 131123 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtga 131064 Query: 620 aactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 131063 aactaagtggaggtccgaaccgactgatgttgaagaatca 131024 Score = 948 bits (478), Expect = 0.0 Identities = 603/640 (94%), Gaps = 11/640 (1%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 101792 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 101850 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101851 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 101910 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 101911 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtg 101970 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 |||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 101971 gagtgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctct 102030 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102031 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 102090 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 102091 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 102150 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 439 ||||| ||| ||||||||||||| |||||||| | ||||| |||||||||||||||| Sbjct: 102151 ccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagggg 102207 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 | || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102208 gaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 102266 Query: 500 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 559 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 102267 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 102321 Query: 560 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 102322 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtga 102381 Query: 620 aactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 102382 aactaagtggaggtccgaaccgactgatgttgaagaatca 102421
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 944 bits (476), Expect = 0.0 Identities = 614/654 (93%), Gaps = 12/654 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| |||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 124 accttttgaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 181 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 241 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 ||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||| Sbjct: 242 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgc 301 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 ||||||||||||| ||||||||||||||||||||| | |||||||||||||| ||||||| Sbjct: 302 taggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgagagcatca 361 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 421 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 481 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 482 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 538 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||| | || |||||||||||||||||||||||||||||||||||||| Sbjct: 539 agcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgact 597 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 598 cataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 652 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 653 tcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatgaccagga 712 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||| |||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 713 tgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatca 766
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 944 bits (476), Expect = 0.0 Identities = 604/641 (94%), Gaps = 13/641 (2%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135420 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 135362 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135361 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 135302 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 198 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135301 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 135242 Query: 199 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 135241 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 135182 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135181 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 135122 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135121 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135062 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 135061 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 135005 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135004 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggc 134947 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 134946 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 134892 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134891 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 134832 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 134831 aaactaagtggaggtccgaaccgactgatgttgaagaatca 134791 Score = 944 bits (476), Expect = 0.0 Identities = 604/641 (94%), Gaps = 13/641 (2%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105642 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 105700 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105701 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 105760 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 198 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 105761 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 105820 Query: 199 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 105821 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 105880 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105881 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 105940 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105941 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106000 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 106001 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 106057 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106058 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggc 106115 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106116 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 106170 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106171 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 106230 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 106231 aaactaagtggaggtccgaaccgactgatgttgaagaatca 106271
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 942 bits (475), Expect = 0.0 Identities = 501/507 (98%), Gaps = 2/507 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 80 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 138 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 198 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 199 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcagtacaagcgttgtgctgc 258 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 318 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 319 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 378 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 438 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 498 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 agcagtgggaggggaaattgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 Query: 486 cataggcagtggcttggttaagggaac 512 ||||||||||||||||||||||||||| Sbjct: 559 cataggcagtggcttggttaagggaac 585
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 936 bits (472), Expect = 0.0 Identities = 613/654 (93%), Gaps = 12/654 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 106130 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 106187 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106188 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 106247 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106248 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 106307 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||| || ||||| |||||||||||||| | |||||||||||||||||||||| Sbjct: 106308 taggcgaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatca 106367 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106368 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 106427 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 106428 gaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgaggga 106487 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||| ||| Sbjct: 106488 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttcca 106544 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||| | | | | |||||||||||||||||||||||||||||||||||||| Sbjct: 106545 agcagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgact 106603 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106604 cataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 106658 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | || |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106659 tcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 106718 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 106719 tgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 106772 Score = 886 bits (447), Expect = 0.0 Identities = 612/657 (93%), Gaps = 15/657 (2%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 135779 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 135722 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135721 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 135662 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagc-aatacaagcgttgtgctg 184 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 135661 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaatacaagcgtcgtgctg 135602 Query: 185 ctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatc 244 ||||||||||| || ||||| |||||||||||||| | ||||||||||||||||||||| Sbjct: 135601 ctaggcgaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatc 135542 Query: 245 actagcttatg-ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag-c 302 ||||||||| | | |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135541 actagcttacgcccctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcc 135482 Query: 303 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 362 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 135481 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgag 135422 Query: 363 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 422 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | |||| Sbjct: 135421 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctt 135365 Query: 423 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 482 ||||||||||||||| | | | | ||||||||||||||||||||||||||||||||||| Sbjct: 135364 ccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcg 135306 Query: 483 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 542 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 135305 actcataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgag 135251 Query: 543 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 602 |||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135250 tcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 135191 Query: 603 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 135190 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 135134
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 936 bits (472), Expect = 0.0 Identities = 613/654 (93%), Gaps = 12/654 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 133 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 190 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 catcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 250 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 251 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 310 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||| || |||||| |||||||||||||| | |||||||||||||||||||||| Sbjct: 311 taggcgaagcagtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatca 370 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 430 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 490 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 491 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 547 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||| | | | |||||||||||||||||||||||||||||||||||||| Sbjct: 548 agcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgact 606 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 607 cataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 661 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 tcgtagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 721 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 || ||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 722 tggagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 775
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 936 bits (472), Expect = 0.0 Identities = 613/654 (93%), Gaps = 12/654 (1%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 136055 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 135998 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135997 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 135938 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135937 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 135878 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||| || ||||| |||||||||||||| | |||||||||||||||||||||| Sbjct: 135877 taggcgaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatca 135818 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135817 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 135758 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 135757 gaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgaggga 135698 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||| ||| Sbjct: 135697 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttcca 135641 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||| | | | | |||||||||||||||||||||||||||||||||||||| Sbjct: 135640 agcagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgact 135582 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135581 cataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 135527 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | || |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135526 tcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 135467 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 135466 tgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 135413 Score = 936 bits (472), Expect = 0.0 Identities = 613/654 (93%), Gaps = 12/654 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 106352 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 106409 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106410 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 106469 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106470 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 106529 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||| || ||||| |||||||||||||| | |||||||||||||||||||||| Sbjct: 106530 taggcgaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatca 106589 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106590 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 106649 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 106650 gaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgaggga 106709 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||| ||| Sbjct: 106710 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttcca 106766 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||| | | | | |||||||||||||||||||||||||||||||||||||| Sbjct: 106767 agcagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgact 106825 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106826 cataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 106880 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | || |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106881 tcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 106940 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 106941 tgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 106994
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 934 bits (471), Expect = 0.0 Identities = 488/491 (99%), Gaps = 2/491 (0%) Strand = Plus / Plus Query: 15 aactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttag 73 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaacatcttag 59 Query: 74 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 tagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 119 Query: 134 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 179 Query: 194 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 239 Query: 254 tgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 313 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 cgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 299 Query: 314 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 359 Query: 374 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 419 Query: 434 gaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 gaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 479 Query: 494 gtggcttggtt 504 ||||||||||| Sbjct: 480 gtggcttggtt 490
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 930 bits (469), Expect = 0.0 Identities = 614/655 (93%), Gaps = 13/655 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||| |||||||||| Sbjct: 125 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctaacgaactgaaa 182 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc-ggcgagcgaa 124 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 183 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcaggcgagcgaa 242 Query: 125 atgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctg 184 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 243 atgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctg 302 Query: 185 ctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatc 244 |||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 303 ctaggcgaagcggtgaagtgccgaaccctagatggctagagtccagtagccgaaagcatc 362 Query: 245 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 304 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 actagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 422 Query: 305 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 364 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 423 ggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgaggg 482 Query: 365 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 424 || ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||| Sbjct: 483 aagggtgaaaagaacccccaccggggagtgaaatagaacatgaaaccg---taagctccc 539 Query: 425 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 484 ||||||||||||| | | | ||||||||||||||||||||||||||||||||||||| Sbjct: 540 aagcagtgggaggagcctg-gggctctgaccgcgtgcctgttgaagaatgagccggcgac 598 Query: 485 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 544 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 599 tcataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtc 653 Query: 545 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 604 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 654 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 713 Query: 605 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 714 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 768
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 928 bits (468), Expect = 0.0 Identities = 603/641 (94%), Gaps = 14/641 (2%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 113 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 171 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 172 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 231 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 198 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 232 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 291 Query: 199 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 ||| ||| |||||| | ||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 292 tgaatgctgcaccc-atatggcgaaagtccagtagccgaaagcatcactagcttacgctc 350 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 410 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 411 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 470 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 471 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 527 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 528 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 585 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 586 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 640 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 641 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 700 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 701 aaactaagtggaggtccgaaccgactgatgttgaagaatca 741
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 928 bits (468), Expect = 0.0 Identities = 602/641 (93%), Gaps = 13/641 (2%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 142741 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 142683 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142682 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 142623 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| | | Sbjct: 142622 accgtgaaaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagct 142563 Query: 200 g-agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 | ||||| ||||||||||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 142562 ggagtgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctc 142503 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 142502 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaa 142443 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 142442 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 142383 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | ||||||||||||||||||| Sbjct: 142382 cccccatcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggagga 142326 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142325 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 142268 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 142267 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 142213 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142212 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 142153 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 142152 aaactaagcggaggtccgaaccgactgatgttgaagaatca 142112 Score = 928 bits (468), Expect = 0.0 Identities = 602/641 (93%), Gaps = 13/641 (2%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 110587 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 110645 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110646 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 110705 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| | | Sbjct: 110706 accgtgaaaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagct 110765 Query: 200 g-agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 | ||||| ||||||||||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 110766 ggagtgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctc 110825 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 110826 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaa 110885 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 110886 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 110945 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | ||||||||||||||||||| Sbjct: 110946 cccccatcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggagga 111002 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111003 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 111060 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 111061 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 111115 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111116 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 111175 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 111176 aaactaagcggaggtccgaaccgactgatgttgaagaatca 111216
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 920 bits (464), Expect = 0.0 Identities = 601/641 (93%), Gaps = 13/641 (2%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || |||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 139366 ctgctgaatccatgggcagacaagag-acaacctggcgaactgaaacatcttagtagccg 139308 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139307 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139248 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 139247 accgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtg 139188 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 ||||||| |||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 139187 aagtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctct 139128 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139127 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 139068 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 139067 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 139008 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-g 438 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 139007 ccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 138951 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138950 cccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 138893 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 138892 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 138838 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 138837 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 138778 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 138777 aaactaagtggaggtccgaaccgactgatgttgaagaatca 138737 Score = 920 bits (464), Expect = 0.0 Identities = 601/641 (93%), Gaps = 13/641 (2%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || |||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 109731 ctgctgaatccatgggcagacaagag-acaacctggcgaactgaaacatcttagtagccg 109789 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109790 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 109849 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 109850 accgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtg 109909 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 ||||||| |||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 109910 aagtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctct 109969 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109970 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 110029 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 110030 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 110089 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-g 438 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 110090 ccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 110146 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110147 cccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 110204 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 110205 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 110259 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 110260 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 110319 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 110320 aaactaagtggaggtccgaaccgactgatgttgaagaatca 110360
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 916 bits (462), Expect = 0.0 Identities = 602/643 (93%), Gaps = 13/643 (2%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 139575 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 139517 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139516 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139457 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 139456 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtg 139397 Query: 200 -gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 || ||| ||||||||||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 139396 cgaatgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctc 139337 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139336 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 139277 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 139276 ggctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaa 139217 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 139216 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 139160 Query: 439 ga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 496 || | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139159 gactactaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 139100 Query: 497 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga 556 ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 139099 gcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaa 139045 Query: 557 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 616 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139044 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggg 138985 Query: 617 tgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 138984 tgaaactaagtggaggtccgaaccgactgatgttgaagaatca 138942 Score = 916 bits (462), Expect = 0.0 Identities = 602/643 (93%), Gaps = 13/643 (2%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 109724 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 109782 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109783 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 109842 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 109843 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtg 109902 Query: 200 -gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 || ||| ||||||||||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 109903 cgaatgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctc 109962 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109963 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 110022 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 110023 ggctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaa 110082 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 110083 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 110139 Query: 439 ga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 496 || | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110140 gactactaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 110199 Query: 497 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga 556 ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 110200 gcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaa 110254 Query: 557 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 616 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110255 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggg 110314 Query: 617 tgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 110315 tgaaactaagtggaggtccgaaccgactgatgttgaagaatca 110357
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 906 bits (457), Expect = 0.0 Identities = 599/641 (93%), Gaps = 14/641 (2%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 634 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 692 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 752 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 753 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtg 812 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 |||||| | ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 813 gagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctct 872 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 932 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagta-ccgtgagggaaaggtgaaaagaa 378 ||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||| Sbjct: 933 gctaaatactcctgggtgaccgatagccaaatagtacccgtgagggaaaggtgaaaagaa 992 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 993 cccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagga 1049 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1050 gacag---gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 1106 Query: 499 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 558 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 1107 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 1161 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1162 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtg 1221 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||| ||||||||||||||||||||||||||||| Sbjct: 1222 aaactaagtgagggtccgaaccgactgatgttgaagaatca 1262
