| Clone Name | basd25f19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470566.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2157 Score = 351 bits (177), Expect = 1e-93 Identities = 348/405 (85%) Strand = Plus / Plus Query: 82 tggccccggacgcaaatcttggtcgccgccaccaccgacgccactgaccttactgccctc 141 ||||||| || ||||||||||||||| || ||||||| | | ||| |||||| |||| Sbjct: 67 tggccccagaagcaaatcttggtcgctgcagacaccgaccctaatgatgttactgtcctc 126 Query: 142 aacacgctcttcactagcttgaattctccggggcagctcaaaggctggcaagtgaatggt 201 || ||||||||||||||| ||||||||||||||||||||||||| ||||| | | |||| Sbjct: 127 aatacgctcttcactagcctgaattctccggggcagctcaaaggttggcaggcaagtggt 186 Query: 202 ggtgacccttgcggcgaatcatggcagggcatcacttgctcaggatcgtcggttacagca 261 || |||||||| ||| ||||||||||||| ||||| ||||||||||| || ||||| ||| Sbjct: 187 ggagacccttgtggccaatcatggcagggtatcacgtgctcaggatcatcagttactgca 246 Query: 262 atcaaattaccaagcttgggcctgtccgggaatttgggctacaatatgaataccatgagt 321 |||||||||||||||||||| || ||||| ||||||| |||||||||||||||||| || Sbjct: 247 atcaaattaccaagcttggggctctccggtaatttggcgtacaatatgaataccatgggt 306 Query: 322 tcattggtcgagcttgatatgagccagaacagccttggtggtggacaagcgatacaatat 381 |||||| | ||| | ||||||||||| |||| |||||||||||| ||| |||||| || Sbjct: 307 tcattgattgagatcgatatgagccaaaacaaccttggtggtggccaacagatacagtac 366 Query: 382 aatctccccacagctaagcttgagaggctcaatcttgcaggaaaccagtttggtggagag 441 ||||| ||||| ||||||||||||||||||||| |||||||||||||| |||| | Sbjct: 367 aatcttcccactaataagcttgagaggctcaatctcgcaggaaaccagttcactggaaat 426 Query: 442 ttgccctactcgattttctcgatgaataatcttaagtatttaaat 486 || ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 427 ttaccctactcgattttctcgatgtctaatcttaagtatttaaat 471
>dbj|AK100621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108F23, full insert sequence Length = 2637 Score = 351 bits (177), Expect = 1e-93 Identities = 348/405 (85%) Strand = Plus / Plus Query: 82 tggccccggacgcaaatcttggtcgccgccaccaccgacgccactgaccttactgccctc 141 ||||||| || ||||||||||||||| || ||||||| | | ||| |||||| |||| Sbjct: 299 tggccccagaagcaaatcttggtcgctgcagacaccgaccctaatgatgttactgtcctc 358 Query: 142 aacacgctcttcactagcttgaattctccggggcagctcaaaggctggcaagtgaatggt 201 || ||||||||||||||| ||||||||||||||||||||||||| ||||| | | |||| Sbjct: 359 aatacgctcttcactagcctgaattctccggggcagctcaaaggttggcaggcaagtggt 418 Query: 202 ggtgacccttgcggcgaatcatggcagggcatcacttgctcaggatcgtcggttacagca 261 || |||||||| ||| ||||||||||||| ||||| ||||||||||| || ||||| ||| Sbjct: 419 ggagacccttgtggccaatcatggcagggtatcacgtgctcaggatcatcagttactgca 478 Query: 262 atcaaattaccaagcttgggcctgtccgggaatttgggctacaatatgaataccatgagt 321 |||||||||||||||||||| || ||||| ||||||| |||||||||||||||||| || Sbjct: 479 atcaaattaccaagcttggggctctccggtaatttggcgtacaatatgaataccatgggt 538 Query: 322 tcattggtcgagcttgatatgagccagaacagccttggtggtggacaagcgatacaatat 381 |||||| | ||| | ||||||||||| |||| |||||||||||| ||| |||||| || Sbjct: 539 tcattgattgagatcgatatgagccaaaacaaccttggtggtggccaacagatacagtac 598 Query: 382 aatctccccacagctaagcttgagaggctcaatcttgcaggaaaccagtttggtggagag 441 ||||| ||||| ||||||||||||||||||||| |||||||||||||| |||| | Sbjct: 599 aatcttcccactaataagcttgagaggctcaatctcgcaggaaaccagttcactggaaat 658 Query: 442 ttgccctactcgattttctcgatgaataatcttaagtatttaaat 486 || ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 659 ttaccctactcgattttctcgatgtctaatcttaagtatttaaat 703
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 137 bits (69), Expect = 4e-29 Identities = 117/133 (87%) Strand = Plus / Plus Query: 131 ttactgccctcaacacgctcttcactagcttgaattctccggggcagctcaaaggctggc 190 |||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 4380244 ttactgtcctcaatacgctcttcactagcctgaattctccggggcagctcaaaggttggc 4380303 Query: 191 aagtgaatggtggtgacccttgcggcgaatcatggcagggcatcacttgctcaggatcgt 250 | | | |||||| |||||||| ||| ||||||||||||| ||||| ||||||||||| | Sbjct: 4380304 aggcaagtggtggagacccttgtggccaatcatggcagggtatcacgtgctcaggatcat 4380363 Query: 251 cggttacagcaat 263 | ||||| ||||| Sbjct: 4380364 cagttactgcaat 4380376 Score = 79.8 bits (40), Expect = 8e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 264 caaattaccaagcttgggcctgtccgggaatttgggctacaatatgaataccatgagttc 323 |||||||||||||||||| || ||||| ||||||| |||||||||||||||||| |||| Sbjct: 4380470 caaattaccaagcttggggctctccggtaatttggcgtacaatatgaataccatgggttc 4380529 Query: 324 attg 327 |||| Sbjct: 4380530 attg 4380533 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 411 caatcttgcaggaaaccagtttggtggagagttgccctactcgattttctcgatgaataa 470 |||||| |||||||||||||| |||| | || ||||||||||||||||||||| ||| Sbjct: 4380781 caatctcgcaggaaaccagttcactggaaatttaccctactcgattttctcgatgtctaa 