| Clone Name | basd25e10 |
|---|---|
| Clone Library Name | barley_pub |
>YDOD_SCHPO (O13733) Hypothetical protein C15A10.13 in chromosome I| Length = 637 Score = 50.4 bits (119), Expect = 3e-06 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +3 Query: 36 RALRDTFPPARAAGIMALSVTSSYYEMTEIATRILPNIVVLTFDPDSDVRTKAFQATDQF 215 R+L+D F PAR A + L +Y++ ++A ++ P++V L D + +R A TDQF Sbjct: 465 RSLKDPFVPAREAALKVLLSVQNYFDTKDVAIKLFPSVVPLLIDENEGIRRTAEDVTDQF 524 Query: 216 LQIAK 230 L K Sbjct: 525 LSRIK 529
>VC22_VACCC (P21106) Protein C22/B28| Length = 122 Score = 33.1 bits (74), Expect = 0.51 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 6/71 (8%) Frame = -3 Query: 224 YLQELVSSLESLGPHITVWVKCKDNNVRQYTGC------NLCHFVVRTSDTQCHDSSCSS 63 +L ++ + + PH KCKDN +++ C LC T T C + +S Sbjct: 11 FLSCIIINGRDIAPHAPSDGKCKDNEYKRHNLCPGTYASRLCDSKTNTQCTPCGSGTFTS 70 Query: 62 RREGIT*CTDC 30 R + C C Sbjct: 71 RNNHLPACLSC 81
>HMEN_DROVI (P09145) Segmentation polarity homeobox protein engrailed| Length = 584 Score = 32.7 bits (73), Expect = 0.67 Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 11/105 (10%) Frame = +3 Query: 234 HHEKLNTGDNRAAEGTGVQLKPGNASL---------LGWAMSSITQKGKPSDHGPVSTAN 386 H E + + R+A G + P A L LG +++Q G+ PV+T + Sbjct: 297 HEELVQSRLRRSAAGNPNAVLPPTAKLTEPSVEKSALGSLCKTVSQIGQAQSTTPVTTPS 356 Query: 387 ASNSQVSAPP--STTSDTHSXXXXXXXXXXSNSFDQTAPASASSS 515 + SQ+++PP S S S S+S ++ AS+ +S Sbjct: 357 SRPSQLASPPPASNASTISSSSSTAASCSASSSSGCSSAASSLNS 401
>ACR1_ACTEQ (Q3C258) Acrorhagin-1 precursor (Acrorhagin I)| Length = 70 Score = 32.7 bits (73), Expect = 0.67 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Frame = -3 Query: 239 MMLFCYLQELVSSLESLGPHITVWVKCKDNNVRQYTGCNLCHFVVRTSDTQCHD-SSCSS 63 M +F L +V S+ES WVKC+ + +Y C + SD+ CHD SC Sbjct: 5 MTIFLVLGVIVYSVESSSTPDGTWVKCRHDCFTKYKSCQM-------SDS-CHDEQSCHQ 56 Query: 62 RREGIT*CTDCEC 24 T C + C Sbjct: 57 CHVKHTDCVNTGC 69
>DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contains: Dentin| phosphoprotein (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)] Length = 1253 Score = 32.0 bits (71), Expect = 1.1 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Frame = +3 Query: 330 SSITQKGKPSDHGPVS-TANASNSQVSAPPSTTSDTHSXXXXXXXXXXSNSFDQTAPASA 506 SS + SD+ S ++N+SNS S+ S +SD+ S SNS D + + + Sbjct: 642 SSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSSSSDSSNSSDSSDSSDS 701 Query: 507 SSSMD 521 S+S + Sbjct: 702 SNSSE 706 Score = 30.0 bits (66), Expect = 4.3 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = +3 Query: 357 SDHGPVSTANASNSQVSAPPSTTSDTHSXXXXXXXXXXSNSFDQTAPASASSSMD 521 SD S ++ SNS S+ S +SD+ + S+S D ++ + +SSS D Sbjct: 634 SDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSSSSD 688 Score = 29.3 bits (64), Expect = 7.4 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = +3 Query: 357 SDHGPVSTANASNSQVSAPPSTTSDTHSXXXXXXXXXXSNSFDQTAPASASSSMD 521 S + S +++SNS S+ S +SD+ + SNS D + + +S S D Sbjct: 724 SSNSNSSDSDSSNSSDSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSD 778