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 904 bits (456), Expect = 0.0 Identities = 597/640 (93%), Gaps = 13/640 (2%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 146 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 204 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 264 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 265 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtg 324 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 |||||| | ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 325 gagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctct 384 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 444 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 445 gctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaac 504 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 439 ||||| ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| | Sbjct: 505 ccccatcggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggag 561 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 | || |||||| ||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 562 acag---gctctgaacgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggct 618 Query: 500 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 559 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 619 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 673 Query: 560 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 674 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtga 733 Query: 620 aactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||| ||||||||||||||||||||||||||||||| Sbjct: 734 aactaagtggaggtccgaaccgactgatgttgaagaatca 773
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 894 bits (451), Expect = 0.0 Identities = 603/644 (93%), Gaps = 16/644 (2%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 1904 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaccatcttagtagcca 1962 Query: 80 gaggaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaatgggagcagccta 138 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1963 gaggaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagccta 2022 Query: 139 aaccgtgaaaacggggttgtgggagagcaatacaagcgtt-gtgctgctaggcgaagcgg 197 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 2023 aaccgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagcag 2082 Query: 198 tt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgc 256 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2083 cccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgc 2142 Query: 257 tctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgc 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2143 tctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgc 2202 Query: 317 aaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaag 376 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2203 aaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaag 2262 Query: 377 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 436 |||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||||| Sbjct: 2263 aacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggag 2319 Query: 437 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 496 | | || | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2320 gagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 2377 Query: 497 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga 556 ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 2378 gcttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaa 2432 Query: 557 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 616 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2433 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggg 2492 Query: 617 tgaaactaagcaga-ggtccgaaccgactgatgttgaagaatca 659 |||||||||| || ||||||||||||||||||||||||||||| Sbjct: 2493 tgaaactaagtggagggtccgaaccgactgatgttgaagaatca 2536
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 886 bits (447), Expect = 0.0 Identities = 582/625 (93%), Gaps = 9/625 (1%) Strand = Plus / Plus Query: 35 gcaggcaagagtacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 94 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 gcaggcaagag-acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 212 Query: 95 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 154 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 213 aaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacgggg 272 Query: 155 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 214 |||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||| | Sbjct: 273 ttgtgggagagcaatataagtgttgtgttgctaggcgaagcggttgagtcccgcacccca 332 Query: 215 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 274 ||||| | |||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 333 gatggtgagagtccagtagccgaaagcatcactagcttacgctctaacccgagtagcatg 392 Query: 275 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 452 Query: 335 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 394 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 453 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 512 Query: 395 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 454 ||||||||| |||||||| | |||||||||||||||||||| ||| |||||||||| Sbjct: 513 aaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcggatctctgac 569 Query: 455 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 514 ||||||||||||||||||||||||||||||| ||||| |||||| |||||||| || Sbjct: 570 cgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag-----gg 624 Query: 515 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 574 ||||||||||||||||||||||||||||||| | |||| ||||||||| ||||||||| Sbjct: 625 gacccaccggagccgtagcgaaagcgagtcttcctggggcaattgtcactacttatggac 684 Query: 575 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 634 |||||||||||||||||||||||||||||||||||||| || |||||||||| |||||| Sbjct: 685 ccgaacctgggtgatctatccatgaccaggatgaagctcgggtgaaactaagtggaggtc 744 Query: 635 cgaaccgactgatgttgaagaatca 659 ||||||||||||||||||| ||||| Sbjct: 745 cgaaccgactgatgttgaaaaatca 769
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 884 bits (446), Expect = 0.0 Identities = 584/627 (93%), Gaps = 11/627 (1%) Strand = Plus / Plus Query: 33 gagcaggcaagagtacaacctggcgaactgaaacatcttagtagccagaggaaaagaaag 92 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4382 gagcaggcaagag-acaacctggcgaactgaaacatcttagtagccagaggaaaagaaag 4440 Query: 93 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 152 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 4441 caaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacgg 4500 Query: 153 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 212 ||||||||||||||||||||||||| ||| ||||||||||||| | || || |||||| Sbjct: 4501 ggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcaccc 4560 Query: 213 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 272 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4561 tagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 4620 Query: 273 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4621 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 4680 Query: 333 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 392 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||| || Sbjct: 4681 gggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcggggag 4740 Query: 393 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 452 ||||||||||| |||||||| | |||||||||||||||||||| | | | ||||| Sbjct: 4741 tgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctgggg--ctctg 4795 Query: 453 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 512 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4796 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag----- 4850 Query: 513 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 572 |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 4851 ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatgg 4910 Query: 573 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 632 ||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| Sbjct: 4911 acccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagtggagg 4970 Query: 633 tccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||| ||||| Sbjct: 4971 tccgaaccgactgatgttgaaaaatca 4997
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 884 bits (446), Expect = 0.0 Identities = 584/627 (93%), Gaps = 11/627 (1%) Strand = Plus / Minus Query: 33 gagcaggcaagagtacaacctggcgaactgaaacatcttagtagccagaggaaaagaaag 92 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23543 gagcaggcaagag-acaacctggcgaactgaaacatcttagtagccagaggaaaagaaag 23485 Query: 93 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 152 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 23484 caaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacgg 23425 Query: 153 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 212 ||||||||||||||||||||||||| ||| ||||||||||||| | || || |||||| Sbjct: 23424 ggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcaccc 23365 Query: 213 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 272 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23364 tagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 23305 Query: 273 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23304 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 23245 Query: 333 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 392 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||| || Sbjct: 23244 gggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcggggag 23185 Query: 393 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 452 ||||||||||| |||||||| | |||||||||||||||||||| | | | ||||| Sbjct: 23184 tgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctgggg--ctctg 23130 Query: 453 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 512 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23129 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag----- 23075 Query: 513 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 572 |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 23074 ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatgg 23015 Query: 573 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 632 ||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| Sbjct: 23014 acccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagtggagg 22955 Query: 633 tccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||| ||||| Sbjct: 22954 tccgaaccgactgatgttgaaaaatca 22928
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 882 bits (445), Expect = 0.0 Identities = 596/642 (92%), Gaps = 12/642 (1%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 86400 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 86458 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 86459 gaggaatagaaagcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaa 86518 Query: 140 accgtgaaaacggggttgtgggagagc--aatacaagcgttgtgctgctaggcgaagcgg 197 ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| Sbjct: 86519 accgtgaaaacggggttgtgggagagcccaatataagctctgtgctgctaggcgaagcgg 86578 Query: 198 ttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgct 257 |||||| | ||||||||||||| | |||||||||||||||||||||| | ||||| ||| Sbjct: 86579 ttgagtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgct 86638 Query: 258 ctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 317 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86639 ctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 86698 Query: 318 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaaga 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86699 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaaga 86758 Query: 378 acccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 437 ||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 86759 acccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 86815 Query: 438 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 497 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 86816 aaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtgg 86875 Query: 498 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 557 |||||||||| ||||||||||||||||||||||| |||||||||| || |||| || Sbjct: 86876 cttggttaag-----ggaacccaccggagccgtagcgagagcgagtcttcatggggcaat 86930 Query: 558 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 86931 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggt 86990 Query: 618 gaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 86991 gaaactaagtggaggtccgaaccgactgatgttgaaaaatca 87032
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 882 bits (445), Expect = 0.0 Identities = 596/642 (92%), Gaps = 12/642 (1%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 88486 ctgctgaatccatgggcaggcaagag-acaacctggtgaactgaaacatcttagtagcca 88544 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88545 gaggaatagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 88604 Query: 140 accgtgaaaacggggttgtgggagagca--atacaagcgttgtgctgctaggcgaagcgg 197 |||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||| Sbjct: 88605 accgtgaaaacggggttgtgggagagcacaatataagctctgtgctgctaggcgaagcgg 88664 Query: 198 ttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgct 257 |||||| | ||||||||||||| | |||||||||||||||||||||| | ||||| ||| Sbjct: 88665 ttgagtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgct 88724 Query: 258 ctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 317 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88725 ctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 88784 Query: 318 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaaga 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88785 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaaga 88844 Query: 378 acccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 437 ||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 88845 acccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 88901 Query: 438 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 497 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 88902 aaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtgg 88961 Query: 498 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 557 |||||||||| ||||||||||||||||||||||| |||||||||| || |||| || Sbjct: 88962 cttggttaag-----ggaacccaccggagccgtagcgagagcgagtcttcatggggcaat 89016 Query: 558 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 89017 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggt 89076 Query: 618 gaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 89077 gaaactaagtggaggtccgaaccgactgatgttgaaaaatca 89118
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 878 bits (443), Expect = 0.0 Identities = 586/628 (93%), Gaps = 13/628 (2%) Strand = Plus / Minus Query: 35 gcaggcaagagtacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 94 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 131717 gcaggcaagag-acaacctggtgaactgaaacatcttagtagccagaggaaaagaaagca 131659 Query: 95 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131658 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 131599 Query: 155 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccc 212 |||||||||||| ||||||| || ||||||||||||||||| | ||| ||| |||||| Sbjct: 131598 ttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccc 131539 Query: 213 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 272 |||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 131538 tagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 131479 Query: 273 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131478 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 131419 Query: 333 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 392 ||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| || Sbjct: 131418 gggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggag 131359 Query: 393 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctct 451 ||||||||||| |||||||| | |||||||||||||||||||| || | || |||| Sbjct: 131358 tgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcggga-ctct 131303 Query: 452 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131302 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag---- 131247 Query: 512 cggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 571 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 131246 -ggaaaccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgcttatg 131188 Query: 572 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 631 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 131187 gacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggag 131128 Query: 632 gtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||| Sbjct: 131127 gtccgaaccgactgatgttgaagaatca 131100 Score = 878 bits (443), Expect = 0.0 Identities = 586/628 (93%), Gaps = 13/628 (2%) Strand = Plus / Plus Query: 35 gcaggcaagagtacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 94 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 103677 gcaggcaagag-acaacctggtgaactgaaacatcttagtagccagaggaaaagaaagca 103735 Query: 95 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103736 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 103795 Query: 155 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccc 212 |||||||||||| ||||||| || ||||||||||||||||| | ||| ||| |||||| Sbjct: 103796 ttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccc 103855 Query: 213 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 272 |||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 103856 tagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 103915 Query: 273 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103916 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 103975 Query: 333 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 392 ||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| || Sbjct: 103976 gggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggag 104035 Query: 393 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctct 451 ||||||||||| |||||||| | |||||||||||||||||||| || | || |||| Sbjct: 104036 tgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcggga-ctct 104091 Query: 452 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104092 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag---- 104147 Query: 512 cggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 571 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 104148 -ggaaaccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgcttatg 104206 Query: 572 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 631 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 104207 gacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggag 104266 Query: 632 gtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||||||| Sbjct: 104267 gtccgaaccgactgatgttgaagaatca 104294
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 878 bits (443), Expect = 0.0 Identities = 599/642 (93%), Gaps = 18/642 (2%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagt-agcc 78 ||||||||||| || ||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 238 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtgagcc 296 Query: 79 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 356 Query: 139 aaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag-cgg 197 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| || Sbjct: 357 aaccgtgaaaacggg-ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagacgc 415 Query: 198 ttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgct 257 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 416 ccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgct 475 Query: 258 ctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 317 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 476 ctgacccgagtagcatggggcacgtggaatcccgtgtgaatcgacaaggaccaccttgca 535 Query: 318 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaaga 377 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 536 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaaga 595 Query: 378 acccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 437 | ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 596 a-ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 651 Query: 438 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 497 | | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 652 cca----gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 707 Query: 498 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 557 |||||||||| |||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 708 cttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaat 762 Query: 558 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 763 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggt 822 Query: 618 gaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 823 gaaactaagtggaggtccgaaccgactgatgttgaagaatca 864
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 876 bits (442), Expect = 0.0 Identities = 584/627 (93%), Gaps = 12/627 (1%) Strand = Plus / Plus Query: 33 gagcaggcaagagtacaacctggcgaactgaaacatcttagtagccagaggaaaagaaag 92 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4651 gagcaggcaagag-acaacctggcgaactgaaacatcttagtagccagaggaaaagaaag 4709 Query: 93 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4710 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 4769 Query: 153 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 212 ||||||||||||||||||||||||| ||||||||||||||||| || || || |||||| Sbjct: 4770 ggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcaccc 4829 Query: 213 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 272 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 4830 tagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtaaca 4889 Query: 273 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 332 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4890 tggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 4949 Query: 333 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 392 ||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| || Sbjct: 4950 gggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcggggag 5009 Query: 393 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 452 ||||||||||| |||||||| | ||||||||| |||||||||| | | | ||||| Sbjct: 5010 tgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctgggg--ctctg 5063 Query: 453 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 512 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5064 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag----- 5118 Query: 513 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 572 |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5119 ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatgg 5178 Query: 573 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 632 |||||||||||||||||||||||||||||||||||||| || | |||||||||| |||| Sbjct: 5179 acccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagtggagg 5238 Query: 633 tccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||| ||||| Sbjct: 5239 tccgaaccgactgatgttgaaaaatca 5265
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 876 bits (442), Expect = 0.0 Identities = 584/627 (93%), Gaps = 12/627 (1%) Strand = Plus / Plus Query: 33 gagcaggcaagagtacaacctggcgaactgaaacatcttagtagccagaggaaaagaaag 92 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4651 gagcaggcaagag-acaacctggcgaactgaaacatcttagtagccagaggaaaagaaag 4709 Query: 93 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4710 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 4769 Query: 153 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 212 ||||||||||||||||||||||||| ||||||||||||||||| || || || |||||| Sbjct: 4770 ggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcaccc 4829 Query: 213 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 272 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 4830 tagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtaaca 4889 Query: 273 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 332 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4890 tggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 4949 Query: 333 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 392 ||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| || Sbjct: 4950 gggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcggggag 5009 Query: 393 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 452 ||||||||||| |||||||| | ||||||||| |||||||||| | | | ||||| Sbjct: 5010 tgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctgggg--ctctg 5063 Query: 453 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 512 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5064 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag----- 5118 Query: 513 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 572 |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5119 ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatgg 5178 Query: 573 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 632 |||||||||||||||||||||||||||||||||||||| || | |||||||||| |||| Sbjct: 5179 acccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagtggagg 5238 Query: 633 tccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||| ||||| Sbjct: 5239 tccgaaccgactgatgttgaaaaatca 5265
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 858 bits (433), Expect = 0.0 Identities = 439/441 (99%) Strand = Plus / Plus Query: 219 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 278 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 279 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 339 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 399 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 459 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 300 Query: 519 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 578 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 301 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 360 Query: 579 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 638 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 420 Query: 639 ccgactgatgttgaagaatca 659 ||||||||||||||||||||| Sbjct: 421 ccgactgatgttgaagaatca 441
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 852 bits (430), Expect = 0.0 Identities = 604/655 (92%), Gaps = 14/655 (2%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| |||||| |||||||||| || |||| |||||| | ||||||||||||||||| Sbjct: 52561 accttttgaactgc-tgctgaatccatgggcagacaagag-ataacctggcgaactgaaa 52504 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 52503 catcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaa 52444 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||| |||||||||||||||||||||||||| ||| || ||||||| Sbjct: 52443 tgggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgc 52384 Query: 186 taggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatc 244 |||||||| | | |||| ||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 52383 taggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatc 52324 Query: 245 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 304 | |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 52323 attagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaa 52264 Query: 305 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 364 |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 52263 ggaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgaggg 52204 Query: 365 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 424 || ||||||||||||||||| |||| ||||||||||||| |||||||| | ||||||| Sbjct: 52203 aagggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctccc 52147 Query: 425 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 484 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 52146 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 52089 Query: 485 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 544 |||||||||| |||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 52088 tcataggcagcggcttggttaag-----ggaacccaccggagccatagcgaaagcgagta 52034 Query: 545 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 604 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52033 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 51974 Query: 605 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 51973 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 51919 Score = 852 bits (430), Expect = 0.0 Identities = 604/655 (92%), Gaps = 14/655 (2%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| |||||| |||||||||| || |||| |||||| | ||||||||||||||||| Sbjct: 37267 accttttgaactgc-tgctgaatccatgggcagacaagag-ataacctggcgaactgaaa 37324 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 37325 catcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaa 37384 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||| |||||||||||||||||||||||||| ||| || ||||||| Sbjct: 37385 tgggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgc 37444 Query: 186 taggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatc 244 |||||||| | | |||| ||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 37445 taggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatc 37504 Query: 245 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 304 | |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 37505 attagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaa 37564 Query: 305 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 364 |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 37565 ggaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgaggg 37624 Query: 365 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 424 || ||||||||||||||||| |||| ||||||||||||| |||||||| | ||||||| Sbjct: 37625 aagggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctccc 37681 Query: 425 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 484 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 37682 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 37739 Query: 485 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 544 |||||||||| |||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 37740 tcataggcagcggcttggttaag-----ggaacccaccggagccatagcgaaagcgagta 37794 Query: 545 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 604 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37795 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 37854 Query: 605 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 37855 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 37909
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 852 bits (430), Expect = 0.0 Identities = 604/655 (92%), Gaps = 14/655 (2%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| |||||| |||||||||| || |||| |||||| | ||||||||||||||||| Sbjct: 4195 accttttgaactgc-tgctgaatccatgggcagacaagag-ataacctggcgaactgaaa 4252 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 4253 catcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaa 4312 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||| |||||||||||||||||||||||||| ||| || ||||||| Sbjct: 4313 tgggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgc 4372 Query: 186 taggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatc 244 |||||||| | | |||| ||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 4373 taggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatc 4432 Query: 245 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 304 | |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 4433 attagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaa 4492 Query: 305 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 364 |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 4493 ggaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgaggg 4552 Query: 365 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 424 || ||||||||||||||||| |||| ||||||||||||| |||||||| | ||||||| Sbjct: 4553 aagggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctccc 4609 Query: 425 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 484 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 4610 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 4667 Query: 485 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 544 |||||||||| |||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 4668 tcataggcagcggcttggttaag-----ggaacccaccggagccatagcgaaagcgagta 4722 Query: 545 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 604 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4723 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 4782 Query: 605 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 4783 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 4837
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 846 bits (427), Expect = 0.0 Identities = 539/573 (94%), Gaps = 10/573 (1%) Strand = Plus / Minus Query: 64 aacatcttagtagccagaggaaaagaaag-caaaagcgattcccgtagtagcggcgagcg 122 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 564 aacatcttagtagccagaggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcg 505 Query: 123 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgc 182 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 504 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcgatacaagcgtcgtgc 445 Query: 183 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 242 |||||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||| Sbjct: 444 tgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagca 385 Query: 243 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 302 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 325 Query: 303 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 265 Query: 363 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 422 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 264 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 208 Query: 423 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 482 ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 207 ccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcg 149 Query: 483 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 542 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 148 actcataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaagcgag 94 Query: 543 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 602 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 34 Query: 603 ggatgaagcttggatgaaactaagcagaggtcc 635 ||||||||||||| |||||||||| ||||||| Sbjct: 33 ggatgaagcttgggtgaaactaagtggaggtcc 1
