| Clone Name | basd25d22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_193821.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 312 Score = 299 bits (151), Expect = 6e-78 Identities = 256/291 (87%) Strand = Plus / Plus Query: 85 gcggggcagcgggcggtggtgatcttcggcatgagctcctgctgcatgtgccacacggtg 144 |||| |||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| Sbjct: 22 gcggcgcagcgggcggtggtgatcttcagcatgagctcgtgctgcatgtgccacaccgtg 81 Query: 145 acgagcctcctccgggatctcggggccaacccgatggtagtggaactggacgaggaccct 204 ||| ||||| || | || ||||||| ||||||| ||| ||||| |||||||||||||| Sbjct: 82 acgcgcctcttctgcgagctcggggtgaacccgacggtggtggagctggacgaggacccg 141 Query: 205 agggggaaggagatggagaaggcgctggtgcggctccttggccggaaccctgctgtgccg 264 |||||||||||||||||||||||||||| | ||||||| ||||| | ||| || |||||| Sbjct: 142 agggggaaggagatggagaaggcgctggcgaggctcctcggccgcagccccgccgtgccg 201 Query: 265 gtggtgttcatcggcggcaggctcgccggatgcaccgacaaggtcatgtcccttcacctc 324 | ||||||||||||||| ||||||| ||| | |||||||||||||||||| || |||||| Sbjct: 202 gcggtgttcatcggcgggaggctcgtcggctccaccgacaaggtcatgtcgctgcacctc 261 Query: 325 ggcggcaagcttgtcccgctgcttcgtaatgcaggtgctgtctgggtgtag 375 ||||||| ||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 262 agcggcaaccttgtcccgctgcttcgcaatgcgggtgccctctgggtgtag 312
>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0560B06 Length = 161720 Score = 299 bits (151), Expect = 6e-78 Identities = 256/291 (87%) Strand = Plus / Plus Query: 85 gcggggcagcgggcggtggtgatcttcggcatgagctcctgctgcatgtgccacacggtg 144 |||| |||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| Sbjct: 122864 gcggcgcagcgggcggtggtgatcttcagcatgagctcgtgctgcatgtgccacaccgtg 122923 Query: 145 acgagcctcctccgggatctcggggccaacccgatggtagtggaactggacgaggaccct 204 ||| ||||| || | || ||||||| ||||||| ||| ||||| |||||||||||||| Sbjct: 122924 acgcgcctcttctgcgagctcggggtgaacccgacggtggtggagctggacgaggacccg 122983 Query: 205 agggggaaggagatggagaaggcgctggtgcggctccttggccggaaccctgctgtgccg 264 |||||||||||||||||||||||||||| | ||||||| ||||| | ||| || |||||| Sbjct: 122984 agggggaaggagatggagaaggcgctggcgaggctcctcggccgcagccccgccgtgccg 123043 Query: 265 gtggtgttcatcggcggcaggctcgccggatgcaccgacaaggtcatgtcccttcacctc 324 | ||||||||||||||| ||||||| ||| | |||||||||||||||||| || |||||| Sbjct: 123044 gcggtgttcatcggcgggaggctcgtcggctccaccgacaaggtcatgtcgctgcacctc 123103 Query: 325 ggcggcaagcttgtcccgctgcttcgtaatgcaggtgctgtctgggtgtag 375 ||||||| ||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 123104 agcggcaaccttgtcccgctgcttcgcaatgcgggtgccctctgggtgtag 123154
>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete Sequence, complete sequence Length = 105198 Score = 299 bits (151), Expect = 6e-78 Identities = 256/291 (87%) Strand = Plus / Plus Query: 85 gcggggcagcgggcggtggtgatcttcggcatgagctcctgctgcatgtgccacacggtg 144 |||| |||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| Sbjct: 60475 gcggcgcagcgggcggtggtgatcttcagcatgagctcgtgctgcatgtgccacaccgtg 60534 Query: 145 acgagcctcctccgggatctcggggccaacccgatggtagtggaactggacgaggaccct 204 ||| ||||| || | || ||||||| ||||||| ||| ||||| |||||||||||||| Sbjct: 60535 acgcgcctcttctgcgagctcggggtgaacccgacggtggtggagctggacgaggacccg 60594 Query: 205 agggggaaggagatggagaaggcgctggtgcggctccttggccggaaccctgctgtgccg 264 |||||||||||||||||||||||||||| | ||||||| ||||| | ||| || |||||| Sbjct: 60595 agggggaaggagatggagaaggcgctggcgaggctcctcggccgcagccccgccgtgccg 60654 Query: 265 gtggtgttcatcggcggcaggctcgccggatgcaccgacaaggtcatgtcccttcacctc 324 | ||||||||||||||| ||||||| ||| | |||||||||||||||||| || |||||| Sbjct: 60655 gcggtgttcatcggcgggaggctcgtcggctccaccgacaaggtcatgtcgctgcacctc 60714 Query: 325 ggcggcaagcttgtcccgctgcttcgtaatgcaggtgctgtctgggtgtag 375 ||||||| ||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 60715 agcggcaaccttgtcccgctgcttcgcaatgcgggtgccctctgggtgtag 60765
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 299 bits (151), Expect = 6e-78 Identities = 256/291 (87%) Strand = Plus / Plus Query: 85 gcggggcagcgggcggtggtgatcttcggcatgagctcctgctgcatgtgccacacggtg 144 |||| |||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| Sbjct: 15106812 gcggcgcagcgggcggtggtgatcttcagcatgagctcgtgctgcatgtgccacaccgtg 15106871 Query: 145 acgagcctcctccgggatctcggggccaacccgatggtagtggaactggacgaggaccct 204 ||| ||||| || | || ||||||| ||||||| ||| ||||| |||||||||||||| Sbjct: 15106872 acgcgcctcttctgcgagctcggggtgaacccgacggtggtggagctggacgaggacccg 15106931 Query: 205 agggggaaggagatggagaaggcgctggtgcggctccttggccggaaccctgctgtgccg 264 |||||||||||||||||||||||||||| | ||||||| ||||| | ||| || |||||| Sbjct: 15106932 agggggaaggagatggagaaggcgctggcgaggctcctcggccgcagccccgccgtgccg 15106991 Query: 265 gtggtgttcatcggcggcaggctcgccggatgcaccgacaaggtcatgtcccttcacctc 324 | ||||||||||||||| ||||||| ||| | |||||||||||||||||| || |||||| Sbjct: 15106992 gcggtgttcatcggcgggaggctcgtcggctccaccgacaaggtcatgtcgctgcacctc 15107051 Query: 325 ggcggcaagcttgtcccgctgcttcgtaatgcaggtgctgtctgggtgtag 375 ||||||| ||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 15107052 agcggcaaccttgtcccgctgcttcgcaatgcgggtgccctctgggtgtag 15107102 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 271 ttcatcggcggcaggctcgccggatgcaccgacaaggtcatgtcccttcacctcggcggc 330 ||||||||||||| ||||| ||| ||||||| |||||||||| || ||||||| |||| Sbjct: 41082872 ttcatcggcggcaagctcgtcgggcccaccgaccaggtcatgtcgctccacctcgccggc 41082931 Query: 331 aagcttgtcccgct 344 ||||| |||||||| Sbjct: 41082932 aagctcgtcccgct 41082945 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 90 gcagcgggcggtggtgatcttcggcatgagctcctgctgcatgtgccac 138 |||| ||||||||||||||||||| |||| ||||| |||||||||| Sbjct: 41082691 gcagagggcggtggtgatcttcggggcgagcaactgcttcatgtgccac 41082739 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ctagaagtctagaactacta 53 |||||||||||||||||||| Sbjct: 6425231 ctagaagtctagaactacta 6425250
>dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0784G04 Length = 157458 Score = 299 bits (151), Expect = 6e-78 Identities = 256/291 (87%) Strand = Plus / Plus Query: 85 gcggggcagcgggcggtggtgatcttcggcatgagctcctgctgcatgtgccacacggtg 144 |||| |||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| Sbjct: 146004 gcggcgcagcgggcggtggtgatcttcagcatgagctcgtgctgcatgtgccacaccgtg 146063 Query: 145 acgagcctcctccgggatctcggggccaacccgatggtagtggaactggacgaggaccct 204 ||| ||||| || | || ||||||| ||||||| ||| ||||| |||||||||||||| Sbjct: 146064 acgcgcctcttctgcgagctcggggtgaacccgacggtggtggagctggacgaggacccg 146123 Query: 205 agggggaaggagatggagaaggcgctggtgcggctccttggccggaaccctgctgtgccg 264 |||||||||||||||||||||||||||| | ||||||| ||||| | ||| || |||||| Sbjct: 146124 agggggaaggagatggagaaggcgctggcgaggctcctcggccgcagccccgccgtgccg 146183 Query: 265 gtggtgttcatcggcggcaggctcgccggatgcaccgacaaggtcatgtcccttcacctc 324 | ||||||||||||||| ||||||| ||| | |||||||||||||||||| || |||||| Sbjct: 146184 gcggtgttcatcggcgggaggctcgtcggctccaccgacaaggtcatgtcgctgcacctc 146243 Query: 325 ggcggcaagcttgtcccgctgcttcgtaatgcaggtgctgtctgggtgtag 375 ||||||| ||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 146244 agcggcaaccttgtcccgctgcttcgcaatgcgggtgccctctgggtgtag 146294
>dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1329D01 Length = 141938 Score = 299 bits (151), Expect = 6e-78 Identities = 256/291 (87%) Strand = Plus / Plus Query: 85 gcggggcagcgggcggtggtgatcttcggcatgagctcctgctgcatgtgccacacggtg 144 |||| |||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| Sbjct: 133059 gcggcgcagcgggcggtggtgatcttcagcatgagctcgtgctgcatgtgccacaccgtg 133118 Query: 145 acgagcctcctccgggatctcggggccaacccgatggtagtggaactggacgaggaccct 204 ||| ||||| || | || ||||||| ||||||| ||| ||||| |||||||||||||| Sbjct: 133119 acgcgcctcttctgcgagctcggggtgaacccgacggtggtggagctggacgaggacccg 133178 Query: 205 agggggaaggagatggagaaggcgctggtgcggctccttggccggaaccctgctgtgccg 264 |||||||||||||||||||||||||||| | ||||||| ||||| | ||| || |||||| Sbjct: 133179 agggggaaggagatggagaaggcgctggcgaggctcctcggccgcagccccgccgtgccg 133238 Query: 265 gtggtgttcatcggcggcaggctcgccggatgcaccgacaaggtcatgtcccttcacctc 324 | ||||||||||||||| ||||||| ||| | |||||||||||||||||| || |||||| Sbjct: 133239 gcggtgttcatcggcgggaggctcgtcggctccaccgacaaggtcatgtcgctgcacctc 133298 Query: 325 ggcggcaagcttgtcccgctgcttcgtaatgcaggtgctgtctgggtgtag 375 ||||||| ||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 133299 agcggcaaccttgtcccgctgcttcgcaatgcgggtgccctctgggtgtag 133349
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0043B10 Length = 167399 Score = 299 bits (151), Expect = 6e-78 Identities = 256/291 (87%) Strand = Plus / Plus Query: 85 gcggggcagcgggcggtggtgatcttcggcatgagctcctgctgcatgtgccacacggtg 144 |||| |||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| Sbjct: 78778 gcggcgcagcgggcggtggtgatcttcagcatgagctcgtgctgcatgtgccacaccgtg 78837 Query: 145 acgagcctcctccgggatctcggggccaacccgatggtagtggaactggacgaggaccct 204 ||| ||||| || | || ||||||| ||||||| ||| ||||| |||||||||||||| Sbjct: 78838 acgcgcctcttctgcgagctcggggtgaacccgacggtggtggagctggacgaggacccg 78897 Query: 205 agggggaaggagatggagaaggcgctggtgcggctccttggccggaaccctgctgtgccg 264 |||||||||||||||||||||||||||| | ||||||| ||||| | ||| || |||||| Sbjct: 78898 agggggaaggagatggagaaggcgctggcgaggctcctcggccgcagccccgccgtgccg 78957 Query: 265 gtggtgttcatcggcggcaggctcgccggatgcaccgacaaggtcatgtcccttcacctc 324 | ||||||||||||||| ||||||| ||| | |||||||||||||||||| || |||||| Sbjct: 78958 gcggtgttcatcggcgggaggctcgtcggctccaccgacaaggtcatgtcgctgcacctc 79017 Query: 325 ggcggcaagcttgtcccgctgcttcgtaatgcaggtgctgtctgggtgtag 375 ||||||| ||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 79018 agcggcaaccttgtcccgctgcttcgcaatgcgggtgccctctgggtgtag 79068
>dbj|AK107858.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B04, full insert sequence Length = 766 Score = 299 bits (151), Expect = 6e-78 Identities = 256/291 (87%) Strand = Plus / Plus Query: 85 gcggggcagcgggcggtggtgatcttcggcatgagctcctgctgcatgtgccacacggtg 144 |||| |||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| Sbjct: 203 gcggcgcagcgggcggtggtgatcttcagcatgagctcgtgctgcatgtgccacaccgtg 262 Query: 145 acgagcctcctccgggatctcggggccaacccgatggtagtggaactggacgaggaccct 204 ||| ||||| || | || ||||||| ||||||| ||| ||||| |||||||||||||| Sbjct: 263 acgcgcctcttctgcgagctcggggtgaacccgacggtggtggagctggacgaggacccg 322 Query: 205 agggggaaggagatggagaaggcgctggtgcggctccttggccggaaccctgctgtgccg 264 |||||||||||||||||||||||||||| | ||||||| ||||| | ||| || |||||| Sbjct: 323 agggggaaggagatggagaaggcgctggcgaggctcctcggccgcagccccgccgtgccg 382 Query: 265 gtggtgttcatcggcggcaggctcgccggatgcaccgacaaggtcatgtcccttcacctc 324 | ||||||||||||||| ||||||| ||| | |||||||||||||||||| || |||||| Sbjct: 383 gcggtgttcatcggcgggaggctcgtcggctccaccgacaaggtcatgtcgctgcacctc 442 Query: 325 ggcggcaagcttgtcccgctgcttcgtaatgcaggtgctgtctgggtgtag 375 ||||||| ||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 443 agcggcaaccttgtcccgctgcttcgcaatgcgggtgccctctgggtgtag 493
