ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd24o15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1223 bits (617), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 119477 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 119418 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119417 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 119358 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119357 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 119298 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119297 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 119238 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119237 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 119178 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119177 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 119118 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119117 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 119058 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119057 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 118998 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118997 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 118938 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118937 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 118878 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 118877 ctgtgggatgtcaaaatgcatcggtag 118851 Score = 1223 bits (617), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95417 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 95476 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95477 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 95536 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95537 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 95596 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95597 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 95656 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95657 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 95716 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95717 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 95776 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95777 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 95836 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95837 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 95896 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95897 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 95956 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95957 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 96016 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 96017 ctgtgggatgtcaaaatgcatcggtag 96043
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 119342 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 119283 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119282 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 119223 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119222 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 119163 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119162 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 119103 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119102 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 119043 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119042 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 118983 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118982 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 118923 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118922 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 118863 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118862 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 118803 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118802 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 118743 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 118742 ctgtgggatgtcaaaatgcatcggtag 118716 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95814 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 95873 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95874 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 95933 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95934 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 95993 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95994 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 96053 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96054 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 96113 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96114 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 96173 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96174 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 96233 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96234 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 96293 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96294 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 96353 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96354 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 96413 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 96414 ctgtgggatgtcaaaatgcatcggtag 96440
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 119342 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 119283 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119282 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 119223 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119222 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 119163 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119162 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 119103 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119102 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 119043 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119042 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 118983 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118982 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 118923 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118922 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 118863 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118862 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 118803 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118802 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 118743 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 118742 ctgtgggatgtcaaaatgcatcggtag 118716 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95814 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 95873 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95874 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 95933 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95934 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 95993 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95994 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 96053 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96054 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 96113 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96114 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 96173 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96174 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 96233 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96234 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 96293 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96294 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 96353 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96354 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 96413 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 96414 ctgtgggatgtcaaaatgcatcggtag 96440
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 119291 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 119232 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119231 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 119172 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119171 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 119112 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119111 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 119052 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119051 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 118992 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118991 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 118932 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118931 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 118872 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118871 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 118812 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118811 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 118752 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118751 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 118692 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 118691 ctgtgggatgtcaaaatgcatcggtag 118665 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95759 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 95818 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95819 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 95878 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95879 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 95938 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95939 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 95998 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95999 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 96058 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96059 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 96118 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96119 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 96178 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96179 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 96238 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96239 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 96298 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96299 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 96358 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 96359 ctgtgggatgtcaaaatgcatcggtag 96385
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 31508392 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 31508451 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508452 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 31508511 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508512 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 31508571 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508572 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 31508631 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508632 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 31508691 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508692 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 31508751 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508752 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 31508811 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508812 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 31508871 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508872 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 31508931 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508932 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 31508991 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 31508992 ctgtgggatgtcaaaatgcatcggtag 31509018 Score = 464 bits (234), Expect = e-127 Identities = 234/234 (100%) Strand = Plus / Minus Query: 394 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 454 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 514 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 574 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513137 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 11513084 Score = 262 bits (132), Expect = 1e-66 Identities = 132/132 (100%) Strand = Plus / Minus Query: 496 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 556 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 615 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 616 atgcatcggtag 627 |||||||||||| Sbjct: 27320543 atgcatcggtag 27320532 Score = 133 bits (67), Expect = 8e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 410 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 469 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 470 taaaggaggtggggg 484 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 413 gtcgagagggaaacagcccggatcaccagctaaggccc 450 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 312 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 366 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 84204 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 84145 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84144 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 84085 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84084 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 84025 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84024 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 83965 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83964 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 83905 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83904 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 83845 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83844 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 83785 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83784 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 83725 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83724 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 83665 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83664 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 83605 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 83604 ctgtgggatgtcaaaatgcatcggtag 83578
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 119311 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 119252 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119251 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 119192 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119191 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 119132 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119131 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 119072 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119071 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 119012 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119011 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 118952 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118951 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 118892 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118891 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 118832 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118831 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 118772 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118771 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 118712 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 118711 ctgtgggatgtcaaaatgcatcggtag 118685 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95807 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 95866 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95867 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 95926 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95927 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 95986 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95987 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 96046 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96047 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 96106 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96107 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 96166 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96167 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 96226 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96227 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 96286 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96287 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 96346 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96347 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 96406 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 96407 ctgtgggatgtcaaaatgcatcggtag 96433
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 14581 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 14640 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14641 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 14700 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14701 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 14760 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14761 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 14820 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14821 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 14880 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14881 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 14940 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14941 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 15000 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15001 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 15060 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15061 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 15120 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15121 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 15180 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 15181 ctgtgggatgtcaaaatgcatcggtag 15207 Score = 1191 bits (601), Expect = 0.0 Identities = 621/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 122856 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 122915 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 122916 agcgagtcttcatagggcgattgtcactgcttatggacccgaac-taggtgatctatcca 122974 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122975 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 123034 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123035 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 123094 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123095 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 123154 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123155 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 123214 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123215 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 123274 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123275 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 123334 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123335 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 123394 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123395 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 123454 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 123455 ctgtgggatgtcaaaatgcatcggtag 123481