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 837 bits (422), Expect = 0.0 Identities = 580/631 (91%), Gaps = 15/631 (2%) Strand = Plus / Minus Query: 35 gcaggcaagagtacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 94 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 128293 gcaggcaagag-acaacctggcgaactgaaacatcttagtagccagaggaaaggaaagca 128235 Query: 95 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 154 || ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 128234 aacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacgggg 128175 Query: 155 ttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 208 ||||||| |||| ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 128174 ttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgc 128115 Query: 209 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 268 |||||||||||| | |||||||||||||||||||||||||||| | ||||| |||| ||| Sbjct: 128114 accctagatggcaagagtccagtagccgaaagcatcactagctcacgctctaacccaagt 128055 Query: 269 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128054 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 127995 Query: 329 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 388 |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| || Sbjct: 127994 tcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaacccccatagg 127935 Query: 389 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 448 | ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||| Sbjct: 127934 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaattggatc 127878 Query: 449 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 508 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 127877 tctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggttaag- 127819 Query: 509 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 568 |||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 127818 ----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctc 127763 Query: 569 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 628 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 127762 atggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaactaagtg 127703 Query: 629 gaggtccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||| ||||| Sbjct: 127702 gaggtccgaaccgactgatgttgaaaaatca 127672 Score = 837 bits (422), Expect = 0.0 Identities = 580/631 (91%), Gaps = 15/631 (2%) Strand = Plus / Plus Query: 35 gcaggcaagagtacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 94 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95154 gcaggcaagag-acaacctggcgaactgaaacatcttagtagccagaggaaaggaaagca 95212 Query: 95 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 154 || ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 95213 aacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacgggg 95272 Query: 155 ttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 208 ||||||| |||| ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 95273 ttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgc 95332 Query: 209 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 268 |||||||||||| | |||||||||||||||||||||||||||| | ||||| |||| ||| Sbjct: 95333 accctagatggcaagagtccagtagccgaaagcatcactagctcacgctctaacccaagt 95392 Query: 269 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95393 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 95452 Query: 329 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 388 |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| || Sbjct: 95453 tcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaacccccatagg 95512 Query: 389 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 448 | ||||||||||||| |||||||| | |||||||||||||||||||| ||| |||| Sbjct: 95513 ggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaattggatc 95569 Query: 449 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 508 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 95570 tctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggttaag- 95628 Query: 509 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 568 |||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 95629 ----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctc 95684 Query: 569 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 628 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 95685 atggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaactaagtg 95744 Query: 629 gaggtccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||| ||||| Sbjct: 95745 gaggtccgaaccgactgatgttgaaaaatca 95775
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 831 bits (419), Expect = 0.0 Identities = 566/613 (92%), Gaps = 9/613 (1%) Strand = Plus / Minus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 116045 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattctc 115986 Query: 107 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 166 |||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| Sbjct: 115985 gtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggagc 115927 Query: 167 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 226 | | ||| |||||| ||||||||||||| ||||||| | ||||||||||||| ||||| Sbjct: 115926 taaataagtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagt 115867 Query: 227 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 286 |||||| ||||||||| |||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 115866 ccagtaaccgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaa 115807 Query: 287 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 346 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 115806 tcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagc 115747 Query: 347 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 406 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 115746 gaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatg 115687 Query: 407 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 466 ||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 115686 aaaccgta---agctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgtt 115630 Query: 467 gaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggag 526 ||||||||||||||||||| |||||||||||| ||||||||||| | ||||||||| Sbjct: 115629 gaagaatgagccggcgacttataggcagtggcctggttaagggagc-----ccaccggag 115575 Query: 527 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 586 |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 115574 ccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggacccgaacctgggt 115515 Query: 587 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 646 ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 115514 gatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactga 115455 Query: 647 tgttgaagaatca 659 ||||||| ||||| Sbjct: 115454 tgttgaaaaatca 115442 Score = 831 bits (419), Expect = 0.0 Identities = 566/613 (92%), Gaps = 9/613 (1%) Strand = Plus / Plus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 86075 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattctc 86134 Query: 107 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 166 |||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| Sbjct: 86135 gtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggagc 86193 Query: 167 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 226 | | ||| |||||| ||||||||||||| ||||||| | ||||||||||||| ||||| Sbjct: 86194 taaataagtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagt 86253 Query: 227 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 286 |||||| ||||||||| |||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 86254 ccagtaaccgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaa 86313 Query: 287 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 346 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 86314 tcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagc 86373 Query: 347 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 406 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 86374 gaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatg 86433 Query: 407 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 466 ||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 86434 aaaccgta---agctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgtt 86490 Query: 467 gaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggag 526 ||||||||||||||||||| |||||||||||| ||||||||||| | ||||||||| Sbjct: 86491 gaagaatgagccggcgacttataggcagtggcctggttaagggagc-----ccaccggag 86545 Query: 527 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 586 |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 86546 ccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggacccgaacctgggt 86605 Query: 587 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 646 ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 86606 gatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactga 86665 Query: 647 tgttgaagaatca 659 ||||||| ||||| Sbjct: 86666 tgttgaaaaatca 86678
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 825 bits (416), Expect = 0.0 Identities = 566/614 (92%), Gaps = 9/614 (1%) Strand = Plus / Minus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 146395 acaacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattccc 146336 Query: 107 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 166 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 146335 gtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagc 146276 Query: 167 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 226 |||| ||||||| |||||||||||||||| ||||||| | | ||||||||||| | ||| Sbjct: 146275 aatataagcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagt 146216 Query: 227 ccagtagccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtgga 285 ||||||||||||||||||||| || |||||||| ||||||||||||||||||||| || Sbjct: 146215 ccagtagccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcaga 146156 Query: 286 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 345 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 146155 atcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatag 146096 Query: 346 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 405 | |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 146095 caaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacat 146036 Query: 406 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 465 ||||||| | ||||||||||||||||||| ||| |||| |||||||||||||||| Sbjct: 146035 gaaaccg---taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgt 145979 Query: 466 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 525 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||| Sbjct: 145978 tgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaacccaccgga 145924 Query: 526 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 585 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 145923 gccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctggg 145864 Query: 586 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 645 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 145863 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 145804 Query: 646 atgttgaagaatca 659 |||||||| ||||| Sbjct: 145803 atgttgaaaaatca 145790 Score = 825 bits (416), Expect = 0.0 Identities = 566/614 (92%), Gaps = 9/614 (1%) Strand = Plus / Plus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 112067 acaacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattccc 112126 Query: 107 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 166 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 112127 gtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagc 112186 Query: 167 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 226 |||| ||||||| |||||||||||||||| ||||||| | | ||||||||||| | ||| Sbjct: 112187 aatataagcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagt 112246 Query: 227 ccagtagccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtgga 285 ||||||||||||||||||||| || |||||||| ||||||||||||||||||||| || Sbjct: 112247 ccagtagccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcaga 112306 Query: 286 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 345 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112307 atcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatag 112366 Query: 346 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 405 | |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 112367 caaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacat 112426 Query: 406 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 465 ||||||| | ||||||||||||||||||| ||| |||| |||||||||||||||| Sbjct: 112427 gaaaccg---taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgt 112483 Query: 466 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 525 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||| Sbjct: 112484 tgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaacccaccgga 112538 Query: 526 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 585 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 112539 gccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctggg 112598 Query: 586 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 645 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 112599 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 112658 Query: 646 atgttgaagaatca 659 |||||||| ||||| Sbjct: 112659 atgttgaaaaatca 112672
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 823 bits (415), Expect = 0.0 Identities = 564/613 (92%), Gaps = 8/613 (1%) Strand = Plus / Plus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 224 Query: 107 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 166 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 225 atagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggggagc 284 Query: 167 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 226 || | |||||||| |||||||||||| ||||| | | ||||| ||||||| | ||| Sbjct: 285 aaagtaggcgttgtgtcgctaggcgaagcagttgaatcctgcaccatagatggtgagagt 344 Query: 227 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 286 ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 345 ccagtagccgaaagcatcactagtttatgctctaacccgagtagcatggggcacgtggaa 404 Query: 287 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 346 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 405 tcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagc 464 Query: 347 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 406 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 465 gaagtagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaatagaacatg 524 Query: 407 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 466 |||||| | |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 525 aaaccg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgtt 581 Query: 467 gaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggag 526 ||||||||||||||||||| ||||| |||||| |||||||| |||||||||||||| Sbjct: 582 gaagaatgagccggcgacttataggtagtggcctggttaag-----ggaacccaccggag 636 Query: 527 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 586 |||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| Sbjct: 637 ccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacctgggt 696 Query: 587 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 646 ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 697 gatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactga 756 Query: 647 tgttgaagaatca 659 ||||||| ||||| Sbjct: 757 tgttgaaaaatca 769
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 815 bits (411), Expect = 0.0 Identities = 563/613 (91%), Gaps = 8/613 (1%) Strand = Plus / Plus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4054 acaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattccc 4113 Query: 107 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 166 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 4114 gtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagc 4173 Query: 167 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 226 |||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||| Sbjct: 4174 aatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagt 4233 Query: 227 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 286 |||||||||||||||| |||| |||| || | |||||||||||||||||||||||||| Sbjct: 4234 ccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaa 4293 Query: 287 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4294 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 4353 Query: 347 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 406 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 4354 gaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatg 4413 Query: 407 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 466 ||| || | |||| |||||||||| |||| ||| |||||||||||||||||||||| Sbjct: 4414 aaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgtt 4470 Query: 467 gaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggag 526 ||||||||||||||||||| |||||||||||| |||||||| |||| |||||||| Sbjct: 4471 gaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattcaccggag 4525 Query: 527 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 586 |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 4526 ccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggt 4585 Query: 587 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 646 ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 4586 gatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactga 4645 Query: 647 tgttgaagaatca 659 ||||||| ||||| Sbjct: 4646 tgttgaaaaatca 4658
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 815 bits (411), Expect = 0.0 Identities = 563/613 (91%), Gaps = 8/613 (1%) Strand = Plus / Plus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 164 acaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattccc 223 Query: 107 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 166 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 224 gtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagc 283 Query: 167 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 226 |||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||| Sbjct: 284 aatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagt 343 Query: 227 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 286 |||||||||||||||| |||| |||| || | |||||||||||||||||||||||||| Sbjct: 344 ccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaa 403 Query: 287 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 463 Query: 347 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 406 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 464 gaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatg 523 Query: 407 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 466 ||| || | |||| |||||||||| |||| ||| |||||||||||||||||||||| Sbjct: 524 aaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgtt 580 Query: 467 gaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggag 526 ||||||||||||||||||| |||||||||||| |||||||| |||| |||||||| Sbjct: 581 gaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattcaccggag 635 Query: 527 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 586 |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 636 ccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggt 695 Query: 587 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 646 ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 696 gatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactga 755 Query: 647 tgttgaagaatca 659 ||||||| ||||| Sbjct: 756 tgttgaaaaatca 768
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 815 bits (411), Expect = 0.0 Identities = 563/613 (91%), Gaps = 8/613 (1%) Strand = Plus / Minus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 151081 acaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattccc 151022 Query: 107 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 166 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 151021 gtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagc 150962 Query: 167 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 226 |||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||| Sbjct: 150961 aatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagt 150902 Query: 227 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 286 |||||||||||||||| |||| |||| || | |||||||||||||||||||||||||| Sbjct: 150901 ccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaa 150842 Query: 287 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150841 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 150782 Query: 347 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 406 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 150781 gaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatg 150722 Query: 407 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 466 ||| || | |||| |||||||||| |||| ||| |||||||||||||||||||||| Sbjct: 150721 aaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgtt 150665 Query: 467 gaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggag 526 ||||||||||||||||||| |||||||||||| |||||||| |||| |||||||| Sbjct: 150664 gaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattcaccggag 150610 Query: 527 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 586 |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 150609 ccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggt 150550 Query: 587 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 646 ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 150549 gatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactga 150490 Query: 647 tgttgaagaatca 659 ||||||| ||||| Sbjct: 150489 tgttgaaaaatca 150477 Score = 815 bits (411), Expect = 0.0 Identities = 563/613 (91%), Gaps = 8/613 (1%) Strand = Plus / Plus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 117585 acaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattccc 117644 Query: 107 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 166 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 117645 gtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagc 117704 Query: 167 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 226 |||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||| Sbjct: 117705 aatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagt 117764 Query: 227 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 286 |||||||||||||||| |||| |||| || | |||||||||||||||||||||||||| Sbjct: 117765 ccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaa 117824 Query: 287 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117825 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 117884 Query: 347 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 406 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 117885 gaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatg 117944 Query: 407 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 466 ||| || | |||| |||||||||| |||| ||| |||||||||||||||||||||| Sbjct: 117945 aaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgtt 118001 Query: 467 gaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggag 526 ||||||||||||||||||| |||||||||||| |||||||| |||| |||||||| Sbjct: 118002 gaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattcaccggag 118056 Query: 527 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 586 |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 118057 ccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggt 118116 Query: 587 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 646 ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 118117 gatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactga 118176 Query: 647 tgttgaagaatca 659 ||||||| ||||| Sbjct: 118177 tgttgaaaaatca 118189
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 815 bits (411), Expect = 0.0 Identities = 563/613 (91%), Gaps = 8/613 (1%) Strand = Plus / Plus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 164 acaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattccc 223 Query: 107 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 166 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 224 gtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagc 283 Query: 167 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 226 |||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||| Sbjct: 284 aatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagt 343 Query: 227 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 286 |||||||||||||||| |||| |||| || | |||||||||||||||||||||||||| Sbjct: 344 ccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaa 403 Query: 287 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 463 Query: 347 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 406 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 464 gaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatg 523 Query: 407 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 466 ||| || | |||| |||||||||| |||| ||| |||||||||||||||||||||| Sbjct: 524 aaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgtt 580 Query: 467 gaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggag 526 ||||||||||||||||||| |||||||||||| |||||||| |||| |||||||| Sbjct: 581 gaagaatgagccggcgacttataggcagtggcctggttaag-----ggaattcaccggag 635 Query: 527 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 586 |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 636 ccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggt 695 Query: 587 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 646 ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 696 gatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactga 755 Query: 647 tgttgaagaatca 659 ||||||| ||||| Sbjct: 756 tgttgaaaaatca 768
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 807 bits (407), Expect = 0.0 Identities = 599/658 (91%), Gaps = 15/658 (2%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaa-tcctgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||||||||| |||||||| || | || |||||||| |||||| |||||||||||| Sbjct: 126 accttttaaactg-ctgctgaattcataggcgggcaagag-acaacccggcgaactgaaa 183 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 184 catcttagtagccggaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaa 243 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac----aagcgttgtg 181 ||||||| |||||||||||||||||||||||||||| |||| |||| |||| ||| | Sbjct: 244 tgggagcggcctaaaccgtgaaaacggggttgtgggggagctatacaaataagcattgcg 303 Query: 182 ctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagc 241 |||||||||||||| ||||||| | |||||| |||||| | ||||||||| |||||||| Sbjct: 304 ctgctaggcgaagcagttgagtcctgcaccccagatggtgagagtccagtaaccgaaagc 363 Query: 242 atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 301 || || | |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 ataacaatcttatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcag 423 Query: 302 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 483 Query: 362 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagct 421 ||||||||||||||||||||||| ||| ||||||||||||| |||||||| | |||| Sbjct: 484 gggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagct 540 Query: 422 cccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 481 |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 541 cccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggc 600 Query: 482 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 541 |||| |||||||||||| |||||||| ||||||||||||||||||||||||||| | Sbjct: 601 gacttataggcagtggcctggttaag-----ggaacccaccggagccgtagcgaaagcaa 655 Query: 542 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 601 ||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 gtcttcctggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 715 Query: 602 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 716 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatca 773
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 803 bits (405), Expect = 0.0 Identities = 596/654 (91%), Gaps = 8/654 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcctgag-caggcaagagtacaacctggcgaactgaaa 65 |||||||||||||| |||||||||| || | |||||||| ||||||||||||||||||| Sbjct: 109 accttttaaactgc-tgctgaatccataggcgggcaagag-acaacctggcgaactgaaa 166 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 ||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 167 catcttagtagccggaggaagagaaagcaaaagcgattctcgtagtagcggcgagcgaaa 226 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 ||||||||||||||||||||||||||||||||||| |||| | | |||| |||| ||| Sbjct: 227 cgggagcagcctaaaccgtgaaaacggggttgtgggggagctaaagaagcattgtattgc 286 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||| ||||||| | ||||||||||||| | ||||||||| |||||||||| | Sbjct: 287 taggcgaagcagttgagtcctgcaccctagatggtgagagtccagtaaccgaaagcatta 346 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 | ||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 347 caagcttgggctctaacccgagtaacatggggcacgtggaatcccgtgtgaatcagcaag 406 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 407 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 466 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 ||||||||||||||||||| ||| ||||||||||||| |||||||| | |||| ||| Sbjct: 467 aaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttcca 523 Query: 426 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 agcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgact 583 Query: 486 cataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 545 |||||||||||| |||||||||||| | | ||||||||||| |||||||||||||||| Sbjct: 584 tataggcagtggcctggttaagggaaag--aaccaccggagccatagcgaaagcgagtct 641 Query: 546 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 605 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 tcccagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 701 Query: 606 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||| |||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 702 tgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatca 755
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 801 bits (404), Expect = 0.0 Identities = 573/626 (91%), Gaps = 10/626 (1%) Strand = Plus / Minus Query: 35 gcaggcaagagtacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 94 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117996 gcaggcaagag-acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 117938 Query: 95 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 154 |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 117937 aaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacgggg 117878 Query: 155 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 214 |||||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||||||| Sbjct: 117877 ttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcacccta 117818 Query: 215 gatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgagtagcat 273 ||||| | |||||||||||||||||||| || | || ||||||| ||||||||||||| Sbjct: 117817 gatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagtagcat 117758 Query: 274 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 333 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 117757 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctg 117698 Query: 334 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 393 |||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 117697 ggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagt 117638 Query: 394 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 453 |||||||||| |||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 117637 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctga 117581 Query: 454 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 513 |||||||||||||||||||||||||||||||| ||||| |||||| |||||||| | Sbjct: 117580 ccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag-----g 117526 Query: 514 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 573 ||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||| Sbjct: 117525 gaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatgga 117466 Query: 574 cccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggt 633 ||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||| Sbjct: 117465 cccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaagtggaggt 117406 Query: 634 ccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||| ||||| Sbjct: 117405 ccgaaccgactgatgttgaaaaatca 117380 Score = 801 bits (404), Expect = 0.0 Identities = 573/626 (91%), Gaps = 10/626 (1%) Strand = Plus / Plus Query: 35 gcaggcaagagtacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 94 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90106 gcaggcaagag-acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 90164 Query: 95 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 154 |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 90165 aaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacgggg 90224 Query: 155 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 214 |||||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||||||| Sbjct: 90225 ttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcacccta 90284 Query: 215 gatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgagtagcat 273 ||||| | |||||||||||||||||||| || | || ||||||| ||||||||||||| Sbjct: 90285 gatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagtagcat 90344 Query: 274 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 333 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 90345 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctg 90404 Query: 334 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 393 |||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 90405 ggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagt 90464 Query: 394 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 453 |||||||||| |||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 90465 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctga 90521 Query: 454 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 513 |||||||||||||||||||||||||||||||| ||||| |||||| |||||||| | Sbjct: 90522 ccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag-----g 90576 Query: 514 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 573 ||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||| Sbjct: 90577 gaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatgga 90636 Query: 574 cccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggt 633 ||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||| Sbjct: 90637 cccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaagtggaggt 90696 Query: 634 ccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||| ||||| Sbjct: 90697 ccgaaccgactgatgttgaaaaatca 90722
