>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                           
Query: 446     gcacacaaggtcatccttgctgcgaggtcccctgtactgatggcggagttctttggacac 505
               ||||||||| ||||||| ||||| || ||||||||  | ||||| ||||||||||||| |
Sbjct: 7853580 gcacacaagatcatcctcgctgctagatcccctgtcttcatggctgagttctttggaccc 7853521

                                                        
Query: 506     atgaaggagacgagctcacagcgcgtcgagatcaaggacat 546
               ||||||||||  ||||||||| | || ||||||||||||||
Sbjct: 7853520 atgaaggagagtagctcacagtgtgtggagatcaaggacat 7853480

>dbj|AP005107.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0431E05
          Length = 146091

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                         
Query: 446   gcacacaaggtcatccttgctgcgaggtcccctgtactgatggcggagttctttggacac 505
             ||||||||| ||||||| ||||| || ||||||||  | ||||| ||||||||||||| |
Sbjct: 67962 gcacacaagatcatcctcgctgctagatcccctgtcttcatggctgagttctttggaccc 67903

                                                      
Query: 506   atgaaggagacgagctcacagcgcgtcgagatcaaggacat 546
             ||||||||||  ||||||||| | || ||||||||||||||
Sbjct: 67902 atgaaggagagtagctcacagtgtgtggagatcaaggacat 67862

>dbj|AK067034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089M24, full
           insert sequence
          Length = 1951

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 87/101 (86%)
 Strand = Plus / Plus

                                                                       
Query: 446 gcacacaaggtcatccttgctgcgaggtcccctgtactgatggcggagttctttggacac 505
           ||||||||| ||||||| ||||| || ||||||||  | ||||| ||||||||||||| |
Sbjct: 887 gcacacaagatcatcctcgctgctagatcccctgtcttcatggctgagttctttggaccc 946

                                                    
Query: 506 atgaaggagacgagctcacagcgcgtcgagatcaaggacat 546
           ||||||||||  ||||||||| | || ||||||||||||||
Sbjct: 947 atgaaggagagtagctcacagtgtgtggagatcaaggacat 987

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                          
Query: 504     acatgaaggagacgagctcacagcgcgtcgagatcaaggacat 546
               |||||||||||| |||||| | | |||||||||||| ||||||
Sbjct: 5676177 acatgaaggagaagagctcccggagcgtcgagatcagggacat 5676219

>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0412D08
          Length = 150188

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                         
Query: 504    acatgaaggagacgagctcacagcgcgtcgagatcaaggacat 546
              |||||||||||| |||||| | | |||||||||||| ||||||
Sbjct: 131553 acatgaaggagaagagctcccggagcgtcgagatcagggacat 131595

>dbj|AP005416.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0094P23
          Length = 149341

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 504   acatgaaggagacgagctcacagcgcgtcgagatcaaggacat 546
             |||||||||||| |||||| | | |||||||||||| ||||||
Sbjct: 30802 acatgaaggagaagagctcccggagcgtcgagatcagggacat 30844

>dbj|AK105288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-F01, full
           insert sequence
          Length = 1301

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 504 acatgaaggagacgagctcacagcgcgtcgagatcaaggacat 546
           |||||||||||| |||||| | | |||||||||||| ||||||
Sbjct: 734 acatgaaggagaagagctcccggagcgtcgagatcagggacat 776

>gb|AC124237.13| Mus musculus chromosome 17, clone RP23-281A8, complete sequence
          Length = 200410

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 249   gttatctcaggaatgattctt 269
             |||||||||||||||||||||
Sbjct: 98903 gttatctcaggaatgattctt 98923

>emb|AJ812018.1| Pseudomonas putida aroA gene for 3-phosphoshikimate
           1-carboxyvinyltransferase
          Length = 1914

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 195 aagattgttcgcttccagttc 215
           |||||||||||||||||||||
Sbjct: 64  aagattgttcgcttccagttc 44

>gb|AC123704.21| Mus musculus chromosome 15, clone RP23-351F24, complete sequence
          Length = 202330

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 115   tgaagaaaagagtgtgtcatg 135
             |||||||||||||||||||||
Sbjct: 89784 tgaagaaaagagtgtgtcatg 89764