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 141389 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 141448 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141449 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 141508 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141509 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 141568 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141569 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 141628 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141629 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 141688 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141689 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 141748 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141749 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 141808 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141809 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 141868 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141869 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 141928 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141929 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 141988 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 141989 ctgtgggatgtcaaaatgcatcggtag 142015
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 93985 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 94044 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94045 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 94104 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94105 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 94164 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94165 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 94224 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94225 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 94284 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94285 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 94344 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94345 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 94404 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94405 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 94464 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94465 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 94524 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94525 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 94584 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 94585 ctgtgggatgtcaaaatgcatcggtag 94611
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 28049 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 28108 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28109 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 28168 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28169 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 28228 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28229 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 28288 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28289 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 28348 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28349 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 28408 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28409 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 28468 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28469 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 28528 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28529 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 28588 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28589 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 28648 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 28649 ctgtgggatgtcaaaatgcatcggtag 28675
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9268741 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 9268800 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268801 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 9268860 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268861 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 9268920 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268921 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 9268980 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268981 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 9269040 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269041 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 9269100 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269101 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 9269160 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269161 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 9269220 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269221 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 9269280 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269281 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 9269340 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 9269341 ctgtgggatgtcaaaatgcatcggtag 9269367 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9056655 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 9056714 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056715 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 9056774 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056775 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 9056834 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056835 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 9056894 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056895 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 9056954 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056955 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 9057014 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057015 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 9057074 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057075 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 9057134 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057135 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 9057194 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057195 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 9057254 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 9057255 ctgtgggatgtcaaaatgcatcggtag 9057281 Score = 1207 bits (609), Expect = 0.0 Identities = 622/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9228241 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 9228300 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 9228301 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctaggtgatctatcca 9228360 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228361 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 9228420 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228421 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 9228480 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228481 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 9228540 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228541 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 9228600 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228601 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 9228660 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228661 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 9228720 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228721 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 9228780 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228781 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 9228840 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 9228841 ctgtgggatgtcaaaatgcatcggtag 9228867 Score = 1191 bits (601), Expect = 0.0 Identities = 621/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9164830 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 9164889 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 9164890 agcgagtcttcatagggcgattgtcactgcttatggacccgaac-taggtgatctatcca 9164948 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164949 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 9165008 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165009 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 9165068 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165069 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 9165128 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165129 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 9165188 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165189 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 9165248 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165249 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 9165308 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165309 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 9165368 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165369 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 9165428 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 9165429 ctgtgggatgtcaaaatgcatcggtag 9165455
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 19938726 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 19938785 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938786 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 19938845 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938846 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 19938905 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938906 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 19938965 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938966 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 19939025 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939026 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 19939085 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939086 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 19939145 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939146 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 19939205 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939206 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 19939265 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939266 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 19939325 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 19939326 ctgtgggatgtcaaaatgcatcggtag 19939352 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 10387593 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 10387652 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387653 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 10387712 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387713 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 10387772 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387773 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 10387832 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387833 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 10387892 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387893 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 10387952 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387953 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 10388012 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388013 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 10388072 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388073 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 10388132 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388133 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 10388192 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 10388193 ctgtgggatgtcaaaatgcatcggtag 10388219 Score = 1207 bits (609), Expect = 0.0 Identities = 622/627 (99%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 10276705 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 10276646 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276645 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 10276586 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276585 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 10276526 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276525 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 10276466 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276465 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 10276406 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276405 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 10276346 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276345 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 10276286 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276285 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 10276226 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276225 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 10276166 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10276165 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaag 10276106 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 10276105 ctgtgggatgtcaaaatgcatcggtag 10276079 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 550 gatcgagcgcccttgcgctgaagatgaacggggctaagc 588 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 54.0 bits (27), Expect = 6e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 319 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 378 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 379 tcggccagtgagacgatgggggataagcttcatcgtcgagag 420 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Minus Query: 491 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 550 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 31598908 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 31598967 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598968 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 31599027 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599028 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 31599087 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599088 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 31599147 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599148 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 31599207 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599208 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 31599267 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599268 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 31599327 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599328 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 31599387 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599388 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 31599447 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599448 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 31599507 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 31599508 ctgtgggatgtcaaaatgcatcggtag 31599534 Score = 464 bits (234), Expect = e-127 Identities = 234/234 (100%) Strand = Plus / Minus Query: 394 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 454 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 514 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 574 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509900 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 11509847 Score = 262 bits (132), Expect = 1e-66 Identities = 132/132 (100%) Strand = Plus / Minus Query: 496 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 556 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 615 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 616 atgcatcggtag 627 |||||||||||| Sbjct: 27411866 atgcatcggtag 27411855 Score = 133 bits (67), Expect = 8e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 410 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 469 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 470 taaaggaggtggggg 484 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 413 gtcgagagggaaacagcccggatcaccagctaaggccc 450 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 312 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 366 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 33526224 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 33526283 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526284 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 33526343 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526344 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 33526403 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526404 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 33526463 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526464 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 33526523 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526524 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 33526583 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526584 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 33526643 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526644 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 33526703 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526704 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 33526763 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526764 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 33526823 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 33526824 ctgtgggatgtcaaaatgcatcggtag 33526850 Score = 355 bits (179), Expect = 1e-94 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 403 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 462 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 463 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 522 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 523 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 527925 Query: 583 ctaagcgatctgccgaagctgtgggatgtcaaaat 617 |||||||||||||| |||||||||||||||||||| Sbjct: 527926 ctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 89.7 bits (45), Expect = 1e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccgg 48 |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 16677980 ccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 16677933 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 550 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 591 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 47317 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 47258 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47257 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 47198 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47197 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 47138 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47137 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 47078 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47077 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 47018 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47017 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 46958 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46957 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 46898 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46897 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 46838 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46837 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 46778 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46777 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 46718 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 46717 ctgtgggatgtcaaaatgcatcggtag 46691
