ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd25e09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470454.1| Oryza sativa (japonica cultivar-group), mRNA 109 1e-20
2dbj|AK072499.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 1e-20
3dbj|AK060748.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 1e-20
4gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 82 2e-12
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
7dbj|AB089269.1| Triticum aestivum D31 mRNA for fructan exohydrol... 52 0.002
8gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 42 2.1
9gb|AC100708.10| Mus musculus chromosome 10, clone RP23-169I18, c... 42 2.1
10gb|AC108724.4| Homo sapiens 3 BAC RP11-413E6 (Roswell Park Cance... 42 2.1
11gb|AC138773.5| Homo sapiens BAC clone RP11-1320L20 from UL, comp... 42 2.1
12gb|AC132265.4| Mus musculus BAC clone RP24-373J20 from chromosom... 42 2.1
13emb|AL592170.21| Human DNA sequence from clone RP11-298A19 on ch... 42 2.1
14gb|AY109834.1| Zea mays CL7866_1 mRNA sequence 42 2.1
15ref|XM_418865.1| PREDICTED: Gallus gallus similar to DERP13 (der... 40 8.4
16gb|AC144385.2| Pan troglodytes BAC clone CH251-23H14 from X, com... 40 8.4
17gb|AC147070.5| Homo sapiens chromosome 4 clone RP13-1008F15, com... 40 8.4
18gb|AC147055.2| Homo sapiens BAC clone RP11-1267H10 from 4, compl... 40 8.4
19gb|AC123037.4| Mus musculus BAC clone RP24-527F14 from chromosom... 40 8.4
20gb|AC126032.4| Mus musculus BAC clone RP24-94B12 from chromosome... 40 8.4
21emb|CR854849.7| Human DNA sequence from clone RP13-79M23 on chro... 40 8.4
22emb|AL611962.6| Human DNA sequence from clone RP11-45J16 on chro... 40 8.4
23emb|AL603890.14| Human DNA sequence from clone RP11-584P2 on chr... 40 8.4
24emb|AL583825.8| Human DNA sequence from clone RP11-362H12 on chr... 40 8.4
25emb|AL445468.8| Human DNA sequence from clone RP11-74P14 on chro... 40 8.4
26emb|AL365443.16| Human DNA sequence from clone RP11-219C24 on ch... 40 8.4
27emb|AL157712.14| Human DNA sequence from clone RP11-339B9 on chr... 40 8.4
28emb|AL035086.12|HS44A20 Human DNA sequence from clone RP1-44A20 ... 40 8.4
29emb|BX927375.6| Zebrafish DNA sequence from clone CH211-258B24 i... 40 8.4
30gb|AC112175.2| Homo sapiens chromosome 5 clone CTD-2568P10, comp... 40 8.4
31dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
32dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
33gb|AC126281.3| Homo sapiens cosmid clone XXcos-2173C8 from 4, co... 40 8.4
34gb|AC145688.4| Pan troglodytes BAC clone CH251-346A10 from chrom... 40 8.4
35gb|AF328509.1|AF328509 Homo sapiens clone 4qtel_2173c8t3 sequence 40 8.4
36gb|AF277315.6| Homo sapiens chromosome X clone RP5-865E18, RP5-1... 40 8.4
37gb|AC016696.8| Homo sapiens BAC clone RP11-130P22 from 2, comple... 40 8.4
38gb|AC134921.2| Homo sapiens BAC clone RP11-597F18 from 4, comple... 40 8.4
39dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
40dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
41dbj|AP006332.2| Homo sapiens genomic DNA, chromosome Un clone:CM... 40 8.4
42dbj|AP006225.1| Homo sapiens genomic DNA, chromosome Un, clone:C... 40 8.4
43gb|AC122343.4| Mus musculus BAC clone RP23-359L18 from chromosom... 40 8.4
44gb|AC125159.4| Mus musculus BAC clone RP24-394C23 from 6, comple... 40 8.4 
>ref|XM_470454.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2474

 Score =  109 bits (55), Expect = 1e-20
 Identities = 136/163 (83%)
 Strand = Plus / Plus

                                                                        
Query: 53   caatgctttttgctgccatctccacaaaagttcctcgttctgacatggacataatccatg 112
            |||||||||||||||| || ||| | ||||| || ||||| ||||||||  |  | ||| 
Sbjct: 1937 caatgctttttgctgctatttccgctaaagtaccccgttcggacatggatctggtgcata 1996