4380840 Query: 471 tcttaagtattt 482 |||||||||||| Sbjct: 4380841 tcttaagtattt 4380852 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 337 gatatgagccagaacagccttggtggtggacaagcgatacaatataatctccccacagct 396 ||||||||||| |||| |||||||||||| ||| |||||| || ||||| ||||| | Sbjct: 4380625 gatatgagccaaaacaaccttggtggtggccaacagatacagtacaatcttcccactaat 4380684 Query: 397 aagcttgagaggct 410 |||||||||||||| Sbjct: 4380685 aagcttgagaggct 4380698 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggaggaggaggaggggcggcg 22 ||||||||||||||||||||| Sbjct: 26186027 ggaggaggaggaggggcggcg 26186047 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcggc 21 ||||||||||||||||||||| Sbjct: 24652164 gggaggaggaggaggggcggc 24652144 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcggcgga 24 ||||||||||||||| |||||||| Sbjct: 10702112 gggaggaggaggaggagcggcgga 10702089
>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G08, from Chromosome 3, complete sequence Length = 122052 Score = 137 bits (69), Expect = 4e-29 Identities = 117/133 (87%) Strand = Plus / Minus Query: 131 ttactgccctcaacacgctcttcactagcttgaattctccggggcagctcaaaggctggc 190 |||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 46253 ttactgtcctcaatacgctcttcactagcctgaattctccggggcagctcaaaggttggc 46194 Query: 191 aagtgaatggtggtgacccttgcggcgaatcatggcagggcatcacttgctcaggatcgt 250 | | | |||||| |||||||| ||| ||||||||||||| ||||| ||||||||||| | Sbjct: 46193 aggcaagtggtggagacccttgtggccaatcatggcagggtatcacgtgctcaggatcat 46134 Query: 251 cggttacagcaat 263 | ||||| ||||| Sbjct: 46133 cagttactgcaat 46121 Score = 79.8 bits (40), Expect = 8e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 264 caaattaccaagcttgggcctgtccgggaatttgggctacaatatgaataccatgagttc 323 |||||||||||||||||| || ||||| ||||||| |||||||||||||||||| |||| Sbjct: 46027 caaattaccaagcttggggctctccggtaatttggcgtacaatatgaataccatgggttc 45968 Query: 324 attg 327 |||| Sbjct: 45967 attg 45964 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 411 caatcttgcaggaaaccagtttggtggagagttgccctactcgattttctcgatgaataa 470 |||||| |||||||||||||| |||| | || ||||||||||||||||||||| ||| Sbjct: 45716 caatctcgcaggaaaccagttcactggaaatttaccctactcgattttctcgatgtctaa 45657 Query: 471 tcttaagtattt 482 |||||||||||| Sbjct: 45656 tcttaagtattt 45645 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 337 gatatgagccagaacagccttggtggtggacaagcgatacaatataatctccccacagct 396 ||||||||||| |||| |||||||||||| ||| |||||| || ||||| ||||| | Sbjct: 45872 gatatgagccaaaacaaccttggtggtggccaacagatacagtacaatcttcccactaat 45813 Query: 397 aagcttgagaggct 410 |||||||||||||| Sbjct: 45812 aagcttgagaggct 45799
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 137 bits (69), Expect = 4e-29 Identities = 117/133 (87%) Strand = Plus / Plus Query: 131 ttactgccctcaacacgctcttcactagcttgaattctccggggcagctcaaaggctggc 190 |||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 4380359 ttactgtcctcaatacgctcttcactagcctgaattctccggggcagctcaaaggttggc 4380418 Query: 191 aagtgaatggtggtgacccttgcggcgaatcatggcagggcatcacttgctcaggatcgt 250 | | | |||||| |||||||| ||| ||||||||||||| ||||| ||||||||||| | Sbjct: 4380419 aggcaagtggtggagacccttgtggccaatcatggcagggtatcacgtgctcaggatcat 4380478 Query: 251 cggttacagcaat 263 | ||||| ||||| Sbjct: 4380479 cagttactgcaat 4380491 Score = 79.8 bits (40), Expect = 8e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 264 caaattaccaagcttgggcctgtccgggaatttgggctacaatatgaataccatgagttc 323 |||||||||||||||||| || ||||| ||||||| |||||||||||||||||| |||| Sbjct: 4380585 caaattaccaagcttggggctctccggtaatttggcgtacaatatgaataccatgggttc 4380644 Query: 324 attg 327 |||| Sbjct: 4380645 attg 4380648 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 411 caatcttgcaggaaaccagtttggtggagagttgccctactcgattttctcgatgaataa 470 |||||| |||||||||||||| |||| | || ||||||||||||||||||||| ||| Sbjct: 4380896 caatctcgcaggaaaccagttcactggaaatttaccctactcgattttctcgatgtctaa 4380955 Query: 471 tcttaagtattt 482 |||||||||||| Sbjct: 4380956 tcttaagtattt 4380967 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 337 gatatgagccagaacagccttggtggtggacaagcgatacaatataatctccccacagct 396 ||||||||||| |||| |||||||||||| ||| |||||| || ||||| ||||| | Sbjct: 4380740 gatatgagccaaaacaaccttggtggtggccaacagatacagtacaatcttcccactaat 4380799 Query: 397 aagcttgagaggct 410 |||||||||||||| Sbjct: 4380800 aagcttgagaggct 4380813 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggaggaggaggaggggcggcg 22 ||||||||||||||||||||| Sbjct: 26277336 ggaggaggaggaggggcggcg 26277356 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcggc 21 ||||||||||||||||||||| Sbjct: 24569633 gggaggaggaggaggggcggc 24569613 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcggcgga 24 ||||||||||||||| |||||||| Sbjct: 10700213 gggaggaggaggaggagcggcgga 10700190