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 92 agcgggcggtggtgatcttcggcatgagctcctgctgcatgtgccacacggtgacgagcc 151 |||| ||||||||||||||| | ||||||| ||||||||||||||||| ||||| ||| Sbjct: 21502945 agcgtgcggtggtgatcttcaccttgagctcatgctgcatgtgccacaccgtgacacgcc 21503004 Query: 152 tcctccgggatctcggggccaacccgatggtagtggaactggacgaggaccctaggggga 211 || || | |||||||| | |||| || | || || |||||| | ||||||||||| | Sbjct: 21503005 tcttctgtgatctcggtgtcaacgcgctagtgcatgagctggaccaagaccctaggggca 21503064 Query: 212 aggagatggaga 223 |||||||||||| Sbjct: 21503065 aggagatggaga 21503076
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 92 agcgggcggtggtgatcttcggcatgagctcctgctgcatgtgccacacggtgacgagcc 151 |||| ||||||||||||||| | ||||||| ||||||||||||||||| ||||| ||| Sbjct: 21431266 agcgtgcggtggtgatcttcaccttgagctcatgctgcatgtgccacaccgtgacacgcc 21431325 Query: 152 tcctccgggatctcggggccaacccgatggtagtggaactggacgaggaccctaggggga 211 || || | |||||||| | |||| || | || || |||||| | ||||||||||| | Sbjct: 21431326 tcttctgtgatctcggtgtcaacgcgctagtgcatgagctggaccaagaccctaggggca 21431385 Query: 212 aggagatggaga 223 |||||||||||| Sbjct: 21431386 aggagatggaga 21431397
>emb|AL844497.4|CNS08CAU Oryza sativa chromosome 12, . BAC OSJNBa0085B23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158019 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Minus Query: 92 agcgggcggtggtgatcttcggcatgagctcctgctgcatgtgccacacggtgacgagcc 151 |||| ||||||||||||||| | ||||||| ||||||||||||||||| ||||| ||| Sbjct: 142944 agcgtgcggtggtgatcttcaccttgagctcatgctgcatgtgccacaccgtgacacgcc 142885 Query: 152 tcctccgggatctcggggccaacccgatggtagtggaactggacgaggaccctaggggga 211 || || | |||||||| | |||| || | || || |||||| | ||||||||||| | Sbjct: 142884 tcttctgtgatctcggtgtcaacgcgctagtgcatgagctggaccaagaccctaggggca 142825 Query: 212 aggagatggaga 223 |||||||||||| Sbjct: 142824 aggagatggaga 142813
>ref|NM_190062.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 378 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 271 ttcatcggcggcaggctcgccggatgcaccgacaaggtcatgtcccttcacctcggcggc 330 ||||||||||||| ||||| ||| ||||||| |||||||||| || ||||||| |||| Sbjct: 211 ttcatcggcggcaagctcgtcgggcccaccgaccaggtcatgtcgctccacctcgccggc 270 Query: 331 aagcttgtcccgct 344 ||||| |||||||| Sbjct: 271 aagctcgtcccgct 284 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 90 gcagcgggcggtggtgatcttcggcatgagctcctgctgcatgtgccac 138 |||| ||||||||||||||||||| |||| ||||| |||||||||| Sbjct: 30 gcagagggcggtggtgatcttcggggcgagcaactgcttcatgtgccac 78
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 271 ttcatcggcggcaggctcgccggatgcaccgacaaggtcatgtcccttcacctcggcggc 330 ||||||||||||| ||||| ||| ||||||| |||||||||| || ||||||| |||| Sbjct: 119802 ttcatcggcggcaagctcgtcgggcccaccgaccaggtcatgtcgctccacctcgccggc 119861 Query: 331 aagcttgtcccgct 344 ||||| |||||||| Sbjct: 119862 aagctcgtcccgct 119875 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 90 gcagcgggcggtggtgatcttcggcatgagctcctgctgcatgtgccac 138 |||| ||||||||||||||||||| |||| ||||| |||||||||| Sbjct: 119621 gcagagggcggtggtgatcttcggggcgagcaactgcttcatgtgccac 119669
>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04, complete sequence Length = 88812 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 268 gtgttcatcggcggcaggctcgccggatgcaccgacaaggtcatgtcccttcacctcggc 327 |||||||||||||||||||||| ||| | ||||||| ||||||||| || ||| ||| | Sbjct: 77454 gtgttcatcggcggcaggctcgtcggctccaccgaccgggtcatgtcgctccacgtcgcc 77395 Query: 328 ggcaagcttgtcccgct 344 ||| ||||||||||| Sbjct: 77394 ggcggccttgtcccgct 77378
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 268 gtgttcatcggcggcaggctcgccggatgcaccgacaaggtcatgtcccttcacctcggc 327 |||||||||||||||||||||| ||| | ||||||| ||||||||| || ||| ||| | Sbjct: 68442 gtgttcatcggcggcaggctcgtcggctccaccgaccgggtcatgtcgctccacgtcgcc 68501 Query: 328 ggcaagcttgtcccgct 344 ||| ||||||||||| Sbjct: 68502 ggcggccttgtcccgct 68518
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 268 gtgttcatcggcggcaggctcgccggatgcaccgacaaggtcatgtcccttcacctcggc 327 |||||||||||||||||||||| ||| | ||||||| ||||||||| || ||| ||| | Sbjct: 2799128 gtgttcatcggcggcaggctcgtcggctccaccgaccgggtcatgtcgctccacgtcgcc 2799069 Query: 328 ggcaagcttgtcccgct 344 ||| ||||||||||| Sbjct: 2799068 ggcggccttgtcccgct 2799052 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 ggcagcgggcggtggtgatcttcg 112 ||||||||||||||||||| |||| Sbjct: 1856845 ggcagcgggcggtggtgattttcg 1856868
>dbj|AK119376.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-A09, full insert sequence Length = 2934 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 268 gtgttcatcggcggcaggctcgccggatgcaccgacaaggtcatgtcccttcacctcggc 327 |||||||||||||||||||||| ||| | ||||||| ||||||||| || ||| ||| | Sbjct: 2245 gtgttcatcggcggcaggctcgtcggctccaccgaccgggtcatgtcgctccacgtcgcc 2186 Query: 328 ggcaagcttgtcccgct 344 ||| ||||||||||| Sbjct: 2185 ggcggccttgtcccgct 2169
>ref|NM_111066.2| Arabidopsis thaliana ROXY1; electron transporter/ thiol-disulfide exchange intermediate AT3G02000 (ROXY1) mRNA, complete cds Length = 711 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 97 gcggtggtgatcttcggcatgagctcctgctgcatgtgccac 138 ||||||||||||||| || ||||| | ||||||||||||||| Sbjct: 181 gcggtggtgatcttcagcgtgagcacgtgctgcatgtgccac 222
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia Length = 211009 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 584 tattccttatgtaaactaatataagatcttttagatca 621 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 29824 tattccctctgtaaactaatataagaccttttagatca 29787 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| ||||||||||| Sbjct: 29749 tgtaaactaatataagaccttttagatca 29777