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 759 bits (383), Expect = 0.0 Identities = 389/391 (99%) Strand = Plus / Plus Query: 269 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 329 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 389 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 448 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 449 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 240 Query: 509 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 568 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 241 gaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 300 Query: 569 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 360 Query: 629 gaggtccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||||||||| Sbjct: 361 gaggtccgaaccgactgatgttgaagaatca 391
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 747 bits (377), Expect = 0.0 Identities = 558/614 (90%), Gaps = 12/614 (1%) Strand = Plus / Plus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 164 acaacctggcgaactgaaacatcttagtagccagaggaaaataaagcaaaagcgattccc 223 Query: 107 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 166 ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 224 atagtagcggcgagcgaaatgggatcagcctaaaccgcgaaaacggggttgtgggagagc 283 Query: 167 aatacaagcgttgtgctgctaggcgaagcgg-ttgagtgccgcaccctagatggctaaag 225 |||| |||||| ||||||||||||||||| | || | || |||||||||||||| |||| Sbjct: 284 aataaaagcgtcgtgctgctaggcgaagcagcttaaatgatgcaccctagatggcgaaag 343 Query: 226 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 285 |||||||| | |||||||||||| || |||||||||||||||||||||| |||||| | Sbjct: 344 tccagtagtcaaaagcatcactacgttgcgctctgacccgagtagcatgggacacgtgta 403 Query: 286 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 345 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 404 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccaatag 463 Query: 346 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 405 ||||||||||||||||||| ||||||||||||||| | |||| ||||||||||||| | Sbjct: 464 taaagtagtaccgtgagggaagggtgaaaagaacccc-attggggagtgaaatagaacat 522 Query: 406 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 465 |||||||| |||| ||||||||||||||| | || | |||||||||||||||||| Sbjct: 523 gaaaccgta---agctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgt 577 Query: 466 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 525 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 578 tgaagaatgagccggcgactcataggcagcggcttggttaagggaac-----ccaccgga 632 Query: 526 gccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctggg 585 ||| |||||||||||||| || ||||| | |||||||||||||||||||||||||||||| Sbjct: 633 gccatagcgaaagcgagtattcataggactattgtcactgcttatggacccgaacctggg 692 Query: 586 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 645 |||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||| Sbjct: 693 tgatctatccatgaccaggatgaagctttggtgaaactaagtggaggtccgaaccgactg 752 Query: 646 atgttgaagaatca 659 |||||||||||||| Sbjct: 753 atgttgaagaatca 766
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 741 bits (374), Expect = 0.0 Identities = 531/580 (91%), Gaps = 10/580 (1%) Strand = Plus / Plus Query: 35 gcaggcaagagtacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 94 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2197 gcaggcaagag-acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 2255 Query: 95 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 154 |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2256 aaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacgggg 2315 Query: 155 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 214 |||||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||||||| Sbjct: 2316 ttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcacccta 2375 Query: 215 gatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgacccgagtagcat 273 ||||| | |||||||||||||||||||| || | || ||||||| ||||||||||||| Sbjct: 2376 gatggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagtagcat 2435 Query: 274 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 333 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2436 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctg 2495 Query: 334 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 393 |||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 2496 ggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagt 2555 Query: 394 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 453 |||||||||| |||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 2556 gaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctga 2612 Query: 454 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 513 |||||||||||||||||||||||||||||||| ||||| |||||| |||||||| | Sbjct: 2613 ccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag-----g 2667 Query: 514 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 573 ||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||| Sbjct: 2668 gaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatgga 2727 Query: 574 cccgaacctgggtgatctatccatgaccaggatgaagctt 613 ||||||||||||||||||| |||||||||||||||||||| Sbjct: 2728 cccgaacctgggtgatctaaccatgaccaggatgaagctt 2767
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 735 bits (371), Expect = 0.0 Identities = 374/375 (99%) Strand = Plus / Plus Query: 285 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 345 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 405 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 465 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 240 Query: 525 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 584 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 241 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 300 Query: 585 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 360 Query: 645 gatgttgaagaatca 659 ||||||||||||||| Sbjct: 361 gatgttgaagaatca 375
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 733 bits (370), Expect = 0.0 Identities = 390/394 (98%), Gaps = 2/394 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 124 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 182 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 242 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 302 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 303 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 362 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 422 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 482 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaata 399 |||||||||||||||||||||||||||||||||| Sbjct: 483 aaggtgaaaagaacccccagtgggtagtgaaata 516
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 726 bits (366), Expect = 0.0 Identities = 461/487 (94%), Gaps = 8/487 (1%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 75 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 135 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 136 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 195 Query: 200 -gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 196 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 255 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 315 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 316 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 375 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 376 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 432 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 490 Query: 499 ttggtta 505 ||||||| Sbjct: 491 ttggtta 497
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 726 bits (366), Expect = 0.0 Identities = 386/390 (98%), Gaps = 2/390 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 38 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 96 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 156 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 216 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 276 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 336 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 396 Query: 366 aaggtgaaaagaacccccagtgggtagtga 395 |||||||||||||||||||||||||||||| Sbjct: 397 aaggtgaaaagaacccccagtgggtagtga 426
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 712 bits (359), Expect = 0.0 Identities = 377/382 (98%), Gaps = 2/382 (0%) Strand = Plus / Minus Query: 280 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 340 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 400 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 460 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 517 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 122581 Query: 518 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 577 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122580 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 122521 Query: 578 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 637 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 122520 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcga 122461 Query: 638 accgactgatgttgaagaatca 659 |||||||||||||||||||||| Sbjct: 122460 accgactgatgttgaagaatca 122439 Score = 505 bits (255), Expect = e-140 Identities = 278/283 (98%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 123345 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 123287 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123286 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 123227 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123226 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 123167 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123166 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 123107 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatc 288 |||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 123106 ctagcttacgctctgccccgagtagcatggggcacgtggaatc 123064
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 712 bits (359), Expect = 0.0 Identities = 377/382 (98%), Gaps = 2/382 (0%) Strand = Plus / Minus Query: 280 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 340 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 400 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 460 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 517 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 12825122 Query: 518 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 577 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12825121 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 12825062 Query: 578 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 637 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 12825061 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcga 12825002 Query: 638 accgactgatgttgaagaatca 659 |||||||||||||||||||||| Sbjct: 12825001 accgactgatgttgaagaatca 12824980 Score = 505 bits (255), Expect = e-140 Identities = 278/283 (98%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 12825886 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 12825828 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825827 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 12825768 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825767 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 12825708 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825707 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 12825648 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatc 288 |||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825647 ctagcttacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 225 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 284 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 712 bits (359), Expect = 0.0 Identities = 457/484 (94%), Gaps = 8/484 (1%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 478 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 420 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 360 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 359 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 300 Query: 200 -gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 299 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 240 Query: 259 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 318 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 239 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccgccttgcaa 180 Query: 319 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 378 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 179 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 120 Query: 379 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 438 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 119 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 63 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 5 Query: 499 ttgg 502 |||| Sbjct: 4 ttgg 1
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 666 bits (336), Expect = 0.0 Identities = 400/418 (95%), Gaps = 5/418 (1%) Strand = Plus / Minus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 130397 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 130339 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130338 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 130279 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 130278 accgtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtg 130219 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 130218 gagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctct 130159 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130158 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 130099 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 130098 gctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaac 130039 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 437 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 130038 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 666 bits (336), Expect = 0.0 Identities = 400/418 (95%), Gaps = 5/418 (1%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 102059 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 102117 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102118 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 102177 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 102178 accgtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtg 102237 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 102238 gagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctct 102297 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102298 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 102357 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 102358 gctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaac 102417 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 437 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 102418 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 102472 Score = 325 bits (164), Expect = 1e-85 Identities = 200/212 (94%), Gaps = 5/212 (2%) Strand = Plus / Minus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129854 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 129795 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||||||||| Sbjct: 129794 ggaggtccgaaccgactgatgttgaagaatca 129763 Score = 325 bits (164), Expect = 1e-85 Identities = 200/212 (94%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102602 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 102661 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||||||||| Sbjct: 102662 ggaggtccgaaccgactgatgttgaagaatca 102693
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 658 bits (332), Expect = 0.0 Identities = 399/418 (95%), Gaps = 5/418 (1%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 46390 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttactagcca 46448 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 46449 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaa 46508 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 46509 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtg 46568 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 46569 gagtaccgcaccctagatggctagagtccagtagccgaaagcatcactagcttatgctct 46628 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46629 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 46688 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 46689 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 46748 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 437 ||||| ||| ||||||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 46749 ccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagg 46803 Score = 341 bits (172), Expect = 2e-90 Identities = 202/212 (95%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46933 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 46992 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||||||||| Sbjct: 46993 ggaggtccgaaccgactgatgttgaagaatca 47024
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 646 bits (326), Expect = 0.0 Identities = 409/432 (94%), Gaps = 6/432 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 133 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 190 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 catcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 250 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 251 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 310 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 ||||||||||||| |||||| |||||||||||||| | |||||||||||||||||||||| Sbjct: 311 taggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatca 370 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 430 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 431 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtactaccgtgaggga 490 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||| ||| |||||||| | |||||||| Sbjct: 491 agggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctccca 547 Query: 426 agcagtgggagg 437 |||||||||||| Sbjct: 548 agcagtgggagg 559 Score = 258 bits (130), Expect = 2e-65 Identities = 166/178 (93%), Gaps = 5/178 (2%) Strand = Plus / Plus Query: 482 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 541 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 542 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 601 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 602 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 764
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 646 bits (326), Expect = 0.0 Identities = 409/432 (94%), Gaps = 6/432 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 133 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 190 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 catcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 250 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 251 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 310 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 ||||||||||||| |||||| |||||||||||||| | |||||||||||||||||||||| Sbjct: 311 taggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatca 370 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 430 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 431 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtactaccgtgaggga 490 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| || ||||||||||||| |||||||| | |||||||| Sbjct: 491 agggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg---taagctccca 547 Query: 426 agcagtgggagg 437 |||||||||||| Sbjct: 548 agcagtgggagg 559 Score = 309 bits (156), Expect = 6e-81 Identities = 198/212 (93%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatca 787
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 646 bits (326), Expect = 0.0 Identities = 409/432 (94%), Gaps = 6/432 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 133 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 190 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 catcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 250 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 251 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 310 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 ||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||| Sbjct: 311 taggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcc 370 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 430 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 431 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgaggga 490 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 491 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 547 Query: 426 agcagtgggagg 437 |||||||||||| Sbjct: 548 agcagtgggagg 559 Score = 287 bits (145), Expect = 2e-74 Identities = 198/213 (92%), Gaps = 7/213 (3%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 508 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 566 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 567 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 626 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 627 cagaggtccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaagaatca 787
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 638 bits (322), Expect = e-180 Identities = 408/432 (94%), Gaps = 6/432 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 133 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 190 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 catcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 250 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 251 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 310 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 ||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||| Sbjct: 311 taggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcc 370 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 430 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 431 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgaggga 490 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| || ||||||||||||| |||||||| | |||||||| Sbjct: 491 agggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg---taagctccca 547 Query: 426 agcagtgggagg 437 |||||||||||| Sbjct: 548 agcagtgggagg 559 Score = 276 bits (139), Expect = 9e-71 Identities = 195/212 (91%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatca 787
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 638 bits (322), Expect = e-180 Identities = 408/432 (94%), Gaps = 6/432 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 133 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 190 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 catcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 250 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 251 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 310 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 ||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||| Sbjct: 311 taggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcc 370 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 430 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 431 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgaggga 490 Query: 366 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 425 | ||||||||||||||||| ||| ||||||||| ||| |||||||| | |||||||| Sbjct: 491 agggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctccca 547 Query: 426 agcagtgggagg 437 |||||||||||| Sbjct: 548 agcagtgggagg 559 Score = 278 bits (140), Expect = 2e-71 Identities = 195/212 (91%), Gaps = 6/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 754 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||||||||| Sbjct: 755 ggaggtccgaaccgactgatgttgaagaatca 786
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 628 bits (317), Expect = e-177 Identities = 426/457 (93%), Gaps = 8/457 (1%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || |||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 187 ctgctgaatccatgggcagacaagag-acaacctggcgaactgaaacatcttagtagccg 245 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 305 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 306 accgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtg 365 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 ||||||| |||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 366 aagtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctct 425 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 485 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 486 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 545 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-g 438 |||| ||| ||||||||||||| |||||||| | ||||||||||||| |||||| | Sbjct: 546 ccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagngggaggag 602 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatga 475 || | |||||||||||||||||||||||||||| Sbjct: 603 cccaggg--ctctgaccgcgtgcctgttgaagaatga 637
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 624 bits (315), Expect = e-176 Identities = 335/339 (98%), Gaps = 2/339 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 29 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 87 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 147 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 207 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 267 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 327 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgata 344 ||||||||||||||||||||||||||||||||||||||| Sbjct: 328 gaccaccttgcaaggctaaatactcctgggtgaccgata 366
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 620 bits (313), Expect = e-174 Identities = 461/507 (90%), Gaps = 10/507 (1%) Strand = Plus / Minus Query: 146 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 205 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 206 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 265 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 266 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 326 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 385 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 386 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 445 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 446 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 505 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928 Query: 506 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 565 || || |||||||||||||||||||| |||||||||| ||||||| |||||||||| Sbjct: 5927 ag-----ggcacccaccggagccgtagcgagagcgagtcttcatagggcaattgtcactg 5873 Query: 566 c-ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 624 | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5872 ctttatggacccgaacctgggtgatctatccatgaccaggatgaagc-tggatgaaacta 5814 Query: 625 agcagaggtccgaaccgactgatgttg 651 || |||||||||||||||||||||||| Sbjct: 5813 agtagaggtccgaaccgactgatgttg 5787 Score = 168 bits (85), Expect = 1e-38 Identities = 94/97 (96%) Strand = Plus / Minus Query: 48 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 107 |||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 6411 caacctggtgaactgaaacatcttagtaaccagaggaagagaaagcaaaagcgattcccg 6352 Query: 108 tagtagcggcgagcgaaatgggagcagcctaaaccgt 144 ||||||||||||||||||||||||||||||||||||| Sbjct: 6351 tagtagcggcgagcgaaatgggagcagcctaaaccgt 6315
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 615 bits (310), Expect = e-173 Identities = 399/424 (94%), Gaps = 6/424 (1%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 146 ctgctgaatccatgggcaggcaagag-acaacctggcgaactgaaacatcttagtagcca 204 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 264 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 199 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 265 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtg 324 Query: 200 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 259 |||||| | ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 325 gagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctct 384 Query: 260 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 444 Query: 320 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 379 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 445 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa- 503 Query: 380 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 439 ||||| ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| | Sbjct: 504 ccccatcggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggag 560 Query: 440 aaag 443 |||| Sbjct: 561 aaag 564 Score = 252 bits (127), Expect = 1e-63 Identities = 142/147 (96%) Strand = Plus / Plus Query: 513 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 572 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 573 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 632 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 633 tccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatca 748
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 577 bits (291), Expect = e-161 Identities = 532/610 (87%), Gaps = 13/610 (2%) Strand = Plus / Minus Query: 54 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 113 ||||||| |||||||| | ||||| | |||| |||| |||||||||||||||| ||||| Sbjct: 139099 ggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaagcgattcccgcagtag 139040 Query: 114 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac-- 171 ||||||||||| ||||| ||||||||||||| ||||||||||||||||||| ||| Sbjct: 139039 cggcgagcgaagagggagtagcctaaaccgtgggaacggggttgtgggagagcgataagt 138980 Query: 172 --aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 229 ||| ||||||||| |||| |||||||| |||| ||||| || ||| || || ||||| Sbjct: 138979 ataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcccagacggttagagtccg 138921 Query: 230 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 289 ||||||| ||||| ||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 138920 gtagccggaagcagcacaggcttacgctctgacccgagtagcatggggcacgtggaatcc 138861 Query: 290 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 349 |||| |||||||| |||||||||| | ||||||||||||| ||||||||||||||||||| Sbjct: 138860 cgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtgaccgatagcgaa 138801 Query: 350 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 409 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 138800 atagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 138741 Query: 410 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 469 ||| | ||||||| |||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 138740 ccg---taagctcccgagcagtgggaggagaattggatctctgaccgcgtgcctgttgaa 138684 Query: 470 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 529 |||||||||||||||| |||||| | ||| |||||||| ||||||||||||||||| Sbjct: 138683 gaatgagccggcgacttataggcggcggcctggttaag-----ggaacccaccggagccg 138629 Query: 530 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 589 ||||||||||||||||| ||||| | |||| ||||||||||||||||||| ||||||| Sbjct: 138628 tagcgaaagcgagtcttcccagggcaactgtcgctgcttatggacccgaacccgggtgat 138569 Query: 590 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 649 |||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||| Sbjct: 138568 ctatccatgaccaggatgaagcttggatagaaccaggtggaggtccgaaccgactgatgt 138509 Query: 650 tgaagaatca 659 |||| ||||| Sbjct: 138508 tgaaaaatca 138499 Score = 577 bits (291), Expect = e-161 Identities = 532/610 (87%), Gaps = 13/610 (2%) Strand = Plus / Plus Query: 54 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 113 ||||||| |||||||| | ||||| | |||| |||| |||||||||||||||| ||||| Sbjct: 82778 ggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaagcgattcccgcagtag 82837 Query: 114 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac-- 171 ||||||||||| ||||| ||||||||||||| ||||||||||||||||||| ||| Sbjct: 82838 cggcgagcgaagagggagtagcctaaaccgtgggaacggggttgtgggagagcgataagt 82897 Query: 172 --aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 229 ||| ||||||||| |||| |||||||| |||| ||||| || ||| || || ||||| Sbjct: 82898 ataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcccagacggttagagtccg 82956 Query: 230 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 289 ||||||| ||||| ||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 82957 gtagccggaagcagcacaggcttacgctctgacccgagtagcatggggcacgtggaatcc 83016 Query: 290 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 349 |||| |||||||| |||||||||| | ||||||||||||| ||||||||||||||||||| Sbjct: 83017 cgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtgaccgatagcgaa 83076 Query: 350 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 409 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 83077 atagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 83136 Query: 410 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 469 ||| | ||||||| |||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 83137 ccg---taagctcccgagcagtgggaggagaattggatctctgaccgcgtgcctgttgaa 83193 Query: 470 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 529 |||||||||||||||| |||||| | ||| |||||||| ||||||||||||||||| Sbjct: 83194 gaatgagccggcgacttataggcggcggcctggttaag-----ggaacccaccggagccg 83248 Query: 530 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 589 ||||||||||||||||| ||||| | |||| ||||||||||||||||||| ||||||| Sbjct: 83249 tagcgaaagcgagtcttcccagggcaactgtcgctgcttatggacccgaacccgggtgat 83308 Query: 590 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 649 |||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||| Sbjct: 83309 ctatccatgaccaggatgaagcttggatagaaccaggtggaggtccgaaccgactgatgt 83368 Query: 650 tgaagaatca 659 |||| ||||| Sbjct: 83369 tgaaaaatca 83378
