ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd25e02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1100 bits (555), Expect = 0.0 Identities = 567/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 120052 gcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 119994 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119993 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 119934 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119933 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 119874 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119873 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 119814 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119813 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 119754 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 119753 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 119694 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119693 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 119634 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119633 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 119574 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119573 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 119514 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 119513 aagtgatctctgaccgcgtgcctgttgaag 119484 Score = 1100 bits (555), Expect = 0.0 Identities = 567/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 94842 gcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 94900 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94901 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 94960 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94961 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 95020 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95021 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 95080 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95081 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 95140 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 95141 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 95200 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95201 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 95260 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95261 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 95320 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95321 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 95380 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 95381 aagtgatctctgaccgcgtgcctgttgaag 95410
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1092 bits (551), Expect = 0.0 Identities = 566/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 963 gcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 905 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 904 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 845 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 844 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 785 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 725 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 665 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 664 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 605 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 604 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 545 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 485 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 425 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 424 aagtgatctctgaccgcgtgcctgttgaag 395
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1092 bits (551), Expect = 0.0 Identities = 566/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 44877 gcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 44819 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 44818 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 44759 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44758 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 44699 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44698 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 44639 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44638 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 44579 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 44578 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 44519 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44518 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 44459 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44458 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 44399 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44398 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 44339 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 44338 aagtgatctctgaccgcgtgcctgttgaag 44309 Score = 1092 bits (551), Expect = 0.0 Identities = 566/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 20241 gcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 20299 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 20300 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 20359 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20360 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 20419 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20420 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 20479 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20480 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 20539 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 20540 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 20599 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20600 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 20659 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20660 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 20719 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20720 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 20779 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 20780 aagtgatctctgaccgcgtgcctgttgaag 20809
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1092 bits (551), Expect = 0.0 Identities = 566/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 1506 gcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 1448 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1447 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 1388 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1387 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 1328 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1327 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 1268 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1267 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 1208 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1207 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 1148 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1147 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 1088 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 1028 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1027 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 968 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 967 aagtgatctctgaccgcgtgcctgttgaag 938
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1092 bits (551), Expect = 0.0 Identities = 566/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 123716 gcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 123658 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 123657 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 123598 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123597 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 123538 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123537 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 123478 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123477 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 123418 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 123417 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 123358 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123357 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 123298 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123297 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 123238 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123237 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 123178 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 123177 aagtgatctctgaccgcgtgcctgttgaag 123148 Score = 1092 bits (551), Expect = 0.0 Identities = 566/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 99121 gcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 99179 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 99180 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 99239 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99240 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 99299 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99300 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 99359 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99360 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 99419 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 99420 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 99479 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99480 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 99539 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99540 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 99599 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99600 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 99659 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 99660 aagtgatctctgaccgcgtgcctgttgaag 99689
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1092 bits (551), Expect = 0.0 Identities = 566/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 124433 gcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 124375 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 124374 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 124315 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124314 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 124255 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124254 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 124195 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124194 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 124135 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 124134 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 124075 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124074 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 124015 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124014 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 123955 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123954 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 123895 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 123894 aagtgatctctgaccgcgtgcctgttgaag 123865 Score = 1092 bits (551), Expect = 0.0 Identities = 566/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 99798 gcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 99856 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 99857 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 99916 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99917 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 99976 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99977 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 100036 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100037 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 100096 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 100097 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 100156 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100157 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 100216 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100217 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 100276 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100277 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 100336 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 100337 aagtgatctctgaccgcgtgcctgttgaag 100366
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 118833 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 118775 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 118774 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 118715 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118714 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 118655 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118654 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 118595 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118594 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 118535 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 118534 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 118475 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118474 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 118415 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118414 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 118355 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118354 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 118295 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 118294 aagtgatctctgaccgcgtgcctgttgaag 118265
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 119917 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 119859 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 119858 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 119799 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119798 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 119739 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119738 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 119679 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119678 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 119619 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 119618 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 119559 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119558 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 119499 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119498 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 119439 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119438 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 119379 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 119378 aagtgatctctgaccgcgtgcctgttgaag 119349 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 95239 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 95297 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 95298 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 95357 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95358 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 95417 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95418 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 95477 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95478 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 95537 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 95538 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 95597 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95598 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 95657 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95658 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 95717 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95718 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 95777 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 95778 aagtgatctctgaccgcgtgcctgttgaag 95807
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 119917 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 119859 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 119858 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 119799 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119798 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 119739 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119738 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 119679 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119678 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 119619 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 119618 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 119559 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119558 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 119499 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119498 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 119439 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119438 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 119379 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 119378 aagtgatctctgaccgcgtgcctgttgaag 119349 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 95239 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 95297 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 95298 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 95357 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95358 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 95417 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95418 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 95477 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95478 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 95537 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 95538 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 95597 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95598 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 95657 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95658 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 95717 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95718 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 95777 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 95778 aagtgatctctgaccgcgtgcctgttgaag 95807
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 119866 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 119808 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 119807 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 119748 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119747 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 119688 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119687 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 119628 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119627 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 119568 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 119567 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 119508 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119507 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 119448 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119447 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 119388 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119387 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 119328 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 119327 aagtgatctctgaccgcgtgcctgttgaag 119298 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 95184 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 95242 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 95243 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 95302 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95303 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 95362 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95363 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 95422 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95423 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 95482 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 95483 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 95542 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95543 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 95602 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95603 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 95662 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95663 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 95722 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 95723 aagtgatctctgaccgcgtgcctgttgaag 95752
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 31507817 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 31507875 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 31507876 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 31507935 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507936 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 31507995 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507996 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 31508055 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508056 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 31508115 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 31508116 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 31508175 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508176 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 31508235 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508236 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 31508295 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508296 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 31508355 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 31508356 aagtgatctctgaccgcgtgcctgttgaag 31508385
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 84779 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 84721 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 84720 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 84661 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84660 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 84601 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84600 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 84541 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84540 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 84481 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 84480 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 84421 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84420 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 84361 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84360 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 84301 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84300 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 84241 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 84240 aagtgatctctgaccgcgtgcctgttgaag 84211
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 119886 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 119828 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 119827 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 119768 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119767 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 119708 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119707 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 119648 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119647 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 119588 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 119587 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 119528 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119527 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 119468 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119467 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 119408 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119407 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 119348 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 119347 aagtgatctctgaccgcgtgcctgttgaag 119318 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 95232 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 95290 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 95291 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 95350 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95351 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 95410 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95411 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 95470 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95471 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 95530 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 95531 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 95590 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95591 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 95650 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95651 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 95710 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95711 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 95770 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 95771 aagtgatctctgaccgcgtgcctgttgaag 95800
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 122281 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 122339 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 122340 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 122399 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122400 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 122459 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122460 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 122519 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122520 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 122579 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 122580 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 122639 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122640 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 122699 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 122759 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 122819 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 122820 aagtgatctctgaccgcgtgcctgttgaag 122849 Score = 1076 bits (543), Expect = 0.0 Identities = 564/570 (98%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 14006 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 14064 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 14065 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 14124 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14125 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 14184 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14185 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 14244 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14245 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 14304 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 14305 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 14364 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 14365 acccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaagg 14424 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14425 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 14484 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14485 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 14544 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 14545 aagtgatctctgaccgcgtgcctgttgaag 14574
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 58605 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 58547 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 58546 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 58487 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58486 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 58427 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58426 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 58367 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58366 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 58307 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 58306 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 58247 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58246 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 58187 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58186 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 58127 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58126 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 58067 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 58066 aagtgatctctgaccgcgtgcctgttgaag 58037
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 9268166 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 9268224 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9268225 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 9268284 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268285 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 9268344 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268345 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 9268404 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268405 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 9268464 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9268465 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 9268524 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268525 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 9268584 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268585 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 9268644 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268645 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 9268704 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 9268705 aagtgatctctgaccgcgtgcctgttgaag 9268734 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 9227666 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 9227724 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9227725 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 9227784 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227785 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 9227844 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227845 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 9227904 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227905 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 9227964 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9227965 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 9228024 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228025 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 9228084 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228085 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 9228144 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228145 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 9228204 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 9228205 aagtgatctctgaccgcgtgcctgttgaag 9228234 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 9164255 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 9164313 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9164314 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 9164373 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164374 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 9164433 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164434 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 9164493 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164494 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 9164553 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9164554 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 9164613 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164614 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 9164673 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164674 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 9164733 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164734 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 9164793 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 9164794 aagtgatctctgaccgcgtgcctgttgaag 9164823 Score = 1076 bits (543), Expect = 0.0 Identities = 564/570 (98%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 9056080 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 9056138 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9056139 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 9056198 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056199 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 9056258 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056259 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 9056318 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056319 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 9056378 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9056379 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 9056438 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 9056439 acccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaagg 9056498 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056499 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 9056558 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056559 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 9056618 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 9056619 aagtgatctctgaccgcgtgcctgttgaag 9056648 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 437 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 496 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 497 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 19938151 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 19938209 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 19938210 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 19938269 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938270 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 19938329 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938330 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 19938389 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938390 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 19938449 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 19938450 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 19938509 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938510 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 19938569 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938570 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 19938629 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938630 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 19938689 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 19938690 aagtgatctctgaccgcgtgcctgttgaag 19938719 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 10277280 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 10277222 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10277221 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 10277162 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277161 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 10277102 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277101 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 10277042 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277041 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 10276982 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10276981 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 10276922 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276921 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 10276862 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276861 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 10276802 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276801 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 10276742 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 10276741 aagtgatctctgaccgcgtgcctgttgaag 10276712 Score = 1076 bits (543), Expect = 0.0 Identities = 564/570 (98%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 10387018 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 10387076 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10387077 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 10387136 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387137 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 10387196 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387197 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 10387256 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387257 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 10387316 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10387317 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 10387376 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387377 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 10387436 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10387437 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacc 10387496 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387497 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 10387556 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 10387557 aagtgatctctgaccgcgtgcctgttgaag 10387586 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 455 agtaccgtgagggaaaggtgaaaagaacccc 485 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 280 ttgtgctgctaggcgaagcggttgagtgc 308 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 31598333 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 31598391 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 31598392 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 31598451 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598452 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 31598511 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598512 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 31598571 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598572 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 31598631 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 31598632 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 31598691 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598692 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 31598751 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598752 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 31598811 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598812 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 31598871 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 31598872 aagtgatctctgaccgcgtgcctgttgaag 31598901
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 33525649 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 33525707 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 33525708 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 33525767 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525768 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 33525827 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525828 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 33525887 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525888 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 33525947 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 33525948 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 33526007 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526008 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 33526067 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526068 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 33526127 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526128 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 33526187 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 33526188 aagtgatctctgaccgcgtgcctgttgaag 33526217 Score = 212 bits (107), Expect = 9e-52 Identities = 113/115 (98%) Strand = Plus / Minus Query: 459 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 518 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 519 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 573 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 16677987 Score = 176 bits (89), Expect = 5e-41 Identities = 98/101 (97%) Strand = Plus / Minus Query: 473 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 532 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 533 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 32744672 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 439 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 439 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 466 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 504 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 30 acgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||| ||||| ||||||||||||||||||||| Sbjct: 19455163 acgaggtagggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 47892 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 47834 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 47833 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 47774 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47773 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 47714 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47713 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 47654 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47653 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 47594 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 47593 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 47534 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47533 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 47474 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47473 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 47414 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47413 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 47354 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 47353 aagtgatctctgaccgcgtgcctgttgaag 47324
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 70846 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 70904 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 70905 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 70964 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70965 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 71024 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71025 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 71084 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71085 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 71144 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 71145 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 71204 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71205 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 71264 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71265 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 71324 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71325 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 71384 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 71385 aagtgatctctgaccgcgtgcctgttgaag 71414 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 439 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 439 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 18 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 76 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 77 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 136 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 196 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 256 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 316 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 317 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 376 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 436 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 496 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 556 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 557 aagtgatctctgaccgcgtgcctgttgaag 586
