ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd25d23 |
|---|---|
| Clone Library Name | barley_pub |
>VATE_MESCR (Q40272) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) Length = 226 Score = 73.2 bits (178), Expect = 2e-13 Identities = 36/46 (78%), Positives = 40/46 (86%) Frame = +3 Query: 3 NASRIKVLQAQDDLVNKMKEDAMXELLNISSNHHEYRNLLKELVVQ 140 NASRIKVLQAQDDLVN MKE A ELL +S +HH+YRNLLKEL+VQ Sbjct: 75 NASRIKVLQAQDDLVNAMKEAASKELLLVSGDHHQYRNLLKELIVQ 120
>VATE_SPIOL (Q41396) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) Length = 229 Score = 72.4 bits (176), Expect = 3e-13 Identities = 35/46 (76%), Positives = 39/46 (84%) Frame = +3 Query: 3 NASRIKVLQAQDDLVNKMKEDAMXELLNISSNHHEYRNLLKELVVQ 140 NASRIKVLQAQDDLVN MKE+A ELL +S +HH Y+ LLKELVVQ Sbjct: 75 NASRIKVLQAQDDLVNSMKEEAAKELLRVSGDHHHYKRLLKELVVQ 120
>VATE_GOSHI (O23948) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) Length = 237 Score = 67.0 bits (162), Expect = 1e-11 Identities = 31/46 (67%), Positives = 38/46 (82%) Frame = +3 Query: 3 NASRIKVLQAQDDLVNKMKEDAMXELLNISSNHHEYRNLLKELVVQ 140 NASRIKVLQAQDD+VN MKE A + LN+S +HH Y+ LLK+L+VQ Sbjct: 75 NASRIKVLQAQDDVVNAMKESASKDFLNVSHDHHVYKRLLKDLIVQ 120
>VATE_CITLI (Q9SWE7) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) (CLVE-1) Length = 230 Score = 63.2 bits (152), Expect = 2e-10 Identities = 30/46 (65%), Positives = 38/46 (82%) Frame = +3 Query: 3 NASRIKVLQAQDDLVNKMKEDAMXELLNISSNHHEYRNLLKELVVQ 140 NASRIKVLQAQDDLV+ M E A E+LN+S +H+ Y+ LLK+L+VQ Sbjct: 75 NASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKDLIVQ 120
>VATE_ARATH (Q39258) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) Length = 230 Score = 62.8 bits (151), Expect = 3e-10 Identities = 29/46 (63%), Positives = 38/46 (82%) Frame = +3 Query: 3 NASRIKVLQAQDDLVNKMKEDAMXELLNISSNHHEYRNLLKELVVQ 140 NASRIKVLQAQDD+VN MK+ A +LLN+S + + Y+ LLK+L+VQ Sbjct: 75 NASRIKVLQAQDDIVNAMKDQAAKDLLNVSRDEYAYKQLLKDLIVQ 120
>VATE_CITUN (Q9MB46) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) Length = 230 Score = 61.6 bits (148), Expect = 6e-10 Identities = 30/46 (65%), Positives = 37/46 (80%) Frame = +3 Query: 3 NASRIKVLQAQDDLVNKMKEDAMXELLNISSNHHEYRNLLKELVVQ 140 NASRIKVLQAQDDLV+ M E A E+LN+S +H+ Y+ LLK L+VQ Sbjct: 75 NASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
>VATE_DROME (P54611) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) (V-ATPase 28 kDa subunit) Length = 226 Score = 38.9 bits (89), Expect = 0.004 Identities = 17/46 (36%), Positives = 30/46 (65%) Frame = +3 Query: 3 NASRIKVLQAQDDLVNKMKEDAMXELLNISSNHHEYRNLLKELVVQ 140 N +R+KVL+ ++D V+ + +DA L ++ N EY +L +L+VQ Sbjct: 77 NQARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQ 122
>VATE_HETSC (Q9U1G5) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) Length = 226 Score = 37.0 bits (84), Expect = 0.015 Identities = 18/46 (39%), Positives = 29/46 (63%) Frame = +3 Query: 3 NASRIKVLQAQDDLVNKMKEDAMXELLNISSNHHEYRNLLKELVVQ 140 N SR+K L+A+DD + + E+A L IS++ Y +LK L++Q Sbjct: 77 NQSRLKCLKARDDHLKNVLEEARANLSKISADRERYPAILKGLLLQ 122
>VATE_MOUSE (P50518) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) (V-ATPase 31 kDa subunit) (P31) Length = 228 Score = 36.2 bits (82), Expect = 0.026 Identities = 17/46 (36%), Positives = 29/46 (63%) Frame = +3 Query: 3 NASRIKVLQAQDDLVNKMKEDAMXELLNISSNHHEYRNLLKELVVQ 140 N +R+KVL+A+DDL+ + +A L+ + + Y+ LL LV+Q Sbjct: 79 NQARLKVLRARDDLITDLLNEAKQRLMKVVKDTTRYQVLLDGLVLQ 124
>VATE_HUMAN (P36543) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) (V-ATPase 31 kDa subunit) (P31) Length = 226 Score = 34.7 bits (78), Expect = 0.075 Identities = 17/46 (36%), Positives = 28/46 (60%) Frame = +3 Query: 3 NASRIKVLQAQDDLVNKMKEDAMXELLNISSNHHEYRNLLKELVVQ 140 N +R+KVL+A+DDL+ + +A L + + Y+ LL LV+Q Sbjct: 77 NQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122
>VATE_BOVIN (P11019) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) (V-ATPase 31 kDa subunit) (P31) Length = 226 Score = 34.7 bits (78), Expect = 0.075 Identities = 17/46 (36%), Positives = 28/46 (60%) Frame = +3 Query: 3 NASRIKVLQAQDDLVNKMKEDAMXELLNISSNHHEYRNLLKELVVQ 140 N +R+KVL+A+DDL+ + +A L + + Y+ LL LV+Q Sbjct: 77 NQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122
>VATE_YEAST (P22203) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E| subunit) (Vacuolar proton pump E subunit) (V-ATPase 27 kDa subunit) Length = 232 Score = 34.7 bits (78), Expect = 0.075 Identities = 15/46 (32%), Positives = 30/46 (65%) Frame = +3 Query: 3 NASRIKVLQAQDDLVNKMKEDAMXELLNISSNHHEYRNLLKELVVQ 140 N R+KVL A++ ++ + E+ +L I++N EY+ +L+ L+V+ Sbjct: 81 NKMRLKVLSAREQSLDGIFEETKEKLSGIANNRDEYKPILQSLIVE 126 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,174,716 Number of Sequences: 219361 Number of extensions: 218423 Number of successful extensions: 725 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 720 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 725 length of database: 80,573,946 effective HSP length: 22 effective length of database: 75,748,004 effective search space used: 1817952096 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