>gb|AY270159.1| Triticum aestivum resistance protein T10rga2-1A gene, complete cds Length = 4768 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 584 tattccttatgtaaactaatataagatcttttagatca 621 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 1106 tattccctctgtaaactaatataagaccttttagatca 1143 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| ||||||||||| Sbjct: 1180 tgtaaactaatataagaccttttagatca 1152
>gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BAC F1C9 genomic sequence, complete sequence Length = 103960 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 97 gcggtggtgatcttcggcatgagctcctgctgcatgtgccac 138 ||||||||||||||| || ||||| | ||||||||||||||| Sbjct: 76532 gcggtggtgatcttcagcgtgagcacgtgctgcatgtgccac 76573
>gb|AC010797.4|ATAC010797 Arabidopsis thaliana chromosome III BAC F28J7 genomic sequence, complete sequence Length = 89154 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 97 gcggtggtgatcttcggcatgagctcctgctgcatgtgccac 138 ||||||||||||||| || ||||| | ||||||||||||||| Sbjct: 77504 gcggtggtgatcttcagcgtgagcacgtgctgcatgtgccac 77463
>gb|AF458280.1| Triticum urartu isolate Tu11498 rga2 protein (rga2) gene, partial cds Length = 1437 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 584 tattccttatgtaaactaatataagatcttttagatca 621 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 192 tattccctctgtaaactaatataagaccttttagatca 229 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| ||||||||||| Sbjct: 266 tgtaaactaatataagaccttttagatca 238
>gb|AF458279.1| Triticum monococcum isolate Tm896 rga2 protein (rga2) gene, partial cds Length = 1438 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 584 tattccttatgtaaactaatataagatcttttagatca 621 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 192 tattccctctgtaaactaatataagaccttttagatca 229 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| ||||||||||| Sbjct: 267 tgtaaactaatataagaccttttagatca 239
>gb|AF458278.1| Triticum monococcum isolate Tm13010 rga2 protein (rga2) gene, partial cds Length = 1439 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 584 tattccttatgtaaactaatataagatcttttagatca 621 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 192 tattccctctgtaaactaatataagaccttttagatca 229 Score = 42.1 bits (21), Expect = 2.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| ||||||||||| Sbjct: 266 tgtaaactaatataaga-cttttagatca 239
>gb|AF458277.1| Triticum turgidum subsp. dicoccoides isolate Td9803 rga2 protein (rga2) gene, partial cds Length = 1441 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 584 tattccttatgtaaactaatataagatcttttagatca 621 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 192 tattccctctgtaaactaatataagaccttttagatca 229 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| ||||||||||| Sbjct: 269 tgtaaactaatataagaccttttagatca 241
>gb|AF458276.1| Triticum turgidum subsp. dicoccoides isolate Td4467 rga2 protein (rga2) gene, partial cds Length = 1436 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 584 tattccttatgtaaactaatataagatcttttagatca 621 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 192 tattccctctgtaaactaatataagaccttttagatca 229 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| ||||||||||| Sbjct: 266 tgtaaactaatataagaccttttagatca 238
>gb|AF458275.1| Triticum turgidum subsp. durum isolate Langdon rga2 protein (rga2) gene, partial cds Length = 1438 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 584 tattccttatgtaaactaatataagatcttttagatca 621 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 192 tattccctctgtaaactaatataagaccttttagatca 229 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| ||||||||||| Sbjct: 266 tgtaaactaatataagaccttttagatca 238
>gb|AF458273.1| Triticum aestivum isolate ThLr101A rga2 protein (rga2) gene, partial cds Length = 1438 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 584 tattccttatgtaaactaatataagatcttttagatca 621 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 192 tattccctctgtaaactaatataagaccttttagatca 229 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| ||||||||||| Sbjct: 266 tgtaaactaatataagaccttttagatca 238
>gb|AF458272.1| Triticum aestivum isolate Weique rga2 protein (rga2) gene, partial cds Length = 1435 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 584 tattccttatgtaaactaatataagatcttttagatca 621 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 192 tattccctctgtaaactaatataagaccttttagatca 229 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| ||||||||||| Sbjct: 266 tgtaaactaatataagaccttttagatca 238
>gb|AF458271.1| Triticum aestivum isolate Tesia rga2 protein (rga2) gene, partial cds Length = 1438 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 584 tattccttatgtaaactaatataagatcttttagatca 621 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 192 tattccctctgtaaactaatataagaccttttagatca 229 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| ||||||||||| Sbjct: 266 tgtaaactaatataagaccttttagatca 238
>gb|AF458270.1| Triticum aestivum isolate Pavon rga2 protein (rga2) gene, partial cds Length = 1438 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 584 tattccttatgtaaactaatataagatcttttagatca 621 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 192 tattccctctgtaaactaatataagaccttttagatca 229 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| ||||||||||| Sbjct: 266 tgtaaactaatataagaccttttagatca 238