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 15 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 73 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 74 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 133 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 193 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 253 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 313 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 314 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 373 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 433 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 493 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 494 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 553 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 554 aagtgatctctgaccgcgtgcctgttgaag 583
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 19949427 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 19949485 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 19949486 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 19949545 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949546 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 19949605 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949606 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 19949665 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949666 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 19949725 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 19949726 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 19949785 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949786 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 19949845 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949846 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 19949905 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949906 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 19949965 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 19949966 aagtgatctctgaccgcgtgcctgttgaag 19949995 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 10283319 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 10283261 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10283260 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 10283201 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283200 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 10283141 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283140 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 10283081 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283080 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 10283021 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10283020 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 10282961 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282960 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 10282901 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282900 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 10282841 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282840 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 10282781 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 10282780 aagtgatctctgaccgcgtgcctgttgaag 10282751 Score = 1076 bits (543), Expect = 0.0 Identities = 564/570 (98%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 10393057 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 10393115 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10393116 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 10393175 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393176 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 10393235 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393236 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 10393295 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393296 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 10393355 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10393356 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 10393415 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393416 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 10393475 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10393476 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacc 10393535 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393536 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 10393595 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 10393596 aagtgatctctgaccgcgtgcctgttgaag 10393625 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 439 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 280 ttgtgctgctaggcgaagcggttgagtgc 308 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 119860 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 119802 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 119801 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 119742 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119741 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 119682 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119681 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 119622 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119621 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 119562 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 119561 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 119502 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119501 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 119442 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119441 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 119382 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119381 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 119322 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 119321 aagtgatctctgaccgcgtgcctgttgaag 119292 Score = 1084 bits (547), Expect = 0.0 Identities = 565/570 (99%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 95179 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 95237 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 95238 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 95297 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95298 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 95357 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95358 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 95417 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95418 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 95477 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 95478 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 95537 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95538 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 95597 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95598 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 95657 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95658 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 95717 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 95718 aagtgatctctgaccgcgtgcctgttgaag 95747
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1076 bits (543), Expect = 0.0 Identities = 564/570 (98%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 140814 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 140872 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 140873 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 140932 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140933 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 140992 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140993 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 141052 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141053 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 141112 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 141113 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 141172 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 141173 acccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaagg 141232 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141233 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 141292 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141293 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 141352 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 141353 aagtgatctctgaccgcgtgcctgttgaag 141382
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1076 bits (543), Expect = 0.0 Identities = 564/570 (98%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 93410 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 93468 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 93469 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 93528 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93529 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 93588 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93589 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 93648 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93649 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 93708 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 93709 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 93768 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93769 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 93828 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 93829 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacc 93888 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93889 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 93948 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 93949 aagtgatctctgaccgcgtgcctgttgaag 93978
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1076 bits (543), Expect = 0.0 Identities = 564/570 (98%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 27474 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 27532 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 27533 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 27592 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27593 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 27652 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27653 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 27712 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27713 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 27772 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 27773 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 27832 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27833 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 27892 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 27893 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacc 27952 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27953 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 28012 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 28013 aagtgatctctgaccgcgtgcctgttgaag 28042
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1076 bits (543), Expect = 0.0 Identities = 564/570 (98%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 9242115 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 9242057 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9242056 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 9241997 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241996 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 9241937 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9241936 aggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaa 9241877 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241876 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 9241817 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9241816 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 9241757 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241756 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 9241697 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241696 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 9241637 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241636 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 9241577 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 9241576 aagtgatctctgaccgcgtgcctgttgaag 9241547 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 162 actgaaacatcttagtagccagaggaaaagaaag 195 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1076 bits (543), Expect = 0.0 Identities = 564/570 (98%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 53328 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 53270 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 53269 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 53210 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53209 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 53150 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 53149 aggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaa 53090 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53089 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 53030 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 53029 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 52970 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52969 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 52910 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52909 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 52850 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52849 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 52790 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||| Sbjct: 52789 aagtgatctctgaccgcgtgcctgttgaag 52760
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1045 bits (527), Expect = 0.0 Identities = 539/543 (99%) Strand = Plus / Plus Query: 31 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 Query: 91 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 150 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 120 Query: 151 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 Query: 211 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 Query: 271 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 330 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 Query: 331 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 390 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 301 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 360 Query: 391 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 Query: 451 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 Query: 511 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 570 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 481 aaccgtgctgagctcccaagcagtgggaggggaaattgatctctgaccgcgtgcctgttg 540 Query: 571 aag 573 ||| Sbjct: 541 aag 543
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1031 bits (520), Expect = 0.0 Identities = 561/571 (98%), Gaps = 3/571 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgctt 62 ||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||| Sbjct: 123656 gcggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgctt 123598 Query: 63 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 123597 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 123538 Query: 123 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 182 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123537 cctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 123478 Query: 183 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123477 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 123418 Query: 243 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 302 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 123417 accgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggtt 123358 Query: 303 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 362 ||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||| Sbjct: 123357 gagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctct 123299 Query: 363 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123298 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 123239 Query: 423 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123238 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 123179 Query: 483 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123178 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 123119 Query: 543 aaagtgatctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||||||||||| Sbjct: 123118 aaagtgatctctgaccgcgtgcctgttgaag 123088 Score = 1031 bits (520), Expect = 0.0 Identities = 561/571 (98%), Gaps = 3/571 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgctt 62 ||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||| Sbjct: 99081 gcggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgctt 99139 Query: 63 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 99140 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 99199 Query: 123 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 182 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99200 cctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 99259 Query: 183 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99260 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 99319 Query: 243 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 302 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 99320 accgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggtt 99379 Query: 303 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 362 ||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||| Sbjct: 99380 gagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctct 99438 Query: 363 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99439 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 99498 Query: 423 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99499 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 99558 Query: 483 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99559 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 99618 Query: 543 aaagtgatctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||||||||||| Sbjct: 99619 aaagtgatctctgaccgcgtgcctgttgaag 99649
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1031 bits (520), Expect = 0.0 Identities = 561/571 (98%), Gaps = 3/571 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgctt 62 ||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||| Sbjct: 5434 gcggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgctt 5492 Query: 63 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5493 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 5552 Query: 123 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 182 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5553 cctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 5612 Query: 183 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5613 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 5672 Query: 243 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 302 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 5673 accgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggtt 5732 Query: 303 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 362 ||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||| Sbjct: 5733 gagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctct 5791 Query: 363 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5792 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 5851 Query: 423 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5852 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 5911 Query: 483 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5912 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 5971 Query: 543 aaagtgatctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||||||||||| Sbjct: 5972 aaagtgatctctgaccgcgtgcctgttgaag 6002
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1031 bits (520), Expect = 0.0 Identities = 561/571 (98%), Gaps = 3/571 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgctt 62 ||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||| Sbjct: 22 gcggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgctt 80 Query: 63 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 81 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 140 Query: 123 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 182 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 cctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 200 Query: 183 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 260 Query: 243 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 302 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 261 accgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggtt 320 Query: 303 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 362 ||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||| Sbjct: 321 gagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctct 379 Query: 363 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 439 Query: 423 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 499 Query: 483 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 500 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 559 Query: 543 aaagtgatctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||||||||||| Sbjct: 560 aaagtgatctctgaccgcgtgcctgttgaag 590
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 961 bits (485), Expect = 0.0 Identities = 491/493 (99%) Strand = Plus / Plus Query: 81 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 140 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 141 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 201 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 261 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 321 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 380 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 381 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 441 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 420 Query: 501 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 480 Query: 561 gtgcctgttgaag 573 ||||||||||||| Sbjct: 481 gtgcctgttgaag 493
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 946 bits (477), Expect = 0.0 Identities = 486/489 (99%) Strand = Plus / Plus Query: 85 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 144 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 145 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 205 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 265 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 325 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 384 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 385 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 445 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 505 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 480 Query: 565 ctgttgaag 573 ||||||||| Sbjct: 481 ctgttgaag 489
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 944 bits (476), Expect = 0.0 Identities = 494/499 (98%), Gaps = 1/499 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 19 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 77 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 78 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 137 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 197 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 257 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 317 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 318 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 377 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 437 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 484 cccagtgggtagtgaaata 502 ||||||||||||||||||| Sbjct: 498 cccagtgggtagtgaaata 516
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 912 bits (460), Expect = 0.0 Identities = 544/569 (95%), Gaps = 5/569 (0%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 139565 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 139507 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 139506 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 139448 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139447 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 139388 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139387 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 139328 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 139327 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 139268 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 || | |||||||||||||| | |||||||||||||||||||||||| ||||| ||||||| Sbjct: 139267 gtactgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctctga 139208 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139207 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 139148 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139147 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 139088 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 139087 ccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa 139031 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||||||| Sbjct: 139030 tttgatctctgaccgcgtgcctgttgaag 139002 Score = 912 bits (460), Expect = 0.0 Identities = 544/569 (95%), Gaps = 5/569 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 110380 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 110438 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 110439 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 110497 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110498 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 110557 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110558 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 110617 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 110618 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 110677 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 || | |||||||||||||| | |||||||||||||||||||||||| ||||| ||||||| Sbjct: 110678 gtactgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctctga 110737 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110738 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 110797 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110798 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 110857 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 110858 ccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa 110914 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||||||| Sbjct: 110915 tttgatctctgaccgcgtgcctgttgaag 110943
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 912 bits (460), Expect = 0.0 Identities = 544/569 (95%), Gaps = 5/569 (0%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 127843 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 127785 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 127784 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 127726 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127725 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 127666 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 127665 ggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaac 127606 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 127605 cgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtgga 127546 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 |||| |||||||||||||| | |||||||||||||||| ||||||||||||| ||||||| Sbjct: 127545 gtgctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctctga 127486 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127485 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 127426 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 127366 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 127365 ccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa 127309 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||| Sbjct: 127308 tgtgatctctgaccgcgtgcctgttgaag 127280 Score = 912 bits (460), Expect = 0.0 Identities = 544/569 (95%), Gaps = 5/569 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 107079 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 107137 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 107138 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 107196 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107197 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 107256 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107257 ggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaac 107316 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 107317 cgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtgga 107376 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 |||| |||||||||||||| | |||||||||||||||| ||||||||||||| ||||||| Sbjct: 107377 gtgctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctctga 107436 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107437 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 107496 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107497 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 107556 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 107557 ccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa 107613 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||| Sbjct: 107614 tgtgatctctgaccgcgtgcctgttgaag 107642
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 912 bits (460), Expect = 0.0 Identities = 544/569 (95%), Gaps = 5/569 (0%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 134202 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 134144 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 134143 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 134085 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134084 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 134025 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134024 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 133965 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 133964 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgga 133905 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 133904 atgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 133845 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133844 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 133785 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133784 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 133725 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 133724 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaa 133668 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||| Sbjct: 133667 tgtgatctctgaccgcgtgcctgttgaag 133639 Score = 912 bits (460), Expect = 0.0 Identities = 544/569 (95%), Gaps = 5/569 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 103769 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 103827 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 103828 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 103886 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103887 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 103946 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103947 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 104006 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 104007 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgga 104066 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 104067 atgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 104126 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104127 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 104186 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104187 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 104246 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 104247 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaa 104303 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||| Sbjct: 104304 tgtgatctctgaccgcgtgcctgttgaag 104332
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 896 bits (452), Expect = 0.0 Identities = 542/569 (95%), Gaps = 5/569 (0%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 142087 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 142029 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| Sbjct: 142028 gggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc- 141970 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141969 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 141910 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141909 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 141850 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 141849 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttga 141790 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 || | |||||||||||||| | ||||||||| |||||||||||||| ||||| ||||||| Sbjct: 141789 gtactgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctga 141730 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 141729 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 141670 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141669 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 141610 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 141609 ccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa 141553 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||||||| Sbjct: 141552 tttgatctctgaccgcgtgcctgttgaag 141524 Score = 896 bits (452), Expect = 0.0 Identities = 542/569 (95%), Gaps = 5/569 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 111570 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 111628 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| Sbjct: 111629 gggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc- 111687 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111688 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 111747 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111748 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 111807 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 111808 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttga 111867 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 || | |||||||||||||| | ||||||||| |||||||||||||| ||||| ||||||| Sbjct: 111868 gtactgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctga 111927 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 111928 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 111987 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111988 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 112047 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 112048 ccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa 112104 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||||||| Sbjct: 112105 tttgatctctgaccgcgtgcctgttgaag 112133
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 896 bits (452), Expect = 0.0 Identities = 455/456 (99%) Strand = Plus / Plus Query: 118 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 178 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 238 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 298 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 357 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 358 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 418 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 478 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 538 aggggaaagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaag 456
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 886 bits (447), Expect = 0.0 Identities = 541/569 (95%), Gaps = 9/569 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 134960 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 134902 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 134901 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 134843 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134842 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 134783 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134782 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 134723 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 134722 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgga 134663 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 |||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||| | Sbjct: 134662 gtgctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttctaa 134603 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134602 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 134543 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134542 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 134483 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 134482 ccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa 134426 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||||| Sbjct: 134425 ----atctctgaccgcgtgcctgttgaag 134401 Score = 886 bits (447), Expect = 0.0 Identities = 541/569 (95%), Gaps = 9/569 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 105322 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 105380 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 105381 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 105439 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105440 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 105499 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105500 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 105559 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 105560 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgga 105619 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 |||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||| | Sbjct: 105620 gtgctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttctaa 105679 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105680 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 105739 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105740 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 105799 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 105800 ccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa 105856 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||||| Sbjct: 105857 ----atctctgaccgcgtgcctgttgaag 105881
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 882 bits (445), Expect = 0.0 Identities = 541/569 (95%), Gaps = 7/569 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 136570 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 136512 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 136511 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc- 136453 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136452 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 136393 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136392 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 136333 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 136332 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 136273 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 |||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 136272 gtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 136213 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136212 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 136153 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 136152 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 136093 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 136092 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 136036 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 136035 aggg--ctctgaccgcgtgcctgttgaag 136009 Score = 882 bits (445), Expect = 0.0 Identities = 541/569 (95%), Gaps = 7/569 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 105855 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 105913 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 105914 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc- 105972 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105973 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 106032 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106033 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 106092 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 106093 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 106152 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 |||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 106153 gtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 106212 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106213 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106272 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106273 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 106332 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106333 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 106389 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 106390 aggg--ctctgaccgcgtgcctgttgaag 106416
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 864 bits (436), Expect = 0.0 Identities = 539/569 (94%), Gaps = 6/569 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 132754 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 132696 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 132695 gggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc- 132637 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132636 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 132577 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132576 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 132517 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 132516 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtaga 132457 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 132456 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 132397 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132396 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 132337 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 132336 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 132277 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 132276 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 132220 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 132219 cg-gggctctgaccgcgtgcctgttgaag 132192 Score = 864 bits (436), Expect = 0.0 Identities = 539/569 (94%), Gaps = 6/569 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 104124 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 104182 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 104183 gggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc- 104241 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104242 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 104301 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104302 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 104361 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 104362 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtaga 104421 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104422 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 104481 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104482 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 104541 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 104542 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 104601 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104602 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 104658 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 104659 cg-gggctctgaccgcgtgcctgttgaag 104686