>ref|NM_196278.1| Oryza sativa (japonica cultivar-group) putative leucine-rich repeat transmembrane protein kinase 1 (OSJNBb0061I18.16), mRNA Length = 2211 Score = 125 bits (63), Expect = 1e-25 Identities = 183/223 (82%) Strand = Plus / Plus Query: 96 aatcttggtcgccgccaccaccgacgccactgaccttactgccctcaacacgctcttcac 155 ||||||||| || || ||||| ||||||| ||| |||||| |||||| |||| ||||| Sbjct: 66 aatcttggttgctgcgaccactgacgccaatgatgttactgtcctcaatgcgctattcac 125 Query: 156 tagcttgaattctccggggcagctcaaaggctggcaagtgaatggtggtgacccttgcgg 215 ||| | ||||| ||||||||||| || ||||| |||||||| |||||||| || || Sbjct: 126 cagcctcaattcgccggggcagctgcgcggttggcaggtgaatggcggtgacccatgtgg 185 Query: 216 cgaatcatggcagggcatcacttgctcaggatcgtcggttacagcaatcaaattaccaag 275 || ||||||||||||||||| ||||| ||||| || || |||||||| ||||| || || Sbjct: 186 cgcctcatggcagggcatcacctgctctggatcatcagtcacagcaattaaattgccgag 245 Query: 276 cttgggcctgtccgggaatttgggctacaatatgaataccatg 318 |||||| || || |||||| ||| |||||||||||| |||||| Sbjct: 246 cttggggctttcggggaatctggcctacaatatgaacaccatg 288 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 397 aagcttgagaggctcaatcttgcaggaaaccagtttggtgga 438 ||||||||||||||||||||||| || |||||||||| |||| Sbjct: 367 aagcttgagaggctcaatcttgctgggaaccagtttgctgga 408
>gb|AY224517.1| Oryza sativa (japonica cultivar-group) isolate 20144 putative leucine-rich repeat transmembrane protein kinase mRNA, complete cds Length = 2202 Score = 125 bits (63), Expect = 1e-25 Identities = 183/223 (82%) Strand = Plus / Plus Query: 96 aatcttggtcgccgccaccaccgacgccactgaccttactgccctcaacacgctcttcac 155 ||||||||| || || ||||| ||||||| ||| |||||| |||||| |||| ||||| Sbjct: 108 aatcttggttgctgcgaccactgacgccaatgatgttactgtcctcaatgcgctattcac 167 Query: 156 tagcttgaattctccggggcagctcaaaggctggcaagtgaatggtggtgacccttgcgg 215 ||| | ||||| ||||||||||| || ||||| |||||||| |||||||| || || Sbjct: 168 cagcctcaattcgccggggcagctgcgcggttggcaggtgaatggcggtgacccatgtgg 227 Query: 216 cgaatcatggcagggcatcacttgctcaggatcgtcggttacagcaatcaaattaccaag 275 || ||||||||||||||||| ||||| ||||| || || |||||||| ||||| || || Sbjct: 228 cgcctcatggcagggcatcacctgctctggatcatcagtcacagcaattaaattgccgag 287 Query: 276 cttgggcctgtccgggaatttgggctacaatatgaataccatg 318 |||||| || || |||||| ||| |||||||||||| |||||| Sbjct: 288 cttggggctttcggggaatctggcctacaatatgaacaccatg 330 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 397 aagcttgagaggctcaatcttgcaggaaaccagtttggtgga 438 ||||||||||||||||||||||| || |||||||||| |||| Sbjct: 409 aagcttgagaggctcaatcttgctgggaaccagtttgctgga 450
>dbj|AK111516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F24, full insert sequence Length = 2433 Score = 125 bits (63), Expect = 1e-25 Identities = 183/223 (82%) Strand = Plus / Plus Query: 96 aatcttggtcgccgccaccaccgacgccactgaccttactgccctcaacacgctcttcac 155 ||||||||| || || ||||| ||||||| ||| |||||| |||||| |||| ||||| Sbjct: 127 aatcttggttgctgcgaccactgacgccaatgatgttactgtcctcaatgcgctattcac 186 Query: 156 tagcttgaattctccggggcagctcaaaggctggcaagtgaatggtggtgacccttgcgg 215 ||| | ||||| ||||||||||| || ||||| |||||||| |||||||| || || Sbjct: 187 cagcctcaattcgccggggcagctgcgcggttggcaggtgaatggcggtgacccatgtgg 246 Query: 216 cgaatcatggcagggcatcacttgctcaggatcgtcggttacagcaatcaaattaccaag 275 || ||||||||||||||||| ||||| ||||| || || |||||||| ||||| || || Sbjct: 247 cgcctcatggcagggcatcacctgctctggatcatcagtcacagcaattaaattgccgag 306 Query: 276 cttgggcctgtccgggaatttgggctacaatatgaataccatg 318 |||||| || || |||||| ||| |||||||||||| |||||| Sbjct: 307 cttggggctttcggggaatctggcctacaatatgaacaccatg 349 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 397 aagcttgagaggctcaatcttgcaggaaaccagtttggtgga 438 ||||||||||||||||||||||| || |||||||||| |||| Sbjct: 428 aagcttgagaggctcaatcttgctgggaaccagtttgctgga 469
>gb|AF023165.1|AF023165 Zea mays leucine-rich repeat transmembrane protein kinase 2 (ltk2) mRNA, complete cds Length = 2388 Score = 111 bits (56), Expect = 2e-21 Identities = 275/348 (79%) Strand = Plus / Plus Query: 138 cctcaacacgctcttcactagcttgaattctccggggcagctcaaaggctggcaagtgaa 197 |||||| ||||||||||| || |||||||||| |||||||||| || |||| | ||| Sbjct: 237 cctcaatacgctcttcaccagtctgaattctcctgggcagctcagagcttggcgggcgaa 296 Query: 198 tggtggtgacccttgcggcgaatcatggcagggcatcacttgctcaggatcgtcggttac 257 ||| ||||| ||||| ||| | |||||||||||||| || ||||||||||| ||| || Sbjct: 297 tggcggtgatccttgtggccagtcatggcagggcattacctgctcaggatcaggggtcac 356 Query: 258 agcaatcaaattaccaagcttgggcctgtccgggaatttgggctacaatatgaataccat 317 |||| |||||||| |||| || |||| ||| ||| |||||| ||||||| | | Sbjct: 357 taaaatcctattaccaaacttgtcactcaccggaaatctggcctacaacatgaataactt 416 Query: 318 gagttcattggtcgagcttgatatgagccagaacagccttggtggtggacaagcgataca 377 | ||||||| || |||||||| ||||||| || | ||||||||||||| ||||| Sbjct: 417 gggttcattagttgagcttgacttgagccaaaataaccttggtggtggaggccaaataca 476 Query: 378 atataatctccccacagctaagcttgagaggctcaatcttgcaggaaaccagtttggtgg 437 || ||||| |||| | |||||||||| ||||||||||||||||| || |||||||| Sbjct: 477 gtacaatcttcccaatgtgaagcttgagaaactcaatcttgcaggaaatcaatttggtgg 536 Query: 438 agagttgccctactcgattttctcgatgaataatcttaagtatttaaa 485 | | || |||||||| |||| ||||| |||||||||||||||||| Sbjct: 537 aaatttaccctactcaatttcgacgatgcctaatcttaagtatttaaa 584
>gb|AF023164.1|AF023164 Zea mays leucine-rich repeat transmembrane protein kinase 1 (ltk1) mRNA, partial cds Length = 2310 Score = 105 bits (53), Expect = 1e-19 Identities = 185/229 (80%) Strand = Plus / Plus Query: 138 cctcaacacgctcttcactagcttgaattctccggggcagctcaaaggctggcaagtgaa 197 |||||||||||||||||| || |||||||||| |||||||||| ||| ||||| | ||| Sbjct: 23 cctcaacacgctcttcaccagtctgaattctcctgggcagctcacaggttggcaggcgaa 82 Query: 198 tggtggtgacccttgcggcgaatcatggcagggcatcacttgctcaggatcgtcggttac 257 ||| ||||| ||||| ||| | |||||| ||||||| |||||||||||||| ||| || Sbjct: 83 tgggggtgatccttgtggccagtcatggaagggcattacttgctcaggatcaggggtcac 142 Query: 258 agcaatcaaattaccaagcttgggcctgtccgggaatttgggctacaatatgaataccat 317 |||| ||||||| | |||| || | || ||||||| |||||| ||||||| | | Sbjct: 143 taaaatccaattacctaacttgtcactcactggaaatttggcctacaacatgaataactt 202 Query: 318 gagttcattggtcgagcttgatatgagccagaacagccttggtggtgga 366 | ||||||| || |||||||| |||||||| || | |||||| |||||| Sbjct: 203 gggttcattagttgagcttgacatgagccaaaataaccttggcggtgga 251 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 397 aagcttgagaggctcaatcttgcaggaaaccagtttggtggagagttgccctactcgatt 456 |||||||||| ||||||||||||||||| || ||||||||| | || |||||||| ||| Sbjct: 282 aagcttgagaaactcaatcttgcaggaaatcaatttggtggaaatttaccctactcaatt 341 Query: 457 ttctcgatgaataatcttaagtatttaaa 485 | ||||| |||||||||||||||||| Sbjct: 342 tcgacgatgcctaatcttaagtatttaaa 370
>gb|AY109511.1| Zea mays CL1762_1 mRNA sequence Length = 2393 Score = 77.8 bits (39), Expect = 3e-11 Identities = 228/291 (78%) Strand = Plus / Plus Query: 195 gaatggtggtgacccttgcggcgaatcatggcagggcatcacttgctcaggatcgtcggt 254 |||||| ||||| ||||| ||| | |||||||||||||| || ||||||||||| ||| Sbjct: 299 gaatggcggtgatccttgtggccagtcatggcagggcattacctgctcaggatcaggggt 358 Query: 255 tacagcaatcaaattaccaagcttgggcctgtccgggaatttgggctacaatatgaatac 314 || |||| |||||||| |||| || |||| ||| ||| |||||| ||||||| Sbjct: 359 cactaaaatcctattaccaaacttgtcactcgccggaaatctggcctacaacatgaataa 418 Query: 315 catgagttcattggtcgagcttgatatgagccagaacagccttggtggtggacaagcgat 374 | || ||||||| || |||||||| ||||||| || | |||||| |||||| || Sbjct: 419 cttgggttcattagttgagcttgacttgagccaaaataaccttggcggtggaggccaaat 478 Query: 375 acaatataatctccccacagctaagcttgagaggctcaatcttgcaggaaaccagtttgg 434 ||| || ||||| |||| | |||||||||| ||||||||||||||||| || ||||| Sbjct: 479 acagtacaatcttcccaatgtgaagcttgagaaactcaatcttgcaggaaatcaatttgg 538 Query: 435 tggagagttgccctactcgattttctcgatgaataatcttaagtatttaaa 485 |||| | || |||||||| |||| ||||| |||||||||||||||||| Sbjct: 539 tggaaatttaccctactcaatttcgacgatgcctaatcttaagtatttaaa 589
>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBb0061I18, complete sequence Length = 143163 Score = 73.8 bits (37), Expect = 5e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 131 ttactgccctcaacacgctcttcactagcttgaattctccggggcagctcaaaggctggc 190 |||||| |||||| |||| ||||| ||| | ||||| ||||||||||| || |||| Sbjct: 93512 ttactgtcctcaatgcgctattcaccagcctcaattcgccggggcagctgcgcggttggc 93571 Query: 191 aagtgaatggtggtgacccttgcggcgaatcatggcagggcatcacttgctcaggatcgt 250 | |||||||| |||||||| || |||| ||||||||||||||||| ||||| ||||| | Sbjct: 93572 aggtgaatggcggtgacccatgtggcgcctcatggcagggcatcacctgctctggatcat 93631 Query: 251 cggttacagcaat 263 | || |||||||| Sbjct: 93632 cagtcacagcaat 93644 Score = 44.1 bits (22), Expect = 0.43 Identities = 46/54 (85%) Strand = Plus / Plus Query: 265 aaattaccaagcttgggcctgtccgggaatttgggctacaatatgaataccatg 318 ||||| || |||||||| || || |||||| ||| |||||||||||| |||||| Sbjct: 93738 aaattgccgagcttggggctttcggggaatctggcctacaatatgaacaccatg 93791