>ADRM1_HUMAN (Q16186) Adhesion-regulating molecule 1 precursor (110 kDa cell| membrane glycoprotein) (Gp110) Length = 407 Score = 31.6 bits (70), Expect = 1.5 Identities = 24/80 (30%), Positives = 32/80 (40%) Frame = +3 Query: 276 GTGVQLKPGNASLLGWAMSSITQKGKPSDHGPVSTANASNSQVSAPPSTTSDTHSXXXXX 455 G G PG ASLLG G P S+++ S S P STTS T + Sbjct: 182 GLGALTGPGLASLLG-------SSGPPGSSS--SSSSRSQSAAVTPSSTTSSTRATPAPS 232 Query: 456 XXXXXSNSFDQTAPASASSS 515 S + AP+S + + Sbjct: 233 APAAASATSPSPAPSSGNGA 252
>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2| precursor Length = 503 Score = 31.2 bits (69), Expect = 1.9 Identities = 26/130 (20%), Positives = 47/130 (36%) Frame = +3 Query: 126 ATRILPNIVVLTFDPDSDVRTKAFQATDQFLQIAKQHHEKLNTGDNRAAEGTGVQLKPGN 305 A + N T D S T + ++ + KL+T + ++ T Sbjct: 111 AMNVYINNAASTADSTSSTATSTSTTSSSSTSVSSKTSTKLDTKTSTSSSATHSSSSSST 170 Query: 306 ASLLGWAMSSITQKGKPSDHGPVSTANASNSQVSAPPSTTSDTHSXXXXXXXXXXSNSFD 485 S + + T S S++ ++ S S STTS + S S+S + Sbjct: 171 TSTTTSSSETTTSSSSSSS----SSSTSTTSTTSTTSSTTSTSSSPSTTSSSTSASSSSE 226 Query: 486 QTAPASASSS 515 ++ + SSS Sbjct: 227 TSSTQATSSS 236
>E78C_DROME (P45447) Ecdysone-induced protein 78C (DR-78)| Length = 866 Score = 31.2 bits (69), Expect = 1.9 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 5/104 (4%) Frame = +3 Query: 219 QIAKQHHEKLNTGDNRAAEGTGVQLKPGNASLLG-----WAMSSITQKGKPSDHGPVSTA 383 Q +QH + + + G Q N +L + +SS+ Q G S+H S++ Sbjct: 184 QQQRQHTHQQQQQQQQQQQHPGQQQHQLNCTLSNGGGALYTISSVHQFGPASNHNTSSSS 243 Query: 384 NASNSQVSAPPSTTSDTHSXXXXXXXXXXSNSFDQTAPASASSS 515 +S++ S+P S S S S S +A +S SS Sbjct: 244 PSSSAAHSSPDSGCSSASSSGSSRSCGSSSASSSSSAVSSTISS 287
>CRF1_ASPFU (Q8J0P4) Probable glycosidase crf1 precursor (EC 3.2.-.-) (Crh-like| protein) (Allergen Asp f 9) Length = 395 Score = 30.4 bits (67), Expect = 3.3 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +3 Query: 369 PVSTANASNSQVSAPPSTTSDTHSXXXXXXXXXXSNSFDQTAPASASSS 515 P T++ SNS SA P+TT T S S S ++ S++S+ Sbjct: 311 PSGTSSGSNSSSSAEPTTTGGTGSSNTGSGSGSGSGSGSSSSTGSSTSA 359
>WSC3_YEAST (Q12215) Cell wall integrity and stress response component 3| precursor Length = 556 Score = 30.4 bits (67), Expect = 3.3 Identities = 22/81 (27%), Positives = 31/81 (38%) Frame = +3 Query: 273 EGTGVQLKPGNASLLGWAMSSITQKGKPSDHGPVSTANASNSQVSAPPSTTSDTHSXXXX 452 EG+ P S L A S T + ST S+ ++ STTS T S Sbjct: 146 EGSSTSYMPSTTSSLSSAQISSTTRR-------TSTDMKSSEMIATTVSTTSTTSSSTSS 198 Query: 453 XXXXXXSNSFDQTAPASASSS 515 S++ T ++ SSS Sbjct: 199 TTSSTTSSTTSSTTSSTTSSS 219
>SELA_EUBAC (Q9S3K3) L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)| (Cysteinyl-tRNA(Sec) selenium transferase) (Selenocysteine synthase) (Selenocysteinyl-tRNA(Sec) synthase) Length = 467 Score = 30.4 bits (67), Expect = 3.3 Identities = 18/67 (26%), Positives = 33/67 (49%) Frame = +3 Query: 78 IMALSVTSSYYEMTEIATRILPNIVVLTFDPDSDVRTKAFQATDQFLQIAKQHHEKLNTG 257 I AL T YY EIA + +P + +LT+ D +++ KA + + ++ K+ G Sbjct: 334 ICALEATMRYYIEEEIAIKKIPTLRMLTYKLD-EIKEKAQRLNEMIGRLGIPAEVKIEVG 392 Query: 258 DNRAAEG 278 ++ G Sbjct: 393 HSQVGGG 399