                                                                        
Query: 113  gacactatgaagaattcaagaggagaaagataagcaggcccgattttgtgagacggctaa 172
             | | ||||||||||||||||||||||||||||||||||| ||  | ||||  | ||| |
Sbjct: 1997 aatattatgaagaattcaagaggagaaagataagcaggcctgacctagtgaagcagctga 2056

                                                       
Query: 173  gacagattgtcggtgacaagctgctggtttctacagtagtgag 215
            |||||||||| |||||||||||  |||||||||||||||||||
Sbjct: 2057 gacagattgttggtgacaagcttttggtttctacagtagtgag 2099
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>dbj|AK072499.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E22, full
            insert sequence
          Length = 3913

 Score =  109 bits (55), Expect = 1e-20
 Identities = 136/163 (83%)
 Strand = Plus / Plus

                                                                        
Query: 53   caatgctttttgctgccatctccacaaaagttcctcgttctgacatggacataatccatg 112
            |||||||||||||||| || ||| | ||||| || ||||| ||||||||  |  | ||| 
Sbjct: 3395 caatgctttttgctgctatttccgctaaagtaccccgttcggacatggatctggtgcata 3454

                                                                        
Query: 113  gacactatgaagaattcaagaggagaaagataagcaggcccgattttgtgagacggctaa 172
             | | ||||||||||||||||||||||||||||||||||| ||  | ||||  | ||| |
Sbjct: 3455 aatattatgaagaattcaagaggagaaagataagcaggcctgacctagtgaagcagctga 3514

                                                       
Query: 173  gacagattgtcggtgacaagctgctggtttctacagtagtgag 215
            |||||||||| |||||||||||  |||||||||||||||||||
Sbjct: 3515 gacagattgttggtgacaagcttttggtttctacagtagtgag 3557
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>dbj|AK060748.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F11, full
            insert sequence
          Length = 2479

 Score =  109 bits (55), Expect = 1e-20
 Identities = 136/163 (83%)
 Strand = Plus / Plus

                                                                        
Query: 53   caatgctttttgctgccatctccacaaaagttcctcgttctgacatggacataatccatg 112
            |||||||||||||||| || ||| | ||||| || ||||| ||||||||  |  | ||| 
Sbjct: 1961 caatgctttttgctgctatttccgctaaagtaccccgttcggacatggatctggtgcata 2020

                                                                        
Query: 113  gacactatgaagaattcaagaggagaaagataagcaggcccgattttgtgagacggctaa 172
             | | ||||||||||||||||||||||||||||||||||| ||  | ||||  | ||| |
Sbjct: 2021 aatattatgaagaattcaagaggagaaagataagcaggcctgacctagtgaagcagctga 2080

                                                       
Query: 173  gacagattgtcggtgacaagctgctggtttctacagtagtgag 215
            |||||||||| |||||||||||  |||||||||||||||||||
Sbjct: 2081 gacagattgttggtgacaagcttttggtttctacagtagtgag 2123
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>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08
             map S15179S, complete sequence
          Length = 166005

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                         
Query: 131   agaggagaaagataagcaggcccgattttgtgagacggctaagacagattgtcggtgaca 190
             |||||||||||||||||||||| ||  | ||||  | ||| ||||||||||| |||||||
Sbjct: 96578 agaggagaaagataagcaggcctgacctagtgaagcagctgagacagattgttggtgaca 96519

                                      
Query: 191   agctgctggtttctacagtagtgag 215
             ||||  |||||||||||||||||||
Sbjct: 96518 agcttttggtttctacagtagtgag 96494



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 53    caatgctttttgctgccatctccacaaaagttcctcgttctgacatgga 101
             |||||||||||||||| || ||| | ||||| || ||||| ||||||||
Sbjct: 96747 caatgctttttgctgctatttccgctaaagtaccccgttcggacatgga 96699
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                            
Query: 131      agaggagaaagataagcaggcccgattttgtgagacggctaagacagattgtcggtgaca 190
                |||||||||||||||||||||| ||  | ||||  | ||| ||||||||||| |||||||
Sbjct: 35698800 agaggagaaagataagcaggcctgacctagtgaagcagctgagacagattgttggtgaca 35698741