>gb|AF458269.1| Triticum aestivum isolate Opata rga2 protein (rga2) gene, partial cds Length = 1437 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 584 tattccttatgtaaactaatataagatcttttagatca 621 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 192 tattccctctgtaaactaatataagaccttttagatca 229 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| ||||||||||| Sbjct: 266 tgtaaactaatataagaccttttagatca 238
>gb|AF458268.1| Triticum aestivum isolate Nocazari rga2 protein (rga2) gene, partial cds Length = 1437 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 584 tattccttatgtaaactaatataagatcttttagatca 621 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 191 tattccctctgtaaactaatataagaccttttagatca 228 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| ||||||||||| Sbjct: 265 tgtaaactaatataagaccttttagatca 237
>gb|AF458267.1| Triticum aestivum isolate Galvez rga2 protein (rga2) gene, partial cds Length = 1436 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 584 tattccttatgtaaactaatataagatcttttagatca 621 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 191 tattccctctgtaaactaatataagaccttttagatca 228 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| ||||||||||| Sbjct: 265 tgtaaactaatataagaccttttagatca 237
>gb|AF458266.1| Triticum aestivum isolate Esmer rga2 protein (rga2) gene, partial cds Length = 1437 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 584 tattccttatgtaaactaatataagatcttttagatca 621 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 192 tattccctctgtaaactaatataagaccttttagatca 229 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| ||||||||||| Sbjct: 266 tgtaaactaatataagaccttttagatca 238
>gb|BT024760.1| Arabidopsis thaliana At3g02000 mRNA, complete cds Length = 411 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 97 gcggtggtgatcttcggcatgagctcctgctgcatgtgccac 138 ||||||||||||||| || ||||| | ||||||||||||||| Sbjct: 118 gcggtggtgatcttcagcgtgagcacgtgctgcatgtgccac 159
>emb|BX825944.1|CNS0A69T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZG07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 710 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 97 gcggtggtgatcttcggcatgagctcctgctgcatgtgccac 138 ||||||||||||||| || ||||| | ||||||||||||||| Sbjct: 181 gcggtggtgatcttcagcgtgagcacgtgctgcatgtgccac 222
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 584 tattccttatgtaaactaatataagatcttttagatca 621 |||||| | ||||||||||||||||| ||||||||||| Sbjct: 47578 tattccctctgtaaactaatataagaccttttagatca 47541 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| ||||||||||| Sbjct: 47504 tgtaaactaatataagaccttttagatca 47532
>gb|AY910752.1| Arabidopsis thaliana glutaredoxin (ROXY1) mRNA, complete cds Length = 731 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 97 gcggtggtgatcttcggcatgagctcctgctgcatgtgccac 138 ||||||||||||||| || ||||| | ||||||||||||||| Sbjct: 218 gcggtggtgatcttcagcgtgagcacgtgctgcatgtgccac 259
>gb|U63815.1|ATU63815 Arabidopsis thaliana AT.I.24-1, AT.I.24-2, AT.I.24-3, AT.I.24-4, AT.I.24-5, AT.I.24-6, AT.I.24-9 and AT.I.24-14 genes, partial cds, AT.I.24-7, ascorbate peroxidase (ATHAPX1), EF-1alpha-A1, -A2 and -A3 (EF-1alpha) and AT.I.24-13 genes, complete cds Length = 63093 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 97 gcggtggtgatcttcggcatgagctcctgctgcatgtgccac 138 ||||||||||||||| || ||||| | ||||||||||||||| Sbjct: 6332 gcggtggtgatcttcagcgtgagcacgtgctgcatgtgccac 6373
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 597 aactaatataagatcttttagatca 621 ||||||||||||||||||||||||| Sbjct: 150434 aactaatataagatcttttagatca 150410
>gb|DQ295068.1| Secale cereale PKABA1 gene, partial sequence Length = 1082 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| ||||||||||| Sbjct: 1017 tgtaaactaatataagagcttttagatca 989
>gb|BC072869.1| Xenopus laevis MGC80278 protein, mRNA (cDNA clone MGC:80278 IMAGE:5073408), complete cds Length = 1222 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 210 gaaggagatggagaaggcgctggtgcg 236 ||||||||||||| ||||||||||||| Sbjct: 1025 gaaggagatggaggaggcgctggtgcg 1051
>gb|AC120888.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0485F09, complete sequence Length = 161276 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 123 ctgctgcatgtgccacacggtgacgagcctcctc 156 |||| ||||||||||| | ||||||||||||||| Sbjct: 8799 ctgcggcatgtgccacgccgtgacgagcctcctc 8832
>gb|AC129224.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0029P13, complete sequence Length = 158506 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 123 ctgctgcatgtgccacacggtgacgagcctcctc 156 |||| ||||||||||| | ||||||||||||||| Sbjct: 128921 ctgcggcatgtgccacgccgtgacgagcctcctc 128954
>gb|AC121900.2| Mus musculus BAC clone RP24-167E15 from 7, complete sequence Length = 170266 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 205 agggggaaggagatggagaagg 226 |||||||||||||||||||||| Sbjct: 143627 agggggaaggagatggagaagg 143606
>gb|AC084390.1| Mus musculus BAC clone RP23-285H9 from 1, complete sequence Length = 177050 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 205 agggggaaggagatggagaagg 226 |||||||||||||||||||||| Sbjct: 137092 agggggaaggagatggagaagg 137113
>gb|AF345526.1| TT virus isolate TCHN-A Orf2 and Orf1 genes, complete cds Length = 3312 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 213 ggagatggagaaggcgctggtg 234 |||||||||||||||||||||| Sbjct: 498 ggagatggagaaggcgctggtg 519