>PHL2_LEPIN (P59116) Sphingomyelinase C 2 precursor (EC 3.1.4.12)| (Sphingomyelin phosphodiesterase 2) (SMase 2) Length = 623 Score = 30.0 bits (66), Expect = 4.3 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = +3 Query: 291 LKPGN-ASLLGWAMSSITQKGKPSDHGPVSTANASNSQVSAPPS 419 L P N AS +++ + G P+D P + A+A+N+QV+A P+ Sbjct: 88 LNPVNPASANSNQVNAAPENGSPADPNPANLASANNNQVNAVPA 131
>GAP1_DROME (P48423) GTPase-activating protein (Ras GTPase-activating protein)| Length = 1163 Score = 30.0 bits (66), Expect = 4.3 Identities = 24/74 (32%), Positives = 36/74 (48%) Frame = +3 Query: 213 FLQIAKQHHEKLNTGDNRAAEGTGVQLKPGNASLLGWAMSSITQKGKPSDHGPVSTANAS 392 F Q +QHH++L ++ QL+ N +L + G S P ST + Sbjct: 1092 FHQQQQQHHQQLQQQQSQFQPLRSHQLQRHNNNL------NNNNCGNGSSSSPSST---T 1142 Query: 393 NSQVSAPPSTTSDT 434 +S V+APPSTTS + Sbjct: 1143 SSVVAAPPSTTSSS 1156
>YCHD_SCHPO (Q9Y7V2) Protein C645.13 in chromosome III| Length = 721 Score = 30.0 bits (66), Expect = 4.3 Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 1/156 (0%) Frame = +3 Query: 48 DTFPPARAAGIMALSVTSSYYEMTEIATRILPNIVVLTFDPDSDVRTKAFQATDQFLQIA 227 D + A G+ + SYY + + + V + + D + +T A+++ + Sbjct: 42 DCWQHASCVGLADKDIPESYYCEVCHSRSDVSSQVQNSPNKDEEHQTADLLASNEGNEKN 101 Query: 228 KQHHEKLNTGDNRA-AEGTGVQLKPGNASLLGWAMSSITQKGKPSDHGPVSTANASNSQV 404 + + +++ A + +G +L+ + + T+ G+ S P+ + +S Sbjct: 102 NEENNVVSSDSKEAITKESGAELESSEPASTNSNVGMTTRSGRQSPRTPIGSTTPKSSH- 160 Query: 405 SAPPSTTSDTHSXXXXXXXXXXSNSFDQTAPASASS 512 +PPST S S + +T+P AS+ Sbjct: 161 -SPPSTRKRRGSVGTTATHTKRSKNAPKTSPKDASN 195
>ADRM1_RAT (Q9JMB5) Adhesion-regulating molecule 1 precursor (110 kDa cell| membrane glycoprotein) (Gp110) Length = 407 Score = 30.0 bits (66), Expect = 4.3 Identities = 23/80 (28%), Positives = 32/80 (40%) Frame = +3 Query: 276 GTGVQLKPGNASLLGWAMSSITQKGKPSDHGPVSTANASNSQVSAPPSTTSDTHSXXXXX 455 G G PG ASLLG G P+ S+++ S S P STTS + Sbjct: 182 GLGALTGPGLASLLG-------SSGPPASSS--SSSSRSQSAAVTPSSTTSSARATPAPS 232 Query: 456 XXXXXSNSFDQTAPASASSS 515 S + AP+S + + Sbjct: 233 APAAASATSPSPAPSSGNGT 252
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 29.6 bits (65), Expect = 5.6 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Frame = +3 Query: 330 SSITQKGKPSDHGPVSTANASNSQVSAPPSTTSD----THSXXXXXXXXXXSNSF--DQT 491 SS + G+ + G T N+S+S ++PP+T+S TH+ S++ + Sbjct: 33 SSTSGSGQSTSSG---TTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSS 89 Query: 492 APASASSS 515 AP++ASS+ Sbjct: 90 APSTASST 97