                                         
Query: 191      agctgctggtttctacagtagtgag 215
                ||||  |||||||||||||||||||
Sbjct: 35698740 agcttttggtttctacagtagtgag 35698716



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                 
Query: 53       caatgctttttgctgccatctccacaaaagttcctcgttctgacatgga 101
                |||||||||||||||| || ||| | ||||| || ||||| ||||||||
Sbjct: 35698969 caatgctttttgctgctatttccgctaaagtaccccgttcggacatgga 35698921
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                            
Query: 131      agaggagaaagataagcaggcccgattttgtgagacggctaagacagattgtcggtgaca 190
                |||||||||||||||||||||| ||  | ||||  | ||| ||||||||||| |||||||
Sbjct: 35788873 agaggagaaagataagcaggcctgacctagtgaagcagctgagacagattgttggtgaca 35788814

                                         
Query: 191      agctgctggtttctacagtagtgag 215
                ||||  |||||||||||||||||||
Sbjct: 35788813 agcttttggtttctacagtagtgag 35788789



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                 
Query: 53       caatgctttttgctgccatctccacaaaagttcctcgttctgacatgga 101
                |||||||||||||||| || ||| | ||||| || ||||| ||||||||
Sbjct: 35789042 caatgctttttgctgctatttccgctaaagtaccccgttcggacatgga 35788994
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>dbj|AB089269.1| Triticum aestivum D31 mRNA for fructan exohydrolase, complete cds
          Length = 2319

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 161  tgagacggctaagacagattgtcggtgacaagctgctggtttctacagta 210
            |||||| || |||| |||| || || ||||||||||||||||||||||||
Sbjct: 2296 tgagacagccaagaaagatcgttggcgacaagctgctggtttctacagta 2247
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>gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-434O14, complete
             sequence
          Length = 191358

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 124   gaattcaagaggagaaagata 144
             |||||||||||||||||||||
Sbjct: 23249 gaattcaagaggagaaagata 23229
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>gb|AC100708.10| Mus musculus chromosome 10, clone RP23-169I18, complete sequence
          Length = 196776

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 440  tggtgtagctttgtttggttc 460
            |||||||||||||||||||||
Sbjct: 8438 tggtgtagctttgtttggttc 8458
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>gb|AC108724.4| Homo sapiens 3 BAC RP11-413E6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 186773

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 345   ggagacggagagcacaaggac 365
             |||||||||||||||||||||
Sbjct: 61178 ggagacggagagcacaaggac 61158
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>gb|AC138773.5| Homo sapiens BAC clone RP11-1320L20 from UL, complete sequence
          Length = 191144

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 345    ggagacggagagcacaaggac 365
              |||||||||||||||||||||
Sbjct: 142665 ggagacggagagcacaaggac 142645
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>gb|AC132265.4| Mus musculus BAC clone RP24-373J20 from chromosome 10, complete
             sequence
          Length = 178780

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 440   tggtgtagctttgtttggttc 460
             |||||||||||||||||||||
Sbjct: 53390 tggtgtagctttgtttggttc 53370
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>emb|AL592170.21| Human DNA sequence from clone RP11-298A19 on chromosome 22, complete
             sequence
          Length = 186861

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 345   ggagacggagagcacaaggac 365
             |||||||||||||||||||||
Sbjct: 61390 ggagacggagagcacaaggac 61370
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>gb|AY109834.1| Zea mays CL7866_1 mRNA sequence
          Length = 1353

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 116 actatgaagaattcaagagga 136
           |||||||||||||||||||||
Sbjct: 464 actatgaagaattcaagagga 444
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>ref|XM_418865.1| PREDICTED: Gallus gallus similar to DERP13 (dermal papilla derived
           protein 13) (LOC420768), mRNA
          Length = 2102

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 tatgaagaattcaagaggag 137
           ||||||||||||||||||||
Sbjct: 938 tatgaagaattcaagaggag 957
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>gb|AC144385.2| Pan troglodytes BAC clone CH251-23H14 from X, complete sequence
          Length = 126566

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 574   atttgttcttttaattttga 593
             ||||||||||||||||||||
Sbjct: 13347 atttgttcttttaattttga 13366
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>gb|AC147070.5| Homo sapiens chromosome 4 clone RP13-1008F15, complete sequence
          Length = 153296