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 71421 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 71480 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71481 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 71540 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71541 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 71600 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71601 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 71660 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71661 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 71720 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71721 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 71780 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71781 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 71840 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71841 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 71900 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71901 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 71960 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71961 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 72020 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 72021 ctgtgggatgtcaaaatgcatcggtag 72047
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 193 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 252 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 312 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 313 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 372 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 432 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 492 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 493 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 552 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 553 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 612 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 613 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 672 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 673 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 732 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 733 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 792 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 793 ctgtgggatgtcaaaatgcatcggtag 819
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 388 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 447 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 507 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 508 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 567 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 627 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 628 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 687 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 747 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 807 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 867 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 927 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 987 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 988 ctgtgggatgtcaaaatgcatcggtag 1014
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 259 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 318 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 319 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 378 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 438 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 498 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 558 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 618 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 619 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 678 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 679 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 738 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 798 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 799 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 858 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 859 ctgtgggatgtcaaaatgcatcggtag 885
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 390 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 449 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 509 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 510 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 569 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 629 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 630 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 689 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 749 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 809 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 869 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 870 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 929 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 930 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 989 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 990 ctgtgggatgtcaaaatgcatcggtag 1016
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 68 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 128 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 188 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 248 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 308 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 309 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 368 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 428 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 488 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 548 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 549 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 608 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 609 ctgtgggatgtcaaaatgcatcggtag 635
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 209 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 268 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 328 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 388 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 448 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 508 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 568 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 628 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 688 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 748 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 808 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 809 ctgtgggatgtcaaaatgcatcggtag 835
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 388 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 447 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 507 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 508 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 567 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 627 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 628 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 687 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 747 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 807 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 867 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 927 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 987 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 988 ctgtgggatgtcaaaatgcatcggtag 1014
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 11 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 70 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 130 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 190 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 250 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 310 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 311 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 370 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 430 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 490 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 491 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 550 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 610 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 611 ctgtgggatgtcaaaatgcatcggtag 637
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 19950002 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 19950061 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950062 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 19950121 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950122 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 19950181 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950182 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 19950241 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950242 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 19950301 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950302 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 19950361 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950362 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 19950421 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950422 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 19950481 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950482 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 19950541 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950542 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 19950601 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 19950602 ctgtgggatgtcaaaatgcatcggtag 19950628 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 10393632 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 10393691 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393692 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 10393751 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393752 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 10393811 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393812 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 10393871 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393872 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 10393931 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393932 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 10393991 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393992 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 10394051 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394052 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 10394111 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394112 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 10394171 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394172 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 10394231 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 10394232 ctgtgggatgtcaaaatgcatcggtag 10394258 Score = 1207 bits (609), Expect = 0.0 Identities = 622/627 (99%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 10282744 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 10282685 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282684 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 10282625 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282624 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 10282565 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282564 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 10282505 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282504 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 10282445 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282444 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 10282385 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282384 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 10282325 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282324 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 10282265 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282264 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 10282205 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10282204 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaag 10282145 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 10282144 ctgtgggatgtcaaaatgcatcggtag 10282118 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 550 gatcgagcgcccttgcgctgaagatgaacggggctaagc 588 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 54.0 bits (27), Expect = 6e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 319 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 378 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 379 tcggccagtgagacgatgggggataagcttcatcgtcgagag 420 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Minus Query: 491 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 550 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 119285 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 119226 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119225 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 119166 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119165 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 119106 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119105 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 119046 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119045 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 118986 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118985 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 118926 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118925 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 118866 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118865 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 118806 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118805 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 118746 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118745 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 118686 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 118685 ctgtgggatgtcaaaatgcatcggtag 118659 Score = 1215 bits (613), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95754 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 95813 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95814 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 95873 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95874 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 95933 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95934 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 95993 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95994 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 96053 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96054 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 96113 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96114 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 96173 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96174 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 96233 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96234 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 96293 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96294 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 96353 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 96354 ctgtgggatgtcaaaatgcatcggtag 96380