>FOXF2_HUMAN (Q12947) Forkhead box protein F2 (Forkhead-related protein FKHL6)| (Forkhead-related transcription factor 2) (FREAC-2) (Forkhead-related activator 2) Length = 444 Score = 29.6 bits (65), Expect = 5.6 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +3 Query: 372 VSTANASNSQVSAPPSTTSDTHSXXXXXXXXXXSNSFDQTAPASASSSMDGWG 530 +S A+ + +A P TTS + S S+S +AP++A S G G Sbjct: 28 MSPPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGGG 80
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 29.6 bits (65), Expect = 5.6 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Frame = +3 Query: 330 SSITQKGKPSDHGPVSTANASNSQVSAPPSTTSD----THSXXXXXXXXXXSNSF--DQT 491 SS + G+ + G T N+S+S ++PP+T+S TH+ S++ + Sbjct: 33 SSTSGSGQSTSSG---TTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSS 89 Query: 492 APASASSS 515 AP++ASS+ Sbjct: 90 APSTASST 97
>DPOL_HHV1A (P07917) DNA polymerase (EC 2.7.7.7)| Length = 1235 Score = 29.3 bits (64), Expect = 7.4 Identities = 18/50 (36%), Positives = 26/50 (52%) Frame = +3 Query: 114 MTEIATRILPNIVVLTFDPDSDVRTKAFQATDQFLQIAKQHHEKLNTGDN 263 +TE+A R LP VVL FD + F+ F+ + KQ+ + TG N Sbjct: 424 LTELAARGLPTPVVLEFDSE-------FEMLLAFMTLVKQYGPEFVTGYN 466
>SP96_DICDI (P14328) Spore coat protein SP96| Length = 600 Score = 29.3 bits (64), Expect = 7.4 Identities = 15/59 (25%), Positives = 31/59 (52%) Frame = +3 Query: 339 TQKGKPSDHGPVSTANASNSQVSAPPSTTSDTHSXXXXXXXXXXSNSFDQTAPASASSS 515 T + S VS++ + +S S+ PS+++ + S S+S ++P+S++SS Sbjct: 435 TSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSASS 493 Score = 29.3 bits (64), Expect = 7.4 Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 3/92 (3%) Frame = +3 Query: 249 NTGDNRAAEGTGVQLKPGNASLLGWAMSSITQKGKPSDHGPVSTANASNSQVSAPPS--- 419 +T ++ A+ + V +S + SS PS ++++ S+S S+ PS Sbjct: 434 STSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSA--ASSSPSSSAASSSPSSSA 491 Query: 420 TTSDTHSXXXXXXXXXXSNSFDQTAPASASSS 515 ++S + S S++ +AP+S++SS Sbjct: 492 SSSSSPSSSASSSSAPSSSASSSSAPSSSASS 523
>K0056_HUMAN (P42695) Protein KIAA0056| Length = 1498 Score = 29.3 bits (64), Expect = 7.4 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +3 Query: 138 LPNIVVLTFDPDSDVRTKAFQATDQFLQIAKQHHEKLNTGDN 263 L +V + D +S V+ KA + DQ L +HH ++GD+ Sbjct: 621 LRGVVPVVMDCESTVQEKALEFLDQLLLQNIRHHSHFHSGDD 662
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)| Length = 825 Score = 29.3 bits (64), Expect = 7.4 Identities = 15/51 (29%), Positives = 27/51 (52%) Frame = +3 Query: 363 HGPVSTANASNSQVSAPPSTTSDTHSXXXXXXXXXXSNSFDQTAPASASSS 515 HGP++ A+A +APPS + + + S+S ++ AS+SS+ Sbjct: 563 HGPLAPASAG----AAPPSASPSSQAAVAAASSSSASSSSASSSSASSSSA 609
>VIT2_CHICK (P02845) Vitellogenin-2 precursor (Vitellogenin II) (Major| vitellogenin) [Contains: Lipovitellin-1 (Lipovitellin I) (LVI); Phosvitin (PV); Lipovitellin-2 (Lipovitellin II) (LVII); YGP40] Length = 1850 Score = 29.3 bits (64), Expect = 7.4 Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 9/105 (8%) Frame = +3 Query: 228 KQHHEKLNTGDNRAAEGTGVQLKPGNASLLGWAMSSITQKGKPSDHGPVSTAN------- 386 ++ ++++ N+ A + K N+S + SS + K S S+++ Sbjct: 1152 EEENDQVKQARNKDASSSSRSSKSSNSSKRSSSKSSNSSKRSSSSSSSSSSSSRSSSSSS 1211 Query: 387 --ASNSQVSAPPSTTSDTHSXXXXXXXXXXSNSFDQTAPASASSS 515 +SNS+ S+ S +S + S S+S ++ +S SSS Sbjct: 1212 SSSSNSKSSSSSSKSSSSSSRSRSSSKSSSSSSSSSSSSSSKSSS 1256