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 574    atttgttcttttaattttga 593
              ||||||||||||||||||||
Sbjct: 107171 atttgttcttttaattttga 107190
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>gb|AC147055.2| Homo sapiens BAC clone RP11-1267H10 from 4, complete sequence
          Length = 184963

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 574   atttgttcttttaattttga 593
             ||||||||||||||||||||
Sbjct: 60070 atttgttcttttaattttga 60051
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>gb|AC123037.4| Mus musculus BAC clone RP24-527F14 from chromosome 6, complete sequence
          Length = 137122

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 571    tagatttgttcttttaattt 590
              ||||||||||||||||||||
Sbjct: 127604 tagatttgttcttttaattt 127623
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>gb|AC126032.4| Mus musculus BAC clone RP24-94B12 from chromosome 1, complete sequence
          Length = 207475

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    caagctgctggtttctacag 208
              ||||||||||||||||||||
Sbjct: 133760 caagctgctggtttctacag 133779
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>emb|CR854849.7| Human DNA sequence from clone RP13-79M23 on chromosome 1, complete
             sequence
          Length = 153012

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 574   atttgttcttttaattttga 593
             ||||||||||||||||||||
Sbjct: 65716 atttgttcttttaattttga 65735
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>emb|AL611962.6| Human DNA sequence from clone RP11-45J16 on chromosome 1 Contains a
             pseudogene similar to flavin-containing monooxygenase
             proteins and the gene for a novel protein similar to
             flavin-containing monoxygenase proteins, complete sequence
          Length = 83051

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 574   atttgttcttttaattttga 593
             ||||||||||||||||||||
Sbjct: 40522 atttgttcttttaattttga 40541
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>emb|AL603890.14| Human DNA sequence from clone RP11-584P2 on chromosome 1 Contains the
             3' end of a novel gene  similar to preferentially
             expressed antigen in melanoma (PRAME), two novel proteins
             similar to preferentially expressed antigen in melanoma
             (PRAME), a novel gene and a CpG island, complete sequence
          Length = 88806

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 574   atttgttcttttaattttga 593
             ||||||||||||||||||||
Sbjct: 64566 atttgttcttttaattttga 64547
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>emb|AL583825.8| Human DNA sequence from clone RP11-362H12 on chromosome 1 Contains a
             mitochondrial intermediate peptidase (MIPEP) pseudogene
             and a CpG island, complete sequence
          Length = 198794

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 574   atttgttcttttaattttga 593
             ||||||||||||||||||||
Sbjct: 93305 atttgttcttttaattttga 93324
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>emb|AL445468.8| Human DNA sequence from clone RP11-74P14 on chromosome 1 Contains part
             of the SMYD3 gene for SET and MYND domain containing 3 and
             two CpG islands, complete sequence
          Length = 179503

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   aattcaagaggagaaagata 144
             ||||||||||||||||||||
Sbjct: 57246 aattcaagaggagaaagata 57227
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>emb|AL365443.16| Human DNA sequence from clone RP11-219C24 on chromosome 1 Contains six
             novel genes similar to preferentially expressed antigen in
             melanoma (PRAME), two novel genes, two preferentially
             expressed antigen in melanoma (PRAME) pseudogenes and a
             CpG island, complete sequence
          Length = 184591

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 574   atttgttcttttaattttga 593
             ||||||||||||||||||||
Sbjct: 90598 atttgttcttttaattttga 90617
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>emb|AL157712.14| Human DNA sequence from clone RP11-339B9 on chromosome 10 Contains two
             CpG islands, complete sequence
          Length = 131112

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 574   atttgttcttttaattttga 593
             ||||||||||||||||||||
Sbjct: 14862 atttgttcttttaattttga 14843
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>emb|AL035086.12|HS44A20 Human DNA sequence from clone RP1-44A20 on chromosome 6q23.1-24.3
             Contains part of the gene for a novel protein similar to
             C1-tetrahydrofolate synthases (contains DKFZP586G1517
             protein and FLJ21145, contains a tetrahydrofolate
             dehydrogenase/cyclohydrolase domain), part of a novel gene
             (contains FLJ31738 and KIAA1209) and a novel pseudogene
             similar to phosducin-like proteins. Contains a CpG island,
             complete sequence
          Length = 165090

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 574   atttgttcttttaattttga 593
             ||||||||||||||||||||
Sbjct: 63213 atttgttcttttaattttga 63232
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>emb|BX927375.6| Zebrafish DNA sequence from clone CH211-258B24 in linkage group 1,
             complete sequence
          Length = 53738