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1207 bits (609), Expect = 0.0 Identities = 622/627 (99%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 118258 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 118199 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118198 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 118139 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118138 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 118079 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118078 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 118019 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118018 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 117959 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117958 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 117899 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117898 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 117839 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117838 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 117779 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117778 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 117719 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 117718 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaag 117659 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 117658 ctgtgggatgtcaaaatgcatcggtag 117632
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1207 bits (609), Expect = 0.0 Identities = 622/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 20816 ccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaa 20875 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20876 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 20935 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20936 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 20995 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20996 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 21055 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21056 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 21115 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21116 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 21175 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21176 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 21235 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21236 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 21295 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21296 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 21355 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21356 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 21415 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 21416 ctgtgggatgtcaaaatgcatcggtag 21442 Score = 1170 bits (590), Expect = 0.0 Identities = 619/628 (98%), Gaps = 1/628 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| ||||||| |||| |||||| ||| Sbjct: 44302 ccggcgactcataggcagtggcttggttaagggaatggaaccctccggagccgtagtgaa 44243 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44242 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 44183 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44182 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 44123 Query: 181 tcagcggatgagttgtggttaggggtg-aaatgccactcgaacccagagctagctggttc 239 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 44122 tcagcggatgagttgtggttaggggtgtaaatgccactcgaacccagagctagttggttc 44063 Query: 240 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44062 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 44003 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44002 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 43943 Query: 360 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43942 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 43883 Query: 420 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43882 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 43823 Query: 480 gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgta 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43822 gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgta 43763 Query: 540 atagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaa 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43762 atagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaa 43703 Query: 600 gctgtgggatgtcaaaatgcatcggtag 627 |||||||||||||||||||||||||||| Sbjct: 43702 gctgtgggatgtcaaaatgcatcggtag 43675
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1207 bits (609), Expect = 0.0 Identities = 622/627 (99%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 58030 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 57971 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57970 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 57911 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57910 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 57851 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57850 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 57791 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57790 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 57731 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57730 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 57671 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57670 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 57611 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57610 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 57551 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57550 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 57491 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 57490 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaag 57431 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 57430 ctgtgggatgtcaaaatgcatcggtag 57404
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1207 bits (609), Expect = 0.0 Identities = 622/627 (99%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 931 ccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaa 872 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 871 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 812 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 811 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 752 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 751 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 692 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 691 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 632 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 631 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 572 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 571 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 512 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 452 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 392 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 391 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 332 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 331 ctgtgggatgtcaaaatgcatcggtag 305
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1207 bits (609), Expect = 0.0 Identities = 622/627 (99%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 123141 ccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaa 123082 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123081 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 123022 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123021 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 122962 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122961 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 122902 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122901 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 122842 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122841 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 122782 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122781 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 122722 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122721 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 122662 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122661 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 122602 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122601 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 122542 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 122541 ctgtgggatgtcaaaatgcatcggtag 122515 Score = 1207 bits (609), Expect = 0.0 Identities = 622/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 99696 ccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaa 99755 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99756 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 99815 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99816 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 99875 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99876 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 99935 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99936 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 99995 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99996 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 100055 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100056 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 100115 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100116 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 100175 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100176 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 100235 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100236 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 100295 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 100296 ctgtgggatgtcaaaatgcatcggtag 100322
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1207 bits (609), Expect = 0.0 Identities = 622/627 (99%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 123858 ccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaa 123799 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123798 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 123739 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123738 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 123679 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123678 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 123619 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123618 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 123559 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123558 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 123499 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123498 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 123439 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123438 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 123379 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123378 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 123319 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123318 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 123259 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 123258 ctgtgggatgtcaaaatgcatcggtag 123232 Score = 1207 bits (609), Expect = 0.0 Identities = 622/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 100373 ccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaa 100432 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100433 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 100492 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100493 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 100552 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100553 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 100612 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100613 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 100672 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100673 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 100732 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100733 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 100792 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100793 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 100852 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100853 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 100912 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100913 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 100972 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 100973 ctgtgggatgtcaaaatgcatcggtag 100999
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1203 bits (607), Expect = 0.0 Identities = 620/625 (99%) Strand = Plus / Minus Query: 3 ggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaaag 62 |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9241538 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 9241479 Query: 63 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 122 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241478 cgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 9241419 Query: 123 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 182 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9241418 accaggatgaagcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatc 9241359 Query: 183 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241358 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 9241299 Query: 243 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241298 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 9241239 Query: 303 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241238 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 9241179 Query: 363 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241178 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 9241119 Query: 423 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241118 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 9241059 Query: 483 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241058 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 9240999 Query: 543 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 602 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240998 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 9240939 Query: 603 gtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||| Sbjct: 9240938 gtgggatgtcaaaatgcatcggtag 9240914 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 284 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 343 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 344 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 403 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 404 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 449 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 109 bits (55), Expect = 1e-20 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 438 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 491 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 492 acagccaggaggtttgcctagaagcagccaccctttaaagag 533 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Minus Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagct 602 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 599 agctgtgggatgtcaaaatgcatcggtag 627 |||| |||||| ||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtag 3580257 Score = 40.1 bits (20), Expect = 8.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 437 accagctaaggcccctaaatgaccgctcagtgataaagga 476 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1203 bits (607), Expect = 0.0 Identities = 620/625 (99%) Strand = Plus / Minus Query: 3 ggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaaag 62 |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 52751 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 52692 Query: 63 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 122 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52691 cgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 52632 Query: 123 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 182 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 52631 accaggatgaagcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatc 52572 Query: 183 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52571 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 52512 Query: 243 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52511 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 52452 Query: 303 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52451 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 52392 Query: 363 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52391 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 52332 Query: 423 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52331 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 52272 Query: 483 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52271 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 52212 Query: 543 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 602 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52211 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 52152 Query: 603 gtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||| Sbjct: 52151 gtgggatgtcaaaatgcatcggtag 52127
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1199 bits (605), Expect = 0.0 Identities = 621/627 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 387 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 446 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 506 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 507 tgaccaggatgaagcttggatgaaaccaagcagaggtccgaaccgactgatgttgaagaa 566 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 567 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 626 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 686 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 687 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 746 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 806 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 807 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgatagaggaggtg 866 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 867 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 926 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 927 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 986 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 987 ctgtgggatgtcaaaatgcatcggtag 1013