>gb|AF315077.1|AF315077 TTV-like virus DXL2 unknown genes Length = 3309 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 213 ggagatggagaaggcgctggtg 234 |||||||||||||||||||||| Sbjct: 493 ggagatggagaaggcgctggtg 514
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 323 tcggcggcaagcttgtcccgct 344 |||||||||||||||||||||| Sbjct: 2009676 tcggcggcaagcttgtcccgct 2009655
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 123 ctgctgcatgtgccacacggtgacgagcctcctc 156 |||| ||||||||||| | ||||||||||||||| Sbjct: 25401908 ctgcggcatgtgccacgccgtgacgagcctcctc 25401941
>dbj|AB053225.2| Mus musculus GnT-IVa gene for N-acetylglucosaminyltransferase IVa, complete cds Length = 44184 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 205 agggggaaggagatggagaagg 226 |||||||||||||||||||||| Sbjct: 33289 agggggaaggagatggagaagg 33268
>gb|AY957389.1| Pseudomonas stutzeri NorR (norR) gene, complete cds; DnrN-like (dnrN) gene, complete sequence; DnrO (dnrO) and DnrD (dnrD) genes, complete cds; DnrP-like (dnrP) gene, complete sequence; and NorD (norD), NorB (norB), and NorC (norC) genes, complete cds Length = 8100 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 agctcctgctgcatgtgccaca 139 |||||||||||||||||||||| Sbjct: 2065 agctcctgctgcatgtgccaca 2044
>dbj|AK108017.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-H11, full insert sequence Length = 587 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 123 ctgctgcatgtgccacacggtgacgagcctcctc 156 |||| ||||||||||| | ||||||||||||||| Sbjct: 154 ctgcggcatgtgccacgccgtgacgagcctcctc 187
>gb|AF177978.1|AF177978 Streptococcus pyogenes serum opacity factor precursor (sof27G) gene, partial cds Length = 606 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 tcactagcactagcactagaag 40 |||||||||||||||||||||| Sbjct: 278 tcactagcactagcactagaag 257
>gb|AF139735.1|AF139735 Streptococcus pyogenes serum opacity factor precursor (sof2612) gene, partial cds Length = 591 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 tcactagcactagcactagaag 40 |||||||||||||||||||||| Sbjct: 275 tcactagcactagcactagaag 254
>gb|AF139734.1|AF139734 Streptococcus pyogenes serum opacity factor precursor (sof76) gene, partial cds Length = 591 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 tcactagcactagcactagaag 40 |||||||||||||||||||||| Sbjct: 275 tcactagcactagcactagaag 254
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 123 ctgctgcatgtgccacacggtgacgagcctcctc 156 |||| ||||||||||| | ||||||||||||||| Sbjct: 25720578 ctgcggcatgtgccacgccgtgacgagcctcctc 25720611
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 aatctcactagcactagcact 35 ||||||||||||||||||||| Sbjct: 495056 aatctcactagcactagcact 495076
>gb|AF347066.1| Triticum aestivum truncated sucrose-phosphate synthase 4 mRNA, partial cds Length = 2642 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 593 tgtaaactaatataagatcttttag 617 ||||||||||||||||||| ||||| Sbjct: 1438 tgtaaactaatataagatcatttag 1414
>emb|AJ302096.1|ASP302096 Aegilops speltoides Pina gene for puroindoline a, cultivar PI 393494 Length = 2570 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| | ||||||||| Sbjct: 1398 tgtaaactaatataagagcgtttagatca 1426
>emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene Length = 10815 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| | ||||||||| Sbjct: 7610 tgtaaactaatataagagcgtttagatca 7582
>emb|CR385069.8| Zebrafish DNA sequence from clone DKEY-22C20 in linkage group 13, complete sequence Length = 68470 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 tgaatctcactagcactagca 33 ||||||||||||||||||||| Sbjct: 59244 tgaatctcactagcactagca 59264
>gb|AY727564.1| Alkhurma virus isolate 9518 NS3 protein gene, partial cds Length = 713 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gaaggagatggagaaggcgct 230 ||||||||||||||||||||| Sbjct: 204 gaaggagatggagaaggcgct 224
>gb|AY727563.1| Alkhurma virus isolate 7586 NS3 protein gene, partial cds Length = 713 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gaaggagatggagaaggcgct 230 ||||||||||||||||||||| Sbjct: 204 gaaggagatggagaaggcgct 224
>gb|AY727562.1| Alkhurma virus isolate 7471 NS3 protein gene, partial cds Length = 713 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gaaggagatggagaaggcgct 230 ||||||||||||||||||||| Sbjct: 204 gaaggagatggagaaggcgct 224
>gb|AY727561.1| Alkhurma virus isolate 7466 NS3 protein gene, partial cds Length = 713 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gaaggagatggagaaggcgct 230 ||||||||||||||||||||| Sbjct: 204 gaaggagatggagaaggcgct 224
>gb|AY727559.1| Alkhurma virus isolate 5975 NS3 protein gene, partial cds Length = 713 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gaaggagatggagaaggcgct 230 ||||||||||||||||||||| Sbjct: 204 gaaggagatggagaaggcgct 224
>gb|AY727558.1| Alkhurma virus isolate 1209 NS3 protein gene, partial cds Length = 713 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gaaggagatggagaaggcgct 230 ||||||||||||||||||||| Sbjct: 204 gaaggagatggagaaggcgct 224
>gb|AY727557.1| Alkhurma virus isolate MOS NS3 protein gene, partial cds Length = 713 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gaaggagatggagaaggcgct 230 ||||||||||||||||||||| Sbjct: 204 gaaggagatggagaaggcgct 224
>gb|AY727556.1| Alkhurma virus isolate 1176 NS3 protein gene, partial cds Length = 713 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gaaggagatggagaaggcgct 230 ||||||||||||||||||||| Sbjct: 204 gaaggagatggagaaggcgct 224