>UVRB_MYCMO (Q6KH72) UvrABC system protein B (Protein uvrB) (Excinuclease ABC| subunit B) Length = 659 Score = 29.3 bits (64), Expect = 7.4 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Frame = +3 Query: 87 LSVTSSYYEMTEIATRILPNIVVLT--FDPDSDVRTKAFQATDQFLQIAKQHHEKLNT 254 +S T S YE+ + I+ I+ T DP ++R + Q D F +I KQ +K T Sbjct: 393 ISATPSDYEINQAHGEIVKQIIRPTGLLDPLIEIRREQNQVEDMFDEIQKQKAKKQRT 450
>SUHW2_HUMAN (Q86YH2) Suppressor of hairy wing homolog 2 (5'OY11.1) (Zinc finger| protein 632) Length = 543 Score = 29.3 bits (64), Expect = 7.4 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 1/91 (1%) Frame = -3 Query: 281 STFGCPVVSCVKLFMMLFCYLQELVSSLESLGPHITVWVKCKDNNVRQYTGCNLCHFVVR 102 +TF C +SCVK+ + V + + H+ + K ++++ +T C CH Sbjct: 305 TTFKC--LSCVKVL--------KNVKFMNHVKHHLE-FEKQRNDSWENHTTCQHCHRQFP 353 Query: 101 TS-DTQCHDSSCSSRREGIT*CTDCECXINT 12 T QCH + + +E T C CE T Sbjct: 354 TPFQLQCHIENVHTAQEPSTVCKICELSFET 384
>DP87_DICDI (Q04503) Prespore protein DP87 precursor| Length = 555 Score = 29.3 bits (64), Expect = 7.4 Identities = 17/64 (26%), Positives = 33/64 (51%) Frame = +3 Query: 324 AMSSITQKGKPSDHGPVSTANASNSQVSAPPSTTSDTHSXXXXXXXXXXSNSFDQTAPAS 503 A ++ T G + G S ++A++S S+ S++ + + S++ +AP+S Sbjct: 457 ATTAGTTTGGTTTGGSTSDSSAASSADSSAASSSPSSSAASSAASSEPSSSAASSSAPSS 516 Query: 504 ASSS 515 ASSS Sbjct: 517 ASSS 520
>IPO4_HUMAN (Q8TEX9) Importin-4 (Importin 4b) (Imp4b) (Ran-binding protein 4)| (RanBP4) Length = 1081 Score = 28.9 bits (63), Expect = 9.6 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 4/70 (5%) Frame = +3 Query: 39 ALRDTFPPARAAGIMALSVTSSYYEMTEIATRILPNIVVLTF----DPDSDVRTKAFQAT 206 ALR P R AG++ L+V S I R+LP ++ + DP VR A A Sbjct: 360 ALRSESPYQRKAGLLVLAVLSD-GAGDHIRQRLLPPLLQIVCKGLEDPSQVVRNAALFAL 418 Query: 207 DQFLQIAKQH 236 QF + + H Sbjct: 419 GQFSENLQPH 428
>PRA1_CANAL (P87020) pH-regulated antigen PRA1 precursor (58 kDa| fibrinogen-binding mannoprotein) Length = 299 Score = 28.9 bits (63), Expect = 9.6 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +3 Query: 330 SSITQKGKPSDHGPVSTANASNSQVSAPPSTTSDTHS 440 SS SD G STA++S+ + PS T+D +S Sbjct: 251 SSFEDSDSGSDSGASSTASSSHQHTDSNPSATTDANS 287
>RL24_OCEIH (Q8ETX2) 50S ribosomal protein L24| Length = 103 Score = 28.9 bits (63), Expect = 9.6 Identities = 14/52 (26%), Positives = 26/52 (50%) Frame = +3 Query: 216 LQIAKQHHEKLNTGDNRAAEGTGVQLKPGNASLLGWAMSSITQKGKPSDHGP 371 + + K K+ +G +R EGT ++ P N +L ++ + + KPS P Sbjct: 1 MHVKKGDKVKVLSGKDRGKEGTVLEAFPKNERVLVEGVNMVQKHAKPSQENP 52
>PRY3_YEAST (P47033) Protein PRY3 (Pathogen related in Sc 3)| Length = 881 Score = 28.9 bits (63), Expect = 9.6 Identities = 16/49 (32%), Positives = 25/49 (51%) Frame = +3 Query: 369 PVSTANASNSQVSAPPSTTSDTHSXXXXXXXXXXSNSFDQTAPASASSS 515 P+ + +S+S S+ STTSDT S + + T ++ASSS Sbjct: 160 PLISTVSSSSSSSSSTSTTSDTVSTISSSIMPAVAQGYTTTVSSAASSS 208