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 864 bits (436), Expect = 0.0 Identities = 539/569 (94%), Gaps = 6/569 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 132977 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 132919 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 132918 gggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc- 132860 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132859 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 132800 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132799 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 132740 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 132739 cgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgga 132680 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 132679 gtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctga 132620 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132619 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 132560 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 132559 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 132500 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 132499 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-c 132444 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 || ||||||||||||||||||||||| Sbjct: 132443 cctgggctctgaccgcgtgcctgttgaag 132415 Score = 864 bits (436), Expect = 0.0 Identities = 539/569 (94%), Gaps = 6/569 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 103787 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 103845 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 103846 gggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc- 103904 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103905 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 103964 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103965 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 104024 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 104025 cgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgga 104084 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 104085 gtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctga 104144 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104145 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 104204 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 104205 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 104264 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104265 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-c 104320 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 || ||||||||||||||||||||||| Sbjct: 104321 cctgggctctgaccgcgtgcctgttgaag 104349
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 864 bits (436), Expect = 0.0 Identities = 539/569 (94%), Gaps = 6/569 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 132747 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 132689 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 132688 gggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc- 132630 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132629 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 132570 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132569 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 132510 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 132509 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtaga 132450 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 132449 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 132390 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132389 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 132330 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 132329 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 132270 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 132269 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 132213 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 132212 cg-gggctctgaccgcgtgcctgttgaag 132185 Score = 864 bits (436), Expect = 0.0 Identities = 539/569 (94%), Gaps = 6/569 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 104122 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 104180 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 104181 gggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc- 104239 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104240 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 104299 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104300 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 104359 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 104360 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtaga 104419 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104420 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 104479 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104480 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 104539 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 104540 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 104599 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104600 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 104656 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 104657 cg-gggctctgaccgcgtgcctgttgaag 104684
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 856 bits (432), Expect = 0.0 Identities = 538/569 (94%), Gaps = 6/569 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 131646 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 131588 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 131587 gggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc- 131529 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131528 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 131469 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131468 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 131409 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 131408 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtaga 131349 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 131348 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 131289 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131288 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 131229 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 131228 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 131169 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 131168 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 131112 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 131111 cg-gggctctgaccgcgtgcctgttgaag 131084 Score = 856 bits (432), Expect = 0.0 Identities = 538/569 (94%), Gaps = 6/569 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 102989 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 103047 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 103048 gggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc- 103106 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103107 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 103166 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103167 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 103226 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 103227 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtaga 103286 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 103287 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 103346 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103347 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 103406 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 103407 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 103466 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 103467 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 103523 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 103524 cg-gggctctgaccgcgtgcctgttgaag 103551
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 856 bits (432), Expect = 0.0 Identities = 538/569 (94%), Gaps = 6/569 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 133938 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 133880 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 133879 gggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc- 133821 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133820 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 133761 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133760 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 133701 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 ||||||||||||||||||||||||||| | |||||| |||||||||||||||||||| || Sbjct: 133700 cgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtgga 133641 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 133640 gtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctga 133581 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133580 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 133521 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 133520 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 133461 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 133460 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-c 133405 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 || ||||||||||||||||||||||| Sbjct: 133404 cctgggctctgaccgcgtgcctgttgaag 133376 Score = 856 bits (432), Expect = 0.0 Identities = 538/569 (94%), Gaps = 6/569 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 104711 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 104769 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 104770 gggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc- 104828 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104829 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 104888 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104889 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 104948 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 ||||||||||||||||||||||||||| | |||||| |||||||||||||||||||| || Sbjct: 104949 cgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtgga 105008 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 105009 gtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctga 105068 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105069 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 105128 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 105129 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 105188 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 105189 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-c 105244 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 || ||||||||||||||||||||||| Sbjct: 105245 cctgggctctgaccgcgtgcctgttgaag 105273
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 848 bits (428), Expect = 0.0 Identities = 537/569 (94%), Gaps = 6/569 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 140339 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 140281 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 140280 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 140222 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140221 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 140162 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140161 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 140102 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 140101 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcgga 140042 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 140041 atgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 139982 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139981 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 139922 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 139921 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 139862 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | || ||||||||||||||||| | | Sbjct: 139861 ccatcggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-a 139806 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 139805 cgggggctctgaccgcgtgcctgttgaag 139777 Score = 848 bits (428), Expect = 0.0 Identities = 537/569 (94%), Gaps = 6/569 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 109721 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 109779 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 109780 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 109838 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109839 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 109898 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109899 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 109958 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 109959 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcgga 110018 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 110019 atgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 110078 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110079 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 110138 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 110139 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 110198 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | || ||||||||||||||||| | | Sbjct: 110199 ccatcggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-a 110254 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 110255 cgggggctctgaccgcgtgcctgttgaag 110283
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 848 bits (428), Expect = 0.0 Identities = 537/569 (94%), Gaps = 6/569 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 20 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 78 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 79 gggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc- 137 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 197 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 257 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 ||||||||||||||||||||||||||| | |||||| |||||||||||||||||||| || Sbjct: 258 cgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtgga 317 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 ||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 318 gtgccgcaccctagatggcgagagtccagtagccgagagcatcactagcttatgctctga 377 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 497 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-c 553 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 || ||||||||||||||||||||||| Sbjct: 554 cctgggctctgaccgcgtgcctgttgaag 582
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 848 bits (428), Expect = 0.0 Identities = 537/569 (94%), Gaps = 6/569 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 29 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 87 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 88 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 146 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 147 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccaga 206 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 266 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 267 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgga 326 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 |||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 327 gtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 386 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 446 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 447 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 506 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 507 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 563 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 564 cg-gggctctgaccgcgtgcctgttgaag 591
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 844 bits (426), Expect = 0.0 Identities = 510/535 (95%), Gaps = 5/535 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | ||||||| |||||||| ||||||||||||||||||| Sbjct: 130513 ggtggatacctaggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcgg 130455 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | | Sbjct: 130454 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-t 130396 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130395 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 130336 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130335 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 130276 Query: 246 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 305 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| Sbjct: 130275 gtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggag 130216 Query: 306 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 365 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 130215 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 130156 Query: 366 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130155 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 130096 Query: 426 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 130095 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccc 130036 Query: 486 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 130035 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 844 bits (426), Expect = 0.0 Identities = 510/535 (95%), Gaps = 5/535 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | ||||||| |||||||| ||||||||||||||||||| Sbjct: 101943 ggtggatacctaggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcgg 102001 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | | Sbjct: 102002 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-t 102060 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102061 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 102120 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102121 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 102180 Query: 246 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 305 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| Sbjct: 102181 gtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggag 102240 Query: 306 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 365 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 102241 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 102300 Query: 366 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102301 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 102360 Query: 426 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 102361 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccc 102420 Query: 486 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 102421 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 102472 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 551 ctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaag 129947 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 551 ctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaag 102509
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 841 bits (424), Expect = 0.0 Identities = 535/569 (94%), Gaps = 5/569 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 22 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 80 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||| ||||||||||||||||||||||||||||| ||| ||| |||||||| |||||| Sbjct: 81 gggagctgaaaataagcatagatccggagattcccgaatgggttaaccttttgaactgc- 139 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 199 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 200 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaac 259 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 ||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| Sbjct: 260 cgtgaaaacggggttgtgggagagcaatataagtgttgtgttgctaggcgaagcggttga 319 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 || |||||||| |||||| | |||||||||||||||||||||||||||||| ||||| | Sbjct: 320 gtcccgcaccccagatggtgagagtccagtagccgaaagcatcactagcttacgctctaa 379 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 439 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 499 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 500 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaa 556 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||| Sbjct: 557 tcggatctctgaccgcgtgcctgttgaag 585
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 839 bits (423), Expect = 0.0 Identities = 510/536 (95%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 29 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 87 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 88 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 146 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 147 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccaga 206 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 266 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 267 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 326 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 |||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 327 gtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 386 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 446 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 447 taaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaaccc 506 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 540 ||| ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 507 ccatcggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 839 bits (423), Expect = 0.0 Identities = 510/536 (95%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 29 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 87 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 88 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 146 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 147 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccaga 206 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 266 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 267 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 326 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 |||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 327 gtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 386 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 446 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 447 taaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaaccc 506 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 540 ||| || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 507 ccatccgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 837 bits (422), Expect = 0.0 Identities = 537/570 (94%), Gaps = 8/570 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 136279 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 136221 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 136220 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 136162 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136161 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 136102 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136101 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 136042 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttg 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 136041 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccg 135982 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 135981 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 135922 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135921 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 135862 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135861 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 135802 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135801 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135745 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 135744 caggg--ctctgaccgcgtgcctgttgaag 135717 Score = 837 bits (422), Expect = 0.0 Identities = 537/570 (94%), Gaps = 8/570 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 106351 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 106409 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 106410 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 106468 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106469 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 106528 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106529 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 106588 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttg 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 106589 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccg 106648 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 106649 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 106708 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106709 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 106768 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106769 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 106828 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106829 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106885 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 106886 caggg--ctctgaccgcgtgcctgttgaag 106913
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 837 bits (422), Expect = 0.0 Identities = 537/570 (94%), Gaps = 8/570 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 136917 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 136859 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 136858 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 136800 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136799 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 136740 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136739 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 136680 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 136679 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 136620 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 136619 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 136560 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136559 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 136500 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 136499 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 136440 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 136439 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 136383 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 136382 caggg--ctctgaccgcgtgcctgttgaag 136355 Score = 837 bits (422), Expect = 0.0 Identities = 537/570 (94%), Gaps = 8/570 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 106640 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 106698 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 106699 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 106757 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106758 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 106817 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106818 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 106877 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 106878 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 106937 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 106938 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 106997 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106998 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 107057 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107058 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 107117 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 107118 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 107174 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 107175 caggg--ctctgaccgcgtgcctgttgaag 107202
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 837 bits (422), Expect = 0.0 Identities = 537/570 (94%), Gaps = 8/570 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 1545 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 1603 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 1604 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 1662 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1663 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 1722 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1723 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 1782 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttg 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 1783 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccg 1842 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1843 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 1902 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1903 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 1962 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1963 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 2022 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 2023 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 2079 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 2080 caggg--ctctgaccgcgtgcctgttgaag 2107
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 837 bits (422), Expect = 0.0 Identities = 537/570 (94%), Gaps = 8/570 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 135525 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 135467 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 135466 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 135408 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135407 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 135348 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135347 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 135288 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 135287 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 135228 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 135227 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 135168 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135167 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 135108 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135107 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 135048 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135047 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 134991 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 134990 caggg--ctctgaccgcgtgcctgttgaag 134963 Score = 837 bits (422), Expect = 0.0 Identities = 537/570 (94%), Gaps = 8/570 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 105511 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 105569 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 105570 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 105628 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105629 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 105688 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105689 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 105748 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 105749 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 105808 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 105809 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 105868 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105869 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 105928 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105929 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 105988 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 105989 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106045 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 106046 caggg--ctctgaccgcgtgcctgttgaag 106073
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 837 bits (422), Expect = 0.0 Identities = 537/570 (94%), Gaps = 8/570 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 135660 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 135602 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 135601 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 135543 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135542 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 135483 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135482 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 135423 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 135422 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 135363 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 135362 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 135303 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135302 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 135243 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135242 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 135183 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135182 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135126 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 135125 caggg--ctctgaccgcgtgcctgttgaag 135098 Score = 837 bits (422), Expect = 0.0 Identities = 537/570 (94%), Gaps = 8/570 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 105683 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 105741 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 105742 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 105800 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105801 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 105860 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105861 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 105920 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 105921 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 105980 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 105981 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 106040 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106041 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 106100 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106101 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 106160 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106161 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106217 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 106218 caggg--ctctgaccgcgtgcctgttgaag 106245
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 837 bits (422), Expect = 0.0 Identities = 537/570 (94%), Gaps = 8/570 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 135658 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 135600 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 135599 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 135541 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135540 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 135481 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135480 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 135421 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 135420 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 135361 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 135360 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 135301 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135300 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 135241 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135240 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 135181 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135180 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135124 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 135123 caggg--ctctgaccgcgtgcctgttgaag 135096 Score = 837 bits (422), Expect = 0.0 Identities = 537/570 (94%), Gaps = 8/570 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 105680 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 105738 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 105739 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 105797 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105798 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 105857 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105858 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 105917 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 105918 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 105977 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 105978 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 106037 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106038 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 106097 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106098 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 106157 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106158 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106214 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 106215 caggg--ctctgaccgcgtgcctgttgaag 106242
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 837 bits (422), Expect = 0.0 Identities = 537/570 (94%), Gaps = 8/570 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 135570 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 135512 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 135511 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 135453 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135452 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 135393 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135392 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 135333 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 135332 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 135273 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 135272 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 135213 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135212 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 135153 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135152 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 135093 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135092 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135036 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 135035 caggg--ctctgaccgcgtgcctgttgaag 135008 Score = 837 bits (422), Expect = 0.0 Identities = 537/570 (94%), Gaps = 8/570 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 105558 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 105616 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 105617 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 105675 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105676 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 105735 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105736 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 105795 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 105796 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 105855 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 105856 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 105915 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105916 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 105975 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105976 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 106035 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106036 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106092 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 106093 caggg--ctctgaccgcgtgcctgttgaag 106120
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 837 bits (422), Expect = 0.0 Identities = 537/570 (94%), Gaps = 8/570 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 136277 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 136219 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 136218 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 136160 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136159 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 136100 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136099 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 136040 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttg 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 136039 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccg 135980 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 135979 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 135920 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135919 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 135860 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135859 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 135800 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135799 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135743 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 135742 caggg--ctctgaccgcgtgcctgttgaag 135715 Score = 837 bits (422), Expect = 0.0 Identities = 537/570 (94%), Gaps = 8/570 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 106349 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 106407 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 106408 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 106466 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106467 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 106526 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106527 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 106586 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttg 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 106587 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccg 106646 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 106647 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 106706 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106707 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 106766 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106767 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 106826 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106827 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106883 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 106884 caggg--ctctgaccgcgtgcctgttgaag 106911
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 837 bits (422), Expect = 0.0 Identities = 537/570 (94%), Gaps = 8/570 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 135537 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 135479 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 135478 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 135420 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135419 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 135360 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135359 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 135300 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 135299 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 135240 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 135239 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 135180 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135179 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 135120 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135119 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 135060 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135059 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135003 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 135002 caggg--ctctgaccgcgtgcctgttgaag 134975 Score = 837 bits (422), Expect = 0.0 Identities = 537/570 (94%), Gaps = 8/570 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 105525 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 105583 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 105584 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 105642 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105643 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 105702 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105703 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 105762 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 105763 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 105822 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 105823 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 105882 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105883 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 105942 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105943 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 106002 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106003 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106059 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 106060 caggg--ctctgaccgcgtgcctgttgaag 106087