>gb|AY727555.1| Alkhurma virus isolate 228 NS3 protein gene, partial cds Length = 713 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gaaggagatggagaaggcgct 230 ||||||||||||||||||||| Sbjct: 204 gaaggagatggagaaggcgct 224
>gb|AY727554.1| Alkhurma virus isolate 87 NS3 protein gene, partial cds Length = 713 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gaaggagatggagaaggcgct 230 ||||||||||||||||||||| Sbjct: 204 gaaggagatggagaaggcgct 224
>gb|AF331718.1| Alkhurma virus strain 1176 polyprotein gene, complete cds Length = 10685 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gaaggagatggagaaggcgct 230 ||||||||||||||||||||| Sbjct: 5289 gaaggagatggagaaggcgct 5309
>emb|AJ400713.1|TAE400713 Triticum aestivum vp1B gene for VIVIPAROUS1, exons 1-6 Length = 4034 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 593 tgtaaactaatataagatcttttagatca 621 ||||||||||||||||| | ||||||||| Sbjct: 2786 tgtaaactaatataagagcatttagatca 2758
>ref|XM_312472.1| Anopheles gambiae str. PEST ENSANGP00000003057 (ENSANGG00000002505), partial mRNA Length = 2088 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 219 ggagaaggcgctggtgcggct 239 ||||||||||||||||||||| Sbjct: 864 ggagaaggcgctggtgcggct 884
>gb|AC092202.28| Mus musculus strain C57BL/6J chromosome 3 clone rp23-407b16, complete sequence Length = 196249 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 566 caacaaagacatgtaaaatat 586 ||||||||||||||||||||| Sbjct: 89419 caacaaagacatgtaaaatat 89439
>ref|NM_175261.2| Mus musculus RIKEN cDNA 5730596B20 gene (5730596B20Rik), mRNA Length = 3356 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ggggaaggagatggagaagg 226 |||||||||||||||||||| Sbjct: 2501 ggggaaggagatggagaagg 2520
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 594 gtaaactaatataagatcttttagatca 621 |||||||||||||||| | ||||||||| Sbjct: 6391 gtaaactaatataagagcgtttagatca 6364
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 594 gtaaactaatataagatcttttagatca 621 |||||||||||||||| | ||||||||| Sbjct: 754 gtaaactaatataagagcgtttagatca 781
>gb|AC161480.9| Mus musculus chromosome 15, clone RP23-404I10, complete sequence Length = 187202 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 aacaaagacatgtaaaatat 586 |||||||||||||||||||| Sbjct: 128323 aacaaagacatgtaaaatat 128342
>gb|AC118288.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077L08, complete sequence Length = 115640 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 ggcagcgggcggtggtgatcttcg 112 ||||||||||||||||||| |||| Sbjct: 35619 ggcagcgggcggtggtgattttcg 35642
>ref|XM_424679.1| PREDICTED: Gallus gallus similar to Ig V-region-like B-G antigen 11/4 precursor - chicken (LOC427085), partial mRNA Length = 1792 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ggggaaggagatggagaagg 226 |||||||||||||||||||| Sbjct: 149 ggggaaggagatggagaagg 130
>ref|XM_600341.2| PREDICTED: Bos taurus similar to small optic lobes (LOC522068), mRNA Length = 3204 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 cggggcagcgggcggtggtg 105 |||||||||||||||||||| Sbjct: 1288 cggggcagcgggcggtggtg 1269
>gb|AC148009.3| Mus musculus BAC clone RP23-227B20 from chromosome 19, complete sequence Length = 201209 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 gggggaaggagatggagaag 225 |||||||||||||||||||| Sbjct: 111791 gggggaaggagatggagaag 111810
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 atcggcggcaggctcgccgg 293 |||||||||||||||||||| Sbjct: 447237 atcggcggcaggctcgccgg 447218
>ref|XM_656299.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3787.2), mRNA Length = 1326 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tagggggaaggagatggaga 223 |||||||||||||||||||| Sbjct: 170 tagggggaaggagatggaga 151
>gb|AY553259.1| Hordeum murinum isolate Hor_mur phosphoenolpyruvate carboxylase (pepC) gene, exons 1, 2 and partial cds Length = 1117 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 594 gtaaactaatataagatcttttagatca 621 |||||||||||||||| | ||||||||| Sbjct: 604 gtaaactaatataagagcatttagatca 577
>gb|AC099621.12| Mus musculus chromosome 15, clone RP23-468J2, complete sequence Length = 178810 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 catgtgcatgggagggcttt 397 |||||||||||||||||||| Sbjct: 143478 catgtgcatgggagggcttt 143459
>gb|AC139940.5| Mus musculus chromosome 15, clone RP23-468K16, complete sequence Length = 212183 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 aacaaagacatgtaaaatat 586 |||||||||||||||||||| Sbjct: 4023 aacaaagacatgtaaaatat 4042
>gb|AC114551.12| Mus musculus chromosome 3, clone RP23-301O12, complete sequence Length = 189791 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 363 tgtctgggtgtagtgcatgtgcatggga 390 ||||||||||| |||| ||||||||||| Sbjct: 151796 tgtctgggtgtggtgcctgtgcatggga 151769
>gb|AC116656.5| Mus musculus BAC clone RP23-10A7 from chromosome 15, complete sequence Length = 198019 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 catgtgcatgggagggcttt 397 |||||||||||||||||||| Sbjct: 107922 catgtgcatgggagggcttt 107941
>gb|AC121610.2| Mus musculus BAC clone RP23-326L12 from 10, complete sequence Length = 192060 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 tactgtcctacaaacaacaa 571 |||||||||||||||||||| Sbjct: 144046 tactgtcctacaaacaacaa 144065
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 atcggcggcaggctcgccgg 293 |||||||||||||||||||| Sbjct: 257087 atcggcggcaggctcgccgg 257068
>emb|BX571657.1| Wolinella succinogenes, complete genome; segment 1/7 Length = 347961 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 aaggagatggagaaggcgct 230 |||||||||||||||||||| Sbjct: 228075 aaggagatggagaaggcgct 228094