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 565 bits (285), Expect = e-158 Identities = 561/647 (86%), Gaps = 7/647 (1%) Strand = Plus / Plus Query: 14 aaactgcctgctgaatcctga-gcaggcaagagtacaacctggcgaactgaaacatctta 72 |||||||||||||||| | || |||| |||||| |||||| ||||||||||||||||||| Sbjct: 144051 aaactgcctgctgaattcagaagcagacaagag-acaacccggcgaactgaaacatctta 144109 Query: 73 gtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagc 132 |||||| ||||| | |||||||||||||||||| ||||| ||||||| |||| |||| Sbjct: 144110 gtagccggaggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaag 144169 Query: 133 agcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcga 192 ||||||||||||||| ||||||||||||||||| || || | || | |||||||| Sbjct: 144170 agcctaaaccgtgaagacggggttgtgggagagtgatgagggcttcgttttactaggcga 144229 Query: 193 agcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctt 252 ||| ||||||||| |||||| |||||| | ||||||||||||| ||| | |||||| Sbjct: 144230 agcagttgagtgctgcaccccagatggtgatagtccagtagccggaagtacagctagctc 144289 Query: 253 atgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacc 312 | |||| |||| |||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 144290 acgctccaacccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccacc 144349 Query: 313 ttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtga 372 ||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 144350 ttgtaaggctaaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtga 144409 Query: 373 aaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtg 432 ||||||||||| ||| ||||||||||||| |||||||| |||||||||||||||| Sbjct: 144410 aaagaacccccgtcggggagtgaaatagaacatgaaaccg---cgagctcccaagcagtg 144466 Query: 433 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 492 ||||| ||| | ||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 144467 ggaggagaatgagatctctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggc 144526 Query: 493 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 552 ||||| ||||||||| |||||| |||||||||||||||||||||||||| | || Sbjct: 144527 ggtggcccggttaaggg-ggagaaccc-ccggagccgtagcgaaagcgagtcttgctggg 144584 Query: 553 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 612 || |||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 144585 gcaattgtcaccgcttataaacccgaacctgggtgatctatccatgaccaggatgaagct 144644 Query: 613 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||| |||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 144645 tgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatca 144691 Score = 565 bits (285), Expect = e-158 Identities = 561/647 (86%), Gaps = 7/647 (1%) Strand = Plus / Minus Query: 14 aaactgcctgctgaatcctga-gcaggcaagagtacaacctggcgaactgaaacatctta 72 |||||||||||||||| | || |||| |||||| |||||| ||||||||||||||||||| Sbjct: 88800 aaactgcctgctgaattcagaagcagacaagag-acaacccggcgaactgaaacatctta 88742 Query: 73 gtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagc 132 |||||| ||||| | |||||||||||||||||| ||||| ||||||| |||| |||| Sbjct: 88741 gtagccggaggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaag 88682 Query: 133 agcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcga 192 ||||||||||||||| ||||||||||||||||| || || | || | |||||||| Sbjct: 88681 agcctaaaccgtgaagacggggttgtgggagagtgatgagggcttcgttttactaggcga 88622 Query: 193 agcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctt 252 ||| ||||||||| |||||| |||||| | ||||||||||||| ||| | |||||| Sbjct: 88621 agcagttgagtgctgcaccccagatggtgatagtccagtagccggaagtacagctagctc 88562 Query: 253 atgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacc 312 | |||| |||| |||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 88561 acgctccaacccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccacc 88502 Query: 313 ttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtga 372 ||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 88501 ttgtaaggctaaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtga 88442 Query: 373 aaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtg 432 ||||||||||| ||| ||||||||||||| |||||||| |||||||||||||||| Sbjct: 88441 aaagaacccccgtcggggagtgaaatagaacatgaaaccg---cgagctcccaagcagtg 88385 Query: 433 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 492 ||||| ||| | ||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 88384 ggaggagaatgagatctctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggc 88325 Query: 493 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 552 ||||| ||||||||| |||||| |||||||||||||||||||||||||| | || Sbjct: 88324 ggtggcccggttaaggg-ggagaaccc-ccggagccgtagcgaaagcgagtcttgctggg 88267 Query: 553 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 612 || |||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 88266 gcaattgtcaccgcttataaacccgaacctgggtgatctatccatgaccaggatgaagct 88207 Query: 613 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||| |||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 88206 tgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatca 88160
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 561 bits (283), Expect = e-156 Identities = 359/378 (94%), Gaps = 6/378 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 122 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcgaactgaaa 179 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 239 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 240 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 299 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 ||||||||||||| || | | |||||||||||||| | |||||||||||||||||||||| Sbjct: 300 taggcgaagcggtggaatactgcaccctagatggcgatagtccagtagccgaaagcatca 359 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 419 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||| Sbjct: 420 gaccaccttgcaaggctaaatactac--ggtgaccgatagtgaagtagtaccgtgaggga 477 Query: 366 aaggtgaaaagaaccccc 383 | |||| ||||||||||| Sbjct: 478 agggtg-aaagaaccccc 494 Score = 220 bits (111), Expect = 4e-54 Identities = 161/175 (92%), Gaps = 7/175 (4%) Strand = Plus / Plus Query: 488 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 546 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 547 aatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccagg 604 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 605 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 729 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 783
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 555 bits (280), Expect = e-155 Identities = 349/368 (94%), Gaps = 3/368 (0%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| ||| |||||| || ||||||||||| ||||||||||||||||||| Sbjct: 102 acctttcaaactgc-tgccgaatccatgggcaggcaagag-acaacctggcgaactgaaa 159 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 catcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 219 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 220 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 279 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||||| || ||||||||||||||| |||||||||||||||||||||| Sbjct: 280 taggcgaagcggccgaacaccgcaccctagatggtgggagtccagtagccgaaagcatca 339 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 399 Query: 306 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 459 Query: 366 aaggtgaa 373 | |||||| Sbjct: 460 agggtgaa 467
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 531 bits (268), Expect = e-148 Identities = 319/332 (96%), Gaps = 3/332 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||| ||| ||||||||||||||||||| Sbjct: 334 acctttcaaactgc-tgctgaatccatgggcaggcaggag-acaacctggcgaactgaaa 277 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 306 gaccaccttgcaaggctaaatactcctgggtg 337 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 458 bits (231), Expect = e-125 Identities = 417/477 (87%), Gaps = 9/477 (1%) Strand = Plus / Plus Query: 183 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 242 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 243 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 302 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 303 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 362 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 363 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 422 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 423 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 482 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 483 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 542 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 599 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 653 Query: 543 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 602 || ||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 654 tc-taacagggcgattgtcactgcttatggacccgaacccgggtgatctatccatggcca 712 Query: 603 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||||||||| |||||| ||| ||||||||||||||||||||||||| ||||| Sbjct: 713 ggatgaagcttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaatca 769 Score = 186 bits (94), Expect = 6e-44 Identities = 112/118 (94%) Strand = Plus / Plus Query: 49 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctg 227 Query: 109 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 166 ||||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 228 agtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 450 bits (227), Expect = e-123 Identities = 416/477 (87%), Gaps = 9/477 (1%) Strand = Plus / Minus Query: 183 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 242 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 243 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 302 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 303 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 362 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 363 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 422 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 423 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 482 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 483 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 542 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 124666 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 124612 Query: 543 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 602 || ||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 124611 tc-taacagggcgattgtcactgcttatggacccgaacccgggtgatctatccatggcca 124553 Query: 603 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||||||||| |||| | ||| ||||||||||||||||||||||||| ||||| Sbjct: 124552 ggatgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatca 124496 Score = 450 bits (227), Expect = e-123 Identities = 416/477 (87%), Gaps = 9/477 (1%) Strand = Plus / Plus Query: 183 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 242 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 243 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 302 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 303 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 362 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 363 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 422 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 423 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 482 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 483 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 542 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 95200 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 95254 Query: 543 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 602 || ||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 95255 tc-taacagggcgattgtcactgcttatggacccgaacccgggtgatctatccatggcca 95313 Query: 603 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||||||||| |||| | ||| ||||||||||||||||||||||||| ||||| Sbjct: 95314 ggatgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatca 95370 Score = 186 bits (94), Expect = 6e-44 Identities = 112/118 (94%) Strand = Plus / Minus Query: 49 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125097 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctg 125038 Query: 109 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 166 ||||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 125037 agtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 124980 Score = 186 bits (94), Expect = 6e-44 Identities = 112/118 (94%) Strand = Plus / Plus Query: 49 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94769 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctg 94828 Query: 109 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 166 ||||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 94829 agtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 94886
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 444 bits (224), Expect = e-121 Identities = 357/399 (89%), Gaps = 8/399 (2%) Strand = Plus / Plus Query: 261 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 320 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 321 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 380 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 381 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 440 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 441 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 500 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 501 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 560 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 615 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 669 Query: 561 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 620 ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 670 cactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaa 729 Query: 621 actaagcagaggtccgaaccgactgatgttgaagaatca 659 | ||| ||||||||||||||||||||||||| ||||| Sbjct: 730 gccaagtggaggtccgaaccgactgatgttgaaaaatca 768 Score = 167 bits (84), Expect = 6e-38 Identities = 103/108 (95%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 37 aggcaagagtacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 96 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144 aggcaagag-acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 202 Query: 97 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 144 |||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 203 agcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 444 bits (224), Expect = e-121 Identities = 357/399 (89%), Gaps = 8/399 (2%) Strand = Plus / Plus Query: 261 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 320 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 321 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 380 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 381 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 440 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 441 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 500 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 627 Query: 501 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 560 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 628 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 682 Query: 561 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 620 ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 683 cactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaa 742 Query: 621 actaagcagaggtccgaaccgactgatgttgaagaatca 659 | ||| ||||||||||||||||||||||||| ||||| Sbjct: 743 gccaagtggaggtccgaaccgactgatgttgaaaaatca 781 Score = 167 bits (84), Expect = 6e-38 Identities = 103/108 (95%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 37 aggcaagagtacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 96 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 aggcaagag-acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 215 Query: 97 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 144 |||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 216 agcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 438 bits (221), Expect = e-119 Identities = 357/399 (89%), Gaps = 10/399 (2%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 441 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 442 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 501 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 732 Query: 502 gttaagggaacg-gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 560 ||||||| || ||| || |||||||||||||||||||||||| |||||||| ||| Sbjct: 733 gttaagg---cgtgaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgt 786 Query: 561 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 620 ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 787 cactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaa 846 Query: 621 actaagcagaggtccgaaccgactgatgttgaagaatca 659 | ||| ||||||||||||||||||||||||| ||||| Sbjct: 847 gccaagtggaggtccgaaccgactgatgttgaaaaatca 885 Score = 165 bits (83), Expect = 2e-37 Identities = 102/107 (95%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 37 aggcaagagtacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 96 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 aggcaagag-acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 319 Query: 97 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 143 |||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct: 320 agcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccg 366
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 438 bits (221), Expect = e-119 Identities = 375/423 (88%), Gaps = 10/423 (2%) Strand = Plus / Plus Query: 237 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 296 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 297 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 356 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 357 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 416 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 417 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 476 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 477 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 536 ||||||||||||| | |||||| ||||||||| |||| ||||||||||| ||||||| Sbjct: 608 ccggcgactcataagtagtggcctggttaagg----ggaa-ccaccggagccatagcgaa 662 Query: 537 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 596 ||| |||||| ||||||| | ||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 663 agcaagtcttcatagggcaaatgtcattgcttatgtacccgaacttgggtgatctaacca 722 Query: 597 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 656 ||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 723 tgaccaggatgaaatttggttgaaactaagtggaggtccgaaccgactgatgttgaagaa 782 Query: 657 tca 659 ||| Sbjct: 783 tca 785 Score = 131 bits (66), Expect = 3e-27 Identities = 143/168 (85%), Gaps = 3/168 (1%) Strand = Plus / Plus Query: 49 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 108 ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| | Sbjct: 161 aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaaaagttattcccat 220 Query: 109 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 168 ||||| ||||||||||| |||| |||||||||||| |||| |||||| || |||||| Sbjct: 221 agtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggtt---ggggagcaa 277 Query: 169 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 216 || ||| ||||| |||||| |||||| || |||| | | |||||||| Sbjct: 278 taaaagtattgtgttgctagacgaagcagtggagttctgaaccctaga 325
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 416 bits (210), Expect = e-113 Identities = 264/280 (94%), Gaps = 4/280 (1%) Strand = Plus / Plus Query: 222 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 281 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 282 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 342 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 401 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 402 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 461 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 462 ctgttgaagaatgagccggcgactcataggcagtggcttg 501 |||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtggcttg 278
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 98 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 157 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 158 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 216 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 217 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 276 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 277 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 336 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 337 gaccgata 344 |||||||| Sbjct: 241 gaccgata 248
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 404 bits (204), Expect = e-109 Identities = 514/612 (83%), Gaps = 14/612 (2%) Strand = Plus / Plus Query: 49 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 108 ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| | Sbjct: 162 aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaaaagttattcccat 221 Query: 109 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 168 ||||| ||| | |||| |||| ||||||||| || |||| ||||||| || ||||| Sbjct: 222 agtagtggcaaatgaaaagggaacagcctaaatcgctaaaatggggttgggg---agcaa 278 Query: 169 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 228 || ||| || || |||||| || || || |||| | | ||||||||||| | ||||| Sbjct: 279 taaaagtattttgttgctagacggagtagtggagttctgaaccctagatggtgagagtcc 338 Query: 229 agtagccgaaagcatcactagcttatgctctga-cccgagtagcatggggcacgtggaat 287 ||||| |||| |||| ||||||||||| | | ||||||||||||||| || |||||| Sbjct: 339 agtagtataaagtatcattagcttatgcttttaacccgagtagcatgggacatatggaat 398 Query: 288 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 347 |||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| | Sbjct: 399 cccgtgtgaatcagcaaggaccaccttgaaaggctaaatactcttgggtgaccaatagtg 458 Query: 348 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 407 ||||||||||||||||||| ||||||||||||||||| |||| |||||| |||||| ||| Sbjct: 459 aagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaactagaacatga 518 Query: 408 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 467 || | | ||| ||||||||||||||| || || | |||||||| |||||| |||| Sbjct: 519 aaac---atatgctaccaagcagtgggaggagacaggg--ctctgaccacgtgcccgttg 573 Query: 468 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 527 ||||||||| |||||||||||| | |||||| ||||||||| |||| |||||||||| Sbjct: 574 aagaatgagtcggcgactcataagtagtggcctggttaagg----ggaa-ccaccggagc 628 Query: 528 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 587 | |||||||||| |||||| |||||| | ||||| ||||| ||||||||||| |||||| Sbjct: 629 catagcgaaagcaagtcttcatagggaaaatgtcattgcttgtggacccgaacttgggtg 688 Query: 588 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 647 ||||| |||||||||||||| | |||| | |||||||| | |||| |||||||||||| Sbjct: 689 atctaaccatgaccaggatgcaatttggttaaaactaagtgggggtctgaaccgactgat 748 Query: 648 gttgaagaatca 659 |||||||||||| Sbjct: 749 gttgaagaatca 760
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 387 bits (195), Expect = e-104 Identities = 279/305 (91%), Gaps = 9/305 (2%) Strand = Plus / Plus Query: 355 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 414 |||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta 60 Query: 415 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 474 || ||||||||||||||||| || | | ||||||||||||||||||||||||||| Sbjct: 61 ---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatg 116 Query: 475 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 534 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 117 agccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcg 171 Query: 535 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 594 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 172 aaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatc 231 Query: 595 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 654 ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 232 catgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaag 291 Query: 655 aatca 659 ||||| Sbjct: 292 aatca 296
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 385 bits (194), Expect = e-103 Identities = 389/452 (86%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 207 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 266 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 267 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 326 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 327 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 386 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 387 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 446 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 447 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 506 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 4666 Query: 507 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 566 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4667 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactgt 4725 Query: 567 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 626 |||||||||||||| |||||||||| ||||| |||||||||||||||| | |||||||| Sbjct: 4726 ctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaag 4785 Query: 627 cagaggtccgaaccgactgatgttgaagaatc 658 ||||||| ||||||| ||||||||| |||| Sbjct: 4786 tggaggtccaaaccgaccgatgttgaaaaatc 4817 Score = 143 bits (72), Expect = 8e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 49 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 108 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 4200 aacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctg 4259 Query: 109 agtagcggcgagcgaaatgggagcagcctaaa 140 ||||||||||||||||||||||| |||||||| Sbjct: 4260 agtagcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 385 bits (194), Expect = e-103 Identities = 389/452 (86%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 207 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 266 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 267 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 326 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 327 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 386 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 387 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 446 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 447 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 506 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 507 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 566 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactgt 692 Query: 567 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 626 |||||||||||||| |||||||||| ||||| |||||||||||||||| | |||||||| Sbjct: 693 ctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaag 752 Query: 627 cagaggtccgaaccgactgatgttgaagaatc 658 ||||||| ||||||| ||||||||| |||| Sbjct: 753 tggaggtccaaaccgaccgatgttgaaaaatc 784 Score = 143 bits (72), Expect = 8e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 49 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 108 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 167 aacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctg 226 Query: 109 agtagcggcgagcgaaatgggagcagcctaaa 140 ||||||||||||||||||||||| |||||||| Sbjct: 227 agtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 385 bits (194), Expect = e-103 Identities = 389/452 (86%), Gaps = 4/452 (0%) Strand = Plus / Plus Query: 207 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 266 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 267 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 326 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 327 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 386 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 387 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 446 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 447 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 506 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 507 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 566 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactgt 692 Query: 567 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 626 |||||||||||||| |||||||||| ||||| |||||||||||||||| | |||||||| Sbjct: 693 ctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaag 752 Query: 627 cagaggtccgaaccgactgatgttgaagaatc 658 ||||||| ||||||| ||||||||| |||| Sbjct: 753 tggaggtccaaaccgaccgatgttgaaaaatc 784 Score = 143 bits (72), Expect = 8e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 49 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 108 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 167 aacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctg 226 Query: 109 agtagcggcgagcgaaatgggagcagcctaaa 140 ||||||||||||||||||||||| |||||||| Sbjct: 227 agtagcggcgagcgaaatgggagaagcctaaa 258