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1144 bits (577), Expect = 0.0 Identities = 616/627 (98%), Gaps = 2/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 123081 ccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaa 123022 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123021 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 122962 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122961 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 122902 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122901 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 122842 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122841 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 122782 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122781 gtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 122723 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122722 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 122663 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 122662 ggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtg 122603 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 122602 ggggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaa 122543 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122542 tagctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 122484 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 122483 ctgtgggatgtcaaaatgcatcggtag 122457 Score = 1144 bits (577), Expect = 0.0 Identities = 616/627 (98%), Gaps = 2/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 99656 ccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaa 99715 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99716 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 99775 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99776 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 99835 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99836 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 99895 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99896 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 99955 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99956 gtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 100014 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100015 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 100074 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 100075 ggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtg 100134 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 100135 ggggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaa 100194 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100195 tagctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 100253 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 100254 ctgtgggatgtcaaaatgcatcggtag 100280
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1144 bits (577), Expect = 0.0 Identities = 616/627 (98%), Gaps = 2/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 6009 ccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaa 6068 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6069 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 6128 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6129 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 6188 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6189 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 6248 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6249 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 6308 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6309 gtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 6367 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6368 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 6427 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 6428 ggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtg 6487 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 6488 ggggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaa 6547 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6548 tagctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 6606 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 6607 ctgtgggatgtcaaaatgcatcggtag 6633
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1144 bits (577), Expect = 0.0 Identities = 616/627 (98%), Gaps = 2/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 597 ccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaa 656 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 657 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 716 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 776 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 777 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 836 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 837 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 896 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 897 gtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 955 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 956 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 1015 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1016 ggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtg 1075 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1076 ggggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaa 1135 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1136 tagctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 1194 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 1195 ctgtgggatgtcaaaatgcatcggtag 1221
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1082 bits (546), Expect = 0.0 Identities = 556/560 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 390 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 449 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 509 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 510 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 569 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 629 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 630 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 689 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 749 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 809 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 869 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 870 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 929 Query: 541 tagctcactgatcgagcgcc 560 |||||||||||||||||||| Sbjct: 930 tagctcactgatcgagcgcc 949
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 1065 bits (537), Expect = 0.0 Identities = 604/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 141517 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 141463 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 141462 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 141403 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 141402 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 141343 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141342 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 141283 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141282 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 141223 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 141222 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccca 141163 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141162 aaataacaggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 141103 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141102 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 141043 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 141042 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 140983 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 140982 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 140923 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||||||||||||| Sbjct: 140922 ctgtgggatgtaaaaatgcatcggtag 140896 Score = 1065 bits (537), Expect = 0.0 Identities = 604/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 112140 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 112194 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 112195 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 112254 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 112255 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 112314 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112315 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 112374 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112375 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 112434 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 112435 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccca 112494 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112495 aaataacaggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 112554 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112555 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 112614 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 112615 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 112674 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 112675 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 112734 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||||||||||||| Sbjct: 112735 ctgtgggatgtaaaaatgcatcggtag 112761
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 1057 bits (533), Expect = 0.0 Identities = 603/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 138914 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 138860 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 138859 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 138800 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 138799 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 138740 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138739 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 138680 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138679 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 138620 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 138619 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 138560 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138559 aaataacaggggtcgaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 138500 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138499 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 138440 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 138439 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 138380 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 138379 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 138320 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||||||||||||| Sbjct: 138319 ctgtgggatgtaaaaatgcatcggtag 138293 Score = 1057 bits (533), Expect = 0.0 Identities = 603/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 110183 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 110237 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110238 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 110297 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 110298 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 110357 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110358 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 110417 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110418 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 110477 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 110478 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 110537 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110538 aaataacaggggtcgaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 110597 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110598 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 110657 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 110658 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 110717 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 110718 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 110777 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||||||||||||| Sbjct: 110778 ctgtgggatgtaaaaatgcatcggtag 110804
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 1057 bits (533), Expect = 0.0 Identities = 603/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 131077 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 131023 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131022 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 130963 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 130962 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 130903 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130902 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 130843 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130842 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 130783 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 130782 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 130723 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130722 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 130663 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130662 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 130603 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 130602 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 130543 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 130542 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 130483 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 130482 ctgtgggatgtaaaaatacatcggtag 130456 Score = 1057 bits (533), Expect = 0.0 Identities = 603/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 103558 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 103612 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 103613 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 103672 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 103673 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 103732 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103733 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 103792 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103793 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 103852 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 103853 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 103912 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103913 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 103972 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103973 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 104032 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 104033 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 104092 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 104093 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 104152 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 104153 ctgtgggatgtaaaaatacatcggtag 104179
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 1057 bits (533), Expect = 0.0 Identities = 603/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 591 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 645 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 646 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 705 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 706 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 765 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 825 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 826 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 885 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 886 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 945 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 946 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 1005 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1006 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 1065 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1066 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 1125 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 1126 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 1185 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| |||| |||||||||| Sbjct: 1186 ctgtgggatgtaaaaaggcatcggtag 1212
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 1049 bits (529), Expect = 0.0 Identities = 602/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 132185 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 132131 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132130 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 132071 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 132070 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 132011 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132010 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 131951 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131950 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 131891 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 131890 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 131831 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131830 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 131771 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 131770 ggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggta 131711 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 131710 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 131651 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 131650 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 131591 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 131590 ctgtgggatgtaaaaatacatcggtag 131564 Score = 1049 bits (529), Expect = 0.0 Identities = 602/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 104693 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 104747 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104748 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 104807 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 104808 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 104867 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104868 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 104927 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104928 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 104987 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104988 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 105047 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105048 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 105107 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 105108 ggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggta 105167 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105168 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 105227 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 105228 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 105287 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 105288 ctgtgggatgtaaaaatacatcggtag 105314