>gb|AC121756.5| Homo sapiens 3 BAC RP11-455G2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 141000 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 caaagacatgtaaaatattc 588 |||||||||||||||||||| Sbjct: 116690 caaagacatgtaaaatattc 116709
>gb|AC148826.4| Pan troglodytes BAC clone CH251-484F13 from chromosome 7, complete sequence Length = 184163 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 ccagtgtaataactagttta 553 |||||||||||||||||||| Sbjct: 35062 ccagtgtaataactagttta 35043
>gb|AC084358.19| Homo sapiens 12p BAC RP11-418C2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169949 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 596 aaactaatataagatctttt 615 |||||||||||||||||||| Sbjct: 162125 aaactaatataagatctttt 162144
>dbj|AK051764.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130074O04 product:hypothetical protein, full insert sequence Length = 3356 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ggggaaggagatggagaagg 226 |||||||||||||||||||| Sbjct: 2501 ggggaaggagatggagaagg 2520
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 tgtgccggtggtgttcatcg 277 |||||||||||||||||||| Sbjct: 3081898 tgtgccggtggtgttcatcg 3081917
>gb|AC148318.3| Pan troglodytes BAC clone CH251-496K6 from chromosome 7, complete sequence Length = 194952 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 ccagtgtaataactagttta 553 |||||||||||||||||||| Sbjct: 10452 ccagtgtaataactagttta 10433
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ctagaagtctagaactacta 53 |||||||||||||||||||| Sbjct: 12361160 ctagaagtctagaactacta 12361141
>gb|AC008166.2| Homo sapiens BAC clone RP11-155J2 from 2, complete sequence Length = 176991 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 544 aactagtttactgtcctacaaaca 567 ||||||||||||||||||| |||| Sbjct: 111823 aactagtttactgtcctaccaaca 111800
>emb|BX005249.6| Zebrafish DNA sequence from clone CH211-188M4, complete sequence Length = 154305 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 564 aacaacaaagacatgtaaaatatt 587 ||||||||| |||||||||||||| Sbjct: 64776 aacaacaaacacatgtaaaatatt 64753
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665D10 Length = 134967 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ctagaagtctagaactacta 53 |||||||||||||||||||| Sbjct: 47626 ctagaagtctagaactacta 47645
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 ggccggaaccctgctgtgccggtggtgt 271 |||| |||||| |||||||||||||||| Sbjct: 1587951 ggcccgaacccggctgtgccggtggtgt 1587924
>dbj|AP004891.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0705A04 Length = 182468 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ctagaagtctagaactacta 53 |||||||||||||||||||| Sbjct: 41297 ctagaagtctagaactacta 41278
>gb|AC004534.1|AC004534 Homo sapiens PAC clone RP4-545C24 from 7q21-q22, complete sequence Length = 155952 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 ccagtgtaataactagttta 553 |||||||||||||||||||| Sbjct: 115782 ccagtgtaataactagttta 115801
>gb|AC015583.34| Mus musculus chromosome 6, clone RP23-329P9, complete sequence Length = 201379 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ggggaaggagatggagaagg 226 |||||||||||||||||||| Sbjct: 133370 ggggaaggagatggagaagg 133351
>dbj|AP000775.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-708B6, complete sequence Length = 189955 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 598 actaatataagatcttttag 617 |||||||||||||||||||| Sbjct: 84501 actaatataagatcttttag 84520
>gb|AC091106.17| Mus musculus chromosome 6, clone RP23-103L13, complete sequence Length = 192344 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ggggaaggagatggagaagg 226 |||||||||||||||||||| Sbjct: 8985 ggggaaggagatggagaagg 8966
>emb|AL935152.9| Mouse DNA sequence from clone RP24-387M5 on chromosome 2, complete sequence Length = 98020 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 tacaaacaacaaagacatgt 579 |||||||||||||||||||| Sbjct: 11385 tacaaacaacaaagacatgt 11366
>gb|AE017222.1| Thermus thermophilus HB27 plasmid pTT27, complete sequence Length = 232605 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 aagcttgtcccgctgcttcg 350 |||||||||||||||||||| Sbjct: 117571 aagcttgtcccgctgcttcg 117590
>dbj|AP006134.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09O08, TM0231b, complete sequence Length = 21590 Score = 40.1 bits (20), Expect = 8.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 100 gtggtgatcttcggcatgagctcctgctgcatgtgccaca 139 |||||||||||| ||| ||| || ||||||||| |||||| Sbjct: 8343 gtggtgatcttcagcaagagttcgtgctgcatgagccaca 8382
>dbj|AP004963.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT48D11, TM0142, complete sequence Length = 78601 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 100 gtggtgatcttcggcatgagctcctgctgcat 131 |||||||||||| ||| |||||| |||||||| Sbjct: 21841 gtggtgatcttcagcaagagctcatgctgcat 21872 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,777,647 Number of Sequences: 3902068 Number of extensions: 4777647 Number of successful extensions: 93524 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92655 Number of HSP's gapped (non-prelim): 869 length of query: 621 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 598 effective length of database: 17,143,297,704 effective search space: 10251692026992 effective search space used: 10251692026992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)