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 579   ttcttttaattttgagctga 598
             ||||||||||||||||||||
Sbjct: 14847 ttcttttaattttgagctga 14828
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>gb|AC112175.2| Homo sapiens chromosome 5 clone CTD-2568P10, complete sequence
          Length = 142712

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 574   atttgttcttttaattttga 593
             ||||||||||||||||||||
Sbjct: 38137 atttgttcttttaattttga 38118
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 243     ggcaggtgctgaactgctac 262
               ||||||||||||||||||||
Sbjct: 9660524 ggcaggtgctgaactgctac 9660543
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 243      ggcaggtgctgaactgctac 262
                ||||||||||||||||||||
Sbjct: 21886678 ggcaggtgctgaactgctac 21886697
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>gb|AC126281.3| Homo sapiens cosmid clone XXcos-2173C8 from 4, complete sequence
          Length = 39686

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 574   atttgttcttttaattttga 593
             ||||||||||||||||||||
Sbjct: 39287 atttgttcttttaattttga 39306
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>gb|AC145688.4| Pan troglodytes BAC clone CH251-346A10 from chromosome x, complete
              sequence
          Length = 174819

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 574    atttgttcttttaattttga 593
              ||||||||||||||||||||
Sbjct: 135129 atttgttcttttaattttga 135148
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>gb|AF328509.1|AF328509 Homo sapiens clone 4qtel_2173c8t3 sequence
          Length = 835

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 574 atttgttcttttaattttga 593
           ||||||||||||||||||||
Sbjct: 373 atttgttcttttaattttga 354
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>gb|AF277315.6| Homo sapiens chromosome X clone RP5-865E18, RP5-1087L19 map q28,
             complete sequence
          Length = 147234

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 574   atttgttcttttaattttga 593
             ||||||||||||||||||||
Sbjct: 90468 atttgttcttttaattttga 90487
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>gb|AC016696.8| Homo sapiens BAC clone RP11-130P22 from 2, complete sequence
          Length = 109431

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 575   tttgttcttttaattttgag 594
             ||||||||||||||||||||
Sbjct: 40666 tttgttcttttaattttgag 40647
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>gb|AC134921.2| Homo sapiens BAC clone RP11-597F18 from 4, complete sequence
          Length = 96776

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 574   atttgttcttttaattttga 593
             ||||||||||||||||||||
Sbjct: 68072 atttgttcttttaattttga 68053
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>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0706E03
          Length = 188028

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    ggcaggtgctgaactgctac 262
              ||||||||||||||||||||
Sbjct: 100621 ggcaggtgctgaactgctac 100640
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>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0041B22
          Length = 142446

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    ggcaggtgctgaactgctac 262
              ||||||||||||||||||||
Sbjct: 100354 ggcaggtgctgaactgctac 100373
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>dbj|AP006332.2| Homo sapiens genomic DNA, chromosome Un clone:CMF9-56D23, telomere
             region, complete sequence
          Length = 32289

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 574   atttgttcttttaattttga 593
             ||||||||||||||||||||
Sbjct: 15478 atttgttcttttaattttga 15459
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>dbj|AP006225.1| Homo sapiens genomic DNA, chromosome Un, clone:CMF-39K16, telomere
             region, complete sequence
          Length = 28943

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 574   atttgttcttttaattttga 593
             ||||||||||||||||||||
Sbjct: 19438 atttgttcttttaattttga 19457
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>gb|AC122343.4| Mus musculus BAC clone RP23-359L18 from chromosome 7, complete sequence
          Length = 228892

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 490   ttagtaactggaaacactct 509
             ||||||||||||||||||||
Sbjct: 96764 ttagtaactggaaacactct 96745
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>gb|AC125159.4| Mus musculus BAC clone RP24-394C23 from 6, complete sequence
          Length = 190966

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 571   tagatttgttcttttaattt 590
             ||||||||||||||||||||
Sbjct: 36261 tagatttgttcttttaattt 36280


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,508,766
Number of Sequences: 3902068
Number of extensions: 5508766
Number of successful extensions: 121414
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121246
Number of HSP's gapped (non-prelim): 162
length of query: 615
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 592
effective length of database: 17,143,297,704
effective search space: 10148832240768
effective search space used: 10148832240768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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