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 1049 bits (529), Expect = 0.0 Identities = 602/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 135311 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 135257 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135256 agcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatcca 135197 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 135196 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 135137 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135136 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 135077 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135076 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 135017 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 135016 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctca 134957 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134956 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 134897 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134896 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 134837 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134836 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 134777 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 134776 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 134717 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||||||||||||| Sbjct: 134716 ctgtgggatgtaaaaatgcatcggtag 134690 Score = 1049 bits (529), Expect = 0.0 Identities = 602/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 106595 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 106649 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106650 agcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatcca 106709 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 106710 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 106769 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106770 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 106829 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106830 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 106889 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 106890 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctca 106949 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106950 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 107009 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107010 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 107069 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107070 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 107129 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 107130 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 107189 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||||||||||||| Sbjct: 107190 ctgtgggatgtaaaaatgcatcggtag 107216
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 1049 bits (529), Expect = 0.0 Identities = 602/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 136348 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 136294 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136293 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 136234 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 136233 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 136174 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136173 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 136114 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136113 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 136054 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 136053 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 135994 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135993 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 135934 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135933 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 135874 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135873 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 135814 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 135813 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 135754 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 135753 ctgtgggatgtaaaaatacatcggtag 135727 Score = 1049 bits (529), Expect = 0.0 Identities = 602/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 107209 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 107263 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107264 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 107323 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 107324 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 107383 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107384 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 107443 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107444 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 107503 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 107504 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 107563 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107564 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 107623 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107624 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 107683 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107684 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 107743 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 107744 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 107803 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 107804 ctgtgggatgtaaaaatacatcggtag 107830
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 1049 bits (529), Expect = 0.0 Identities = 602/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 142289 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 142235 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 142234 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 142175 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 142174 tgaccaggatgaagcttggatgaaactaagcggaggtccgaaccgactgatgttgaagaa 142115 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 142114 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctcgttct 142055 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142054 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 141995 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 141994 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 141935 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 141934 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttgatcgtcgagag 141875 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 141874 ggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggta 141815 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 141814 ggggtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 141755 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 141754 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 141695 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 141694 ctgtgggatgtaaaaatacatcggtag 141668 Score = 1049 bits (529), Expect = 0.0 Identities = 602/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 111039 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 111093 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 111094 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 111153 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 111154 tgaccaggatgaagcttggatgaaactaagcggaggtccgaaccgactgatgttgaagaa 111213 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 111214 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctcgttct 111273 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111274 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 111333 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 111334 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 111393 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 111394 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttgatcgtcgagag 111453 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 111454 ggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggta 111513 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 111514 ggggtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 111573 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 111574 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 111633 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 111634 ctgtgggatgtaaaaatacatcggtag 111660
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 1049 bits (529), Expect = 0.0 Identities = 602/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 136002 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 135948 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135947 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 135888 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 135887 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 135828 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135827 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 135768 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135767 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 135708 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135707 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 135648 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135647 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 135588 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135587 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 135528 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135527 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 135468 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 135467 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 135408 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 135407 ctgtgggatgtaaaaatacatcggtag 135381 Score = 1049 bits (529), Expect = 0.0 Identities = 602/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 106423 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 106477 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106478 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 106537 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 106538 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 106597 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106598 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 106657 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106658 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 106717 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106718 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 106777 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106778 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 106837 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106838 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 106897 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106898 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 106957 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 106958 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 107017 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 107018 ctgtgggatgtaaaaatacatcggtag 107044
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 1049 bits (529), Expect = 0.0 Identities = 602/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 135590 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 135536 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135535 agcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatcca 135476 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 135475 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 135416 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135415 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 135356 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135355 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 135296 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 135295 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctca 135236 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135235 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 135176 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135175 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 135116 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135115 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 135056 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 135055 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 134996 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||||||||||||| Sbjct: 134995 ctgtgggatgtaaaaatgcatcggtag 134969 Score = 1049 bits (529), Expect = 0.0 Identities = 602/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 106817 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 106871 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106872 agcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatcca 106931 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 106932 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 106991 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106992 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 107051 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107052 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 107111 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 107112 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctca 107171 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107172 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 107231 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107232 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 107291 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107292 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 107351 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 107352 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 107411 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||||||||||||| Sbjct: 107412 ctgtgggatgtaaaaatgcatcggtag 107438
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 1049 bits (529), Expect = 0.0 Identities = 603/627 (96%), Gaps = 6/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 133632 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 133578 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133577 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 133518 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 133517 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 133458 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133457 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 133398 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 133397 ccccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcg 133338 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133337 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 133278 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133277 aaatcaca-gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 133219 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133218 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 133159 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 133158 ggggtgcagagacagccaggaggtttgcctagaagccgccacccttgaaagagtgcgtaa 133099 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 133098 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 133039 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||||||||||||| Sbjct: 133038 ctgtgggatgtaaaaatgcatcggtag 133012 Score = 1049 bits (529), Expect = 0.0 Identities = 603/627 (96%), Gaps = 6/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 104339 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 104393 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104394 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 104453 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 104454 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 104513 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104514 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 104573 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104574 ccccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcg 104633 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104634 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 104693 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104694 aaatcaca-gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 104752 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104753 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 104812 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 104813 ggggtgcagagacagccaggaggtttgcctagaagccgccacccttgaaagagtgcgtaa 104872 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 104873 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 104932 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||||||||||||| Sbjct: 104933 ctgtgggatgtaaaaatgcatcggtag 104959