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 833 bits (420), Expect = 0.0 Identities = 535/569 (94%), Gaps = 6/569 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 106026 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 106084 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 |||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 106085 gggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 106143 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106144 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 106203 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106204 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 106263 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 106264 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgga 106323 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 106324 gtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 106383 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106384 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106443 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 106444 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccc 106503 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | | Sbjct: 106504 ccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-a 106559 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 106560 cgaggactctgaccgcgtgcctgttgaag 106588 Score = 783 bits (395), Expect = 0.0 Identities = 534/572 (93%), Gaps = 9/572 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 135883 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 135825 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 |||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 135824 gggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 135766 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135765 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 135706 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135705 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 135646 Query: 245 cgtgaaaacggggttgtgggagagc-aatacaagcgttgtgctgctaggcgaagcggttg 303 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || | Sbjct: 135645 cgtgaaaacggggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagtgg 135586 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg-ctct 362 |||| |||||||||||||| | |||||||||||||||||||||||||||||| | | || Sbjct: 135585 agtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgcccct 135526 Query: 363 gacccgagtagcatggggcacgtggaatcccgtgtgaatcag-caaggaccaccttgcaa 421 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135525 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagccaaggaccaccttgcaa 135466 Query: 422 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 481 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 135465 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaa 135406 Query: 482 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 541 |||||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| Sbjct: 135405 cccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggagga 135349 Query: 542 gaaagtgatctctgaccgcgtgcctgttgaag 573 | | | | ||||||||||||||||||||||| Sbjct: 135348 g-acgaggactctgaccgcgtgcctgttgaag 135318
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 833 bits (420), Expect = 0.0 Identities = 535/569 (94%), Gaps = 6/569 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 136159 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 136101 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 |||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 136100 gggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 136042 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136041 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 135982 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135981 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 135922 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 135921 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgga 135862 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 135861 gtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 135802 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135801 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135742 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 135741 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccc 135682 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | | Sbjct: 135681 ccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-a 135626 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 135625 cgaggactctgaccgcgtgcctgttgaag 135597 Score = 833 bits (420), Expect = 0.0 Identities = 535/569 (94%), Gaps = 6/569 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 106248 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 106306 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 |||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 106307 gggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 106365 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106366 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 106425 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106426 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 106485 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 106486 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgga 106545 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 106546 gtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 106605 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106606 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106665 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 106666 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccc 106725 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | | Sbjct: 106726 ccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-a 106781 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 106782 cgaggactctgaccgcgtgcctgttgaag 106810
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 831 bits (419), Expect = 0.0 Identities = 509/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 29 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 87 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 88 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 146 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 147 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccaga 206 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 266 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 267 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 326 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 |||| |||||||||||||| | ||||||||||||||||||||| |||||||| ||||||| Sbjct: 327 gtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctga 386 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 446 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 447 taaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaaccc 506 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 540 ||| || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 507 ccatccgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 831 bits (419), Expect = 0.0 Identities = 509/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 29 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 87 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 88 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 146 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 147 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccaga 206 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 266 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 267 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 326 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 |||| |||||||||||||| | ||||||||||||||||||||| |||||||| ||||||| Sbjct: 327 gtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctga 386 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 446 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 447 taaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaaccc 506 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 540 ||| ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 507 ccatcggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 831 bits (419), Expect = 0.0 Identities = 509/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 29 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 87 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||| ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 88 gggggttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 146 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 147 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccaga 206 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 266 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 267 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 326 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 |||| |||||||||||||| | ||||||||||||||||||||| |||||||| ||||||| Sbjct: 327 gtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctga 386 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 446 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 447 taaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaaccc 506 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 540 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 507 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 829 bits (418), Expect = 0.0 Identities = 508/535 (94%), Gaps = 5/535 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||| |||||||||| || |||||||||||||||| Sbjct: 46274 ggtggatacctaggcacccagag-acgaagaagggcgtattaatcgacgaaatgcttcgg 46332 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 46333 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 46391 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 46392 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccagag 46451 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 46452 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 46511 Query: 246 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 305 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 46512 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 46571 Query: 306 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 365 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 46572 taccgcaccctagatggctagagtccagtagccgaaagcatcactagcttatgctctgac 46631 Query: 366 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46632 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 46691 Query: 426 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 46692 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 46751 Query: 486 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 540 || ||| ||||||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 46752 catcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagg 46803 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 551 ctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaag 46840
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 829 bits (418), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 73 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 132 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 133 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 193 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 253 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 313 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 372 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 373 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 433 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420 Query: 493 tagtga 498 |||||| Sbjct: 421 tagtga 426
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 829 bits (418), Expect = 0.0 Identities = 536/570 (94%), Gaps = 8/570 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 136008 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 135950 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||| Sbjct: 135949 gggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc- 135891 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135890 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 135831 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135830 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 135771 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttg 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 135770 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccg 135711 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 135710 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 135651 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135650 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 135591 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135590 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 135531 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135530 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135474 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 135473 caggg--ctctgaccgcgtgcctgttgaag 135446 Score = 829 bits (418), Expect = 0.0 Identities = 536/570 (94%), Gaps = 8/570 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 106130 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 106188 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||| Sbjct: 106189 gggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc- 106247 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106248 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 106307 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106308 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 106367 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttg 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 106368 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccg 106427 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 106428 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 106487 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106488 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 106547 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106548 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 106607 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106608 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106664 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 106665 caggg--ctctgaccgcgtgcctgttgaag 106692
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 827 bits (417), Expect = 0.0 Identities = 536/570 (94%), Gaps = 7/570 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 21 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 79 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 80 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 138 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 139 tgctgaatccatgggcaggcaagagacaacctaacgaactgaaacatcttagtagccaga 198 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagc-ggcgagcgaaatgggagcagcctaaa 243 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 199 ggaaaagaaagcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcagcctaaa 258 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 259 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtga 318 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 319 agtgccgaaccctagatggctagagtccagtagccgaaagcatcactagcttacgctctg 378 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 438 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 439 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacc 498 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 499 cccaccggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 555 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 556 ctg-gggctctgaccgcgtgcctgttgaag 584
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 817 bits (412), Expect = 0.0 Identities = 533/569 (93%), Gaps = 6/569 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||| Sbjct: 131770 cggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcg 131712 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 |||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | Sbjct: 131711 gggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc- 131653 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131652 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 131593 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131592 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 131533 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||| | || || Sbjct: 131532 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtgga 131473 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 |||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 131472 gtgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctga 131413 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 131353 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 131352 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 131293 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | ||||| |||||||||||||||| | Sbjct: 131292 ccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggggga 131236 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||| Sbjct: 131235 ccaga-ccctgaccgcgtgcctgttgaag 131208 Score = 817 bits (412), Expect = 0.0 Identities = 533/569 (93%), Gaps = 6/569 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||| Sbjct: 101675 cggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcg 101733 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 |||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | Sbjct: 101734 gggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc- 101792 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101793 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 101852 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101853 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 101912 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||| | || || Sbjct: 101913 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtgga 101972 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 |||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 101973 gtgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctga 102032 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102033 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 102092 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 102093 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 102152 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | ||||| |||||||||||||||| | Sbjct: 102153 ccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggggga 102209 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||| Sbjct: 102210 ccaga-ccctgaccgcgtgcctgttgaag 102237
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 815 bits (411), Expect = 0.0 Identities = 507/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 139483 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 139425 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 139424 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc- 139366 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 139365 tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccgga 139306 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139305 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 139246 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| | Sbjct: 139245 cgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaa 139186 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 |||||| |||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 139185 gtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctga 139126 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139125 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 139066 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 139065 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 139006 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 139005 ccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 138953 Score = 815 bits (411), Expect = 0.0 Identities = 507/536 (94%), Gaps = 5/536 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 109614 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 109672 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 109673 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc- 109731 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 109732 tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccgga 109791 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109792 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 109851 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| | Sbjct: 109852 cgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaa 109911 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 |||||| |||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 109912 gtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctga 109971 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109972 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 110031 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 110032 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 110091 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 110092 ccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 110144
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 809 bits (408), Expect = 0.0 Identities = 535/572 (93%), Gaps = 8/572 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 139692 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 139634 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 139633 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc- 139575 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139574 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 139515 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139514 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 139455 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-g 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 139454 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcg 139395 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| ||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 139394 aatgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctg 139335 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139334 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 139275 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 139274 ctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacc 139215 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| || Sbjct: 139214 cccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggaga 139158 Query: 544 --aagtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 139157 ctactaggactctgaccgcgtgcctgttgaag 139126 Score = 809 bits (408), Expect = 0.0 Identities = 535/572 (93%), Gaps = 8/572 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 109607 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 109665 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 109666 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc- 109724 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109725 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 109784 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109785 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 109844 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-g 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 109845 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcg 109904 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| ||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 109905 aatgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctg 109964 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109965 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 110024 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 110025 ctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacc 110084 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| || Sbjct: 110085 cccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggaga 110141 Query: 544 --aagtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 110142 ctactaggactctgaccgcgtgcctgttgaag 110173
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 807 bits (407), Expect = 0.0 Identities = 505/535 (94%), Gaps = 5/535 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 71 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 129 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 130 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 188 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 189 gctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggag 248 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 308 Query: 246 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 305 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 309 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaag 368 Query: 306 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 365 ||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 369 tgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgac 428 Query: 366 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 488 Query: 426 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 489 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 548 Query: 486 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 540 | ||| ||||||||||||| |||||||| | ||||||||||||| |||||| Sbjct: 549 cgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagngggagg 600
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 803 bits (405), Expect = 0.0 Identities = 530/565 (93%), Gaps = 9/565 (1%) Strand = Plus / Plus Query: 10 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 69 ||||||||||||||||| | |||||||||||||||| || |||||||||||||||||||| Sbjct: 1 gatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggag 59 Query: 70 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 129 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 60 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 118 Query: 130 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 189 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 178 Query: 190 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 238 Query: 250 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 308 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 239 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 298 Query: 309 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 368 |||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 299 tgcaccc-atatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 357 Query: 369 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 Query: 429 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 488 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 477 Query: 489 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 548 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 478 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 534 Query: 549 atctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||| Sbjct: 535 --ctctgaccgcgtgcctgttgaag 557
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 791 bits (399), Expect = 0.0 Identities = 531/571 (92%), Gaps = 7/571 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||| | |||||||||||||||||| Sbjct: 86283 cggtggatacctaggcacccagag-acgaggaagggcgtggtaagcgacgaaatgcttcg 86341 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||| ||||||||||||||||||||| ||||||| |||| ||| |||||| Sbjct: 86342 gggagttgaaaatgagcatagatccggagattcccgaataggttaacccttttaactgc- 86400 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86401 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 86460 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 86461 ggaatagaaagcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaaac 86520 Query: 245 cgtgaaaacggggttgtgggagagc--aatacaagcgttgtgctgctaggcgaagcggtt 302 ||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||| Sbjct: 86521 cgtgaaaacggggttgtgggagagcccaatataagctctgtgctgctaggcgaagcggtt 86580 Query: 303 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 362 |||| | ||||||||||||| | |||||||||||||||||||||| | ||||| ||||| Sbjct: 86581 gagtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctct 86640 Query: 363 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86641 aacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 86700 Query: 423 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86701 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 86760 Query: 483 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 542 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 86761 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaa 86817 Query: 543 aaagtgatctctgaccgcgtgcctgttgaag 573 || |||||||||||||||||||||||||| Sbjct: 86818 aattagatctctgaccgcgtgcctgttgaag 86848
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 791 bits (399), Expect = 0.0 Identities = 531/571 (92%), Gaps = 7/571 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||| | |||||||||||||||||| Sbjct: 88369 cggtggatacctaggcacccagag-acgaggaagggcgtggtaagcgacgaaatgcttcg 88427 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||| ||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 88428 gggagttgaaaattagcatagatccggagattcccgaataggttaacctttttcactgc- 88486 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 88487 tgctgaatccatgggcaggcaagagacaacctggtgaactgaaacatcttagtagccaga 88546 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88547 ggaatagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 88606 Query: 245 cgtgaaaacggggttgtgggagagca--atacaagcgttgtgctgctaggcgaagcggtt 302 |||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||| Sbjct: 88607 cgtgaaaacggggttgtgggagagcacaatataagctctgtgctgctaggcgaagcggtt 88666 Query: 303 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 362 |||| | ||||||||||||| | |||||||||||||||||||||| | ||||| ||||| Sbjct: 88667 gagtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctct 88726 Query: 363 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88727 aacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 88786 Query: 423 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88787 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 88846 Query: 483 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 542 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 88847 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaa 88903 Query: 543 aaagtgatctctgaccgcgtgcctgttgaag 573 || |||||||||||||||||||||||||| Sbjct: 88904 aattagatctctgaccgcgtgcctgttgaag 88934
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 785 bits (396), Expect = 0.0 Identities = 528/568 (92%), Gaps = 7/568 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 4253 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 4311 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 4312 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 4370 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4371 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 4430 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4431 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 4490 Query: 246 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 305 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | || Sbjct: 4491 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaa 4550 Query: 306 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 365 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4551 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 4610 Query: 366 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4611 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 4670 Query: 426 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4671 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 4730 Query: 486 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 545 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 4731 tgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctg 4787 Query: 546 gtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 4788 ggg--ctctgaccgcgtgcctgttgaag 4813
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 785 bits (396), Expect = 0.0 Identities = 528/568 (92%), Gaps = 7/568 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 23672 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 23614 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 23613 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 23555 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23554 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 23495 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 23494 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 23435 Query: 246 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 305 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | || Sbjct: 23434 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaa 23375 Query: 306 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 365 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23374 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 23315 Query: 366 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23314 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 23255 Query: 426 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 23254 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 23195 Query: 486 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 545 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 23194 tgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctg 23138 Query: 546 gtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 23137 ggg--ctctgaccgcgtgcctgttgaag 23112
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 785 bits (396), Expect = 0.0 Identities = 529/568 (93%), Gaps = 8/568 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 4522 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 4580 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 4581 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 4639 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4640 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 4699 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4700 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 4759 Query: 246 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 305 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 4760 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaa 4819 Query: 306 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 365 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4820 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 4879 Query: 366 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 425 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4880 ccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggct 4939 Query: 426 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4940 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 4999 Query: 486 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 545 | ||| ||||||||||||| ||||||||| ||||||||| |||||||||| | Sbjct: 5000 tggcggggagtgaaatagaacatgaaaccgta---agctcccaa-cagtgggaggagctg 5055 Query: 546 gtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 5056 ggg--ctctgaccgcgtgcctgttgaag 5081
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 785 bits (396), Expect = 0.0 Identities = 529/568 (93%), Gaps = 8/568 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 4522 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 4580 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 4581 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 4639 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4640 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 4699 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4700 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 4759 Query: 246 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 305 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 4760 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaa 4819 Query: 306 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 365 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4820 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 4879 Query: 366 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 425 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4880 ccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggct 4939 Query: 426 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4940 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 4999 Query: 486 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 545 | ||| ||||||||||||| ||||||||| ||||||||| |||||||||| | Sbjct: 5000 tggcggggagtgaaatagaacatgaaaccgta---agctcccaa-cagtgggaggagctg 5055 Query: 546 gtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 5056 ggg--ctctgaccgcgtgcctgttgaag 5081
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 779 bits (393), Expect = 0.0 Identities = 526/565 (93%), Gaps = 8/565 (1%) Strand = Plus / Minus Query: 10 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 69 ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| Sbjct: 142853 gatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggag 142795 Query: 70 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 129 |||||||||||| |||||||||||||||| ||| ||||||||||| |||||| ||||| Sbjct: 142794 ttgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctg 142736 Query: 130 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 189 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142735 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 142676 Query: 190 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142675 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 142616 Query: 250 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgc 308 ||||||||||||||||||| |||||||||| ||||||||||||||||| | || ||||| Sbjct: 142615 aaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgc 142556 Query: 309 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 368 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 142555 tgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccg 142496 Query: 369 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 142495 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 142436 Query: 429 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 488 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 142435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 142376 Query: 489 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 548 ||| ||||||||||||| |||||||| | ||||||||||||||||||| | || | Sbjct: 142375 cggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg 142319 Query: 549 atctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||| Sbjct: 142318 --ctctgaccgcgtgcctgttgaag 142296 Score = 779 bits (393), Expect = 0.0 Identities = 526/565 (93%), Gaps = 8/565 (1%) Strand = Plus / Plus Query: 10 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 69 ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| Sbjct: 110475 gatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggag 110533 Query: 70 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 129 |||||||||||| |||||||||||||||| ||| ||||||||||| |||||| ||||| Sbjct: 110534 ttgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctg 110592 Query: 130 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 189 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110593 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 110652 Query: 190 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110653 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 110712 Query: 250 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgc 308 ||||||||||||||||||| |||||||||| ||||||||||||||||| | || ||||| Sbjct: 110713 aaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgc 110772 Query: 309 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 368 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 110773 tgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccg 110832 Query: 369 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 110833 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 110892 Query: 429 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 488 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 110893 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 110952 Query: 489 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 548 ||| ||||||||||||| |||||||| | ||||||||||||||||||| | || | Sbjct: 110953 cggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg 111009 Query: 549 atctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||| Sbjct: 111010 --ctctgaccgcgtgcctgttgaag 111032
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 777 bits (392), Expect = 0.0 Identities = 534/572 (93%), Gaps = 11/572 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || | ||||||||||||| Sbjct: 1788 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatc-acgaaatgcttcg 1845 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 1846 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 1904 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1905 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaccatcttagtagccaga 1964 Query: 185 ggaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1965 ggaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 2024 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagc-gttgtgctgctaggcgaagc-ggt 301 ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| | Sbjct: 2025 ccgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagcagcc 2084 Query: 302 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 361 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2085 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 2144 Query: 362 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2145 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 2204 Query: 422 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 481 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2205 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 2264 Query: 482 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 541 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 2265 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 2321 Query: 542 gaaagtgatctctgaccgcgtgcctgttgaag 573 | || | ||||||||||||||||||||||| Sbjct: 2322 gccaggg--ctctgaccgcgtgcctgttgaag 2351