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 73.8 bits (37), Expect = 5e-10 Identities = 109/133 (81%) Strand = Plus / Minus Query: 131 ttactgccctcaacacgctcttcactagcttgaattctccggggcagctcaaaggctggc 190 |||||| |||||| |||| ||||| ||| | ||||| ||||||||||| || |||| Sbjct: 12410663 ttactgtcctcaatgcgctattcaccagcctcaattcgccggggcagctgcgcggttggc 12410604 Query: 191 aagtgaatggtggtgacccttgcggcgaatcatggcagggcatcacttgctcaggatcgt 250 | |||||||| |||||||| || |||| ||||||||||||||||| ||||| ||||| | Sbjct: 12410603 aggtgaatggcggtgacccatgtggcgcctcatggcagggcatcacctgctctggatcat 12410544 Query: 251 cggttacagcaat 263 | || |||||||| Sbjct: 12410543 cagtcacagcaat 12410531 Score = 44.1 bits (22), Expect = 0.43 Identities = 46/54 (85%) Strand = Plus / Minus Query: 265 aaattaccaagcttgggcctgtccgggaatttgggctacaatatgaataccatg 318 ||||| || |||||||| || || |||||| ||| |||||||||||| |||||| Sbjct: 12410437 aaattgccgagcttggggctttcggggaatctggcctacaatatgaacaccatg 12410384
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 73.8 bits (37), Expect = 5e-10 Identities = 109/133 (81%) Strand = Plus / Minus Query: 131 ttactgccctcaacacgctcttcactagcttgaattctccggggcagctcaaaggctggc 190 |||||| |||||| |||| ||||| ||| | ||||| ||||||||||| || |||| Sbjct: 12418003 ttactgtcctcaatgcgctattcaccagcctcaattcgccggggcagctgcgcggttggc 12417944 Query: 191 aagtgaatggtggtgacccttgcggcgaatcatggcagggcatcacttgctcaggatcgt 250 | |||||||| |||||||| || |||| ||||||||||||||||| ||||| ||||| | Sbjct: 12417943 aggtgaatggcggtgacccatgtggcgcctcatggcagggcatcacctgctctggatcat 12417884 Query: 251 cggttacagcaat 263 | || |||||||| Sbjct: 12417883 cagtcacagcaat 12417871 Score = 44.1 bits (22), Expect = 0.43 Identities = 46/54 (85%) Strand = Plus / Minus Query: 265 aaattaccaagcttgggcctgtccgggaatttgggctacaatatgaataccatg 318 ||||| || |||||||| || || |||||| ||| |||||||||||| |||||| Sbjct: 12417777 aaattgccgagcttggggctttcggggaatctggcctacaatatgaacaccatg 12417724
>gb|AF023166.1|AF023166 Zea mays leucine-rich repeat transmembrane protein kinase 3 (ltk3) mRNA, partial cds Length = 1077 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 397 aagcttgagaggctcaatcttgcaggaaaccagtttggtggagagttgccctactcgatt 456 |||||||||| ||||||||||||||||| || ||||||||| | || |||||||| ||| Sbjct: 219 aagcttgagaaactcaatcttgcaggaaatcaatttggtggaaatttaccctactcaatt 278 Query: 457 ttctcgatgaataatcttaagtatttaaa 485 | ||||| |||||||||||||||||| Sbjct: 279 tcgacgatgcctaatcttaagtatttaaa 307 Score = 63.9 bits (32), Expect = 5e-07 Identities = 137/172 (79%) Strand = Plus / Plus Query: 195 gaatggtggtgacccttgcggcgaatcatggcagggcatcacttgctcaggatcgtcggt 254 |||||| ||||| ||||| ||| | |||||| ||||||| |||||||||||||| ||| Sbjct: 17 gaatgggggtgatccttgtggccagtcatggaagggcattacttgctcaggatcaggggt 76 Query: 255 tacagcaatcaaattaccaagcttgggcctgtccgggaatttgggctacaatatgaatac 314 || |||| ||||||||| |||| || | || ||||||| |||||| ||||||| Sbjct: 77 cactaaaatccaattaccaaacttgtcactcgctggaaatttggcctacaacatgaataa 136 Query: 315 catgagttcattggtcgagcttgatatgagccagaacagccttggtggtgga 366 | || ||||||| || |||||||| |||||||| || | |||||| |||||| Sbjct: 137 cttgggttcattagttgagcttgacatgagccaaaataaccttggcggtgga 188
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2 ggaggaggaggaggggcggcgga 24 ||||||||||||||||||||||| Sbjct: 8088183 ggaggaggaggaggggcggcgga 8088205 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ggaggaggaggaggggcggc 21 |||||||||||||||||||| Sbjct: 24614518 ggaggaggaggaggggcggc 24614499
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2 ggaggaggaggaggggcggcgga 24 ||||||||||||||||||||||| Sbjct: 76376 ggaggaggaggaggggcggcgga 76398
>emb|AL592188.60| Human DNA sequence from clone RP11-337M7 on chromosome 22, complete sequence Length = 161802 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcggcgg 23 ||||||||||||||||||||||| Sbjct: 157901 gggaggaggaggaggggcggcgg 157879 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcggcgg 23 ||||||||||||||||||||||| Sbjct: 113929 gggaggaggaggaggggcggcgg 113907
>gb|U13369.1|HSU13369 Human ribosomal DNA complete repeating unit Length = 42999 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcggcgg 23 ||||||||||||||||||||||| Sbjct: 8507 gggaggaggaggaggggcggcgg 8485
>gb|M30952.1|ORARGITX Orangutan 28S ribosomal RNA gene fragment Length = 2487 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcggcgg 23 ||||||||||||||||||||||| Sbjct: 226 gggaggaggaggaggggcggcgg 204
>gb|M11167.1|HUMRGM Human 28S ribosomal RNA gene Length = 5025 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcggcgg 23 ||||||||||||||||||||||| Sbjct: 573 gggaggaggaggaggggcggcgg 551
>gb|M30951.1|GORRGITX Gorilla 28S ribosomal RNA gene fragment Length = 2467 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcggcgg 23 ||||||||||||||||||||||| Sbjct: 227 gggaggaggaggaggggcggcgg 205
>gb|M30950.1|CHPRGITX Chimpanzee 28S ribosomal RNA gene fragment Length = 2512 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcggcgg 23 ||||||||||||||||||||||| Sbjct: 228 gggaggaggaggaggggcggcgg 206