>emb|CT025725.10| Mouse DNA sequence from clone RP23-477K5 on chromosome 17, complete
              sequence
          Length = 193217

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 249    gttatctcaggaatgattctt 269
              |||||||||||||||||||||
Sbjct: 174977 gttatctcaggaatgattctt 174997

>gb|AC153728.1| Mus musculus  BAC RP23-83N17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 226417

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    aagagtgtgtcatgtatatt 141
              ||||||||||||||||||||
Sbjct: 222255 aagagtgtgtcatgtatatt 222274

>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 527     cgcgtcgagatcaaggacat 546
               ||||||||||||||||||||
Sbjct: 2327258 cgcgtcgagatcaaggacat 2327277

>gb|BC076185.1| Danio rerio zgc:92705, mRNA (cDNA clone MGC:92705 IMAGE:7075156),
            complete cds
          Length = 1727

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 533  gagatcaaggacattgatgc 552
            ||||||||||||||||||||
Sbjct: 1069 gagatcaaggacattgatgc 1088

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 310     gccagcacgagcagcaacgg 329
               ||||||||||||||||||||
Sbjct: 3149425 gccagcacgagcagcaacgg 3149444

>gb|AC113201.15| Mus musculus chromosome 6, clone RP23-271G7, complete sequence
          Length = 205816

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 122  aagagtgtgtcatgtatatt 141
            ||||||||||||||||||||
Sbjct: 6976 aagagtgtgtcatgtatatt 6995

>emb|CR388419.13| Zebrafish DNA sequence from clone DKEY-40C17 in linkage group 2,
             complete sequence
          Length = 128710

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 294   tactgaaggatgatttgccagcac 317
             ||||||||||| ||||||||||||
Sbjct: 28086 tactgaaggataatttgccagcac 28063

>gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, complete sequence
          Length = 247394

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    aagagtgtgtcatgtatatt 141
              ||||||||||||||||||||
Sbjct: 173182 aagagtgtgtcatgtatatt 173201

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 310     gccagcacgagcagcaacgg 329
               ||||||||||||||||||||
Sbjct: 1326792 gccagcacgagcagcaacgg 1326811

>gb|BC047077.1| Homo sapiens cDNA clone IMAGE:5267471
          Length = 1794

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 144 accggtcttgggtatcacgt 163
           ||||||||||||||||||||
Sbjct: 475 accggtcttgggtatcacgt 456

>gb|BC042565.1| Homo sapiens cDNA clone IMAGE:4827946
          Length = 3611

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 144 accggtcttgggtatcacgt 163
           ||||||||||||||||||||
Sbjct: 758 accggtcttgggtatcacgt 739

>ref|NM_001002399.1| Danio rerio zgc:92705 (zgc:92705), mRNA
          Length = 1727

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 533  gagatcaaggacattgatgc 552
            ||||||||||||||||||||
Sbjct: 1069 gagatcaaggacattgatgc 1088

>gb|AC034159.7| Homo sapiens BAC clone RP11-344G13 from 4, complete sequence
          Length = 202555

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    accggtcttgggtatcacgt 163
              ||||||||||||||||||||
Sbjct: 100932 accggtcttgggtatcacgt 100913

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 310     gccagcacgagcagcaacgg 329
               ||||||||||||||||||||
Sbjct: 1306129 gccagcacgagcagcaacgg 1306110

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 527     cgcgtcgagatcaaggacat 546
               ||||||||||||||||||||
Sbjct: 2425392 cgcgtcgagatcaaggacat 2425411

>gb|AC132480.5| Mus musculus BAC clone RP23-11I14 from 6, complete sequence
          Length = 230313

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   aagagtgtgtcatgtatatt 141
             ||||||||||||||||||||
Sbjct: 64624 aagagtgtgtcatgtatatt 64605


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,534,831
Number of Sequences: 3902068
Number of extensions: 3534831
Number of successful extensions: 60517
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60264
Number of HSP's gapped (non-prelim): 253
length of query: 565
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 542
effective length of database: 17,143,297,704
effective search space: 9291667355568
effective search space used: 9291667355568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)