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 775 bits (391), Expect = 0.0 Identities = 529/570 (92%), Gaps = 9/570 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||| Sbjct: 517 cggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcg 575 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | Sbjct: 576 gggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc- 634 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 635 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 694 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 695 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 754 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||| | || || Sbjct: 755 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtgga 814 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 |||| | ||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 815 gtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctga 874 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 875 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 934 Query: 425 taaatactcctgggtgaccgatagcgaagtagta-ccgtgagggaaaggtgaaaagaacc 483 ||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| Sbjct: 935 taaatactcctgggtgaccgatagccaaatagtacccgtgagggaaaggtgaaaagaacc 994 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | ||||| |||||||||||||| || Sbjct: 995 cccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggaga 1051 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || ||||||||||||||||||||||| Sbjct: 1052 cag---gctctgaccgcgtgcctgttgaag 1078
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 771 bits (389), Expect = 0.0 Identities = 526/568 (92%), Gaps = 8/568 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||| Sbjct: 29 cggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcg 87 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | Sbjct: 88 gggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc- 146 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 206 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 266 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||| | || || Sbjct: 267 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtgga 326 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 |||| | ||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 327 gtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctga 386 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 446 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 447 taaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaaccc 506 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| || Sbjct: 507 ccatcggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagac 563 Query: 545 agtgatctctgaccgcgtgcctgttgaa 572 || |||||| ||||||||||||||| Sbjct: 564 ag---gctctgaacgcgtgcctgttgaa 588
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 763 bits (385), Expect = 0.0 Identities = 506/542 (93%), Gaps = 6/542 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||| Sbjct: 29 cggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcg 87 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | Sbjct: 88 gggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc- 146 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 206 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 266 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||||||||||||||||||| ||||||||||||||| | || || Sbjct: 267 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtgga 326 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 |||| | ||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 327 gtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctga 386 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 446 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 447 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-cc 505 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| ||| Sbjct: 506 ccatcggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagaa 562 Query: 545 ag 546 || Sbjct: 563 ag 564
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 763 bits (385), Expect = 0.0 Identities = 531/571 (92%), Gaps = 13/571 (2%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||| Sbjct: 121 cggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcg 179 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 180 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 238 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt-agccag 183 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 239 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtgagccag 298 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 358 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag-cggtt 302 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| || Sbjct: 359 ccgtgaaaacggg-ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagacgccc 417 Query: 303 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 362 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 418 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 477 Query: 363 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 422 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 478 gacccgagtagcatggggcacgtggaatcccgtgtgaatcgacaaggaccaccttgcaag 537 Query: 423 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 482 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 538 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 597 Query: 483 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 542 ||| | ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 598 ccc-atcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggcc 653 Query: 543 aaagtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 654 aggg----ctctgaccgcgtgcctgttgaag 680
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 761 bits (384), Expect = 0.0 Identities = 531/572 (92%), Gaps = 10/572 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 131849 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 131791 Query: 66 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 124 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 131790 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 131732 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 131731 tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccaga 131672 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131671 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 131612 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 131611 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 131552 Query: 305 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 362 | ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 131551 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 131492 Query: 363 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131491 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 131432 Query: 423 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 482 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 131431 gctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaac 131372 Query: 483 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-g 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 131371 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 131315 Query: 542 gaaagtgatctctgaccgcgtgcctgttgaag 573 | | || ||||||||||||||||||||||| Sbjct: 131314 gctcggga-ctctgaccgcgtgcctgttgaag 131284 Score = 761 bits (384), Expect = 0.0 Identities = 531/572 (92%), Gaps = 10/572 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 103545 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 103603 Query: 66 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 124 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 103604 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 103662 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 103663 tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccaga 103722 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103723 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 103782 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 103783 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 103842 Query: 305 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 362 | ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 103843 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 103902 Query: 363 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103903 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 103962 Query: 423 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 482 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 103963 gctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaac 104022 Query: 483 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-g 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104023 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 104079 Query: 542 gaaagtgatctctgaccgcgtgcctgttgaag 573 | | || ||||||||||||||||||||||| Sbjct: 104080 gctcggga-ctctgaccgcgtgcctgttgaag 104110
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 753 bits (380), Expect = 0.0 Identities = 525/569 (92%), Gaps = 6/569 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 116188 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 116130 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 116129 gggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc- 116071 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 116070 tgctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccaga 116011 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 116010 ggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaac 115951 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||| ||||||| |||| | | ||| |||||| ||||||||||||| ||||| Sbjct: 115950 cgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttga 115892 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 || | ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| | Sbjct: 115891 gtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaa 115832 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 115831 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 115772 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115771 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 115712 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 115711 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaa 115655 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||||| Sbjct: 115654 ttgaatctctgaccgcgtgcctgttgaag 115626 Score = 753 bits (380), Expect = 0.0 Identities = 525/569 (92%), Gaps = 6/569 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 85932 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 85990 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 85991 gggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc- 86049 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86050 tgctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccaga 86109 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 86110 ggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaac 86169 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||| ||||||| |||| | | ||| |||||| ||||||||||||| ||||| Sbjct: 86170 cgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttga 86228 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 || | ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| | Sbjct: 86229 gtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaa 86288 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 86289 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 86348 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86349 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 86408 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 86409 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaa 86465 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||||| Sbjct: 86466 ttgaatctctgaccgcgtgcctgttgaag 86494
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 751 bits (379), Expect = 0.0 Identities = 382/383 (99%) Strand = Plus / Plus Query: 191 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 251 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 311 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 370 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 371 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 431 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 491 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 551 ctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaag 383
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 749 bits (378), Expect = 0.0 Identities = 526/570 (92%), Gaps = 8/570 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||| |||| || ||||||||||||||| Sbjct: 52665 cggtggatacctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcg 52607 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| Sbjct: 52606 gggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc- 52548 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 52547 tgctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccaga 52488 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 52487 ggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaac 52428 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttg 303 || |||||||||||||||||||||||||| ||| || ||||||||||||||| | | ||| Sbjct: 52427 cgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttg 52368 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| |||||||||||||||||||||||| |||||| ||||||| Sbjct: 52367 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctg 52308 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52307 acccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 52248 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 52247 ctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacc 52188 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| |||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 52187 cccattggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 52131 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 52130 caggg--ctctgaccgcgtgcctgttgaag 52103 Score = 749 bits (378), Expect = 0.0 Identities = 526/570 (92%), Gaps = 8/570 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||| |||| || ||||||||||||||| Sbjct: 37163 cggtggatacctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcg 37221 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| Sbjct: 37222 gggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc- 37280 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 37281 tgctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccaga 37340 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 37341 ggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaac 37400 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttg 303 || |||||||||||||||||||||||||| ||| || ||||||||||||||| | | ||| Sbjct: 37401 cgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttg 37460 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| |||||||||||||||||||||||| |||||| ||||||| Sbjct: 37461 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctg 37520 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37521 acccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 37580 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 37581 ctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacc 37640 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| |||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 37641 cccattggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 37697 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 37698 caggg--ctctgaccgcgtgcctgttgaag 37725
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 749 bits (378), Expect = 0.0 Identities = 526/570 (92%), Gaps = 8/570 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||| |||| || ||||||||||||||| Sbjct: 4091 cggtggatacctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcg 4149 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| Sbjct: 4150 gggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc- 4208 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4209 tgctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccaga 4268 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 4269 ggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaac 4328 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttg 303 || |||||||||||||||||||||||||| ||| || ||||||||||||||| | | ||| Sbjct: 4329 cgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttg 4388 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | ||| |||||||||||||| |||||||||||||||||||||||| |||||| ||||||| Sbjct: 4389 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctg 4448 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4449 acccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 4508 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 4509 ctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacc 4568 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| |||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 4569 cccattggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 4625 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 4626 caggg--ctctgaccgcgtgcctgttgaag 4653
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 747 bits (377), Expect = 0.0 Identities = 380/381 (99%) Strand = Plus / Plus Query: 193 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 253 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 313 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 372 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 373 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 433 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 493 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 553 ctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaag 381
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 747 bits (377), Expect = 0.0 Identities = 380/381 (99%) Strand = Plus / Plus Query: 193 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 253 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 313 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 372 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 373 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 433 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 493 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 553 ctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaag 381
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 747 bits (377), Expect = 0.0 Identities = 526/573 (91%), Gaps = 11/573 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||| ||| | ||||||||||||||||||| ||||||||||||||| Sbjct: 128425 cggtggatacctaggcactcagag-acgaggaagggcgtagcaatcgacgaaatgcttcg 128367 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 128366 gggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactgc- 128308 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128307 tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 128248 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 ||||| ||||||||| ||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 128247 ggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaac 128188 Query: 245 cgtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagc 298 |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||| Sbjct: 128187 cgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagc 128128 Query: 299 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 358 |||||||| |||||||||||||||| | |||||||||||||||||||||||||||| | | Sbjct: 128127 ggttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacg 128068 Query: 359 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 418 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128067 ctctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 128008 Query: 419 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 478 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 128007 caaggctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaa 127948 Query: 479 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 538 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 127947 gaacccccataggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 127891 Query: 539 ggggaaagtgatctctgaccgcgtgcctgttga 571 || ||| ||||||||||||| |||||||||| Sbjct: 127890 ggagaattggatctctgaccgcatgcctgttga 127858 Score = 747 bits (377), Expect = 0.0 Identities = 526/573 (91%), Gaps = 11/573 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||| ||| | ||||||||||||||||||| ||||||||||||||| Sbjct: 95022 cggtggatacctaggcactcagag-acgaggaagggcgtagcaatcgacgaaatgcttcg 95080 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 95081 gggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactgc- 95139 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 95199 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 ||||| ||||||||| ||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 95200 ggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaac 95259 Query: 245 cgtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagc 298 |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||| Sbjct: 95260 cgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagc 95319 Query: 299 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 358 |||||||| |||||||||||||||| | |||||||||||||||||||||||||||| | | Sbjct: 95320 ggttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacg 95379 Query: 359 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 418 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95380 ctctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 95439 Query: 419 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 478 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 95440 caaggctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaa 95499 Query: 479 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 538 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 95500 gaacccccataggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 95556 Query: 539 ggggaaagtgatctctgaccgcgtgcctgttga 571 || ||| ||||||||||||| |||||||||| Sbjct: 95557 ggagaattggatctctgaccgcatgcctgttga 95589
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 745 bits (376), Expect = 0.0 Identities = 456/478 (95%), Gaps = 5/478 (1%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggga 68 |||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| Sbjct: 22 ggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgggga 80 Query: 69 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 128 ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||| Sbjct: 81 gttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgct 139 Query: 129 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 188 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 gaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 199 Query: 189 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 259 Query: 249 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 308 |||||||||||||||||||||||||||||||| |||||||||||||||||||| || | | Sbjct: 260 aaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaatac 319 Query: 309 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 368 |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 320 tgcaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccg 379 Query: 369 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 439 Query: 429 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 486 |||| | |||||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 440 tactac--ggtgaccgatagtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 745 bits (376), Expect = 0.0 Identities = 524/569 (92%), Gaps = 6/569 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 2066 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 2124 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 2125 ggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-t 2183 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2184 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 2243 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 2244 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaacc 2303 Query: 246 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 305 |||||||||||||||||||||||||| | ||| ||||| ||||||||||||| |||||| Sbjct: 2304 gtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgag 2363 Query: 306 tgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctga 364 | | ||||||||||||| | |||||||||||||||||||| || | || ||||||| | Sbjct: 2364 tcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaa 2423 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2424 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 2483 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2484 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 2543 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 2544 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaa 2600 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||||| Sbjct: 2601 tcgaatctctgaccgcgtgcctgttgaag 2629
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 745 bits (376), Expect = 0.0 Identities = 379/380 (99%) Strand = Plus / Plus Query: 194 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 254 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 314 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 373 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 374 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 434 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 494 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 554 tgaccgcgtgcctgttgaag 573 |||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaag 380
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 745 bits (376), Expect = 0.0 Identities = 379/380 (99%) Strand = Plus / Plus Query: 194 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 254 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 314 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 373 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 374 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 434 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 494 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 554 tgaccgcgtgcctgttgaag 573 |||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaag 383
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 745 bits (376), Expect = 0.0 Identities = 524/569 (92%), Gaps = 6/569 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 118127 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 118069 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 118068 ggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-t 118010 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118009 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 117950 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 117949 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaacc 117890 Query: 246 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 305 |||||||||||||||||||||||||| | ||| ||||| ||||||||||||| |||||| Sbjct: 117889 gtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgag 117830 Query: 306 tgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctga 364 | | ||||||||||||| | |||||||||||||||||||| || | || ||||||| | Sbjct: 117829 tcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaa 117770 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 117769 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 117710 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 117709 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 117650 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 117649 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaa 117593 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||||| Sbjct: 117592 tcgaatctctgaccgcgtgcctgttgaag 117564 Score = 745 bits (376), Expect = 0.0 Identities = 524/569 (92%), Gaps = 6/569 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 89975 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 90033 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 90034 ggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-t 90092 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90093 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 90152 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 90153 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaacc 90212 Query: 246 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 305 |||||||||||||||||||||||||| | ||| ||||| ||||||||||||| |||||| Sbjct: 90213 gtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgag 90272 Query: 306 tgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctga 364 | | ||||||||||||| | |||||||||||||||||||| || | || ||||||| | Sbjct: 90273 tcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaa 90332 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 90333 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 90392 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 90393 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 90452 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 90453 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaa 90509 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||||| Sbjct: 90510 tcgaatctctgaccgcgtgcctgttgaag 90538
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 743 bits (375), Expect = 0.0 Identities = 522/568 (91%), Gaps = 5/568 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 81 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||| ||||||||||||| ||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 82 ggagctgaaaataagcatggatccggagattcccgaataggttaaccttttgaactgc-t 140 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 gctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagag 200 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 201 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagtagcctaaacc 260 Query: 246 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 305 ||||||||||||||||||| |||||| | |||||||| |||||||||||| ||||| Sbjct: 261 gtgaaaacggggttgtgggggagcaaagtaggcgttgtgtcgctaggcgaagcagttgaa 320 Query: 306 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 365 | | ||||| ||||||| | |||||||||||||||||||||||||| ||||||||| || Sbjct: 321 tcctgcaccatagatggtgagagtccagtagccgaaagcatcactagtttatgctctaac 380 Query: 366 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 425 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 381 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggct 440 Query: 426 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 500 Query: 486 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 545 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 501 cataggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaat 557 Query: 546 gtgatctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||||| Sbjct: 558 cgaatctctgaccgcgtgcctgttgaag 585
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 741 bits (374), Expect = 0.0 Identities = 377/378 (99%) Strand = Plus / Plus Query: 196 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 256 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 316 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 375 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 376 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 436 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 496 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 556 accgcgtgcctgttgaag 573 |||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaag 378
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 741 bits (374), Expect = 0.0 Identities = 447/469 (95%), Gaps = 2/469 (0%) Strand = Plus / Plus Query: 8 tggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggg 67 ||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||| Sbjct: 1 tggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgggg 59 Query: 68 agttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgc 127 |||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||| Sbjct: 60 agttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgc 118 Query: 128 tgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagga 187 ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119 cgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagagga 178 Query: 188 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 238 Query: 248 gaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtg 307 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 239 gaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaaca 298 Query: 308 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 367 ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 299 ccgcaccctagatggtgggagtccagtagccgaaagcatcactagcttacgctctgaccc 358 Query: 368 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 418 Query: 428 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 476 |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 419 atactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaa 467
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 737 bits (372), Expect = 0.0 Identities = 522/569 (91%), Gaps = 5/569 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 3911 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 3969 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 3970 gggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc- 4028 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||||||| || || | |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 4029 tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccaga 4088 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 4089 ggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaac 4148 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| Sbjct: 4149 cgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttga 4208 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 || | |||||| |||||| | ||||||||||||||||||| |||| |||| || | | Sbjct: 4209 gttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaa 4268 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4269 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 4328 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4329 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 4388 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| Sbjct: 4389 ccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaa 4445 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||| Sbjct: 4446 tcggatctctgaccgcgtgcctgttgaag 4474
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 737 bits (372), Expect = 0.0 Identities = 522/569 (91%), Gaps = 5/569 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 5 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 63 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||| |||||||||| |||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 64 gggagctgaaaataagtatagatccggagattcccgaataggttaaccttttaaactgc- 122 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||||||||||| || |||||||||||||||||||||||||||||||||||||||| || Sbjct: 123 tgctgaatccataggcgggcaagagacaacctggcgaactgaaacatcttagtagccgga 182 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 183 ggaagagaaagcaaaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaaac 242 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 |||||||||||||||||||| |||| | | |||| |||| ||||||||||||| ||||| Sbjct: 243 cgtgaaaacggggttgtgggggagctaaagaagcattgtattgctaggcgaagcagttga 302 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 || | ||||||||||||| | ||||||||| |||||||||| || ||||| ||||| | Sbjct: 303 gtcctgcaccctagatggtgagagtccagtaaccgaaagcattacaagcttgggctctaa 362 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 cccgagtaacatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| ||| Sbjct: 483 ccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggagaa 539 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||| Sbjct: 540 tcggatctctgaccgcgtgcctgttgaag 568
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 737 bits (372), Expect = 0.0 Identities = 522/569 (91%), Gaps = 5/569 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 21 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 79 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 80 gggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc- 138 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||||||| || || | |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 139 tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccaga 198 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 199 ggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaac 258 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| Sbjct: 259 cgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttga 318 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 || | |||||| |||||| | ||||||||||||||||||| |||| |||| || | | Sbjct: 319 gttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaa 378 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 438 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 498 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| Sbjct: 499 ccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaa 555 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||| Sbjct: 556 tcggatctctgaccgcgtgcctgttgaag 584
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 737 bits (372), Expect = 0.0 Identities = 522/569 (91%), Gaps = 5/569 (0%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 151224 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 151166 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 151165 gggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc- 151107 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||||||| || || | |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 151106 tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccaga 151047 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 151046 ggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaac 150987 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| Sbjct: 150986 cgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttga 150927 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 || | |||||| |||||| | ||||||||||||||||||| |||| |||| || | | Sbjct: 150926 gttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaa 150867 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150866 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 150807 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150806 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 150747 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| Sbjct: 150746 ccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaa 150690 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||| Sbjct: 150689 tcggatctctgaccgcgtgcctgttgaag 150661 Score = 737 bits (372), Expect = 0.0 Identities = 522/569 (91%), Gaps = 5/569 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 117442 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 117500 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 117501 gggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc- 117559 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||||||| || || | |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 117560 tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccaga 117619 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 117620 ggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaac 117679 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| Sbjct: 117680 cgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttga 117739 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 || | |||||| |||||| | ||||||||||||||||||| |||| |||| || | | Sbjct: 117740 gttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaa 117799 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117800 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 117859 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117860 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 117919 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| Sbjct: 117920 ccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaa 117976 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||| Sbjct: 117977 tcggatctctgaccgcgtgcctgttgaag 118005
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 737 bits (372), Expect = 0.0 Identities = 522/569 (91%), Gaps = 5/569 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 21 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 79 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 80 gggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc- 138 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||||||| || || | |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 139 tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccaga 198 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 199 ggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaac 258 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| Sbjct: 259 cgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttga 318 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 || | |||||| |||||| | ||||||||||||||||||| |||| |||| || | | Sbjct: 319 gttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaa 378 Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 438 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 498 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| Sbjct: 499 ccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaa 555 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||||||| Sbjct: 556 tcggatctctgaccgcgtgcctgttgaag 584
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 735 bits (371), Expect = 0.0 Identities = 525/573 (91%), Gaps = 9/573 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 22 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 80 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||| |||||||||| || ||||||||||||||| ||||||| ||||||||||||||| Sbjct: 81 gggagctgaaaataagtatggatccggagattcccgaataggttaaccttttaaactgc- 139 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||||||| ||| || |||||||||||||| ||||||||||||||||||||||||| || Sbjct: 140 tgctgaattcataggcgggcaagagacaacccggcgaactgaaacatcttagtagccgga 199 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 200 ggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggagcggcctaaac 259 Query: 245 cgtgaaaacggggttgtgggagagcaatacaa----gcgttgtgctgctaggcgaagcgg 300 |||||||||||||||||||| |||| |||||| || ||| ||||||||||||||| | Sbjct: 260 cgtgaaaacggggttgtgggggagctatacaaataagcattgcgctgctaggcgaagcag 319 Query: 301 ttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgct 360 |||||| | |||||| |||||| | ||||||||| |||||||||| || | |||||||| Sbjct: 320 ttgagtcctgcaccccagatggtgagagtccagtaaccgaaagcataacaatcttatgct 379 Query: 361 ctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 420 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 ctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 439 Query: 421 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaaga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaaga 499 Query: 481 acccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 540 ||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 500 acccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 556 Query: 541 ggaaagtgatctctgaccgcgtgcctgttgaag 573 ||| |||||||||||||||||||||||||| Sbjct: 557 agaatcggatctctgaccgcgtgcctgttgaag 589