>gb|AY332761.1| Canis familiaris polycystic kidney disease 1 gene, promoter region and partial cds Length = 1345 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 ggaggaggaggaggggcggcgg 23 |||||||||||||||||||||| Sbjct: 1072 ggaggaggaggaggggcggcgg 1093
>ref|NM_193373.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1374 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 ggaggaggaggaggggcggcgg 23 |||||||||||||||||||||| Sbjct: 1278 ggaggaggaggaggggcggcgg 1299
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 ggaggaggaggaggggcggcgg 23 |||||||||||||||||||||| Sbjct: 20458598 ggaggaggaggaggggcggcgg 20458619
>dbj|AP004614.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0042P21 Length = 141230 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 ggaggaggaggaggggcggcgg 23 |||||||||||||||||||||| Sbjct: 114713 ggaggaggaggaggggcggcgg 114734
>gb|AY785360.1| Anopheles gambiae male-specific transcription factor FRU-MB (fru) mRNA, complete cds Length = 2384 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 cgccgccaccaccgacgccac 125 ||||||||||||||||||||| Sbjct: 921 cgccgccaccaccgacgccac 901
>gb|AY785361.1| Anopheles gambiae male-specific transcription factor FRU-MA (fru) mRNA, complete cds Length = 2974 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 cgccgccaccaccgacgccac 125 ||||||||||||||||||||| Sbjct: 921 cgccgccaccaccgacgccac 901
>ref|XM_469221.1| Oryza sativa (japonica cultivar-group), mRNA Length = 915 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggaggaggaggaggggcggcg 22 ||||||||||||||||||||| Sbjct: 883 ggaggaggaggaggggcggcg 903
>gb|AC158791.4| Mus musculus chromosome 1, clone RP23-247C6, complete sequence Length = 218755 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 caatatgaataccatgagttc 323 ||||||||||||||||||||| Sbjct: 65285 caatatgaataccatgagttc 65265
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 129 ccttactgccctcaacacgctcttc 153 ||||||||||||||||| ||||||| Sbjct: 1035064 ccttactgccctcaacatgctcttc 1035088
>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcggc 21 ||||||||||||||||||||| Sbjct: 28350 gggaggaggaggaggggcggc 28330
>gb|AY725820.1| Anopheles gambiae fruitless female-specific zinc-finger C isoform mRNA, complete cds, alternatively spliced Length = 4043 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 cgccgccaccaccgacgccac 125 ||||||||||||||||||||| Sbjct: 2685 cgccgccaccaccgacgccac 2665
>ref|XM_570189.1| Cryptococcus neoformans var. neoformans JEC21 aldo-keto reductase (CND03740) partial mRNA Length = 1350 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 129 ccttactgccctcaacacgctcttc 153 ||||||||||||||||| ||||||| Sbjct: 856 ccttactgccctcaacatgctcttc 880
>ref|XM_547965.2| PREDICTED: Canis familiaris similar to CPG2 protein (LOC490843), mRNA Length = 2769 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 gggaggaggaggaggggcggc 21 ||||||||||||||||||||| Sbjct: 1076 gggaggaggaggaggggcggc 1096
>gb|AC109240.30| Mus musculus chromosome 1, clone RP23-445I23, complete sequence Length = 189545 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 caatatgaataccatgagttc 323 ||||||||||||||||||||| Sbjct: 72918 caatatgaataccatgagttc 72938
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136470 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcggc 21 ||||||||||||||||||||| Sbjct: 84210 gggaggaggaggaggggcggc 84190
>gb|AC116369.5| Oryza sativa chromosome 3 BAC OSJNBb0113I20 genomic sequence, complete sequence Length = 122939 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggaggaggaggaggggcggcg 22 ||||||||||||||||||||| Sbjct: 15486 ggaggaggaggaggggcggcg 15506
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gaggaggaggaggggcggcgg 23 ||||||||||||||||||||| Sbjct: 1774864 gaggaggaggaggggcggcgg 1774844 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ggaggaggaggggcggcgga 24 |||||||||||||||||||| Sbjct: 7292498 ggaggaggaggggcggcgga 7292479
>dbj|AP003742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_D07 Length = 131449 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 gaggaggaggaggggcggcgg 23 ||||||||||||||||||||| Sbjct: 27083 gaggaggaggaggggcggcgg 27063
>ref|XM_477178.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1326 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ggaggaggaggggcggcgga 24 |||||||||||||||||||| Sbjct: 88 ggaggaggaggggcggcgga 107
>gb|AY022479.1| Oryza sativa microsatellite MRG4804 containing (AGG)X8, closest to marker RZ318, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ggaggaggaggaggggcggc 21 |||||||||||||||||||| Sbjct: 111 ggaggaggaggaggggcggc 130