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 1049 bits (529), Expect = 0.0 Identities = 602/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 132178 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 132124 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132123 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 132064 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 132063 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 132004 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132003 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 131944 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131943 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 131884 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 131883 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 131824 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131823 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 131764 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 131763 ggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggta 131704 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 131703 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 131644 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 131643 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 131584 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 131583 ctgtgggatgtaaaaatacatcggtag 131557 Score = 1049 bits (529), Expect = 0.0 Identities = 602/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 104691 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 104745 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104746 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 104805 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 104806 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 104865 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104866 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 104925 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104926 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 104985 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104986 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 105045 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105046 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 105105 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 105106 ggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggta 105165 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105166 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 105225 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 105226 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 105285 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 105286 ctgtgggatgtaaaaatacatcggtag 105312
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 1045 bits (527), Expect = 0.0 Identities = 576/592 (97%), Gaps = 2/592 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtg--gcttggttaagggaacggaacccaccggnaccgtagcg 58 |||| ||||||||| ||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 122623 ccggtgactcataggcagtgtggcttggttaagggaacggaacccaccggagccgtagcg 122564 Query: 59 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 118 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122563 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 122504 Query: 119 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 178 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 122503 catgaccaggatgaagcttggatgaaactaagcagaggttcgaaccgactgatgttgaag 122444 Query: 179 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122443 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 122384 Query: 239 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122383 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 122324 Query: 299 cggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 358 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122323 cggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaatactagatatgaccc 122264 Query: 359 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 418 |||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 122263 aaaaataataggattcaaagtcggccagtgagacgatgggggataagcttcatcgtcgag 122204 Query: 419 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 478 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 122203 agggaaacagcctggatcaccagctaaggcccctaaatgaccgctcaatgataaaggagg 122144 Query: 479 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122143 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 122084 Query: 539 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcga 590 ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 122083 aatagctcactaatcgagcgcccttgcgctgaagatgaacggggctaagcga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 1045 bits (527), Expect = 0.0 Identities = 576/592 (97%), Gaps = 2/592 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtg--gcttggttaagggaacggaacccaccggnaccgtagcg 58 |||| ||||||||| ||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 12825164 ccggtgactcataggcagtgtggcttggttaagggaacggaacccaccggagccgtagcg 12825105 Query: 59 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 118 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825104 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 12825045 Query: 119 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 178 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 12825044 catgaccaggatgaagcttggatgaaactaagcagaggttcgaaccgactgatgttgaag 12824985 Query: 179 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824984 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 12824925 Query: 239 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824924 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 12824865 Query: 299 cggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 358 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12824864 cggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaatactagatatgaccc 12824805 Query: 359 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 418 |||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824804 aaaaataataggattcaaagtcggccagtgagacgatgggggataagcttcatcgtcgag 12824745 Query: 419 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 478 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 12824744 agggaaacagcctggatcaccagctaaggcccctaaatgaccgctcaatgataaaggagg 12824685 Query: 479 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824684 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 12824625 Query: 539 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcga 590 ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 12824624 aatagctcactaatcgagcgcccttgcgctgaagatgaacggggctaagcga 12824573
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 135710 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 135656 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135655 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 135596 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 135595 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 135536 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135535 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 135476 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135475 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 135416 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135415 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 135356 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135355 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 135296 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135295 ggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggta 135236 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135235 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 135176 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 135175 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 135116 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 135115 ctgtgggatgtaaaaatacatcggtag 135089 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 106920 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 106974 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106975 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 107034 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 107035 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 107094 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107095 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 107154 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107155 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 107214 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 107215 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 107274 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107275 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 107334 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 107335 ggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggta 107394 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107395 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 107454 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 107455 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 107514 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 107515 ctgtgggatgtaaaaatacatcggtag 107541
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 2114 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 2168 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2169 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 2228 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 2229 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 2288 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2289 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 2348 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2349 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 2408 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2409 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 2468 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2469 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 2528 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2529 ggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggta 2588 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2589 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 2648 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 2649 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 2708 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 2709 ctgtgggatgtaaaaatacatcggtag 2735
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 589 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 643 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 644 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcta 703 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 704 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 763 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 823 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 824 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 883 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 884 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 943 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 944 aaataactggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagag 1003 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1004 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 1063 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1064 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 1123 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 1124 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 1183 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 1184 ctgtgggatgtcaaaatgcatcggtag 1210
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 134956 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 134902 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134901 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 134842 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 134841 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 134782 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134781 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 134722 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134721 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 134662 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 134661 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 134602 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 134601 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 134542 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134541 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 134482 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134481 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 134422 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 134421 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaag 134362 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 134361 ctgtgggatgtaaaaatacatcggtag 134335 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 106080 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 106134 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106135 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 106194 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 106195 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 106254 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106255 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 106314 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106315 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 106374 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106375 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 106434 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106435 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 106494 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106495 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 106554 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106555 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 106614 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 106615 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaag 106674 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 106675 ctgtgggatgtaaaaatacatcggtag 106701
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 132408 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 132354 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 132353 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcta 132294 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 132293 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 132234 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132233 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 132174 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132173 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 132114 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 132113 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 132054 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 132053 aaataactggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagag 131994 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131993 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 131934 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 131933 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 131874 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 131873 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 131814 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 131813 ctgtgggatgtcaaaatgcatcggtag 131787 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 104356 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 104410 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 104411 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcta 104470 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 104471 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 104530 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104531 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 104590 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104591 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 104650 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104651 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 104710 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 104711 aaataactggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagag 104770 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104771 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 104830 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 104831 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 104890 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 104891 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 104950 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 104951 ctgtgggatgtcaaaatgcatcggtag 104977
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 135091 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 135037 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135036 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 134977 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 134976 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 134917 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134916 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 134857 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134856 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 134797 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 134796 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 134737 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 134736 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 134677 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134676 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 134617 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134616 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 134557 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 134556 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaag 134497 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 134496 ctgtgggatgtaaaaatacatcggtag 134470 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 106252 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 106306 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106307 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 106366 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 106367 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 106426 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106427 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 106486 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106487 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 106546 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106547 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 106606 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106607 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 106666 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106667 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 106726 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106727 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 106786 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 106787 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaag 106846 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 106847 ctgtgggatgtaaaaatacatcggtag 106873