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 724 bits (365), Expect = 0.0 Identities = 522/570 (91%), Gaps = 6/570 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 146538 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 146480 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | Sbjct: 146479 gggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac- 146421 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 146420 tgctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccaga 146361 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 146360 ggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaac 146301 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||| Sbjct: 146300 cgtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttga 146241 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctg 363 || | | ||||||||||| | |||||||||||||||||||||||| || |||||||| Sbjct: 146240 gtcctgtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctcca 146181 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 146180 acccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaagg 146121 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 146120 ctaaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacc 146061 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 ||| ||| ||||||||||||| |||||||| | ||||||||||||||||||| || Sbjct: 146060 cccgtcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggaga 146004 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 | |||| ||||||||||||||||||||| Sbjct: 146003 atcggatccctgaccgcgtgcctgttgaag 145974 Score = 724 bits (365), Expect = 0.0 Identities = 522/570 (91%), Gaps = 6/570 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 111924 cggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 111982 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | Sbjct: 111983 gggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac- 112041 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 112042 tgctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccaga 112101 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 112102 ggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaac 112161 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||| Sbjct: 112162 cgtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttga 112221 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctg 363 || | | ||||||||||| | |||||||||||||||||||||||| || |||||||| Sbjct: 112222 gtcctgtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctcca 112281 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 112282 acccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaagg 112341 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 112342 ctaaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacc 112401 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 ||| ||| ||||||||||||| |||||||| | ||||||||||||||||||| || Sbjct: 112402 cccgtcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggaga 112458 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 | |||| ||||||||||||||||||||| Sbjct: 112459 atcggatccctgaccgcgtgcctgttgaag 112488
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 82 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 141 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 142 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 202 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 262 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 322 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 381 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 382 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 442 ccgata 447 |||||| Sbjct: 361 ccgata 366
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 710 bits (358), Expect = 0.0 Identities = 527/570 (92%), Gaps = 19/570 (3%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 712 cggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 654 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||||||||||||||| ||||||||||||||||| ||||||||| ||| |||| | Sbjct: 653 gggagttgaaaataagcgtagatccggagattcccgaataggtca--ctt---gactg-c 600 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||||| |||||||||||||| || |||| ||| ||||||||||||||||| Sbjct: 599 tgctgaatccatg-gcaggcaagagaca--ct-gcga--tga-acatcttagtagccaga 547 Query: 185 ggaaaagaaa-gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 ggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 487 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| | Sbjct: 486 ccgtgaaaacggggttgtgggagagcgatacaagcgtcgtgctgctaggcgaagcggtgg 427 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 426 agtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctg 367 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 307 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 306 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 247 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 246 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 190 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||| Sbjct: 189 ccg-gggctctgaccgcgtgcctgttgaag 161
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 700 bits (353), Expect = 0.0 Identities = 380/388 (97%), Gaps = 1/388 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | | |||||||||||||||||||||||||||||||| Sbjct: 123450 gcggtggatacctaggtacccagag-atgaggaagggcgtagcaagcgacgaaatgcttc 123392 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 123391 ggggagttgaaattaagcatagatccggagattcccaaataggtcaaccttttgaactgc 123332 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123331 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 123272 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123271 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 123212 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123211 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 123152 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 123151 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 123092 Query: 364 acccgagtagcatggggcacgtggaatc 391 ||||||||||||||||||||||||||| Sbjct: 123091 ccccgagtagcatggggcacgtggaatc 123064 Score = 379 bits (191), Expect = e-102 Identities = 191/191 (100%) Strand = Plus / Minus Query: 383 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 443 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 503 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 563 gcctgttgaag 573 ||||||||||| Sbjct: 122640 gcctgttgaag 122630
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 700 bits (353), Expect = 0.0 Identities = 380/388 (97%), Gaps = 1/388 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | | |||||||||||||||||||||||||||||||| Sbjct: 12825991 gcggtggatacctaggtacccagag-atgaggaagggcgtagcaagcgacgaaatgcttc 12825933 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 12825932 ggggagttgaaattaagcatagatccggagattcccaaataggtcaaccttttgaactgc 12825873 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825872 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 12825813 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825812 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 12825753 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825752 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 12825693 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 12825692 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctg 12825633 Query: 364 acccgagtagcatggggcacgtggaatc 391 ||||||||||||||||||||||||||| Sbjct: 12825632 ccccgagtagcatggggcacgtggaatc 12825605 Score = 379 bits (191), Expect = e-102 Identities = 191/191 (100%) Strand = Plus / Minus Query: 383 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 443 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 503 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 563 gcctgttgaag 573 ||||||||||| Sbjct: 12825181 gcctgttgaag 12825171 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 328 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 387 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 700 bits (353), Expect = 0.0 Identities = 456/486 (93%), Gaps = 7/486 (1%) Strand = Plus / Minus Query: 89 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 148 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 149 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 209 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 269 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 327 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 328 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 388 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 447 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 448 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 507 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 508 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 567 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 39 Query: 568 ttgaag 573 |||||| Sbjct: 38 ttgaag 33
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 686 bits (346), Expect = 0.0 Identities = 427/451 (94%), Gaps = 6/451 (1%) Strand = Plus / Plus Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 303 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 362 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 363 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 423 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 482 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 483 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 542 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 543 aaagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaag 462
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 638 bits (322), Expect = e-180 Identities = 513/570 (90%), Gaps = 9/570 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | ||||||||||| |||| || ||||||||||||||| Sbjct: 21 cggtggatacctaggcacccagag-acgaggaagggtgtagtaatcgacgaaatgcttcg 79 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 |||||||||||||||||||||||||| |||||||| ||| || ||||||| | ||||| Sbjct: 80 gggagttgaaaataagcatagatccgtagattcccgaatggggtaacctttcacactgc- 138 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 139 tgctcaatccatgggcaggaaagagacaacctggcgaactgaaacatcttagtagccaga 198 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 199 ggaaaataaagcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaac 258 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttg 303 || |||||||||||||||||||||||||| |||||| ||||||||||||||||| | || Sbjct: 259 cgcgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcagctta 318 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 | || |||||||||||||| |||||||||||| | |||||||||||| || |||||| Sbjct: 319 aatgatgcaccctagatggcgaaagtccagtagtcaaaagcatcactacgttgcgctctg 378 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 379 acccgagtagcatgggacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaagg 438 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||| | Sbjct: 439 ctaaatactcctgggtaaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa-c 497 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| |||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 498 cccattggggagtgaaatagaacatgaaaccg---taagctaccaagcagtgggaggagc 554 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 || | ||||||||||||||||||||||| Sbjct: 555 caggg--ctctgaccgcgtgcctgttgaag 582
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 630 bits (318), Expect = e-177 Identities = 357/371 (96%), Gaps = 13/371 (3%) Strand = Plus / Minus Query: 208 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 268 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 328 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 387 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 388 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 442 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 443 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 503 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 562 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 563 gcctgttgaag 573 ||||||||||| Sbjct: 75126 gcctgttgaag 75116 Score = 385 bits (194), Expect = e-103 Identities = 206/209 (98%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 75692 gcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 75634 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 75633 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 75574 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75573 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 75514 Query: 184 aggaaaagaaagcaaaagcgattcccgta 212 ||||||||||||||||||||||||||||| Sbjct: 75513 aggaaaagaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 139 gcaggcaagagacaacctggcgaactgaaacatcttagta 178 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 439 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 630 bits (318), Expect = e-177 Identities = 357/371 (96%), Gaps = 13/371 (3%) Strand = Plus / Plus Query: 208 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 268 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 328 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 387 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 388 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 442 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 443 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 503 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 562 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 563 gcctgttgaag 573 ||||||||||| Sbjct: 382412 gcctgttgaag 382422 Score = 385 bits (194), Expect = e-103 Identities = 206/209 (98%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 381846 gcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 381904 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 381905 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 381964 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381965 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 382024 Query: 184 aggaaaagaaagcaaaagcgattcccgta 212 ||||||||||||||||||||||||||||| Sbjct: 382025 aggaaaagaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 139 gcaggcaagagacaacctggcgaactgaaacatcttagta 178 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 139 gcaggcaagagacaacctggcgaactgaaacatcttagta 178 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 439 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 439 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 630 bits (318), Expect = e-177 Identities = 357/371 (96%), Gaps = 13/371 (3%) Strand = Plus / Minus Query: 208 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 268 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 328 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 387 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 388 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 442 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 443 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 503 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 562 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 563 gcctgttgaag 573 ||||||||||| Sbjct: 113217 gcctgttgaag 113207 Score = 385 bits (194), Expect = e-103 Identities = 206/209 (98%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 113783 gcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 113725 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 113724 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 113665 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113664 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 113605 Query: 184 aggaaaagaaagcaaaagcgattcccgta 212 ||||||||||||||||||||||||||||| Sbjct: 113604 aggaaaagaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 139 gcaggcaagagacaacctggcgaactgaaacatcttagta 178 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 439 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 630 bits (318), Expect = e-177 Identities = 357/371 (96%), Gaps = 13/371 (3%) Strand = Plus / Minus Query: 208 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 268 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 328 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 387 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 388 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 442 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 443 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 503 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 562 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 563 gcctgttgaag 573 ||||||||||| Sbjct: 367899 gcctgttgaag 367889 Score = 630 bits (318), Expect = e-177 Identities = 357/371 (96%), Gaps = 13/371 (3%) Strand = Plus / Minus Query: 208 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 268 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 328 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 387 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 388 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 442 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 443 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 503 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 562 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 563 gcctgttgaag 573 ||||||||||| Sbjct: 184504 gcctgttgaag 184494 Score = 385 bits (194), Expect = e-103 Identities = 206/209 (98%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 368465 gcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 368407 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 368406 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 368347 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368346 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 368287 Query: 184 aggaaaagaaagcaaaagcgattcccgta 212 ||||||||||||||||||||||||||||| Sbjct: 368286 aggaaaagaaagcaaaagcgattcccgta 368258 Score = 385 bits (194), Expect = e-103 Identities = 206/209 (98%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 185070 gcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 185012 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 185011 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 184952 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184951 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 184892 Query: 184 aggaaaagaaagcaaaagcgattcccgta 212 ||||||||||||||||||||||||||||| Sbjct: 184891 aggaaaagaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 139 gcaggcaagagacaacctggcgaactgaaacatcttagta 178 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 439 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 109 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 168 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 169 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 229 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 288 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 289 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 348 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 349 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 408 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 409 gaccaccttgcaaggctaaatactcctgggtg 440 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 545 bits (275), Expect = e-152 Identities = 377/405 (93%), Gaps = 6/405 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 2621 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 2679 Query: 66 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 124 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 2680 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 2738 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 2739 tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccaga 2798 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2799 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 2858 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 2859 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 2918 Query: 305 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 362 | ||| |||||||||||||| | |||||||||||||||||||||||| ||||| ||||| Sbjct: 2919 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctct 2977 Query: 363 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 407 |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2978 gacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 545 bits (275), Expect = e-152 Identities = 377/405 (93%), Gaps = 6/405 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 876 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 934 Query: 66 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 124 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 935 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 993 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 994 tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccaga 1053 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 1113 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 1114 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 1173 Query: 305 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 362 | ||| |||||||||||||| | |||||||||||||||||||||||| ||||| ||||| Sbjct: 1174 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctct 1232 Query: 363 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 407 |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1233 gacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 1277
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 511 bits (258), Expect = e-142 Identities = 273/277 (98%), Gaps = 1/277 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 18 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 76 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 77 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 136 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 196 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 256 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgt 280 ||||||||||||||||||||||||||||||||||||| Sbjct: 257 ccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 511 bits (258), Expect = e-142 Identities = 273/277 (98%), Gaps = 1/277 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 18 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 76 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 77 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 136 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 196 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 256 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgt 280 ||||||||||||||||||||||||||||||||||||| Sbjct: 257 ccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 509 bits (257), Expect = e-141 Identities = 493/570 (86%), Gaps = 4/570 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 ||||||||||||||||||||||| | |||| ||||||||| |||| |||||||||||||| Sbjct: 143939 gcggtggatacctaggcacccagag-acgaagaagggcgtggcaaacgacgaaatgcttc 143997 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 |||||| ||||||| | |||||||||||||||||| ||||||| |||||| ||||||| Sbjct: 143998 ggggagccgaaaataggtatagatccggagattcccgaataggttaaccttccaaactgc 144057 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 ||||||||| || ||||| |||||||||||| ||||||||||||||||||||||||| | Sbjct: 144058 ctgctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccgg 144117 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||| | |||||||||||||||||| ||||| ||||||| |||| |||| |||||||| Sbjct: 144118 aggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaa 144177 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 ||||||| ||||||||||||||||| || || | || | ||||||||||| |||| Sbjct: 144178 ccgtgaagacggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttg 144237 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||| |||||| |||||| | ||||||||||||| ||| | |||||| | |||| Sbjct: 144238 agtgctgcaccccagatggtgatagtccagtagccggaagtacagctagctcacgctcca 144297 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||| |||||||||||||||| |||||||||||||||||| |||||||||||| |||| Sbjct: 144298 acccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaagg 144357 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 ||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 144358 ctaaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacc 144417 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 ||| ||| ||||||||||||| |||||||| ||||||||||||||||||||| || Sbjct: 144418 cccgtcggggagtgaaatagaacatgaaaccg---cgagctcccaagcagtgggaggaga 144474 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 | | ||||||| |||||||||||||||||| Sbjct: 144475 atgagatctctaaccgcgtgcctgttgaag 144504 Score = 509 bits (257), Expect = e-141 Identities = 493/570 (86%), Gaps = 4/570 (0%) Strand = Plus / Minus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 ||||||||||||||||||||||| | |||| ||||||||| |||| |||||||||||||| Sbjct: 88912 gcggtggatacctaggcacccagag-acgaagaagggcgtggcaaacgacgaaatgcttc 88854 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 |||||| ||||||| | |||||||||||||||||| ||||||| |||||| ||||||| Sbjct: 88853 ggggagccgaaaataggtatagatccggagattcccgaataggttaaccttccaaactgc 88794 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 ||||||||| || ||||| |||||||||||| ||||||||||||||||||||||||| | Sbjct: 88793 ctgctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccgg 88734 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||| | |||||||||||||||||| ||||| ||||||| |||| |||| |||||||| Sbjct: 88733 aggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaa 88674 Query: 244 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 303 ||||||| ||||||||||||||||| || || | || | ||||||||||| |||| Sbjct: 88673 ccgtgaagacggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttg 88614 Query: 304 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 363 ||||| |||||| |||||| | ||||||||||||| ||| | |||||| | |||| Sbjct: 88613 agtgctgcaccccagatggtgatagtccagtagccggaagtacagctagctcacgctcca 88554 Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||| |||||||||||||||| |||||||||||||||||| |||||||||||| |||| Sbjct: 88553 acccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaagg 88494 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 ||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 88493 ctaaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacc 88434 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 ||| ||| ||||||||||||| |||||||| ||||||||||||||||||||| || Sbjct: 88433 cccgtcggggagtgaaatagaacatgaaaccg---cgagctcccaagcagtgggaggaga 88377 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 | | ||||||| |||||||||||||||||| Sbjct: 88376 atgagatctctaaccgcgtgcctgttgaag 88347
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 492 bits (248), Expect = e-136 Identities = 251/252 (99%) Strand = Plus / Plus Query: 322 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 381 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 382 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 442 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 502 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 562 tgcctgttgaag 573 |||||||||||| Sbjct: 241 tgcctgttgaag 252
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 482 bits (243), Expect = e-133 Identities = 335/362 (92%), Gaps = 3/362 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | | |||||||||||||| || |||||||||||||||| Sbjct: 177053 ggtggatacctaggcacccagag-aggaggaagggcgtagtaatcgacgaaatgcttcgg 177111 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||||||||||| ||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 177112 ggagttgaaaatcagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 177170 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 |||||||||||| |||||||||||| |||| |||||||||||| |||||||||||||||| Sbjct: 177171 gctgaatccatgggcaggcaagagagaaccaggcgaactgaaagatcttagtagccagag 177230 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 177231 gaaaagaaagcaaaagcgattcccgtagtagcggcgggcgaaatgggagctgcctaaacc 177290 Query: 246 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 304 ||||||||||||||||||||||||||||||||||| |||| |||||||||||| | || Sbjct: 177291 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgcagctaggcgaagcagcccga 177350 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 177351 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttaggctctga 177410 Query: 365 cc 366 || Sbjct: 177411 cc 177412 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 439 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 439 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 158 gcgaactgaaacatcttagtagc 180 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 551 ctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaag 177427 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 158 gcgaactgaaacatcttagtagc 180 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 424 bits (214), Expect = e-115 Identities = 490/577 (84%), Gaps = 19/577 (3%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 ||||||||||||||||||||| | |||||||||||||||||| ||||| ||||||||| Sbjct: 139248 cggtggatacctaggcacccaaag-acgaggaagggcgtagcaggcgac--aatgcttcg 139192 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 || || | |||||||||||||||||||| ||| ||| ||| |||| || ||||||| Sbjct: 139191 ggaagccagagataagcatagatccggagatccccgaatgggttaaccccttgaactgcc 139132 Query: 125 tgctgaatccatgagcagg----caagagacaacctggcgaactgaaacatcttagtagc 180 ||||||||| | || |||||||| ||| ||||||| |||||||| | |||| Sbjct: 139131 ----gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatagc 139076 Query: 181 cagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcct 240 | | |||| |||| |||||||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 139075 cgggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagcct 139016 Query: 241 aaaccgtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgctaggcgaa 296 |||||||| ||||||||||||||||||| ||| ||| ||||||||| |||| ||| Sbjct: 139015 aaaccgtgggaacggggttgtgggagagcgataagtataag-gttgtgctgttaggtgaa 138957 Query: 297 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 356 ||||| |||| ||||| || ||| || || ||||| ||||||| ||||| ||| ||||| Sbjct: 138956 gcggtcgagtcccgcatcccagacggttagagtccggtagccggaagcagcacaggctta 138897 Query: 357 tgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 416 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 138896 cgctctgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacct 138837 Query: 417 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 476 | ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 138836 cgtaaggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaa 138777 Query: 477 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 536 ||||||||||| ||| ||||||||||||| |||||||| | ||||||| |||||||| Sbjct: 138776 aagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccgagcagtgg 138720 Query: 537 gaggggaaagtgatctctgaccgcgtgcctgttgaag 573 |||| ||| |||||||||||||||||||||||||| Sbjct: 138719 gaggagaattggatctctgaccgcgtgcctgttgaag 138683 Score = 424 bits (214), Expect = e-115 Identities = 490/577 (84%), Gaps = 19/577 (3%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 ||||||||||||||||||||| | |||||||||||||||||| ||||| ||||||||| Sbjct: 82629 cggtggatacctaggcacccaaag-acgaggaagggcgtagcaggcgac--aatgcttcg 82685 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 || || | |||||||||||||||||||| ||| ||| ||| |||| || ||||||| Sbjct: 82686 ggaagccagagataagcatagatccggagatccccgaatgggttaaccccttgaactgcc 82745 Query: 125 tgctgaatccatgagcagg----caagagacaacctggcgaactgaaacatcttagtagc 180 ||||||||| | || |||||||| ||| ||||||| |||||||| | |||| Sbjct: 82746 ----gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatagc 82801 Query: 181 cagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcct 240 | | |||| |||| |||||||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 82802 cgggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagcct 82861 Query: 241 aaaccgtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgctaggcgaa 296 |||||||| ||||||||||||||||||| ||| ||| ||||||||| |||| ||| Sbjct: 82862 aaaccgtgggaacggggttgtgggagagcgataagtataag-gttgtgctgttaggtgaa 82920 Query: 297 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 356 ||||| |||| ||||| || ||| || || ||||| ||||||| ||||| ||| ||||| Sbjct: 82921 gcggtcgagtcccgcatcccagacggttagagtccggtagccggaagcagcacaggctta 82980 Query: 357 tgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 416 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 82981 cgctctgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacct 83040 Query: 417 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 476 | ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 83041 cgtaaggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaa 83100 Query: 477 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 536 ||||||||||| ||| ||||||||||||| |||||||| | ||||||| |||||||| Sbjct: 83101 aagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccgagcagtgg 83157 Query: 537 gaggggaaagtgatctctgaccgcgtgcctgttgaag 573 |||| ||| |||||||||||||||||||||||||| Sbjct: 83158 gaggagaattggatctctgaccgcgtgcctgttgaag 83194
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 104 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 163 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 164 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 224 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 283 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 284 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 343 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 344 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 403 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 404 gcaaggaccaccttgcaag 422 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 431 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 490 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 491 ggtagtgaaatagaacgtgaaacc 514 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/91 (87%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 3 ggcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgctt 62 ||||||||||||||| |||||||| | |||||||||||| ||| ||||||||||||||| Sbjct: 3783 ggcggtggatacctatgcacccagag-acgaggaagggcatagttagcgacgaaatgctt 3725 Query: 63 cggggagttgaaaataagcatagatccggag 93 | | |||||| |||||||| |||||| |||| Sbjct: 3724 cagagagttgcaaataagcgtagatcaggag 3694
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 201 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 260 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 261 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 319 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 320 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 379 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 380 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 439 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 440 gaccgata 447 |||||||| Sbjct: 241 gaccgata 248
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 402 bits (203), Expect = e-109 Identities = 246/258 (95%), Gaps = 2/258 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 79748 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 79690 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 79689 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 79631 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79630 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 79571 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 79570 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 79511 Query: 246 gtgaaaacggggttgtgg 263 |||||||||||||||||| Sbjct: 79510 gtgaaaacggggttgtgg 79493
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 396 bits (200), Expect = e-107 Identities = 212/215 (98%), Gaps = 1/215 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 75786 gcggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 75844 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75845 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 75904 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75905 ctgcggaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 75964 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcg 218 ||||||||||||||||||||||||||||||||||| Sbjct: 75965 aggaaaagaaagcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 439 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 439 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 485 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 ggcgaactgaaacatcttag 176 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 392 bits (198), Expect = e-106 Identities = 201/202 (99%) Strand = Plus / Plus Query: 372 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 432 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 492 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 551 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 552 tctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaag 202
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 379 bits (191), Expect = e-102 Identities = 292/325 (89%), Gaps = 3/325 (0%) Strand = Plus / Minus Query: 249 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 308 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 309 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 368 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 369 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 429 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 488 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 489 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 548 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 549 atctctgaccgcgtgcctgttgaag 573 |||||||||||||||||| |||||| Sbjct: 5987 atctctgaccgcgtgccttttgaag 5963 Score = 262 bits (132), Expect = 1e-66 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 48 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 107 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 108 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 167 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 168 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 227 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 228 atgggagcagcctaaaccgt 247 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 369 bits (186), Expect = 7e-99 Identities = 186/186 (100%) Strand = Plus / Plus Query: 388 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 448 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 508 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 568 ttgaag 573 |||||| Sbjct: 181 ttgaag 186
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 355 bits (179), Expect = 1e-94 Identities = 233/249 (93%), Gaps = 4/249 (1%) Strand = Plus / Plus Query: 325 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 384 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 385 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 445 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 504 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 505 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 564 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 565 ctgttgaag 573 ||||||||| Sbjct: 239 ctgttgaag 247
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 310 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 369 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 370 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 429 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 430 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 489 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 490 gggtagtgaaatagaacgtgaaaccgt 516 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 327 bits (165), Expect = 2e-86 Identities = 430/509 (84%), Gaps = 11/509 (2%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | | || ||||||| || || || ||||||||| || Sbjct: 21 ggtggatacctaggcacccaggg-atgaagaagggcataataattgatgaaatgctttgg 79 Query: 66 ggagttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 |||||| |||| ||| ||||||||||||||||||| ||||||| ||||||| |||||| Sbjct: 80 ggagttaaaaaataaacatagatccggagattcccgaataggtaaaccttt--aactgc- 136 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||| | |||||| |||| ||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 137 tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatcttagtagccaga 194 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 |||||| |||||||||| |||||| |||||| ||| | |||| |||| ||||||||| Sbjct: 195 ggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaagggaacagcctaaat 254 Query: 245 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 304 || |||| ||||||| || ||||||| ||| || || |||||| || || || || Sbjct: 255 cgctaaaatggggttgggg---agcaataaaagtattttgttgctagacggagtagtgga 311 Query: 305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 364 || | | ||||||||||| | |||||||||| |||| |||| ||||||||||| | | Sbjct: 312 gttctgaaccctagatggtgagagtccagtagtataaagtatcattagcttatgctttta 371 Query: 365 -cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 ||||||||||||||| || |||||||||||||||||||||||||||||||||| |||| Sbjct: 372 acccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggaccaccttgaaagg 431 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||| Sbjct: 432 ctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacc 491 Query: 484 cccagtgggtagtgaaatagaacgtgaaa 512 |||| |||| |||||| |||||| ||||| Sbjct: 492 cccattggggagtgaactagaacatgaaa 520
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 291 bits (147), Expect = 1e-75 Identities = 219/242 (90%), Gaps = 1/242 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 81 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||| ||| || |||||| ||||||||||| ||| |||||| ||||| || ||||||| Sbjct: 82 ggagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcct 141 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 gctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagag 201 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 202 gaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaacc 261 Query: 246 gt 247 || Sbjct: 262 gt 263 Score = 262 bits (132), Expect = 1e-66 Identities = 191/210 (90%), Gaps = 3/210 (1%) Strand = Plus / Plus Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||||| Sbjct: 568 atggaatctctgaccgcgtgcctgttgaag 597
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 291 bits (147), Expect = 1e-75 Identities = 162/166 (97%), Gaps = 1/166 (0%) Strand = Plus / Plus Query: 4 gcggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttc 63 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 1565 gcggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 1623 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1624 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgc 1683 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 169 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1684 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 1729
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 318 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 376 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 377 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 436 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 437 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 496 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 497 gaaatagaacgtgaaaccgtgctgagctcc 526 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 318 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 376 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 377 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 436 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 437 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 496 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 497 gaaatagaacgtgaaaccgtgctgagctcc 526 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 318 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 376 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 377 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 436 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 437 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 496 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 497 gaaatagaacgtgaaaccgtgctgagctcc 526 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 519 tgagctcccaagcagtgggaggggaaagtgatc 551 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 318 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 376 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 377 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 436 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 437 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 496 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 497 gaaatagaacgtgaaaccgtgctgagctcc 526 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 519 tgagctcccaagcagtgggaggggaaagtgatc 551 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 281 bits (142), Expect = 1e-72 Identities = 217/241 (90%), Gaps = 1/241 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 127 ggtggatacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 185 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 | || ||| || |||||| ||||||||||| ||| |||||| ||||| || ||||||| Sbjct: 186 gaagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcct 245 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 gctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagag 305 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 306 gaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaacc 365 Query: 246 g 246 | Sbjct: 366 g 366 Score = 260 bits (131), Expect = 4e-66 Identities = 190/209 (90%), Gaps = 3/209 (1%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 | ||||||||||||||||||||||||| Sbjct: 673 tggaatctctgaccgcgtgcctgttgaag 701