>gb|AC136378.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0047D03, complete sequence Length = 126165 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 gtcgccgccaccaccgacgc 122 |||||||||||||||||||| Sbjct: 66230 gtcgccgccaccaccgacgc 66249
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tggtcgccgccaccaccgac 120 |||||||||||||||||||| Sbjct: 1830291 tggtcgccgccaccaccgac 1830272
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 ggtcgccgccaccaccgacgccac 125 ||||||||||||||||| |||||| Sbjct: 2215159 ggtcgccgccaccaccgccgccac 2215182
>ref|XM_365691.1| Magnaporthe grisea 70-15 hypothetical protein (MG02393.4) partial mRNA Length = 864 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ggaggaggaggaggggcggc 21 |||||||||||||||||||| Sbjct: 128 ggaggaggaggaggggcggc 109
>gb|AC136787.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052B22, complete sequence Length = 156725 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 gtcgccgccaccaccgacgc 122 |||||||||||||||||||| Sbjct: 731 gtcgccgccaccaccgacgc 750
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ttggtcgccgccaccaccga 119 |||||||||||||||||||| Sbjct: 1226159 ttggtcgccgccaccaccga 1226140
>gb|AC104102.4| Mus musculus BAC clone RP24-377I13 from 15, complete sequence Length = 187284 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 ttaagtatttaaatattaac 492 |||||||||||||||||||| Sbjct: 51662 ttaagtatttaaatattaac 51643
>gb|AY838879.1| Borrelia hermsii plasmid lp28, partial sequence Length = 11667 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 caatcaaattaccaagcttg 279 |||||||||||||||||||| Sbjct: 2675 caatcaaattaccaagcttg 2656
>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G21, from chromosome 3, complete sequence Length = 187621 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcggcgga 24 ||||||||||||||| |||||||| Sbjct: 119026 gggaggaggaggaggagcggcgga 119003
>emb|CR788312.9| Zebrafish DNA sequence from clone DKEY-192D9, complete sequence Length = 177966 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gggaggaggaggaggggcgg 20 |||||||||||||||||||| Sbjct: 24375 gggaggaggaggaggggcgg 24394
>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13 Length = 347496 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tggtcgccgccaccaccgac 120 |||||||||||||||||||| Sbjct: 108127 tggtcgccgccaccaccgac 108108
>emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 6/14 Length = 300050 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tggtcgccgccaccaccgac 120 |||||||||||||||||||| Sbjct: 210750 tggtcgccgccaccaccgac 210731
>emb|BX088553.4| Mouse DNA sequence from clone RP23-115D24 on chromosome 4, complete sequence Length = 148581 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 ggcatcacttgctcaggatc 248 |||||||||||||||||||| Sbjct: 40466 ggcatcacttgctcaggatc 40447
>gb|AC009379.7| Drosophila melanogaster 3L BAC RP98-48M6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175963 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 422 gaaaccagtttggtggagagttgc 445 |||||||||||||||| ||||||| Sbjct: 71147 gaaaccagtttggtggggagttgc 71170
>gb|AC009378.7| Drosophila melanogaster 3L BAC RP98-9E8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 180387 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 gaaaccagtttggtggagagttgc 445 |||||||||||||||| ||||||| Sbjct: 39142 gaaaccagtttggtggggagttgc 39119
>gb|AF016581.4| Leishmania mexicana amazonensis NupM1 (TOR) gene, complete cds Length = 4166 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcggcgga 24 ||||||||||||||||| |||||| Sbjct: 437 gggaggaggaggaggggtggcgga 414
>dbj|AK137868.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130030K15 product:jumonji domain containing 2C, full insert sequence Length = 6585 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 ggcatcacttgctcaggatc 248 |||||||||||||||||||| Sbjct: 2664 ggcatcacttgctcaggatc 2645
>gb|AC135644.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0085H07, complete sequence Length = 133291 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 ggaggaggaggaggggcggcggaa 25 ||||||||||| |||||||||||| Sbjct: 94067 ggaggaggaggcggggcggcggaa 94090
>gb|AC010252.4| Homo sapiens chromosome 5 clone CTC-428I3, complete sequence Length = 209112 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcgg 20 |||||||||||||||||||| Sbjct: 34533 gggaggaggaggaggggcgg 34514
>emb|AL929345.15| Zebrafish DNA sequence from clone DKEY-211H10 in linkage group 23, complete sequence Length = 222615 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 atgaataatcttaagtattt 482 |||||||||||||||||||| Sbjct: 160066 atgaataatcttaagtattt 160047