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 383 bits (193), Expect = e-103 Identities = 349/397 (87%), Gaps = 8/397 (2%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 441 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 442 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 501 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 614 Query: 502 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 561 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 615 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 669 Query: 562 actgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaa 621 |||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||| Sbjct: 670 actgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaa 729 Query: 622 ctaagcagaggtccgaaccgactgatgttgaagaatc 658 || || || |||||||||||| ||||||||| |||| Sbjct: 730 ctcagtggaagtccgaaccgaccgatgttgaaaaatc 766 Score = 143 bits (72), Expect = 8e-31 Identities = 90/96 (93%) Strand = Plus / Plus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 acaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 212 Query: 107 gtagtagcggcgagcgaaatgggagcagcctaaacc 142 |||||||||||||||||| |||| ||| ||||||| Sbjct: 213 ttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 383 bits (193), Expect = e-103 Identities = 349/397 (87%), Gaps = 8/397 (2%) Strand = Plus / Minus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 441 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 442 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 501 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 115048 Query: 502 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 561 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 115047 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 114993 Query: 562 actgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaa 621 |||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||| Sbjct: 114992 actgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaa 114933 Query: 622 ctaagcagaggtccgaaccgactgatgttgaagaatc 658 || || || |||||||||||| ||||||||| |||| Sbjct: 114932 ctcagtggaagtccgaaccgaccgatgttgaaaaatc 114896 Score = 383 bits (193), Expect = e-103 Identities = 349/397 (87%), Gaps = 8/397 (2%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 441 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 442 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 501 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 86940 Query: 502 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 561 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 86941 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 86995 Query: 562 actgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaa 621 |||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||| Sbjct: 86996 actgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaa 87055 Query: 622 ctaagcagaggtccgaaccgactgatgttgaagaatc 658 || || || |||||||||||| ||||||||| |||| Sbjct: 87056 ctcagtggaagtccgaaccgaccgatgttgaaaaatc 87092 Score = 143 bits (72), Expect = 8e-31 Identities = 90/96 (93%) Strand = Plus / Minus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115510 acaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 115451 Query: 107 gtagtagcggcgagcgaaatgggagcagcctaaacc 142 |||||||||||||||||| |||| ||| ||||||| Sbjct: 115450 ttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 143 bits (72), Expect = 8e-31 Identities = 90/96 (93%) Strand = Plus / Plus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86478 acaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 86537 Query: 107 gtagtagcggcgagcgaaatgggagcagcctaaacc 142 |||||||||||||||||| |||| ||| ||||||| Sbjct: 86538 ttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 383 bits (193), Expect = e-103 Identities = 255/272 (93%), Gaps = 4/272 (1%) Strand = Plus / Plus Query: 35 gcaggcaagagtacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 94 ||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2753 gcaggcaagag-acaacttggtgaactgaaacatcttagtagccagaggaaaagaaagca 2811 Query: 95 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2812 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 2871 Query: 155 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccc 212 |||||||||||| ||||||| || ||||||||||||||||| | ||| ||| |||||| Sbjct: 2872 ttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccc 2931 Query: 213 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 272 |||||||| | |||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 2932 tagatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacccgagtagca 2990 Query: 273 tggggcacgtggaatcccgtgtgaatcagcaa 304 | |||||||||||||||||||||||||||||| Sbjct: 2991 tagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 383 bits (193), Expect = e-103 Identities = 255/272 (93%), Gaps = 4/272 (1%) Strand = Plus / Plus Query: 35 gcaggcaagagtacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 94 ||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1008 gcaggcaagag-acaacttggtgaactgaaacatcttagtagccagaggaaaagaaagca 1066 Query: 95 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1067 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 1126 Query: 155 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccc 212 |||||||||||| ||||||| || ||||||||||||||||| | ||| ||| |||||| Sbjct: 1127 ttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccc 1186 Query: 213 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 272 |||||||| | |||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 1187 tagatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacccgagtagca 1245 Query: 273 tggggcacgtggaatcccgtgtgaatcagcaa 304 | |||||||||||||||||||||||||||||| Sbjct: 1246 tagggcacgtggaatcccgtgtgaatcagcaa 1277
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 373 bits (188), Expect = e-100 Identities = 191/192 (99%) Strand = Plus / Plus Query: 468 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 528 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 587 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 588 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 181 Query: 648 gttgaagaatca 659 |||||||||||| Sbjct: 182 gttgaagaatca 193
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 371 bits (187), Expect = 2e-99 Identities = 190/191 (99%) Strand = Plus / Plus Query: 469 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 529 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 588 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 589 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 180 Query: 649 ttgaagaatca 659 ||||||||||| Sbjct: 181 ttgaagaatca 191
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 369 bits (186), Expect = 8e-99 Identities = 285/314 (90%), Gaps = 3/314 (0%) Strand = Plus / Minus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||| ||||||| |||||||||| || ||||||||||| |||||||||| |||||||| Sbjct: 3689 acctttcaaactgc-tgctgaatccatgggcaggcaagag-acaacctggcaaactgaaa 3632 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||| ||||||||||||| || |||| |||| Sbjct: 3631 tatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgagtgaaa 3572 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 185 ||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| |||| || Sbjct: 3571 tgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagtgccgc 3512 Query: 186 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 245 ||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||||||| Sbjct: 3511 taggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaagcatcc 3452 Query: 246 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 305 |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 3451 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaattagcaag 3392 Query: 306 gaccaccttgcaag 319 |||||||||||||| Sbjct: 3391 gaccaccttgcaag 3378 Score = 157 bits (79), Expect = 6e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Minus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 568 tatggacccgaacct 582 ||||||||||||||| Sbjct: 3134 tatggacccgaacct 3120 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 328 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 387 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 388 ggtagtgaaatagaacgtgaaacc 411 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 601 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 659 ||||||| ||||||| |||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatca 3053
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 361 bits (182), Expect = 2e-96 Identities = 275/303 (90%), Gaps = 11/303 (3%) Strand = Plus / Plus Query: 357 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 416 |||||||||| |||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 1 cgtgagggaagggtgaaaagaaccc--atcggggagtgaaatagaacatgaaaccgta-- 56 Query: 417 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 476 || ||||||||||||||||| || | | ||||||||||||||||||||||||||||| Sbjct: 57 -agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgag 114 Query: 477 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 536 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 115 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 169 Query: 537 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 596 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 229 Query: 597 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 656 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 230 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 289 Query: 657 tca 659 ||| Sbjct: 290 tca 292
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 357 bits (180), Expect = 3e-95 Identities = 342/394 (86%), Gaps = 9/394 (2%) Strand = Plus / Plus Query: 266 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 325 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 326 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 385 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 386 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 445 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaaccata---agctttcaagcagtgggaggaggattga 561 Query: 446 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 505 | || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621 Query: 506 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 565 |||||| |||||| |||| |||||||||| |||||| |||||||||||||||| Sbjct: 622 agggaat-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactg 675 Query: 566 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 625 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| || Sbjct: 676 tttatggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaa 735 Query: 626 gcagaggtccgaaccgactgatgttgaagaatca 659 | ||||||||||||||||||||||||| ||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatca 769 Score = 147 bits (74), Expect = 5e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| || Sbjct: 176 gaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattccctcagtagtgg 235 Query: 117 cgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 162 ||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 236 cgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 355 bits (179), Expect = 1e-94 Identities = 345/399 (86%), Gaps = 11/399 (2%) Strand = Plus / Plus Query: 261 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 320 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 321 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 380 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 381 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 440 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 441 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 500 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| | Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcct 573 Query: 501 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 560 ||||||| ||| || ||||||||||||||||| |||| | || |||| ||| Sbjct: 574 ggttaagagaa-------tactggagccgtagcgaaagcaagtcat-atttggcgcatgt 625 Query: 561 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 620 ||||| |||| |||||||||| |||||||||||||||| ||||| |||| ||||| |||| Sbjct: 626 cactgtttatagacccgaacccgggtgatctatccatggccagggtgaaacttgggtgaa 685 Query: 621 actaagcagaggtccgaaccgactgatgttgaagaatca 659 | ||| ||||||||||||||||||||||||| ||||| Sbjct: 686 gccaagtggaggtccgaaccgactgatgttgaaaaatca 724 Score = 155 bits (78), Expect = 2e-34 Identities = 90/94 (95%) Strand = Plus / Plus Query: 49 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctc 181 Query: 109 agtagcggcgagcgaaatgggagcagcctaaacc 142 ||||| |||||||||||||||| ||||||||||| Sbjct: 182 agtagtggcgagcgaaatgggaacagcctaaacc 215
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 207 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 266 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 267 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 326 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 327 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 386 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 387 gggtagtgaaatagaacgtgaaaccgt 413 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 345 bits (174), Expect = 1e-91 Identities = 348/404 (86%), Gaps = 4/404 (0%) Strand = Plus / Plus Query: 255 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 314 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 315 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 374 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 375 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 434 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 435 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 494 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 495 tggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc 554 ||||| ||||||||||| | ||| |||||| |||||||||| |||||| ||||| Sbjct: 617 tggctgggttaagggaa-tttatgcactggagccatagcgaaagcaagtcttttcagggc 675 Query: 555 gattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttg 614 |||||||||| |||||||||||||| |||||||||| ||||| ||||||||||||||| Sbjct: 676 tattgtcactgtctatggacccgaacccgggtgatctaaccatggccaggatgaagcttg 735 Query: 615 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 658 | |||||||||| ||||||| ||||||| ||||||||| |||| Sbjct: 736 ggtgaaactaagtggaggtcccaaccgaccgatgttgaaaaatc 779 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 166 acaacctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgatttcc 225 Query: 107 gtagtagcggcgagcgaaatgggagcagcctaaa 140 ||||||||||||||||||||||| |||||||| Sbjct: 226 tgagtagcggcgagcgaaatgggagaagcctaaa 259
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 341 bits (172), Expect = 2e-90 Identities = 202/212 (95%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 236 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||||||||| Sbjct: 237 ggaggtccgaaccgactgatgttgaagaatca 268
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 341 bits (172), Expect = 2e-90 Identities = 202/212 (95%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 161 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 220 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||||||||| Sbjct: 221 ggaggtccgaaccgactgatgttgaagaatca 252
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 356 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 415 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 416 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 475 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 476 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 107875
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 325 bits (164), Expect = 1e-85 Identities = 201/212 (94%), Gaps = 6/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177520 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 177579 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 |||||||| |||||||||||||||||||||| Sbjct: 177580 ggaggtccg-accgactgatgttgaagaatca 177610 Score = 319 bits (161), Expect = 6e-84 Identities = 227/245 (92%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 21 ctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaacatcttagtagcca 79 ||||||||||| || ||||||||||| | |||| |||||||||||| ||||||||||||| Sbjct: 177169 ctgctgaatccatgggcaggcaagag-agaaccaggcgaactgaaagatcttagtagcca 177227 Query: 80 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 177228 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgggcgaaatgggagctgcctaa 177287 Query: 140 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggt 198 |||||||||||||||||||||||||||||||||||||| |||| |||||||||||| | Sbjct: 177288 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgcagctaggcgaagcagcc 177347 Query: 199 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 258 || ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 177348 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttaggctc 177407 Query: 259 tgacc 263 ||||| Sbjct: 177408 tgacc 177412 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 336 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 336 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 55 gcgaactgaaacatcttagtagc 77 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 55 gcgaactgaaacatcttagtagc 77 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 317 bits (160), Expect = 3e-83 Identities = 245/270 (90%), Gaps = 10/270 (3%) Strand = Plus / Plus Query: 391 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 450 ||||||||||||| ||||||||| |||||||||||||||||||| | || ||| Sbjct: 364690 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctc 364745 Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364746 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 364805 Query: 511 acggaacccaccggagccgtagcgaaag-cgagtcttaatagggcgattgtcactgctta 569 || ||||||||||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 364806 ac-----ccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgctta 364860 Query: 570 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 629 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | Sbjct: 364861 tggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtgg 364920 Query: 630 aggtccgaaccgactgatgttgaagaatca 659 |||||||||||||||||||||||| ||||| Sbjct: 364921 aggtccgaaccgactgatgttgaaaaatca 364950 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 336 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 11520 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 11475
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 311 bits (157), Expect = 2e-81 Identities = 334/393 (84%), Gaps = 10/393 (2%) Strand = Plus / Plus Query: 261 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 320 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 321 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 380 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 381 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 440 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 441 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 500 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcct 1020 Query: 501 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 560 ||||||||| | |||| |||||||||||||||||||| | |||||| ||| Sbjct: 1021 ggttaagggta-------taccgaagccgtagcgaaagcgagtcattcaagggcgcatgt 1073 Query: 561 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 620 ||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||| |||| Sbjct: 1074 cactgtttatggacccgaacccgggtgatctatccatggccagggtgaagcttgggtgaa 1133 Query: 621 actaagcagaggtccgaaccgactgatgttgaa 653 | ||| |||| |||||||||||| ||||||| Sbjct: 1134 gccaagtggaggcccgaaccgactggtgttgaa 1166 Score = 139 bits (70), Expect = 1e-29 Identities = 91/98 (92%) Strand = Plus / Plus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 566 acaacctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattccc 625 Query: 107 gtagtagcggcgagcgaaatgggagcagcctaaaccgt 144 |||||| ||||||||||| |||| ||||||||||||| Sbjct: 626 ttagtagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 303 bits (153), Expect = 4e-79 Identities = 300/345 (86%), Gaps = 13/345 (3%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 441 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 442 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 501 ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 604 Query: 502 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc---gatt 558 ||||||| | | | |||||||| |||||||||||||||| |||||||| || Sbjct: 605 gttaaggaa----attcatccggagccatagcgaaagcgagtctgaatagggcattaatg 660 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccag 603 |||||| |||||||||||||||| || ||||||||||||| |||| Sbjct: 661 gtcacttcttatggacccgaaccgggatgatctatccatggccag 705 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 |||||| || ||| ||||||||||||||| || |||||||||||||||||||||||| || Sbjct: 145 acaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcgatttcc 204 Query: 107 gtagtagcggcgagcgaa 124 ||||||||||||||||| Sbjct: 205 ttagtagcggcgagcgaa 222
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 301 bits (152), Expect = 2e-78 Identities = 169/172 (98%), Gaps = 2/172 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 123 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 181 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 241 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 177 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 301 bits (152), Expect = 2e-78 Identities = 169/172 (98%), Gaps = 2/172 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 123 accttttgaactgcctgctgaatccatgagcaggcaagag-acaacctggcgaactgaaa 181 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 241 Query: 126 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 177 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 215 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 273 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 274 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 333 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 334 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 393 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 394 gaaatagaacgtgaaaccgtgctgagctcc 423 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 215 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 273 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 274 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 333 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 334 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 393 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 394 gaaatagaacgtgaaaccgtgctgagctcc 423 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 289 bits (146), Expect = 6e-75 Identities = 341/400 (85%), Gaps = 12/400 (3%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 380 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 381 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 440 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 441 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 500 | | |||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589 Query: 501 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc--gatt 558 ||||||||| ||| | ||| |||| ||||||||| ||||| |||||||| || Sbjct: 590 ggttaaggg---ggattac-ccgaagccaaagcgaaagcaagtctgaatagggcaaaatc 645 Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 618 |||||| ||| ||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 646 gtcactttttagggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 705 Query: 619 aaactaagcagaggtccgaaccgactgatgttgaagaatc 658 |||| ||| ||||||||||||||| ||||||||| |||| Sbjct: 706 aaaccaagtggaggtccgaaccgaccgatgttgaaaaatc 745 Score = 123 bits (62), Expect = 8e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 48 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 107 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 108 tagtagcggcgagcgaaatgggagcagcctaaac 141 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 215 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 273 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 274 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 333 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 334 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 393 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 394 gaaatagaacgtgaaaccgtgctgagctcc 423 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 54.0 bits (27), Expect = 6e-04 Identities = 111/138 (80%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 471 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 530 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9056578 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9056637 Query: 531 agcgaaagcgagtcttaatagggcgattgtcactgcttatg--gacccgaacctgggtga 588 ||||||||||| |||||||||| | ||| ||||| |||| | || |||||| | ||||| Sbjct: 9056638 agcgaaagcgactcttaataggacaattttcactacttacggagatccgaacttaggtga 9056697 Query: 589 tctatccatgaccaggat 606 | |||||||||| ||||| Sbjct: 9056698 tttatccatgactaggat 9056715 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 416 tgagctcccaagcagtgggaggggaaagtgatc 448 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 215 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 273 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 274 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 333 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 334 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 393 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 394 gaaatagaacgtgaaaccgtgctgagctcc 423 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 54.0 bits (27), Expect = 6e-04 Identities = 111/138 (80%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 471 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 530 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9128275 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9128334 Query: 531 agcgaaagcgagtcttaatagggcgattgtcactgcttatg--gacccgaacctgggtga 588 ||||||||||| |||||||||| | ||| ||||| |||| | || |||||| | ||||| Sbjct: 9128335 agcgaaagcgactcttaataggacaattttcactacttacggagatccgaacttaggtga 9128394 Query: 589 tctatccatgaccaggat 606 | |||||||||| ||||| Sbjct: 9128395 tttatccatgactaggat 9128412 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 416 tgagctcccaagcagtgggaggggaaagtgatc 448 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 280 bits (141), Expect = 6e-72 Identities = 196/213 (92%), Gaps = 6/213 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 506 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 507 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 566 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 567 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 626 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 194 Query: 627 cagaggtccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||||||||| Sbjct: 195 tggaggtccgaaccgactgatgttgaagaatca 227
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 274 bits (138), Expect = 3e-70 Identities = 222/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 441 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 442 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 501 | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 643 Query: 502 gttaagg 508 ||||||| Sbjct: 644 gttaagg 650 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 48 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 107 ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||||| || Sbjct: 154 caacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcgatttcct 213 Query: 108 tagtagcggcgagcgaaatgggagcagcctaaac 141 ||||||||||||||||| || | |||||||||| Sbjct: 214 gagtagcggcgagcgaaacggaatcagcctaaac 247 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagc 611 |||||| |||||||||||||||| || ||||||| |||| |||| ||||||| Sbjct: 722 gtcacttcttatggacccgaaccgggatgatctaggcatggccagaatgaagc 774
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 260 bits (131), Expect = 5e-66 Identities = 223/253 (88%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 256 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 315 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 316 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 375 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 376 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 435 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 436 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 495 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 496 ggcttggttaagg 508 ||| ||||||||| Sbjct: 575 ggcctggttaagg 587 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 49 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 108 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 109 agtagcggcgagcgaaatgggagcagcctaaacc 142 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 123 bits (62), Expect = 8e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 520 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 579 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 580 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 639 || |||||||||||||||| ||||||||||| |||| |||||| || ||||||||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaac 711 Query: 640 cgactgatgttgaa 653 |||||| ||||||| Sbjct: 712 cgactggtgttgaa 725
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 252 bits (127), Expect = 1e-63 Identities = 142/147 (96%) Strand = Plus / Plus Query: 513 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 572 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 573 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 632 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 633 tccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatca 151
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 242 bits (122), Expect = 1e-60 Identities = 217/247 (87%), Gaps = 5/247 (2%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 441 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 442 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 501 ||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttg 610 Query: 502 gttaagg 508 ||||||| Sbjct: 611 gttaagg 617 Score = 133 bits (67), Expect = 8e-28 Identities = 82/87 (94%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 |||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||| Sbjct: 163 gaactgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccttagtagcgg 222 Query: 117 cgagcgaaatgggagcagcctaaaccg 143 ||||||||| |||| |||||||||||| Sbjct: 223 cgagcgaaacgggaccagcctaaaccg 249 Score = 95.6 bits (48), Expect = 2e-16 Identities = 114/136 (83%) Strand = Plus / Plus Query: 520 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 579 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 580 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 639 || |||||||||| ||||| |||||| ||||||||| |||||| | || |||||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaac 743 Query: 640 cgactgatgttgaaga 655 |||| || |||||||| Sbjct: 744 cgaccgacgttgaaga 759
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 5e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 190 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 249 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 250 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 309 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 310 accttgcaaggctaaatactcctgggtgaccga 342 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 240 bits (121), Expect = 5e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 441 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 442 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 48 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 107 |||||| | ||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 154 caacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgattccct 213 Query: 108 tagtagcggcgagcgaaatgggagcagcctaaaccg 143 |||||||||||||| || |||| |||||||||||| Sbjct: 214 gagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 111 bits (56), Expect = 3e-21 Identities = 116/136 (85%) Strand = Plus / Plus Query: 523 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 582 |||||| |||||||||||||||| ||||||||| |||| || |||||||||||||| Sbjct: 650 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 709 Query: 583 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 642 |||||||||| ||||| |||||||||||||||| | |||| ||| || | ||||||||| Sbjct: 710 gggtgatctaaccatggccaggatgaagcttgggtaaaacgaagtggaagaccgaaccga 769 Query: 643 ctgatgttgaagaatc 658 | ||||||||| |||| Sbjct: 770 ccgatgttgaaaaatc 785
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 240 bits (121), Expect = 5e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 441 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 442 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 48 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 107 |||||| | ||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 1920 caacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgattccct 1979 Query: 108 tagtagcggcgagcgaaatgggagcagcctaaaccg 143 |||||||||||||| || |||| |||||||||||| Sbjct: 1980 gagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 111 bits (56), Expect = 3e-21 Identities = 116/136 (85%) Strand = Plus / Plus Query: 523 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 582 |||||| |||||||||||||||| ||||||||| |||| || |||||||||||||| Sbjct: 2419 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 2478 Query: 583 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 642 |||||||||| ||||| |||||||||||||||| | |||| ||| || | ||||||||| Sbjct: 2479 gggtgatctaaccatggccaggatgaagcttgggtaaaacgaagtggaagaccgaaccga 2538 Query: 643 ctgatgttgaagaatc 658 | ||||||||| |||| Sbjct: 2539 ccgatgttgaaaaatc 2554
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 240 bits (121), Expect = 5e-60 Identities = 188/209 (89%), Gaps = 6/209 (2%) Strand = Plus / Plus Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 510 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 511 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 570 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 571 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 630 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 740 Query: 631 ggtccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||| ||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatca 769 Score = 194 bits (98), Expect = 3e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 266 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 325 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 326 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 385 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 386 tgggtagtgaaatagaacgtgaaacc 411 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 151 bits (76), Expect = 3e-33 Identities = 100/108 (92%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||| || Sbjct: 176 gaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagtagtgg 235 Query: 117 cgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 164 ||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 236 cgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 283