>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1| Length = 841 Score = 28.9 bits (63), Expect = 9.6 Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 4/120 (3%) Frame = +3 Query: 12 SIDXAFTVRALRDTFPPARAAGIMALSVTSSYYEMTEIATRILPNIVVLTF----DPDSD 179 +++ A TV+AL D F P LP VV T DP + Sbjct: 623 NLNFATTVQALSDLFKP-------------------------LPGFVVATVKTKPDPKNS 657 Query: 180 VRTKAFQATDQFLQIAKQHHEKLNTGDNRAAEGTGVQLKPGNASLLGWAMSSITQKGKPS 359 +T + + +Q + ++T D +G +QLK + G + SSI + GK S Sbjct: 658 GKTLSMGFGFVEFRTKEQANVAISTLDGHVLDGHKLQLKLSHKQGTGTSASSIKKSGKSS 717
>EFG_BACHD (Q9Z9L7) Elongation factor G (EF-G)| Length = 692 Score = 28.9 bits (63), Expect = 9.6 Identities = 12/37 (32%), Positives = 24/37 (64%) Frame = +3 Query: 138 LPNIVVLTFDPDSDVRTKAFQATDQFLQIAKQHHEKL 248 L ++V ++ D RT+A + D++ + A+++HEKL Sbjct: 178 LVDMVAYFYEDDLGTRTEAKEIPDEYKEQAQEYHEKL 214
>SACB_STRMU (P11701) Levansucrase precursor (EC 2.4.1.10)| (Beta-D-fructofuranosyl transferase) (Sucrose 6-fructosyl transferase) Length = 795 Score = 28.9 bits (63), Expect = 9.6 Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 8/130 (6%) Frame = +3 Query: 69 AAGIMALSVTSSYYEMTEIATRILPNIVVLTFDPDSDVRTKAFQATDQFLQIAKQHHEKL 248 A GI+ L E+ + T +L + +V D R + D++ +L Sbjct: 466 AIGILKLKGDKKTPEVDQFYTPLLSSTMV----SDELERPNVVKLGDKYYLFTAS---RL 518 Query: 249 NTGDNRAAEGTGVQLKPGNASLLGWAMSSITQKGKP-SDHGPVSTAN-------ASNSQV 404 N G N A ++ N +LG+ +T KP ++ G V TA+ A+ S Sbjct: 519 NHGSNNDAWNKANEVVGDNVVMLGYVSDQLTNGYKPLNNSGVVLTASVPADWRTATYSYY 578 Query: 405 SAPPSTTSDT 434 + P + +SDT Sbjct: 579 AVPVAGSSDT 588
>YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 precursor| Length = 317 Score = 28.9 bits (63), Expect = 9.6 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Frame = +3 Query: 297 PGNASLLGWAMSSITQKGKPSDHGPVSTANASNSQVSAPPSTTSDTHSXXXXXXXXXXSN 476 P ++S + S + S S++++S S S+ S+ S S+ Sbjct: 165 PSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSS 224 Query: 477 SF-DQTAPASASSS 515 SF T PAS+SSS Sbjct: 225 SFITSTTPASSSSS 238
>SIM1_YEAST (P40472) Protein SIM1 precursor| Length = 475 Score = 28.9 bits (63), Expect = 9.6 Identities = 13/47 (27%), Positives = 26/47 (55%) Frame = +3 Query: 375 STANASNSQVSAPPSTTSDTHSXXXXXXXXXXSNSFDQTAPASASSS 515 S++ +S+S+ +AP ST T S +S T+P++++S+ Sbjct: 133 SSSVSSSSEEAAPTSTVVSTSSATQSSASSATKSSTSSTSPSTSTST 179 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,409,782 Number of Sequences: 219361 Number of extensions: 1455304 Number of successful extensions: 3963 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 3747 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3949 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4258037034 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)