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 281 bits (142), Expect = 1e-72 Identities = 235/265 (88%), Gaps = 1/265 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||| ||||||||| | |||||||||||||||||| Sbjct: 22 cggtggatacctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcg 80 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | Sbjct: 81 gggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactact 140 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 141 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 200 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 201 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 260 Query: 245 cgtgaaaacggggttgtgggagagc 269 || |||| ||||||||||||||||| Sbjct: 261 cgcgaaagcggggttgtgggagagc 285 Score = 234 bits (118), Expect = 3e-58 Identities = 246/288 (85%), Gaps = 3/288 (1%) Strand = Plus / Plus Query: 286 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 345 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 346 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 405 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 406 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 465 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 466 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 525 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 526 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaag 586
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 281 bits (142), Expect = 1e-72 Identities = 235/265 (88%), Gaps = 1/265 (0%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||| ||||||||| | |||||||||||||||||| Sbjct: 125243 cggtggatacctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcg 125185 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | Sbjct: 125184 gggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactact 125125 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 125124 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 125065 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 125064 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 125005 Query: 245 cgtgaaaacggggttgtgggagagc 269 || |||| ||||||||||||||||| Sbjct: 125004 cgcgaaagcggggttgtgggagagc 124980 Score = 281 bits (142), Expect = 1e-72 Identities = 235/265 (88%), Gaps = 1/265 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||| ||||||||| | |||||||||||||||||| Sbjct: 94623 cggtggatacctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcg 94681 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | Sbjct: 94682 gggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactact 94741 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 94742 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 94801 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 94802 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 94861 Query: 245 cgtgaaaacggggttgtgggagagc 269 || |||| ||||||||||||||||| Sbjct: 94862 cgcgaaagcggggttgtgggagagc 94886 Score = 234 bits (118), Expect = 3e-58 Identities = 246/288 (85%), Gaps = 3/288 (1%) Strand = Plus / Minus Query: 286 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 345 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 346 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 405 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 406 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 465 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 466 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 525 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 526 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaag 124679 Score = 234 bits (118), Expect = 3e-58 Identities = 246/288 (85%), Gaps = 3/288 (1%) Strand = Plus / Plus Query: 286 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 345 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 346 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 405 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 406 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 465 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 466 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 525 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 526 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaag 95187
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 280 bits (141), Expect = 5e-72 Identities = 217/242 (89%), Gaps = 1/242 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 || ||| |||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 10 ggyggagacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 68 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||| ||| || |||||| ||||||||||| ||| |||||| ||||| || ||||||| Sbjct: 69 ggagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcct 128 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 gctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagag 188 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 189 gaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaacc 248 Query: 246 gt 247 || Sbjct: 249 gt 250 Score = 262 bits (132), Expect = 1e-66 Identities = 191/210 (90%), Gaps = 3/210 (1%) Strand = Plus / Plus Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 | | ||||||||||||||||||||||||| Sbjct: 555 atggaatctctgaccgcgtgcctgttgaag 584
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 30 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 89 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434061 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19434002 Query: 90 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 149 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19434001 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19433942 Query: 150 acaacctggcgaactgaaacat 171 |||||||||||||||||||||| Sbjct: 19433941 acaacctggcgaactgaaacat 19433920 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 539 ggggaaagtgatctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaag 12182460 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 457 taccgtgagggaaaggtgaaaagaacc 483 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 30 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 89 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51588 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 51529 Query: 90 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 149 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 51528 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 51469 Query: 150 acaacctggcgaactgaaacat 171 |||||||||||||||||||||| Sbjct: 51468 acaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 30 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 89 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119493 Query: 90 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 149 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119492 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119433 Query: 150 acaacctggcgaactgaaacat 171 |||||||||||||||||||||| Sbjct: 119432 acaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Plus Query: 30 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 89 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 6129 Query: 90 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 149 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6130 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 6189 Query: 150 acaacctggcgaactgaaacat 171 |||||||||||||||||||||| Sbjct: 6190 acaacctggcgaactgaaacat 6211
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 256 bits (129), Expect = 7e-65 Identities = 182/196 (92%), Gaps = 3/196 (1%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaa-tgcttc 63 ||||||||||| |||||||||| | ||||||||| |||||| ||||||||||| |||||| Sbjct: 89861 cggtggataccaaggcacccagag-acgaggaagagcgtagtaagcgacgaaaatgcttc 89803 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 |||||||||||||||||| |||||||||||||||| ||||||| |||||||| |||||| Sbjct: 89802 ggggagttgaaaataagcgtagatccggagattccggaataggttaaccttttgaactgc 89743 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 89742 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccag 89684 Query: 184 aggaaaagaaagcaaa 199 |||||||||||||||| Sbjct: 89683 aggaaaagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 439 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 256 bits (129), Expect = 7e-65 Identities = 182/196 (92%), Gaps = 3/196 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaa-tgcttc 63 ||||||||||| |||||||||| | ||||||||| |||||| ||||||||||| |||||| Sbjct: 409 cggtggataccaaggcacccagag-acgaggaagagcgtagtaagcgacgaaaatgcttc 467 Query: 64 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 123 |||||||||||||||||| |||||||||||||||| ||||||| |||||||| |||||| Sbjct: 468 ggggagttgaaaataagcgtagatccggagattccggaataggttaaccttttgaactgc 527 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 528 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccag 586 Query: 184 aggaaaagaaagcaaa 199 |||||||||||||||| Sbjct: 587 aggaaaagaaagcaaa 602 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 439 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 248 bits (125), Expect = 2e-62 Identities = 208/234 (88%), Gaps = 5/234 (2%) Strand = Plus / Plus Query: 340 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 399 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 400 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 459 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 460 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 519 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 520 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 573 |||| ||||||||||||||| | || | ||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaag 601 Score = 133 bits (67), Expect = 7e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 139 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 198 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 199 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 258 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 259 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 318 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 319 a 319 | Sbjct: 325 a 325
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 246 bits (124), Expect = 7e-62 Identities = 189/210 (90%), Gaps = 3/210 (1%) Strand = Plus / Plus Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 | ||||||||||||||||||||||||| Sbjct: 514 atagaatctctgaccgcgtgcctgttgaag 543 Score = 184 bits (93), Expect = 2e-43 Identities = 185/212 (87%), Gaps = 4/212 (1%) Strand = Plus / Plus Query: 35 gaagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggag 93 |||||||||| |||||||||||||||| |||| |||| || |||| || ||||||||| Sbjct: 7 gaagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggag 64 Query: 94 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 153 || ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| || Sbjct: 65 atccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataa 123 Query: 154 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcag 183 Query: 214 tagcggcgagcgaaatgggagcagcctaaacc 245 ||| |||||||||||||||| ||||||||||| Sbjct: 184 tagtggcgagcgaaatgggaacagcctaaacc 215
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 293 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 352 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 353 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 412 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 413 accttgcaaggctaaatactcctgggtgaccga 445 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 312 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 371 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 372 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 431 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 432 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 491 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 492 gtagtgaaatagaacgtgaaa 512 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 182 bits (92), Expect = 8e-43 Identities = 218/255 (85%), Gaps = 4/255 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | | || ||||||| || || || |||||||||||| Sbjct: 21 ggtggatacctaggcacccaggg-atgaagaagggcataataattgatgaaatgcttcgg 79 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||||| ||||||| ||||||||||||||||||| ||||||| ||||||| |||||| || Sbjct: 80 ggagttaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ct 138 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 ||| | |||||| |||| ||| ||| ||||||| |||||||| ||||||||||| ||||| Sbjct: 139 gcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatcttagtagacagag 196 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 ||||| |||||||||| ||| || |||||| |||||| |||| |||| ||||||||||| Sbjct: 197 gaaaataaagcaaaagttattaccatagtagtggcgagtgaaaagggaacagcctaaacc 256 Query: 246 gtgaaaacggggttg 260 | |||| ||||||| Sbjct: 257 gctaaaatggggttg 271
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 230 bits (116), Expect = 4e-57 Identities = 210/239 (87%), Gaps = 2/239 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 ||||||||||||||| || ||| | |||| ||||||||||| |||||||||||||||||| Sbjct: 4055 cggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaatgcttcg 4113 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 |||||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| Sbjct: 4114 gggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc 4173 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||| || | |||||| ||||||| ||||||||||||||||||||||||| Sbjct: 4174 -gctgaatccataggcggataagagagaacctggtgaactgaaacatcttagtagccaga 4232 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 4233 ggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 4291 Score = 196 bits (99), Expect = 6e-47 Identities = 180/207 (86%) Strand = Plus / Plus Query: 310 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 369 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 370 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 429 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 430 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 489 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 490 gggtagtgaaatagaacgtgaaaccgt 516 ||| ||||||| ||||| ||||||||| Sbjct: 4550 ggggagtgaaagagaacatgaaaccgt 4576
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 230 bits (116), Expect = 4e-57 Identities = 210/239 (87%), Gaps = 2/239 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 ||||||||||||||| || ||| | |||| ||||||||||| |||||||||||||||||| Sbjct: 22 cggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaatgcttcg 80 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 |||||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| Sbjct: 81 gggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc 140 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||||||| || | |||||| ||||||| ||||||||||||||||||||||||| Sbjct: 141 -gctgaatccataggcggataagagagaacctggtgaactgaaacatcttagtagccaga 199 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 200 ggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258 Score = 196 bits (99), Expect = 6e-47 Identities = 180/207 (86%) Strand = Plus / Plus Query: 310 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 369 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 370 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 429 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 430 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 489 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 490 gggtagtgaaatagaacgtgaaaccgt 516 ||| ||||||| ||||| ||||||||| Sbjct: 517 ggggagtgaaagagaacatgaaaccgt 543
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 228 bits (115), Expect = 2e-56 Identities = 186/209 (88%), Gaps = 3/209 (1%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||| |||||| Sbjct: 555 tttgatctctgaccgcgtgcctattgaag 583 Score = 172 bits (87), Expect = 8e-40 Identities = 202/240 (84%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 || ||| ||||||||| |||| | |||| |||||||||| || |||||||| ||| ||| Sbjct: 10 ggyggagacctaggcatccagag-acgacgaagggcgtactaatcgacgaaacgctccgg 68 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 | || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | Sbjct: 69 gaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctcc 128 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 ||||||| || || | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 129 gctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagag 188 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 189 gaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 228 bits (115), Expect = 2e-56 Identities = 186/209 (88%), Gaps = 3/209 (1%) Strand = Plus / Minus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||| |||||| Sbjct: 115107 tttgatctctgaccgcgtgcctattgaag 115079 Score = 228 bits (115), Expect = 2e-56 Identities = 186/209 (88%), Gaps = 3/209 (1%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 |||||||||||||||||||| |||||| Sbjct: 86881 tttgatctctgaccgcgtgcctattgaag 86909 Score = 186 bits (94), Expect = 5e-44 Identities = 205/241 (85%), Gaps = 1/241 (0%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 ||||||||||||||||| |||| | |||| |||||||||| || |||||||| ||| || Sbjct: 115654 cggtggatacctaggcatccagag-acgacgaagggcgtactaatcgacgaaacgctccg 115596 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 || || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | Sbjct: 115595 ggaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctc 115536 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||| || || | ||||||||||||| ||| ||||||||||||||||||||| Sbjct: 115535 cgctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccaga 115476 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 ||||||||||||||||||||||||| |||||||||||||||||| |||| ||| |||||| Sbjct: 115475 ggaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaac 115416 Query: 245 c 245 | Sbjct: 115415 c 115415 Score = 186 bits (94), Expect = 5e-44 Identities = 205/241 (85%), Gaps = 1/241 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 ||||||||||||||||| |||| | |||| |||||||||| || |||||||| ||| || Sbjct: 86334 cggtggatacctaggcatccagag-acgacgaagggcgtactaatcgacgaaacgctccg 86392 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 || || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | Sbjct: 86393 ggaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctc 86452 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||| || || | ||||||||||||| ||| ||||||||||||||||||||| Sbjct: 86453 cgctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccaga 86512 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 ||||||||||||||||||||||||| |||||||||||||||||| |||| ||| |||||| Sbjct: 86513 ggaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaac 86572 Query: 245 c 245 | Sbjct: 86573 c 86573
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 228 bits (115), Expect = 2e-56 Identities = 226/262 (86%), Gaps = 1/262 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 |||||||||||||||| |||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 81 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||| || || ||| ||||||||| |||||||| |||||| |||||| || ||| ||| Sbjct: 82 ggagctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacct 141 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 | ||| ||| | |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 142 gtaaaatacataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 201 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 ||| | |||||||||||||||||| |||||| ||||||||||| |||| ||||||||||| Sbjct: 202 gaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaacc 261 Query: 246 gtgaaaacggggttgtgggaga 267 |||||| ||||||||||||||| Sbjct: 262 gtgaaagcggggttgtgggaga 283 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 369 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 428 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 429 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 488 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 489 tgggtagtgaaatagaacgtgaaacc 514 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaccgcgtgcctgttgaag 573 |||||||||||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaag 586
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 222 bits (112), Expect = 1e-54 Identities = 209/239 (87%), Gaps = 2/239 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 ||||||||||||||| || ||| | |||| ||||||||||| |||||||||||||||||| Sbjct: 22 cggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaatgcttcg 80 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 |||||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| Sbjct: 81 gggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc 140 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||||| ||| || | |||||| ||||||| ||||||||||||||||||||||||| Sbjct: 141 -gctgaatacataggcggataagagagaacctggtgaactgaaacatcttagtagccaga 199 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 |||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 200 ggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258 Score = 196 bits (99), Expect = 6e-47 Identities = 180/207 (86%) Strand = Plus / Plus Query: 310 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 369 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 370 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 429 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 430 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 489 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 490 gggtagtgaaatagaacgtgaaaccgt 516 ||| ||||||| ||||| ||||||||| Sbjct: 517 ggggagtgaaagagaacatgaaaccgt 543
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 327 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 386 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 387 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 446 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 447 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 506 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 507 gtgaaa 512 ||||| Sbjct: 504 atgaaa 509 Score = 153 bits (77), Expect = 8e-34 Identities = 200/235 (85%), Gaps = 5/235 (2%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggga 68 |||||||||||||||||| | ||| ||||||| || || || ||||||||||||||| Sbjct: 24 ggatacctaggcacccagggt-cgaagaagggcataataattgatgaaatgcttcgggga 82 Query: 69 gttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgc 127 ||| |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| ||| Sbjct: 83 gttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgc 141 Query: 128 tgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagga 187 | | |||||| | || ||||||| |||| || ||||||||||||||||||| |||||||| Sbjct: 142 ttattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagagga 199 Query: 188 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 242 ||| |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 200 aaataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 327 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 386 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 387 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 446 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 447 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 506 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 507 gtgaaa 512 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 54 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 112 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 113 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 172 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 173 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 232 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 233 agcagcctaa 242 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 327 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 386 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 387 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 446 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 447 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 506 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 507 gtgaaa 512 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 54 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 112 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 113 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 172 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 173 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 232 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 233 agcagcctaa 242 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 327 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 386 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 387 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 446 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 447 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 506 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 507 gtgaaa 512 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 54 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 112 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 113 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 172 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 173 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 232 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 233 agcagcctaa 242 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 327 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 386 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 387 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 446 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 447 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 506 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 507 gtgaaa 512 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 54 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 112 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 113 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 172 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 173 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 232 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 233 agcagcctaa 242 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 327 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 386 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 387 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 446 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 447 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 506 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 507 gtgaaa 512 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 54 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 112 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 113 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 172 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 173 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 232 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 233 ag 234 || Sbjct: 245 ag 246
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 327 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 386 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 387 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 446 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 447 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 506 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 507 gtgaaa 512 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 54 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 112 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 113 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 172 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 173 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 232 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 233 agcagcctaa 242 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 327 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 386 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 387 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 446 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 447 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 506 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 507 gtgaaa 512 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 54 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 112 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 113 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 172 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 173 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 232 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 233 agcagcctaa 242 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 327 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 386 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 387 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 446 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 447 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 506 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 507 gtgaaa 512 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 54 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 112 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 113 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 172 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 173 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 232 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 233 agcagcctaa 242 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 327 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 386 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 387 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 446 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 447 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 506 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 507 gtgaaa 512 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 54 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 112 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 113 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 172 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 173 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 232 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 233 agcagcctaa 242 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 327 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 386 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 387 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 446 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 447 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 506 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 507 gtgaaa 512 ||||| Sbjct: 504 atgaaa 509 Score = 155 bits (78), Expect = 2e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 54 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 112 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 113 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 172 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 173 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 232 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 233 agcagcctaa 242 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 327 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 386 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 387 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 446 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 447 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 506 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 507 gtgaaa 512 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 54 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 112 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 113 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 172 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 173 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 232 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 233 agcagcctaa 242 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 327 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 386 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 387 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 446 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 447 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 506 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 507 gtgaaa 512 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 54 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 112 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 113 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 172 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 173 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 232 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 233 agcagcctaa 242 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 327 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 386 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 387 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 446 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 447 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 506 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 507 gtgaaa 512 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 54 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 112 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 113 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 172 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 173 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 232 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 233 agcagcctaa 242 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 327 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 386 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 387 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 446 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 447 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 506 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 507 gtgaaa 512 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 54 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 112 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 113 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 172 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 173 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 232 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 233 agcagcctaa 242 | || ||||| Sbjct: 245 aacaacctaa 254
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 214 bits (108), Expect = 2e-52 Identities = 186/209 (88%), Gaps = 6/209 (2%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 | ||| |||||||||||||||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaag 612 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 145 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 204 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 205 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 214 bits (108), Expect = 2e-52 Identities = 186/209 (88%), Gaps = 6/209 (2%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 || | ||| |||||||||||||| |||||||| | ||| |||||||||||||| | Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtgggaggaaga 547 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 || || |||||||||||||||||||||| Sbjct: 548 ag--at-tctgaccgcgtgcctgttgaag 573 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 145 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 204 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 205 ttcccgtagtagcggcgagcgaa 227 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 9e-52 Identities = 140/151 (92%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccg 515 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 151 bits (76), Expect = 3e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 50 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 109 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 110 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 169 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 170 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 229 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 230 gggagcagcctaaacc 245 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaag 816
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 212 bits (107), Expect = 9e-52 Identities = 224/262 (85%), Gaps = 1/262 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 |||||||||||||||| |||| | |||| ||||||||||| |||||||||||||||| || Sbjct: 3057 ggtggatacctaggcatccagag-acgaagaagggcgtagtaagcgacgaaatgctttgg 3115 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||| || || ||| ||||||||| |||||||| |||||| |||||| || ||| ||| Sbjct: 3116 ggagctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacct 3175 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 | ||| ||| |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 3176 gtaaaatacatagtcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 3235 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 ||| | |||||||||||||||||| |||||| ||||||||||| |||| ||||||||||| Sbjct: 3236 gaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaacc 3295 Query: 246 gtgaaaacggggttgtgggaga 267 |||||| ||||||||||||||| Sbjct: 3296 gtgaaagcggggttgtgggaga 3317 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 369 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 428 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 429 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 488 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 489 tgggtagtgaaatagaacgtgaaacc 514 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaccgcgtgcctgttgaag 573 |||||||||||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaag 3620
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 212 bits (107), Expect = 9e-52 Identities = 113/115 (98%) Strand = Plus / Minus Query: 459 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 518 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 519 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 573 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 107936
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 327 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 386 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 387 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 446 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 447 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 506 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 507 gtgaaa 512 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 54 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 112 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 113 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 172 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 173 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 232 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 233 ag 234 || Sbjct: 245 ag 246
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 208 bits (105), Expect = 1e-50 Identities = 222/260 (85%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 |||||||||||||||| |||| | |||| ||||||||||| |||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagag-acgaagaagggcgtagtcagcgacgaaatgcttcgg 81 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||| || || ||||||| ||||| |||||||| |||||| ||||| || ||| ||| Sbjct: 82 ggagctgcgaacaagcataaatccgaagattcccgaatagggtaacctcttgtactacct 141 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 | |||| || | |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 142 gtagaattaataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 201 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||||||||||||| ||||| ||||||||||| |||| ||||||||||| Sbjct: 202 gaaaagaaagcaaaagcgattccctcagtagtggcgagcgaaacgggaacagcctaaacc 261 Query: 246 gtgaaaacggggttgtggga 265 | |||| ||||||||||||| Sbjct: 262 gcgaaagcggggttgtggga 281 Score = 170 bits (86), Expect = 3e-39 Identities = 131/146 (89%) Strand = Plus / Plus Query: 369 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 428 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 429 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 488 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 489 tgggtagtgaaatagaacgtgaaacc 514 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 141 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 200 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 201 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaag 915
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 164 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 224 cgaaatgggagcagcctaaacc 245 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 46.1 bits (23), Expect = 0.13 Identities = 87/108 (80%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 || ||| |||||||||||||| | |||| |||||||| || | || ||||| ||||||| Sbjct: 3 ggyggagacctaggcacccagag-acgatgaagggcgcagataccggcgaaacgcttcgg 61 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 |||| || || |||| | |||||| |||| ||| |||||| |||||| Sbjct: 62 ggagctggcaacaagctttgatccgaagatccccgaatagggcaacct 109 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 552 tctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||| Sbjct: 585 tctgaccgcgtgcctgttgaag 606
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 202 bits (102), Expect = 9e-49 Identities = 165/185 (89%), Gaps = 1/185 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||| |||||||||| || |||||||| |||||| Sbjct: 723 cggtggatacctaggcacccagag-acgaagaagggcgtactaaccgacgaaacgcttcg 781 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 124 ||||| |||||| |||||| ||||||||||||||| |||||| |||||| || |||| || Sbjct: 782 gggagctgaaaagaagcattgatccggagattcccgaatagggcaacctcttgaacttcc 841 Query: 125 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 842 tgctgaattcataggcaggatagagacaacctggcgaactgaaacatcttagtagccaga 901 Query: 185 ggaaa 189 ||||| Sbjct: 902 ggaaa 906
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 484 cc 485 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 143 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 202 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 203 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 246 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/90 (85%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 |||||||||||||||| | || | |||||||||||||| | | |||||||||||||||| Sbjct: 23 ggtggatacctaggcatctagag-acgaggaagggcgtggttaccgacgaaatgcttcgg 81 Query: 66 ggagttgaaaataagcatagatccggagat 95 ||||||| ||| | || |||||||||||| Sbjct: 82 ggagttggaaagaggctgagatccggagat 111
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 9e-49 Identities = 135/146 (92%) Strand = Plus / Plus Query: 369 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 428 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 429 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 488 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 489 tgggtagtgaaatagaacgtgaaacc 514 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 192 bits (97), Expect = 9e-46 Identities = 220/260 (84%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 |||||||||||||||| |||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 1790 ggtggatacctaggcatccagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 1848 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||| || || ||| ||| ||||| |||||||| |||||| ||||| || ||| ||| Sbjct: 1849 ggagctgcgaacaagtataaatccgaagattcccgaatagggtaacctcttgtactacct 1908 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 | |||| || | |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 1909 gtataatcaataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 1968 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 ||| | |||||||||||||||||| |||||| ||||||||||| |||| | ||||||||| Sbjct: 1969 gaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaaccgcctaaacc 2028 Query: 246 gtgaaaacggggttgtggga 265 || ||| ||||||||||||| Sbjct: 2029 gttaaagcggggttgtggga 2048