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 240 bits (121), Expect = 5e-60 Identities = 188/209 (89%), Gaps = 6/209 (2%) Strand = Plus / Plus Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 510 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 511 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 570 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 571 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 630 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 3715 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 3774 Query: 631 ggtccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||| ||||| Sbjct: 3775 ggtccgaaccgactgatgttgaaaaatca 3803 Score = 194 bits (98), Expect = 3e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 266 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 325 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 326 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 385 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 386 tgggtagtgaaatagaacgtgaaacc 411 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 151 bits (76), Expect = 3e-33 Identities = 100/108 (92%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||| || Sbjct: 3210 gaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagtagtgg 3269 Query: 117 cgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 164 ||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 3270 cgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 3317
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 209 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 268 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 269 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 328 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 329 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 388 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 389 gtagtgaaatagaacgtgaaa 409 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 220 bits (111), Expect = 4e-54 Identities = 188/212 (88%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 ||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 681 tatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaagt 740 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||||||||| Sbjct: 741 ggaggtccgaaccgactgatgttgaagaatca 772 Score = 97.6 bits (49), Expect = 4e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 49 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 108 ||||||| |||||||| ||||||||||| |||||||||| |||||||||| ||| || | Sbjct: 163 aacctggtgaactgaatcatcttagtagacagaggaaaataaagcaaaagttattaccat 222 Query: 109 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 157 ||||| |||||| |||| |||| |||||||||||| |||| ||||||| Sbjct: 223 agtagtggcgagtgaaaagggaacagcctaaaccgctaaaatggggttg 271
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 230 bits (116), Expect = 5e-57 Identities = 126/128 (98%), Gaps = 1/128 (0%) Strand = Plus / Minus Query: 33 gagcaggcaagagtacaacctggcgaactgaaacatcttagtagccagaggaaaagaaag 92 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79619 gagcaggcaagag-acaacctggcgaactgaaacatcttagtagccagaggaaaagaaag 79561 Query: 93 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 152 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 79560 caaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacgg 79501 Query: 153 ggttgtgg 160 |||||||| Sbjct: 79500 ggttgtgg 79493
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 224 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 283 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 284 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 343 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 344 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 403 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 404 gtgaaa 409 ||||| Sbjct: 504 atgaaa 509 Score = 109 bits (55), Expect = 1e-20 Identities = 174/212 (82%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| ||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatca 748 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 117 cgagcgaaatgggagcagcctaa 139 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 224 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 283 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 284 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 343 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 344 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 403 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 404 gtgaaa 409 ||||| Sbjct: 503 atgaaa 508 Score = 101 bits (51), Expect = 3e-18 Identities = 173/212 (81%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| || |||||||||||||||| Sbjct: 716 ggaggtccgaacagattgatgttgaagaatca 747 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 117 cgagcgaaatgggagcagcctaa 139 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 224 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 283 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 284 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 343 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 344 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 403 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 404 gtgaaa 409 ||||| Sbjct: 504 atgaaa 509 Score = 109 bits (55), Expect = 1e-20 Identities = 174/212 (82%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| ||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatca 748 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 117 cgagcgaaatgggagcagcctaa 139 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 224 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 283 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 284 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 343 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 344 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 403 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 404 gtgaaa 409 ||||| Sbjct: 504 atgaaa 509 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 564 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 623 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 624 aagcagaggtccgaaccgactgatgttgaagaatca 659 ||| ||||||||||| ||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatca 748 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 117 cgagcgaaatgggagcagcctaa 139 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 508 gg 509 || Sbjct: 602 gg 603
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 224 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 283 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 284 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 343 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 344 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 403 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 404 gtgaaa 409 ||||| Sbjct: 504 atgaaa 509 Score = 109 bits (55), Expect = 1e-20 Identities = 174/212 (82%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| ||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatca 748 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 117 cgagcgaaatgggagcagcctaa 139 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 224 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 283 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 284 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 343 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 344 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 403 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 404 gtgaaa 409 ||||| Sbjct: 504 atgaaa 509 Score = 109 bits (55), Expect = 1e-20 Identities = 174/212 (82%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| ||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatca 748 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 117 cgagcgaaatgggag 131 ||| ||||| ||||| Sbjct: 232 cgaacgaaaagggag 246
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 224 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 283 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 284 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 343 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 344 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 403 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 404 gtgaaa 409 ||||| Sbjct: 503 atgaaa 508 Score = 109 bits (55), Expect = 1e-20 Identities = 174/212 (82%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| ||||||||||||||||||| Sbjct: 716 ggaggtccgaacagactgatgttgaagaatca 747 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 117 cgagcgaaatgggagcagcctaa 139 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 224 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 283 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 284 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 343 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 344 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 403 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 404 gtgaaa 409 ||||| Sbjct: 504 atgaaa 509 Score = 109 bits (55), Expect = 1e-20 Identities = 174/212 (82%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| ||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatca 748 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 117 cgagcgaaatgggagcagcctaa 139 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 224 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 283 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 284 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 343 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 344 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 403 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 404 gtgaaa 409 ||||| Sbjct: 504 atgaaa 509 Score = 109 bits (55), Expect = 1e-20 Identities = 174/212 (82%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| ||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatca 748 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 117 cgagcgaaatgggagcagcctaa 139 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 224 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 283 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 284 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 343 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 344 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 403 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 404 gtgaaa 409 ||||| Sbjct: 504 atgaaa 509 Score = 109 bits (55), Expect = 1e-20 Identities = 174/212 (82%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| ||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatca 748 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 117 cgagcgaaatgggagcagcctaa 139 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 224 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 283 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 284 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 343 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 344 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 403 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 404 gtgaaa 409 ||||| Sbjct: 504 atgaaa 509 Score = 109 bits (55), Expect = 1e-20 Identities = 174/212 (82%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| ||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatca 748 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 49 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 108 |||| |||||||||||||||||||||| ||||||||||| |||||||||| |||||| | Sbjct: 164 aacccggcgaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccat 223 Query: 109 agtagcggcgagcgaaatgggagcagcctaa 139 ||||| ||||| ||||| |||| || ||||| Sbjct: 224 agtagtggcgaacgaaaagggaacaacctaa 254
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 224 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 283 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 284 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 343 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 344 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 403 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 404 gtgaaa 409 ||||| Sbjct: 504 atgaaa 509 Score = 109 bits (55), Expect = 1e-20 Identities = 174/212 (82%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| ||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatca 748 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 117 cgagcgaaatgggagcagcctaa 139 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 224 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 283 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 284 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 343 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 344 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 403 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 404 gtgaaa 409 ||||| Sbjct: 504 atgaaa 509 Score = 109 bits (55), Expect = 1e-20 Identities = 174/212 (82%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| ||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatca 748 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 117 cgagcgaaatgggagcagcctaa 139 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 224 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 283 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 284 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 343 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 344 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 403 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 404 gtgaaa 409 ||||| Sbjct: 504 atgaaa 509 Score = 109 bits (55), Expect = 1e-20 Identities = 174/212 (82%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| ||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatca 748 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 117 cgagcgaaatgggagcagcctaa 139 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 224 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 283 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 284 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 343 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 344 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 403 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 404 gtgaaa 409 ||||| Sbjct: 504 atgaaa 509 Score = 109 bits (55), Expect = 1e-20 Identities = 174/212 (82%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| ||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatca 748 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 117 cgagcgaaatgggagcagcctaa 139 ||| ||||| |||| || ||||| Sbjct: 232 cgaacgaaaagggaacaacctaa 254
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 439 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 500 tggttaagg 508 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 117 cgagcgaaatgggagcagcctaaacc 142 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccag 603 |||||| |||||||||||||||| |||||||||| ||||||||| Sbjct: 683 gtcacttcttatggacccgaacccgggtgatctaatcatgaccag 727
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 439 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 500 tggttaagg 508 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 117 cgagcgaaatgggagcagcctaaacc 142 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccag 603 |||||| |||||||||||||||| |||||||||| ||||||||| Sbjct: 683 gtcacttcttatggacccgaacccgggtgatctaatcatgaccag 727
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 214 bits (108), Expect = 3e-52 Identities = 206/237 (86%), Gaps = 5/237 (2%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 441 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 442 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 48 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 107 |||||||| |||||||||||||| ||||||||||||| ||||| ||||||||||||||| Sbjct: 154 caacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcgattccct 213 Query: 108 tagtagcggcgagcgaaatggga 130 ||||||||||||||||||||||| Sbjct: 214 tagtagcggcgagcgaaatggga 236 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 559 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 610 |||||| ||||||||||||||||||| ||||||| |||||| || ||||||| Sbjct: 806 gtcacttcttatggacccgaacctggatgatctaaccatgagcatgatgaag 857
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccg 412 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 |||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||||| Sbjct: 155 gaactgaaacatctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcgg 214 Query: 117 cgagcgaaatgggagcagcctaaacc 142 ||||||||| |||| ||||||||||| Sbjct: 215 cgagcgaaaagggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 3e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 450 ctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831 Score = 50.1 bits (25), Expect = 0.009 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand = Plus / Plus Query: 531 agcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtga 588 ||||||||||||||| |||||||| | |||| | |||| ||||||||||| || || Sbjct: 873 agcgaaagcgagtctgaatagggcatataagtcatttcttacggacccgaacccggtcga 932 Query: 589 tctatccatgaccaggatgaagct 612 |||| ||||| ||||||||||||| Sbjct: 933 tctaaccatgtccaggatgaagct 956
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 224 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 283 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 284 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 343 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 344 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 403 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 404 gtgaaa 409 ||||| Sbjct: 504 atgaaa 509 Score = 109 bits (55), Expect = 1e-20 Identities = 174/212 (82%), Gaps = 5/212 (2%) Strand = Plus / Plus Query: 448 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 507 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 508 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 567 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 628 agaggtccgaaccgactgatgttgaagaatca 659 ||||||||||| ||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatca 748 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||| || Sbjct: 172 gaactgaaacatcttagtatccagaggaaaataaagcaaaagttattcccatagtagtgg 231 Query: 117 cgagcgaaatgggag 131 ||| ||||| ||||| Sbjct: 232 cgaacgaaaagggag 246
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 7e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgt 413 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 |||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 156 gaactgaaacatctaagtagccggaggaaaagaaagcaaaagcgattcccttagtagcgg 215 Query: 117 cgagcgaaatgggagcagcctaaacc 142 ||||||||| |||| ||||||||||| Sbjct: 216 cgagcgaaaagggaacagcctaaacc 241 Score = 73.8 bits (37), Expect = 6e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 566 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 625 |||| ||||||||||| || |||||| ||||| |||||||||||||||| | | ||||| Sbjct: 1030 cttacggacccgaacccggtcgatctaaccatgtccaggatgaagcttgggtaacactaa 1089 Query: 626 gcagaggtccgaaccgactgatgttgaagaatc 658 | |||||||| |||||| ||||||||| |||| Sbjct: 1090 gtagaggtcccgaccgaccgatgttgaaaaatc 1122 Score = 71.9 bits (36), Expect = 3e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 450 ctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 7e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgt 413 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 61 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 120 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 121 cgaaatgggagcagcctaaacc 142 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 570 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 629 |||||||||||| |||||||||| ||||||||||||||||||||| | | |||||| | Sbjct: 712 tggacccgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacactaagtgg 771 Query: 630 aggtccgaaccgactgatgttgaagaatc 658 |||||||||||||| ||||||||| |||| Sbjct: 772 aggtccgaaccgaccgatgttgaaaaatc 800 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 449 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 ||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 532 gcgaaagcgagtcttaatagggcga 556 |||||||||||||| |||||||||| Sbjct: 665 gcgaaagcgagtctgaatagggcga 689
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 206 bits (104), Expect = 7e-50 Identities = 207/238 (86%), Gaps = 10/238 (4%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 439 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 497 | | || | |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 665 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 117 cgagcgaaatgggagcagcctaaacc 142 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 81.8 bits (41), Expect = 3e-12 Identities = 76/87 (87%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 520 accggagccgtagcgaaagcgagtcttaatagggcgatt---gtcactgcttatggaccc 576 ||||||||| ||||||||||||||| ||||||||| || |||||| |||||||||| Sbjct: 685 accggagcccaagcgaaagcgagtctgaatagggcgcttatagtcactttttatggaccc 744 Query: 577 gaacctgggtgatctatccatgaccag 603 ||||| ||||||||||| ||||||||| Sbjct: 745 gaacccgggtgatctattcatgaccag 771
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 202 bits (102), Expect = 1e-48 Identities = 217/248 (87%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 380 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 381 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 440 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 441 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 500 ||| | |||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggcca 674 Query: 501 ggttaagg 508 |||||||| Sbjct: 675 ggttaagg 682 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 48 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 107 ||||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 147 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccg 206 Query: 108 tagtagcggcgagcgaaatgggagcagcctaaaccg 143 ||||||||||||||||| |||| |||||||||||| Sbjct: 207 gagtagcggcgagcgaaacgggaacagcctaaaccg 242 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/97 (85%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcgattg--tcactgcttatggacccga 578 |||||||| ||||||||| ||||| ||||||||| || ||||| ||||||||||||| Sbjct: 691 ccggagcctaagcgaaagcaagtctgaatagggcgtatgagtcacttcttatggacccga 750 Query: 579 acctgggtgatctatccatgaccaggatgaagcttgg 615 ||| |||||||||| | |||||||||||||| |||| Sbjct: 751 acccgggtgatctaatcctgaccaggatgaagtttgg 787
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 1e-48 Identities = 117/122 (95%) Strand = Plus / Plus Query: 261 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 320 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 321 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 380 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 381 cc 382 || Sbjct: 493 cc 494 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Plus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 154 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgcgattccc 213 Query: 107 gtagtagcggcgagcgaaatgggagcagcctaaaccg 143 ||||||||||||||||| |||| ||||||||||| Sbjct: 214 ttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 452 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 508 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 558 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 613 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 1e-48 Identities = 135/146 (92%) Strand = Plus / Plus Query: 266 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 325 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 326 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 385 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 386 tgggtagtgaaatagaacgtgaaacc 411 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 131 bits (66), Expect = 3e-27 Identities = 96/106 (90%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||| || Sbjct: 1943 gaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagtagtgg 2002 Query: 117 cgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 162 ||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 2003 cgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Minus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 380 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 381 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 439 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 155604 Query: 500 tggttaagg 508 |||||||| Sbjct: 155603 gggttaagg 155595 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 380 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 381 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 439 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 440 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 78288 Query: 500 tggttaagg 508 |||||||| Sbjct: 78289 gggttaagg 78297 Score = 141 bits (71), Expect = 3e-30 Identities = 89/95 (93%) Strand = Plus / Minus Query: 48 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 107 ||||| || |||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 156132 caacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcgattcccg 156073 Query: 108 tagtagcggcgagcgaaatgggagcagcctaaacc 142 |||||||||||||||||||||| ||||||||||| Sbjct: 156072 gagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 141 bits (71), Expect = 3e-30 Identities = 89/95 (93%) Strand = Plus / Plus Query: 48 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 107 ||||| || |||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 77760 caacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcgattcccg 77819 Query: 108 tagtagcggcgagcgaaatgggagcagcctaaacc 142 |||||||||||||||||||||| ||||||||||| Sbjct: 77820 gagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 105 bits (53), Expect = 2e-19 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Minus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 578 |||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 155586 ccggagcccaagcgaaagcgagtctgaatagggcgatacagtcacttcttatggacccga 155527 Query: 579 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 638 |||||| ||||||| |||| ||||| |||||||||| | | || ||| |||| ||||| Sbjct: 155526 acctggatgatctaatcatggccaggttgaagcttgggtaacaccaagtcgaggaccgaa 155467 Query: 639 ccgactgatgttgaagaatc 658 ||||| ||||||||| |||| Sbjct: 155466 ccgaccgatgttgaaaaatc 155447 Score = 105 bits (53), Expect = 2e-19 Identities = 119/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 578 |||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 78306 ccggagcccaagcgaaagcgagtctgaatagggcgatacagtcacttcttatggacccga 78365 Query: 579 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 638 |||||| ||||||| |||| ||||| |||||||||| | | || ||| |||| ||||| Sbjct: 78366 acctggatgatctaatcatggccaggttgaagcttgggtaacaccaagtcgaggaccgaa 78425 Query: 639 ccgactgatgttgaagaatc 658 ||||| ||||||||| |||| Sbjct: 78426 ccgaccgatgttgaaaaatc 78445
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 322 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 380 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 381 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 438 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 499 tt 500 || Sbjct: 636 tt 637 Score = 107 bits (54), Expect = 5e-20 Identities = 111/129 (86%), Gaps = 2/129 (1%) Strand = Plus / Plus Query: 532 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtgat 589 |||||||||||||| ||||||||| || |||| | | | |||||||||||| ||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaacccgggtgat 726 Query: 590 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 649 ||| ||||||||||||||||||||| | | |||||| ||||||||||||||| ||||| Sbjct: 727 ctaatcatgaccaggatgaagcttgggtaacactaagtggaggtccgaaccgaccgatgt 786 Query: 650 tgaagaatc 658 |||| |||| Sbjct: 787 tgaaaaatc 795 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 61 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 120 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 121 cgaa 124 |||| Sbjct: 238 cgaa 241
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgt 413 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 61 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 121 cgaaatgggagcagcctaaacc 142 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 83.8 bits (42), Expect = 7e-13 Identities = 116/138 (84%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 580 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 581 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 640 | |||||||||| |||| |||||||||| |||| | | || || | |||||||||||| Sbjct: 878 ccgggtgatctaatcatggccaggatgaaatttgggtaacaccaaccggaggtccgaacc 937 Query: 641 gactgatgttgaagaatc 658 ||| ||||||||| |||| Sbjct: 938 gaccgatgttgaaaaatc 955 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 450 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgt 413 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 133 bits (67), Expect = 8e-28 Identities = 122/139 (87%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 579 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 580 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 639 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 640 cgactgatgttgaagaatc 658 |||| ||||||||| |||| Sbjct: 768 cgaccgatgttgaaaaatc 786 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 117 cgagcgaaatgggagcagcctaaac 141 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgt 413 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 125 bits (63), Expect = 2e-25 Identities = 122/141 (86%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 577 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggacccg 760 Query: 578 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 637 |||| ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||| Sbjct: 761 aacccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccga 820 Query: 638 accgactgatgttgaagaatc 658 |||||| ||||||||| |||| Sbjct: 821 accgaccgatgttgaaaaatc 841 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 117 cgagcgaaatgggagcagcctaaacc 142 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 508 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 2e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgt 413 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 61 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 120 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 121 cgaaatgggagcagcctaaacc 142 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 75.8 bits (38), Expect = 2e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 450 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 506 |||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggcattggttaa 650 Score = 61.9 bits (31), Expect = 2e-06 Identities = 74/88 (84%), Gaps = 4/88 (4%) Strand = Plus / Plus Query: 532 gcgaaagcgagtcttaatagggcg----attgtcactgcttatggacccgaacctgggtg 587 |||||||||||||| || |||||| |||||||| ||| |||||||||||| |||| Sbjct: 673 gcgaaagcgagtctgaaaagggcgtttatttgtcacttcttctggacccgaacccaggtg 732 Query: 588 atctatccatgaccaggatgaagcttgg 615 ||||| |||||||||| |||||||||| Sbjct: 733 atctaaccatgaccagattgaagcttgg 760
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 322 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 380 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 381 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 438 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 616 Query: 499 tt 500 || Sbjct: 617 tt 618 Score = 107 bits (54), Expect = 5e-20 Identities = 111/129 (86%), Gaps = 2/129 (1%) Strand = Plus / Plus Query: 532 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtgat 589 |||||||||||||| ||||||||| || |||| | | | |||||||||||| ||||||| Sbjct: 648 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaacccgggtgat 707 Query: 590 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 649 ||| ||||||||||||||||||||| | | |||||| ||||||||||||||| ||||| Sbjct: 708 ctaatcatgaccaggatgaagcttgggtaacactaagtggaggtccgaaccgaccgatgt 767 Query: 650 tgaagaatc 658 |||| |||| Sbjct: 768 tgaaaaatc 776 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 61 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 120 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 121 cgaa 124 |||| Sbjct: 219 cgaa 222
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgt 413 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgt 413 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 125 bits (63), Expect = 2e-25 Identities = 122/141 (86%), Gaps = 3/141 (2%) Strand = Plus / Minus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 577 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 151740 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 151681 Query: 578 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 637 |||| ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||| Sbjct: 151680 aacccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccga 151621 Query: 638 accgactgatgttgaagaatc 658 |||||| ||||||||| |||| Sbjct: 151620 accgaccgatgttgaaaaatc 151600 Score = 125 bits (63), Expect = 2e-25 Identities = 122/141 (86%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 577 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 42463 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 42522 Query: 578 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 637 |||| ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||| Sbjct: 42523 aacccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccga 42582 Query: 638 accgactgatgttgaagaatc 658 |||||| ||||||||| |||| Sbjct: 42583 accgaccgatgttgaaaaatc 42603 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 117 cgagcgaaatgggagcagcctaaacc 142 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 117 cgagcgaaatgggagcagcctaaacc 142 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 508 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 151749 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 508 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 42454