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ggaggaggaggaggggcggcggaa 25 ||||||||||| |||||||||||| Sbjct: 26851839 ggaggaggaggcggggcggcggaa 26851816 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 gtcgccgccaccaccgacgc 122 |||||||||||||||||||| Sbjct: 16685116 gtcgccgccaccaccgacgc 16685135
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcgg 20 |||||||||||||||||||| Sbjct: 15357529 gggaggaggaggaggggcgg 15357510
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcgg 20 |||||||||||||||||||| Sbjct: 2430769 gggaggaggaggaggggcgg 2430750
>dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0613F06 Length = 184289 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcgg 20 |||||||||||||||||||| Sbjct: 25044 gggaggaggaggaggggcgg 25025
>dbj|AP005774.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0086N05 Length = 163670 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ggaggaggaggggcggcgga 24 |||||||||||||||||||| Sbjct: 19179 ggaggaggaggggcggcgga 19160
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ggaggaggaggggcggcgga 24 |||||||||||||||||||| Sbjct: 132982 ggaggaggaggggcggcgga 132963
>dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1014_H03 Length = 132696 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ggaggaggaggaggggcggc 21 |||||||||||||||||||| Sbjct: 128619 ggaggaggaggaggggcggc 128600
>dbj|AP004083.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_C01 Length = 124548 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ggaggaggaggaggggcggc 21 |||||||||||||||||||| Sbjct: 59067 ggaggaggaggaggggcggc 59048
>emb|BX005335.9| Zebrafish DNA sequence from clone DKEY-240N8, complete sequence Length = 211094 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 cttaagtatttaaatattaa 491 |||||||||||||||||||| Sbjct: 1742 cttaagtatttaaatattaa 1723
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ggaggaggaggaggggcggcggaa 25 |||||||||||||| ||||||||| Sbjct: 127794 ggaggaggaggaggtgcggcggaa 127771
>emb|AL954838.14| Zebrafish DNA sequence from clone DKEY-12B15 in linkage group 23, complete sequence Length = 268324 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 atgaataatcttaagtattt 482 |||||||||||||||||||| Sbjct: 163111 atgaataatcttaagtattt 163092
>gb|AE003518.3| Drosophila melanogaster chromosome 3L, section 67 of 83 of the complete sequence Length = 279088 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 gaaaccagtttggtggagagttgc 445 |||||||||||||||| ||||||| Sbjct: 218622 gaaaccagtttggtggggagttgc 218599
>gb|AC006216.1|F5F19 Arabidopsis thaliana chromosome 1 BAC F5F19 sequence, complete sequence Length = 110893 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 aatcttgcaggaaaccagtt 431 |||||||||||||||||||| Sbjct: 15438 aatcttgcaggaaaccagtt 15419
>dbj|AP003035.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-482L11, complete sequence Length = 170638 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gggaggaggaggaggggcgg 20 |||||||||||||||||||| Sbjct: 135151 gggaggaggaggaggggcgg 135132
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cggcggaatgccgggcgcgg 37 |||||||||||||||||||| Sbjct: 684839 cggcggaatgccgggcgcgg 684858
>emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86 Length = 407339 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 ttaagtatttaaatattaac 492 |||||||||||||||||||| Sbjct: 379316 ttaagtatttaaatattaac 379335
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ggaggaggaggaggggcggcggaa 25 ||||||||||| |||||||||||| Sbjct: 27178892 ggaggaggaggcggggcggcggaa 27178869 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 gtcgccgccaccaccgacgc 122 |||||||||||||||||||| Sbjct: 16778939 gtcgccgccaccaccgacgc 16778958
>emb|CR855327.11| Zebrafish DNA sequence from clone DKEY-84C11 in linkage group 1, complete sequence Length = 183806 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gggaggaggaggaggggcgg 20 |||||||||||||||||||| Sbjct: 170490 gggaggaggaggaggggcgg 170509 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,623,160 Number of Sequences: 3902068 Number of extensions: 4623160 Number of successful extensions: 408182 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 404569 Number of HSP's gapped (non-prelim): 3589 length of query: 494 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 472 effective length of database: 17,147,199,772 effective search space: 8093478292384 effective search space used: 8093478292384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)