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 200 bits (101), Expect = 4e-48 Identities = 183/209 (87%), Gaps = 6/209 (2%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 | | | ||||||||||||||||||||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaag 600 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 146 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 205 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 206 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 246 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 85.7 bits (43), Expect = 1e-13 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 || ||| |||||||||||||| | |||| ||||||||||| || |||||||| ||||||| Sbjct: 10 ggyggagacctaggcacccagag-acgatgaagggcgtagtaaccgacgaaacgcttcgg 68 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 |||| || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 69 ggagctggaaacaagctttgatccgtagattcccgaatagggcaacct 116
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 200 bits (101), Expect = 4e-48 Identities = 183/209 (87%), Gaps = 6/209 (2%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 | | | ||||||||||||||||||||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaag 2369 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 146 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 205 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 206 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 246 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 99.6 bits (50), Expect = 1e-17 Identities = 95/109 (87%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 |||||||||||||||||||||| | |||| ||||||||||| || |||||||| |||||| Sbjct: 1775 cggtggatacctaggcacccagag-acgatgaagggcgtagtaaccgacgaaacgcttcg 1833 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 ||||| || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 1834 gggagctggaaacaagctttgatccgtagattcccgaatagggcaacct 1882
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 200 bits (101), Expect = 4e-48 Identities = 208/240 (86%), Gaps = 3/240 (1%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 ||||||||||||||| || ||| | |||| ||||||||||| ||||||||||| |||||| Sbjct: 22 cggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaacgcttcg 80 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct-tttaaactgc 123 |||||| ||||| | | ||||||||||||||||| ||| || |||| ||| ||||| Sbjct: 81 gggagtcgaaaacagacgtagatccggagattcccgaatggggtaacccctttgtactgc 140 Query: 124 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 183 | ||||||| ||| ||| | |||||||||||||| ||||||||||||||||||| |||| Sbjct: 141 c-gctgaattcataagcggataagagacaacctggtgaactgaaacatcttagtaaccag 199 Query: 184 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 ||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 200 aggaaaagaaagcaaaagcgatttcctgagtagcggcgagcgaaatgggagaagcctaaa 259 Score = 194 bits (98), Expect = 2e-46 Identities = 187/216 (86%), Gaps = 3/216 (1%) Strand = Plus / Plus Query: 358 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 417 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 418 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 477 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 478 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 537 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 538 aggggaaagtgatctctgaccgcgtgcctgttgaag 573 || ||| | |||| |||||||||||||||||||| Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaag 592
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 200 bits (101), Expect = 4e-48 Identities = 187/215 (86%), Gaps = 3/215 (1%) Strand = Plus / Plus Query: 359 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 418 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 419 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 478 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 479 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 538 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 539 ggggaaagtgatctctgaccgcgtgcctgttgaag 573 || || | || |||||||||||||||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaag 549 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 152 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 211 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 212 agtagcggcgagcgaaatgggagcagcctaaacc 245 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 30 acgaggaagggcgtagcaagcgacgaaatgcttcgg 65 |||| ||||||||||| ||||||||||| ||||||| Sbjct: 7 acgaagaagggcgtagtaagcgacgaaacgcttcgg 42
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 164 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 224 cgaaatgggagcagcctaaacc 245 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||| Sbjct: 745 ctgaccgcgtgcctgttgaag 765
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 6e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 160 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 219 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 220 cgagcgaaatgggagcagcctaaac 244 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/109 (81%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 20 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 78 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 ||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 79 gggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaccgcgtgcctgttgaag 573 |||||||||||||||||||| Sbjct: 581 tgaccgcgtgcctgttgaag 600
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 160 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 219 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 220 cgagcgaaatgggagcagcctaaacc 245 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/109 (81%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 20 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 78 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 ||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 79 gggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaccgcgtgcctgttgaag 573 |||||||||||||||||||| Sbjct: 635 tgaccgcgtgcctgttgaag 654
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 164 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 224 cgaaatgggagcagcctaaacc 245 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||| Sbjct: 593 ctgaccgcgtgcctgttgaag 613
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 198 bits (100), Expect = 1e-47 Identities = 183/209 (87%), Gaps = 5/209 (2%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 ||| | ||||||||||||||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaag 579 Score = 163 bits (82), Expect = 8e-37 Identities = 202/241 (83%), Gaps = 1/241 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 |||||||||||||||||| || | |||| ||||||||| | | |||||| | ||| ||| Sbjct: 10 ggtggatacctaggcacctagag-acgaagaagggcgtcactaccgacgatacgctccgg 68 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||| || || ||||| | ||||||||||||||| ||| || |||||| ||| ||| Sbjct: 69 ggagctggaagtaagcttcgatccggagattcccgaatggggcaacctcaaggactccct 128 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 ||||||| ||| ||||| |||| |||| || |||||||||||||||||||||| ||| Sbjct: 129 gctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccggag 188 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 189 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaaacc 248 Query: 246 g 246 | Sbjct: 249 g 249
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 160 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 219 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 220 cgagcgaaatgggagcagcctaaacc 245 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 160 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 219 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 220 cgagcgaaatgggagcagcctaaacc 245 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 44.1 bits (22), Expect = 0.50 Identities = 88/109 (80%), Gaps = 1/109 (0%) Strand = Plus / Minus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 152361 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 152303 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 ||||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 152302 gggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 152254 Score = 44.1 bits (22), Expect = 0.50 Identities = 88/109 (80%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 41842 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 41900 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 ||||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 41901 gggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 41949 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 554 tgaccgcgtgcctgttgaag 573 |||||||||||||||||||| Sbjct: 151806 tgaccgcgtgcctgttgaag 151787 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaccgcgtgcctgttgaag 573 |||||||||||||||||||| Sbjct: 42397 tgaccgcgtgcctgttgaag 42416
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 160 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 219 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 220 cgagcgaaatgggagcagcctaaacc 245 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/109 (81%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 20 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 78 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 ||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 79 gggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaccgcgtgcctgttgaag 573 |||||||||||||||||||| Sbjct: 635 tgaccgcgtgcctgttgaag 654
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 6e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 160 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 219 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 220 cgagcgaaatgggagcagcctaaac 244 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/109 (81%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 20 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 78 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 ||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 79 gggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaccgcgtgcctgttgaag 573 |||||||||||||||||||| Sbjct: 581 tgaccgcgtgcctgttgaag 600
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 160 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 219 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 220 cgagcgaaatgggagcagcctaaacc 245 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 44.1 bits (22), Expect = 0.50 Identities = 88/109 (80%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 14 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 72 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 ||||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 73 gggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 121 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaccgcgtgcctgttgaag 573 |||||||||||||||||||| Sbjct: 569 tgaccgcgtgcctgttgaag 588
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 160 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 219 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 220 cgagcgaaatgggagcagcctaaacc 245 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 44.1 bits (22), Expect = 0.50 Identities = 88/109 (80%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 99 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 157 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 ||||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 158 gggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 206 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaccgcgtgcctgttgaag 573 |||||||||||||||||||| Sbjct: 654 tgaccgcgtgcctgttgaag 673
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 485 ccagtgggtagtgaaatagaacgtgaaacc 514 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 160 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 219 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 220 cgagcgaaatgggagcagcctaaacc 245 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/101 (86%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 13 acctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttg 72 |||||||||||||| | |||| ||||||||| | || |||||||| ||||||||||| || Sbjct: 9 acctaggcacccagag-acgatgaagggcgtggaaaccgacgaaacgcttcggggagctg 67 Query: 73 aaaataagcatagatccggagattcccaaataggtcaacct 113 ||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 68 gaaacaagcaatgatccggagattcccgaatagggcaacct 108 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaag 574
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 485 ccagtgggtagtgaaatagaacgtgaaacc 514 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 160 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 219 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 220 cgagcgaaatgggagcagcctaaacc 245 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 75.8 bits (38), Expect = 1e-10 Identities = 90/105 (85%), Gaps = 2/105 (1%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggga 68 ||||||||||||||| || | |||| ||||||||| | || |||||||| |||||||||| Sbjct: 24815 ggatacctaggcacctagag-acgatgaagggcgtgg-aaccgacgaaacgcttcgggga 24872 Query: 69 gttgaaaataagcatagatccggagattcccaaataggtcaacct 113 | || ||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 24873 gctggaaacaagcaatgatccggagattcccgaatagggcaacct 24917 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaag 25383
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 368 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 427 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 428 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 487 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 488 gtgggtagtgaaatagaacgtgaaaccgt 516 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 160 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 219 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 220 cgagcgaaatgggagcagcctaaacc 245 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 59 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 55 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 109 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaccgcgtgcctgttgaag 573 |||||||||||||||||||| Sbjct: 578 tgaccgcgtgcctgttgaag 597
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 160 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 219 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 220 cgagcgaaatgggagcagcctaaacc 245 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 44.1 bits (22), Expect = 0.50 Identities = 88/109 (80%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 20 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 78 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 ||||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 79 gggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 127
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 188 bits (95), Expect = 1e-44 Identities = 158/177 (89%), Gaps = 4/177 (2%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 483 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 540 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtgggagg 528 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 151 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 210 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 211 tagtagcggcgagcgaaatgggagcagcctaaac 244 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 540 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 540 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 146 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 205 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 206 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 246 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 146 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 205 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 206 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 246 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||| |||||||||||||| |||||||| || ||| Sbjct: 171496 ggtggatacctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccgg 171438 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 |||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 171437 ggagctggaagcaagctctgatccggagattcccgaatagggcaacct 171390 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||| |||||||||||||| |||||||| || ||| Sbjct: 121430 ggtggatacctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccgg 121488 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 |||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 121489 ggagctggaagcaagctctgatccggagattcccgaatagggcaacct 121536 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 553 ctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaag 170921 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaag 122005
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 540 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 146 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 205 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 206 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 246 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||||||||||| | |||| |||||||||||||| |||||||| || ||| Sbjct: 21 ggtggatacctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccgg 79 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 |||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 80 ggagctggaagcaagctctgatccggagattcccgaatagggcaacct 127 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaag 596
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 483 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgt 516 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 137 bits (69), Expect = 4e-29 Identities = 201/242 (83%), Gaps = 3/242 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 || ||| |||||||||| ||| | |||| ||||||||| | || |||||||| ||||||| Sbjct: 10 ggyggagacctaggcactcagag-acgatgaagggcgtggtaaccgacgaaacgcttcgg 68 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||| || | | ||| | |||||| |||||||| |||||| |||||| || ||| | | Sbjct: 69 ggagctggatacgagctttgatccgaagattcccgaatagggcaacctcttggactcctt 128 Query: 126 gctgaatccatgagc-aggcaagagacaacctggcgaactgaaacatcttagtagccaga 184 ||||| ||| ||| | | |||||| |||| || ||| ||||||||||||||| || || Sbjct: 129 agtgaattcat-agctaagaaagagataacccggtgaattgaaacatcttagtaaccgga 187 Query: 185 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 244 ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 188 ggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaatgggaacagcctaaac 247 Query: 245 cg 246 || Sbjct: 248 cg 249 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaag 649
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 182 bits (92), Expect = 8e-43 Identities = 181/210 (86%), Gaps = 3/210 (1%) Strand = Plus / Plus Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 484 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 543 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 544 aagtgatctctgaccgcgtgcctgttgaag 573 | | |||| |||||||||||||||||||| Sbjct: 961 atctaatctttgaccgcgtgcctgttgaag 990 Score = 176 bits (89), Expect = 5e-41 Identities = 206/242 (85%), Gaps = 4/242 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 ||||||||||||| |||| || |||| ||||||||||| ||||||||||||||||||| Sbjct: 426 ggtggatacctagacacctaga-aacgatgaagggcgtagaaagcgacgaaatgcttcgg 484 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 | || || ||| || | |||||||||||| |||||| |||||| | ||||||| | Sbjct: 485 ttaactgcgaacaag--taaacccggagattcccgaatagggcaacctgt-aaactgctt 541 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 ||||||| ||| || | |||||||||||||| ||||||||||||||||||| |||||| Sbjct: 542 gctgaattcataggcgagtaagagacaacctggtgaactgaaacatcttagtaaccagag 601 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 ||| |||||||||||||||||||| |||||| ||||||||||| |||| ||||||||||| Sbjct: 602 gaacagaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaacc 661 Query: 246 gt 247 || Sbjct: 662 gt 663
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 182 bits (92), Expect = 8e-43 Identities = 181/209 (86%), Gaps = 5/209 (2%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 544 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 545 agtgatctctgaccgcgtgcctgttgaag 573 ||| |||||||||||||||||||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaag 720 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 145 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 204 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 205 ttcccgtagtagcggcgagcgaaatggga 233 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 8e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 159 bits (80), Expect = 1e-35 Identities = 179/212 (84%) Strand = Plus / Plus Query: 35 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 94 ||||||||||| | |||||| | ||||||||||| || || |||| | |||||| ||| Sbjct: 38 gaagggcgtagttaccgacgatacgcttcggggagctggaatcaagctttgatccgaaga 97 Query: 95 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 154 ||||| |||||| ||||||| || ||| |||| ||||| ||| |||| |||||||||| Sbjct: 98 ttcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaac 157 Query: 155 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 214 | |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| |||| Sbjct: 158 ccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttagt 217 Query: 215 agcggcgagcgaaatgggagcagcctaaaccg 246 || ||||||||||| |||| ||| |||||||| Sbjct: 218 agtggcgagcgaaaagggatcagtctaaaccg 249 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 552 tctgaccgcgtgcctgttgaag 573 |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaag 577
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 485 ccagtgggtagtgaaatagaacgtgaaacc 514 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 97.6 bits (49), Expect = 4e-17 Identities = 193/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgatgaagggcgcagataccggcgatacgcttcgg 79 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||| || || |||| | ||||||||||||||| |||||| |||||| | ||||| ||| Sbjct: 80 ggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaaactacct 139 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 ||| ||| ||| ||||| ||||| | |||||||||||||| |||||| ||| Sbjct: 140 atataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagtagctggag 199 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||| |||||||||||||||| ||||| |||| |||| |||||||||| Sbjct: 200 gaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagcctaaacc 259 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||| Sbjct: 582 ctgaccgcgtgcctgttgaag 602
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 485 ccagtgggtagtgaaatagaacgtgaaacc 514 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 160 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 219 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 220 cgagcgaaatgggagcagcctaaacc 245 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 485 ccagtgggtagtgaaatagaacgtgaaacc 514 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 97.6 bits (49), Expect = 4e-17 Identities = 193/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgatgaagggcgcagataccggcgatacgcttcgg 79 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 |||| || || |||| | ||||||||||||||| |||||| |||||| | ||||| ||| Sbjct: 80 ggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaaactacct 139 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 ||| ||| ||| ||||| ||||| | |||||||||||||| |||||| ||| Sbjct: 140 atataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagtagctggag 199 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||| |||||||||||||||| ||||| |||| |||| |||||||||| Sbjct: 200 gaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagcctaaacc 259 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||| Sbjct: 582 ctgaccgcgtgcctgttgaag 602
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 368 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 427 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 428 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 487 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 488 gtgggtagtgaaatagaacgtgaaaccgt 516 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 485 ccagt-gggtagtgaaatagaacgtgaaaccgt 516 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 145 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 204 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 205 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 246 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 61.9 bits (31), Expect = 2e-06 Identities = 89/108 (82%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 || ||| |||||||||||||| | |||| ||||||||| | || |||||||| ||||||| Sbjct: 10 ggyggagacctaggcacccagag-acgaagaagggcgtggaaaccgacgaaacgcttcgg 68 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 | || || ||| |||| |||||| |||||||| |||||| |||||| Sbjct: 69 gaagctggaaacaagctatgatccgaagattcccgaatagggcaacct 116
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtg 517 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 158 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 217 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 218 ggcgagcgaaatgggagcagcctaaacc 245 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtg 517 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 158 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 217 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 218 ggcgagcgaaatgggagcagcctaaacc 245 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtg 517 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 161 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 220 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 221 gagcgaaatgggagcagcctaaacc 245 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtg 517 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 158 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 217 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 218 ggcgagcgaaatgggagcagcctaaacc 245 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtg 517 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 158 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 217 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 218 ggcgagcgaaatgggagcagcctaaacc 245 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtg 517 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 158 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 217 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 218 ggcgagcgaaatgggagcagcctaaacc 245 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtg 517 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 158 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 217 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 218 ggcgagcgaaatgggagcagcctaaacc 245 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgtg 517 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 158 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 217 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 218 ggcgagcgaaatgggagcagcctaaacc 245 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 484 c 484 | Sbjct: 485 c 485 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 151 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 210 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 211 tagtagcggcgagcgaaatgggagcagcctaaaccg 246 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 287 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 336 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||| Sbjct: 551 ctgaccgcgtgcctgttgaag 571
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 176 bits (89), Expect = 5e-41 Identities = 98/101 (97%) Strand = Plus / Minus Query: 473 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 532 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 533 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 107467
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 437 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 438 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 497 Query: 484 c 484 | Sbjct: 498 c 498 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 151 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 210 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 163 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 222 Query: 211 tagtagcggcgagcgaaatgggagcagcctaaaccg 246 |||||||||||||||| |||| |||||||||||| Sbjct: 223 cagtagcggcgagcgaagagggaacagcctaaaccg 258 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 287 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 336 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 300 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 349 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||| Sbjct: 564 ctgaccgcgtgcctgttgaag 584
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 364 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 423 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 4952 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 5011 Query: 424 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 483 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 5012 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 5071 Query: 484 c 484 | Sbjct: 5072 c 5072 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 151 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 210 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 4737 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 4796 Query: 211 tagtagcggcgagcgaaatgggagcagcctaaaccg 246 |||||||||||||||| |||| |||||||||||| Sbjct: 4797 cagtagcggcgagcgaagagggaacagcctaaaccg 4832 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 287 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 336 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 4874 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 4923 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||| Sbjct: 5138 ctgaccgcgtgcctgttgaag 5158
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 174 bits (88), Expect = 2e-40 Identities = 139/152 (91%), Gaps = 3/152 (1%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| Sbjct: 136865 cccgagtagcatggggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggc 136924 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 483 ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| | Sbjct: 136925 taaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-c 136983 Query: 484 cccagt-gggtagtgaaatagaacgtgaaacc 514 |||||| ||| |||| |||||||| ||||||| Sbjct: 136984 cccagtaggggagtgcaatagaacatgaaacc 137015 Score = 174 bits (88), Expect = 2e-40 Identities = 139/152 (91%), Gaps = 3/152 (1%) Strand = Plus / Minus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| Sbjct: 48679 cccgagtagcatggggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggc 48620 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 483 ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| | Sbjct: 48619 taaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-c 48561 Query: 484 cccagt-gggtagtgaaatagaacgtgaaacc 514 |||||| ||| |||| |||||||| ||||||| Sbjct: 48560 cccagtaggggagtgcaatagaacatgaaacc 48529 Score = 125 bits (63), Expect = 2e-25 Identities = 197/241 (81%), Gaps = 1/241 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 |||||||||||||||||||| | || |||||||| | || || ||||| ||||||| Sbjct: 136496 ggtggatacctaggcacccaaagtt-gatgaagggcgcggaaaccggcgaaacgcttcgg 136554 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 ||||||| ||| | || | |||||| |||| ||| ||| || ||||| |||||||| || Sbjct: 136555 ggagttggaaacacgctttgatccgaagatacccgaatggggcaaccctttaaactaccg 136614 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 |||||| ||| | ||||||| |||| | ||||||||||||||||||| | ||| Sbjct: 136615 actgaattcataggtcggcaagaagtaacccgctgaactgaaacatcttagtaagcggag 136674 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||| ||||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 136675 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaagtgggaacagcctaaacc 136734 Query: 246 g 246 | Sbjct: 136735 g 136735 Score = 125 bits (63), Expect = 2e-25 Identities = 197/241 (81%), Gaps = 1/241 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 |||||||||||||||||||| | || |||||||| | || || ||||| ||||||| Sbjct: 49048 ggtggatacctaggcacccaaagtt-gatgaagggcgcggaaaccggcgaaacgcttcgg 48990 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 125 ||||||| ||| | || | |||||| |||| ||| ||| || ||||| |||||||| || Sbjct: 48989 ggagttggaaacacgctttgatccgaagatacccgaatggggcaaccctttaaactaccg 48930 Query: 126 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 185 |||||| ||| | ||||||| |||| | ||||||||||||||||||| | ||| Sbjct: 48929 actgaattcataggtcggcaagaagtaacccgctgaactgaaacatcttagtaagcggag 48870 Query: 186 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 |||||||||||||| ||||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 48869 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaagtgggaacagcctaaacc 48810 Query: 246 g 246 | Sbjct: 48809 g 48809
>gb|L42990.1|CRECPRGOLD Chlamydomonas nivalis chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3403 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 584 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 643 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||| |||| Sbjct: 644 taaatattcctgggtgaccgatagtgaaatagtaccacgagggaaaggtgaaaagtaccc 703 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 | ||| ||||||||||||| ||||||||| Sbjct: 704 ctgtgggggagtgaaatagaacatgaaaccgt 735 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 146 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 205 |||||||||| | |||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 141 agagacaacccagtgaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgat 200 Query: 206 tcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 ||||||||||| |||||||||| |||| ||||||||| Sbjct: 201 tcccgtagtagtggcgagcgaaccgggaacagcctaaa 238 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaccgcgtgcctgttgaag 573 |||||||||||||||||||| Sbjct: 769 tgaccgcgtgcctgttgaag 788
>gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5001 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 381 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 440 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 441 taaatactcttgggtgaccgatagcgaaacagtaccgtgagggaaaggtgaaaagaacct 500 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 | ||| ||||||||||| | ||||||||| Sbjct: 501 catcaggggagtgaaatagaccatgaaaccgt 532 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 146 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 205 |||||||||| | ||| ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 149 agagacaaccgagtgaattgaaacatcttagtagctcgaggaagagaaagcaaaagcgat 208 Query: 206 tcccgtagtagcggcgagcgaaatgggagcagcctaaa 243 ||||| |||||||||||||||||||||| ||||||||| Sbjct: 209 tcccggagtagcggcgagcgaaatgggaacagcctaaa 246 Score = 50.1 bits (25), Expect = 0.008 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 65 |||||||||||||||||||| | |||| |||||||||| | |||||| | ||||||| Sbjct: 10 ggtggatacctaggcacccaaag-acgatgaagggcgtacttaccgacgatacgcttcgg 68 Query: 66 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 |||| || || | || | |||||| |||||||| |||||| |||||| Sbjct: 69 ggagctggaatgacgctttgatccgaagattcccgaatagggcaacct 116
>gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3455 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 624 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 683 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 684 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 743 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 | || ||||||||||||| ||||||||| Sbjct: 744 ttgttagggagtgaaatagaacatgaaaccgt 775 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 160 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 219 |||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaatagaaagcaaacgcgattcccgtagtagcgg 234 Query: 220 cgagcgaaatgggagcagcctaaacc 245 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 60.0 bits (30), Expect = 8e-06 Identities = 90/109 (82%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 20 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 78 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 ||||| || || |||||| ||||||||||||||| |||||| |||||| Sbjct: 79 gggagctggcaacaagcattgatccggagattcccgaatagggcaacct 127 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaccgcgtgcctgttgaag 573 |||||||||||||||||||| Sbjct: 808 tgaccgcgtgcctgttgaag 827
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 517 cccgagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 576 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| ||||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 577 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaatggtgaaaagaaccc 636 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 | ||| ||||||||||||| ||||||||| Sbjct: 637 ctgtgggggagtgaaatagaacatgaaaccgt 668 Score = 139 bits (70), Expect = 1e-29 Identities = 193/233 (82%), Gaps = 1/233 (0%) Strand = Plus / Plus Query: 13 acctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttg 72 |||||||||| ||| | |||| |||||||| || | || ||||| ||||||||||| || Sbjct: 28 acctaggcactcagag-acgatgaagggcgcagataccggcgaaacgcttcggggagctg 86 Query: 73 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 132 || |||| | |||||| |||||||| |||||| |||||| ||||||| ||| ||| Sbjct: 87 gcaacaagctttgatccgaagattcccgaatagggcaacctattaaacttcctatacaat 146 Query: 133 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 192 ||| ||| |||||| |||| | |||||||||||||| |||||| |||||||||| Sbjct: 147 tcatatttaggaaagagagaacccagtgaactgaaacatctaagtagctggaggaaaaga 206 Query: 193 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 245 ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 207 aagcaaaagcgattcccgtagtagcggcgagcgaactgggatcagcctaaacc 259
>gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3923 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 459 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 518 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 519 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 578 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 | || ||||||||||||| ||||||||| Sbjct: 579 ttgttagggagtgaaatagaacatgaaaccgt 610 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 160 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 219 |||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaatagaaagcaaacgcgattcccgtagtagcgg 234 Query: 220 cgagcgaaatgggagcagcctaaacc 245 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 60.0 bits (30), Expect = 8e-06 Identities = 90/109 (82%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 5 cggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcg 64 ||||||| |||||||||| ||| | |||| |||||||| || | || ||| | |||||| Sbjct: 20 cggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcg 78 Query: 65 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 113 ||||| || || |||||| ||||||||||||||| |||||| |||||| Sbjct: 79 gggagctggcaacaagcattgatccggagattcccgaatagggcaacct 127 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaccgcgtgcctgttgaag 573 |||||||||||||||||||| Sbjct: 643 tgaccgcgtgcctgttgaag 662
>gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large subunit ribosomal RNA (rrnL) gene Length = 2792 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 509 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 568 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 569 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 628 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 || |||| ||||||||||||| ||||||||| Sbjct: 629 ccgttggggagtgaaatagaacatgaaaccgt 660 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 160 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 219 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| || Sbjct: 156 gaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgattcccgtagtagtgg 215 Query: 220 cgagcgaaatgggagcagcctaaacc 245 |||||||| |||| ||||||||||| Sbjct: 216 cgagcgaaccgggaacagcctaaacc 241 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ctgaccgcgtgcctgttgaag 573 ||||||||||||||||||||| Sbjct: 691 ctgaccgcgtgcctgttgaag 711
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 ||||||||||||||| |||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 425 cccgagtagcatgggacacgtggaatcccgtgtgaatccgcgaggaccacctcgtaaggc 484 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||||||||| ||||||||||| ||| ||||||| ||||||| |||||||||||||| Sbjct: 485 taaatactcctgagtgaccgatagagaaagagtaccgcgagggaacggtgaaaagaaccc 544 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 | |||| ||||||||||||| ||||||||| Sbjct: 545 ctgttggggagtgaaatagaacatgaaaccgt 576 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 160 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 219 |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 158 gaactgaaacatctaagtagccggaggaaaagaaagcaaacgcgattcccgtagtagcgg 217 Query: 220 cgagcgaaatgggagcagcctaaacc 245 |||||||| |||| |||||||||| Sbjct: 218 cgagcgaaccgggaagagcctaaacc 243
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 424 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 485 ccagtgggtagtgaaatagaacgtgaaaccgt 516 || |||| ||||||||||||| ||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgt 587 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 160 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 219 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 220 cgagcgaaatgggagcagcctaaacc 245 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242
>gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2786 Score = 174 bits (88), Expect = 2e-40 Identities = 134/148 (90%), Gaps = 1/148 (0%) Strand = Plus / Plus Query: 369 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 428 |||||||||||||||||||||||||||||||||| || |||||||||| | ||||||||| Sbjct: 484 agtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggctaaa 543 Query: 429 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaaccccca 487 |||||||| ||||||||||||||| ||||||| |||||||||||||||| |||| ||| | Sbjct: 544 tactcctgagtgaccgatagcgaactagtaccatgagggaaaggtgaaatagaatcccga 603 Query: 488 gtgggtagtgaaatagaacgtgaaaccg 515 | ||| |||||||||||| |||||||| Sbjct: 604 gagggaagtgaaatagaaaatgaaaccg 631 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 164 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 161 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccttagtagcggcgag 220 Query: 224 cgaaatgggagcagcctaaaccg 246 |||| |||| |||||||||||| Sbjct: 221 cgaacagggaacagcctaaaccg 243 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaccgcgtgcctgttgaag 573 |||||||||||||||||||| Sbjct: 666 tgaccgcgtgcctgttgaag 685 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,879,875 Number of Sequences: 3902068 Number of extensions: 3879875 Number of successful extensions: 118058 Number of sequences better than 10.0: 26557 Number of HSP's better than 10.0 without gapping: 26384 Number of HSP's successfully gapped in prelim test: 208 Number of HSP's that attempted gapping in prelim test: 74017 Number of HSP's gapped (non-prelim): 41821 length of query: 573 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 550 effective length of database: 17,143,297,704 effective search space: 9428813737200 effective search space used: 9428813737200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