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 322 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 380 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 381 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 438 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 439 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 499 tt 500 || Sbjct: 636 tt 637 Score = 107 bits (54), Expect = 5e-20 Identities = 111/129 (86%), Gaps = 2/129 (1%) Strand = Plus / Plus Query: 532 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtgat 589 |||||||||||||| ||||||||| || |||| | | | |||||||||||| ||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaacccgggtgat 726 Query: 590 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 649 ||| ||||||||||||||||||||| | | |||||| ||||||||||||||| ||||| Sbjct: 727 ctaatcatgaccaggatgaagcttgggtaacactaagtggaggtccgaaccgaccgatgt 786 Query: 650 tgaagaatc 658 |||| |||| Sbjct: 787 tgaaaaatc 795 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 61 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 120 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 121 cgaa 124 |||| Sbjct: 238 cgaa 241
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgt 413 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 125 bits (63), Expect = 2e-25 Identities = 122/141 (86%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 577 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggacccg 760 Query: 578 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 637 |||| ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||| Sbjct: 761 aacccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccga 820 Query: 638 accgactgatgttgaagaatc 658 |||||| ||||||||| |||| Sbjct: 821 accgaccgatgttgaaaaatc 841 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 117 cgagcgaaatgggagcagcctaaacc 142 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 508 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgt 413 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 133 bits (67), Expect = 8e-28 Identities = 122/139 (87%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 579 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 580 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 639 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 640 cgactgatgttgaagaatc 658 |||| ||||||||| |||| Sbjct: 768 cgaccgatgttgaaaaatc 786 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 117 cgagcgaaatgggagcagcctaaac 141 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 499 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgt 413 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 125 bits (63), Expect = 2e-25 Identities = 122/141 (86%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 577 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 635 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 694 Query: 578 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 637 |||| ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||| Sbjct: 695 aacccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccga 754 Query: 638 accgactgatgttgaagaatc 658 |||||| ||||||||| |||| Sbjct: 755 accgaccgatgttgaaaaatc 775 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 117 cgagcgaaatgggagcagcctaaacc 142 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 508 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 626
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgt 413 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 117 cgagcgaaatgggagcagcctaaacc 142 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 508 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 711 Score = 83.8 bits (42), Expect = 7e-13 Identities = 84/96 (87%), Gaps = 4/96 (4%) Strand = Plus / Plus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 577 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 720 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 779 Query: 578 aacctgggtgatctatccatgaccaggatgaagctt 613 |||| ||||||||||| |||| || ||||||||||| Sbjct: 780 aacccgggtgatctattcatggcc-ggatgaagctt 814
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 196 bits (99), Expect = 6e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 265 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 324 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 325 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 384 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 385 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 444 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 445 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 493 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226 Score = 99.6 bits (50), Expect = 1e-17 Identities = 107/126 (84%) Strand = Plus / Plus Query: 534 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 593 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 594 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 653 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 654 gaatca 659 ||||| Sbjct: 382 aaatca 387
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 3e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 382 ccagtgggtagtgaaatagaacgtgaaacc 411 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 117 cgagcgaaatgggagcagcctaaacc 142 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/140 (84%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 578 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 579 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 638 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 681 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 740 Query: 639 ccgactgatgttgaagaatc 658 ||||| ||||||||| |||| Sbjct: 741 ccgaccgatgttgaaaaatc 760 Score = 71.9 bits (36), Expect = 3e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 450 ctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 3e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 370 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 429 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 430 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 479 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 3e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 382 ccagtgggtagtgaaatagaacgtgaaacc 411 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 117 cgagcgaaatgggagcagcctaaacc 142 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/140 (84%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 578 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 579 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 638 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 25490 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 25549 Query: 639 ccgactgatgttgaagaatc 658 ||||| ||||||||| |||| Sbjct: 25550 ccgaccgatgttgaaaaatc 25569 Score = 71.9 bits (36), Expect = 3e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 450 ctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 1e-45 Identities = 136/149 (91%) Strand = Plus / Plus Query: 265 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 324 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 325 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 384 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 385 gtgggtagtgaaatagaacgtgaaaccgt 413 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 109 bits (55), Expect = 1e-20 Identities = 118/139 (84%) Strand = Plus / Plus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 580 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 581 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 640 | |||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 641 gactgatgttgaagaatca 659 ||||||||||||| ||||| Sbjct: 369 gactgatgttgaaaaatca 387 Score = 60.0 bits (30), Expect = 1e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 458 gtgcctgttgaagaatgagccggcgactcatagg 491 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 1e-45 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 380 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 381 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 440 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 441 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 485 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 48 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 107 ||||| || |||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 146 caacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcgattcccg 205 Query: 108 tagtagcggcgagcgaaatgggagcagcctaaaccg 143 ||||||||||||||||| |||| |||||||||||| Sbjct: 206 gagtagcggcgagcgaaaagggaacagcctaaaccg 241 Score = 65.9 bits (33), Expect = 2e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 567 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 626 ||||||||||||||| |||||||||| | | ||||||||||| |||| | | || || Sbjct: 804 ttatggacccgaacccgggtgatctaatcctttccaggatgaagtttgggtcacaccaaa 863 Query: 627 cagaggtccgaaccgactgatgttgaagaatca 659 ||||||||||||||||||||||||| ||||| Sbjct: 864 tggaggtccgaaccgactgatgttgaaaaatca 896
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgt 413 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 133 bits (67), Expect = 8e-28 Identities = 123/141 (87%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 577 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 578 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 637 |||| ||||||||||| ||||||||||||||||||||| | | || ||| ||||||||| Sbjct: 704 aacccgggtgatctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccga 763 Query: 638 accgactgatgttgaagaatc 658 |||||| ||||||||| |||| Sbjct: 764 accgaccgatgttgaaaaatc 784 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 117 cgagcgaaatgggagcagcctaaacc 142 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 508 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 190 bits (96), Expect = 4e-45 Identities = 213/248 (85%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 441 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 442 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 500 ||| | || ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaa 799 Query: 501 ggttaagg 508 |||||||| Sbjct: 800 ggttaagg 807 Score = 117 bits (59), Expect = 5e-23 Identities = 122/143 (85%), Gaps = 5/143 (3%) Strand = Plus / Plus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 575 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 576 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 635 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 876 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 935 Query: 636 gaaccgactgatgttgaagaatc 658 |||||||| ||||||||| |||| Sbjct: 936 gaaccgaccgatgttgaaaaatc 958 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 61 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 120 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 158 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 217 Query: 121 cgaaatgggagcagcctaaacc 142 |||| |||| ||||||||||| Sbjct: 218 cgaaccgggatcagcctaaacc 239
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgt 413 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 129 bits (65), Expect = 1e-26 Identities = 119/136 (87%), Gaps = 2/136 (1%) Strand = Plus / Plus Query: 525 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 582 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 583 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 642 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 643 ctgatgttgaagaatc 658 | ||||||||| |||| Sbjct: 776 ccgatgttgaaaaatc 791 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 117 cgagcgaaatgggagcagcctaaacc 142 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 509 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 188 bits (95), Expect = 2e-44 Identities = 329/400 (82%), Gaps = 9/400 (2%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 2137 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 2196 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||| ||||| |||||||||| ||| ||||||| || ||||||||||||||||| Sbjct: 2197 taaatattcctgaatgaccgatagtgaaacagtaccgcgatttaaaggtgaaaagaaccc 2256 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 441 | | ||| ||||||||||||| |||||||| | |||| |||||||||||||| | Sbjct: 2257 cgggaggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggacga 2313 Query: 442 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 501 | | ||||||| ||||| ||||||||||||||||||||||| || |||||||| | Sbjct: 2314 cttaacgtctgacctcgtgcatgttgaagaatgagccggcgacttgtatgcagtggc-ag 2372 Query: 502 gttaagg-gaacggaacccaccggagccgtagcgaaagcgagtcttaat-agggcgattg 559 ||||||| | | ||| ||||||||| ||| ||||||||| ||| || || ||| | | Sbjct: 2373 gttaaggcgtaaagaa--taccggagccatagtgaaagcgag-cttgataagagcgttcg 2429 Query: 560 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 619 |||||| ||| |||||||||| || ||||||| |||| ||||| |||||||| | | | Sbjct: 2430 tcactgtttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggtaa 2489 Query: 620 aactaagcagaggtccgaaccgactgatgttgaagaatca 659 |||||| ||||||||||||||||||||||||| ||||| Sbjct: 2490 cactaagtggaggtccgaaccgactgatgttgaaaaatca 2529 Score = 155 bits (78), Expect = 2e-34 Identities = 90/94 (95%) Strand = Plus / Plus Query: 49 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 108 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| | Sbjct: 1911 aacctggcgaactgaaacatcttagtaaccagaggaaaataaagcaaaagcgattccctt 1970 Query: 109 agtagcggcgagcgaaatgggagcagcctaaacc 142 |||||||||||||||||||||| ||||||||||| Sbjct: 1971 agtagcggcgagcgaaatgggaacagcctaaacc 2004
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 437 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 437 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Minus Query: 48 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 107 |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 171352 caacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgattcccc 171293 Query: 108 tagtagcggcgagcgaaatgggagcagcctaaaccg 143 ||||||||||||||| | |||| |||||||||||| Sbjct: 171292 cagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 48 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 107 |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 121574 caacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgattcccc 121633 Query: 108 tagtagcggcgagcgaaatgggagcagcctaaaccg 143 ||||||||||||||| | |||| |||||||||||| Sbjct: 121634 cagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 450 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 508 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 170883 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 450 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 508 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 122043 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 580 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 170874 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 170815 Query: 581 ctgggtgatctatccatgaccaggatgaagcttgg 615 | |||||||||| |||||||||||||||||||||| Sbjct: 170814 ccgggtgatctaaccatgaccaggatgaagcttgg 170780 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 580 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 122052 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 122111 Query: 581 ctgggtgatctatccatgaccaggatgaagcttgg 615 | |||||||||| |||||||||||||||||||||| Sbjct: 122112 ccgggtgatctaaccatgaccaggatgaagcttgg 122146
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 437 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 48 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 107 |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 165 caacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgattcccc 224 Query: 108 tagtagcggcgagcgaaatgggagcagcctaaaccg 143 ||||||||||||||| | |||| |||||||||||| Sbjct: 225 cagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 450 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 508 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 634 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 521 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 580 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 643 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 702 Query: 581 ctgggtgatctatccatgaccaggatgaagcttgg 615 | |||||||||| |||||||||||||||||||||| Sbjct: 703 ccgggtgatctaaccatgaccaggatgaagcttgg 737
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 380 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 381 cccagtgggtagtgaaatagaacgtgaaaccgt 413 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 180 bits (91), Expect = 4e-42 Identities = 182/211 (86%), Gaps = 6/211 (2%) Strand = Plus / Plus Query: 450 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 509 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagga 688 Query: 510 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgct 567 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| | Sbjct: 689 ----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 568 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 627 |||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 745 tatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagt 804 Query: 628 agaggtccgaaccgactgatgttgaagaatc 658 || |||||||||||| ||||||||| |||| Sbjct: 805 ggaagtccgaaccgaccgatgttgaaaaatc 835 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 61 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 120 ||||||||||||||| || ||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 167 tgaaacatcttagtaaccggaggaaaagaaagcaaacgcgattcccttagtagcggcgag 226 Query: 121 cgaaatgggagcagcctaaaccg 143 |||||||||| |||||||||||| Sbjct: 227 cgaaatgggaacagcctaaaccg 249
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 182 bits (92), Expect = 1e-42 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 380 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 381 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 437 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 438 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 491 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 109 bits (55), Expect = 1e-20 Identities = 112/130 (86%), Gaps = 2/130 (1%) Strand = Plus / Plus Query: 531 agcgaaagcgagtcttaatagggcgat--tgtcactgcttatggacccgaacctgggtga 588 ||||||||||||||| ||||||||| | ||||| | ||||||||||||||||||| ||| Sbjct: 643 agcgaaagcgagtctgaatagggcgctaatgtcatttcttatggacccgaacctggatga 702 Query: 589 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 648 |||| ||||| |||||||||||||||| | | || || ||||||||||||||| |||| Sbjct: 703 tctaaccatggccaggatgaagcttgggtaacaccaattggaggtccgaaccgaccgatg 762 Query: 649 ttgaagaatc 658 ||||| |||| Sbjct: 763 ttgaaaaatc 772 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 55 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 114 ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 155 gcgaattgaaacatcttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagc 214 Query: 115 ggcgagcgaaatgggagcagcctaaac 141 |||||||| ||||||| |||||||||| Sbjct: 215 ggcgagcggaatgggaacagcctaaac 241
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 1e-42 Identities = 137/152 (90%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgt 413 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 125 bits (63), Expect = 2e-25 Identities = 120/139 (86%) Strand = Plus / Plus Query: 520 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 579 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 580 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 639 || |||||||||| |||||||||||||||||||| | ||| ||| ||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaac 741 Query: 640 cgactgatgttgaagaatc 658 |||| ||||||||| |||| Sbjct: 742 cgaccgatgttgaaaaatc 760 Score = 113 bits (57), Expect = 7e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 |||||| |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| Sbjct: 153 acaacccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattccc 212 Query: 107 gtagtagcggcgagcgaaatgggagcagcctaaaccg 143 |||||| ||||||||||| |||| ||| |||||||| Sbjct: 213 ttagtagtggcgagcgaaaagggatcagtctaaaccg 249 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 449 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 508 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 2e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 382 ccagtgggtagtgaaatagaacgtgaaacc 411 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 105 bits (53), Expect = 2e-19 Identities = 112/131 (85%), Gaps = 3/131 (2%) Strand = Plus / Plus Query: 531 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaacctgggtg 587 ||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggacccgaacccgggtg 718 Query: 588 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 647 |||||| |||||||||| |||||||| | | | |||| |||| |||||||||| ||| Sbjct: 719 atctattcatgaccaggttgaagcttttgtaacaataagtggaggaccgaaccgaccgat 778 Query: 648 gttgaagaatc 658 |||||| |||| Sbjct: 779 gttgaaaaatc 789 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 450 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 508 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 117 cgagcgaaatgggagcagcctaaacc 142 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 2e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 382 ccagtgggtagtgaaatagaacgtgaaacc 411 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 117 cgagcgaaatgggagcagcctaaacc 142 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 572 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 631 |||||||||| |||||||||| |||||||||||||||||||||| | | || | | || Sbjct: 547 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaataccacgtgaag 606 Query: 632 gtccgaaccgactgatgttgaa 653 ||||||||| |||||||||||| Sbjct: 607 gtccgaacccactgatgttgaa 628 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 450 ctgaccgcgtgcctgttgaagaatgagccggcgact 485 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 2e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 382 ccagtgggtagtgaaatagaacgtgaaacc 411 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 105 bits (53), Expect = 2e-19 Identities = 112/131 (85%), Gaps = 3/131 (2%) Strand = Plus / Plus Query: 531 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaacctgggtg 587 ||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggacccgaacccgggtg 718 Query: 588 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 647 |||||| |||||||||| |||||||| | | | |||| |||| |||||||||| ||| Sbjct: 719 atctattcatgaccaggttgaagcttttgtaacaataagtggaggaccgaaccgaccgat 778 Query: 648 gttgaagaatc 658 |||||| |||| Sbjct: 779 gttgaaaaatc 789 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 450 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 508 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 57 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 116 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 117 cgagcgaaatgggagcagcctaaacc 142 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 178 bits (90), Expect = 2e-41 Identities = 107/110 (97%), Gaps = 2/110 (1%) Strand = Plus / Plus Query: 7 accttttaaactgcctgctgaatcc-tgagcaggcaagagtacaacctggcgaactgaaa 65 |||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||| Sbjct: 75891 accttttaaactgcctgcggaatccatgagcaggcaagag-acaacctggcgaactgaaa 75949 Query: 66 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 115 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75950 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 336 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 382 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 336 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 382 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 ggcgaactgaaacatcttag 73 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 178 bits (90), Expect = 2e-41 Identities = 210/246 (85%), Gaps = 8/246 (3%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||| |||||||||| |||||||||||||| ||| |||||||||| | ||||| Sbjct: 498 cccgagtagctaggggcacgtgaaatcccgtgtgaatgagcgaggaccacctcgtaaggc 557 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 ||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 558 taaatactcctaggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 617 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-ga 440 | ||| ||||||| ||||| |||||||| | |||| ||||||||||||||| || Sbjct: 618 ctgtaggggagtgaaacagaacatgaaaccg---taagctgtcaagcagtgggagggcga 674 Query: 441 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 500 || | | |||||||||||||||||||||||||||||||||||| ||||| |||||| | Sbjct: 675 aa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcgt 730 Query: 501 ggttaa 506 |||||| Sbjct: 731 ggttaa 736 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%) Strand = Plus / Plus Query: 558 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 617 ||||||| ||||| ||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 786 tgtcacttcttatccacccgaacccgggtgatctaaccatggccaggatgaagcttgggt 845 Query: 618 gaaactaagcagaggtccgaaccgactgatgttgaagaatc 658 |||| ||| ||||||||||||||| ||||||||| |||| Sbjct: 846 aaaaccaagtggaggtccgaaccgaccgatgttgaaaaatc 886 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 62 gaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagc 121 |||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 280 gaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccttagtagcggcgagc 339 Query: 122 gaaatgggagcagcctaaacc 142 ||||| | ||||||||||| Sbjct: 340 gaaatcccaacagcctaaacc 360
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 265 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 324 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 325 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 384 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 385 gtgggtagtgaaatagaacgtgaaaccgt 413 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 119 bits (60), Expect = 1e-23 Identities = 111/128 (86%) Strand = Plus / Plus Query: 531 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 590 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 591 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 650 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 651 gaagaatc 658 ||| |||| Sbjct: 382 gaaaaatc 389 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 449 tctgaccgcgtgcctgttgaagaatgagccggcga 483 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 6e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 382 ccagt-gggtagtgaaatagaacgtgaaaccgt 413 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 137 bits (69), Expect = 5e-29 Identities = 90/97 (92%) Strand = Plus / Plus Query: 47 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 106 |||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 153 acaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattccc 212 Query: 107 gtagtagcggcgagcgaaatgggagcagcctaaaccg 143 |||||||||||||||||| ||||| |||||||||||| Sbjct: 213 gtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 133 bits (67), Expect = 8e-28 Identities = 173/208 (83%), Gaps = 4/208 (1%) Strand = Plus / Plus Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 510 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 511 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 570 | | || |||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 aaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 571 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 630 ||||||||||| |||||||||| |||||||||||||||||||| | | |||| || || Sbjct: 830 ggacccgaacccgggtgatctaaccatgaccaggatgaagcttcggtaaaacggagtgga 889 Query: 631 ggtccgaaccgactgatgttgaagaatc 658 |||||||||||| ||||||||| |||| Sbjct: 890 agtccgaaccgaccgatgttgaaaaatc 917
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtg 414 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 137 bits (69), Expect = 5e-29 Identities = 120/137 (87%) Strand = Plus / Plus Query: 523 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 582 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 583 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 642 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 643 ctgatgttgaagaatca 659 ||||||||||| ||||| Sbjct: 592 ctgatgttgaaaaatca 608 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 55 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 114 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 115 ggcgagcgaaatgggagcagcctaaacc 142 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 491 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtg 414 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 137 bits (69), Expect = 5e-29 Identities = 120/137 (87%) Strand = Plus / Plus Query: 523 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 582 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 583 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 642 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 643 ctgatgttgaagaatca 659 ||||||||||| ||||| Sbjct: 592 ctgatgttgaaaaatca 608 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 55 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 114 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 115 ggcgagcgaaatgggagcagcctaaacc 142 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 491 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtg 414 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 141 bits (71), Expect = 3e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 523 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 582 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 583 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 642 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 643 ctgatgttgaa 653 |||| |||||| Sbjct: 605 ctgacgttgaa 615 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 58 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 117 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 118 gagcgaaatgggagcagcctaaacc 142 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 3e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtg 414 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 141 bits (71), Expect = 3e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 523 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 582 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 583 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 642 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 643 ctgatgttgaa 653 |||| |||||| Sbjct: 605 ctgacgttgaa 615 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 55 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 114 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 115 ggcgagcgaaatgggagcagcctaaacc 142 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 3e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtg 414 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 137 bits (69), Expect = 5e-29 Identities = 120/137 (87%) Strand = Plus / Plus Query: 523 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 582 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 583 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 642 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 643 ctgatgttgaagaatca 659 ||||||||||| ||||| Sbjct: 592 ctgatgttgaaaaatca 608 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 55 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 114 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 115 ggcgagcgaaatgggagcagcctaaacc 142 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 491 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 262 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 321 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 322 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 381 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 382 ccagtgggtagtgaaatagaacgtgaaaccgtg 414 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 141 bits (71), Expect = 3e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 523 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 582 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 583 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 642 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 643 ctgatgttgaa 653 |||| |||||| Sbjct: 605 ctgacgttgaa 615 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 55 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 114 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 115 ggcgagcgaaatgggagcagcctaaacc 142 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 3e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 451 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 498 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,296,492 Number of Sequences: 3902068 Number of extensions: 4296492 Number of successful extensions: 128305 Number of sequences better than 10.0: 26564 Number of HSP's better than 10.0 without gapping: 26393 Number of HSP's successfully gapped in prelim test: 206 Number of HSP's that attempted gapping in prelim test: 80554 Number of HSP's gapped (non-prelim): 45621 length of query: 659 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 636 effective length of database: 17,143,297,704 effective search space: 10903137339744 effective search space used: 10903137339744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