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 135089 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 135035 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135034 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 134975 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 134974 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 134915 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134914 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 134855 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134854 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 134795 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 134794 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 134735 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 134734 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 134675 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134674 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 134615 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134614 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 134555 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 134554 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaag 134495 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 134494 ctgtgggatgtaaaaatacatcggtag 134468 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 106249 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 106303 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106304 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 106363 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 106364 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 106423 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106424 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 106483 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106484 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 106543 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106544 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 106603 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106604 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 106663 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106664 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 106723 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106724 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 106783 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 106784 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaag 106843 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 106844 ctgtgggatgtaaaaatacatcggtag 106870
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 135001 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 134947 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134946 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 134887 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 134886 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 134827 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134826 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 134767 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134766 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 134707 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 134706 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 134647 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 134646 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 134587 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134586 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 134527 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134526 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 134467 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 134466 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaag 134407 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 134406 ctgtgggatgtaaaaatacatcggtag 134380 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 106127 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 106181 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106182 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 106241 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 106242 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 106301 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106302 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 106361 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106362 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 106421 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106422 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 106481 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106482 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 106541 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106542 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 106601 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106602 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 106661 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 106662 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaag 106721 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 106722 ctgtgggatgtaaaaatacatcggtag 106748
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 133369 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 133315 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 133314 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcta 133255 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 133254 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 133195 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133194 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 133135 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133134 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 133075 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 133074 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 133015 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 133014 aaataactggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagag 132955 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132954 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 132895 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 132894 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 132835 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 132834 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 132775 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 132774 ctgtgggatgtcaaaatgcatcggtag 132748 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 105280 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 105334 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 105335 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcta 105394 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 105395 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 105454 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105455 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 105514 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105515 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 105574 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 105575 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 105634 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 105635 aaataactggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagag 105694 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105695 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 105754 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105755 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 105814 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 105815 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 105874 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 105875 ctgtgggatgtcaaaatgcatcggtag 105901
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 135708 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 135654 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135653 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 135594 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 135593 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 135534 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135533 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 135474 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135473 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 135414 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135413 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 135354 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135353 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 135294 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135293 ggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggta 135234 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135233 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 135174 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 135173 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 135114 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 135113 ctgtgggatgtaaaaatacatcggtag 135087 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 106918 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 106972 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106973 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 107032 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 107033 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 107092 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107093 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 107152 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107153 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 107212 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 107213 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 107272 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107273 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 107332 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 107333 ggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggta 107392 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107393 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 107452 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 107453 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 107512 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 107513 ctgtgggatgtaaaaatacatcggtag 107539
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 135439 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 135385 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135384 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 135325 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 135324 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 135265 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135264 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 135205 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135204 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 135145 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135144 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 135085 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135084 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 135025 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135024 ggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggta 134965 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134964 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 134905 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 134904 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 134845 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 134844 ctgtgggatgtaaaaatacatcggtag 134818 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 106699 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 106753 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106754 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 106813 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 106814 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 106873 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106874 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 106933 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106934 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 106993 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106994 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 107053 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107054 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 107113 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 107114 ggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggta 107173 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107174 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 107233 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 107234 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 107293 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 107294 ctgtgggatgtaaaaatacatcggtag 107320
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 139119 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 139065 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139064 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 139005 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 139004 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 138945 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138944 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 138885 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138884 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 138825 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138824 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcc 138765 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138764 aaataataggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 138705 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138704 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 138645 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 138644 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 138585 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 138584 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 138525 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 138524 ctgtgggatgtaaaaatacatcggtag 138498 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 110180 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 110234 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110235 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 110294 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 110295 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 110354 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110355 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 110414 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110415 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 110474 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110475 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcc 110534 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110535 aaataataggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 110594 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110595 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 110654 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 110655 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 110714 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 110715 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 110774 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 110775 ctgtgggatgtaaaaatacatcggtag 110801
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 1041 bits (525), Expect = 0.0 Identities = 601/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 687 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 741 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 801 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 802 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 861 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 862 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 921 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 922 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 981 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 982 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 1041 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1042 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 1101 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1102 ggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggta 1161 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1162 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 1221 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 1222 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 1281 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 1282 ctgtgggatgtaaaaatacatcggtag 1308
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 1039 bits (524), Expect = 0.0 Identities = 597/622 (95%), Gaps = 5/622 (0%) Strand = Plus / Plus Query: 6 gactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaaagcga 65 ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 66 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 125 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 126 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 185 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 766 Query: 186 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 826 Query: 246 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 886 Query: 306 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaata 365 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 887 ggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaata 946 Query: 366 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 425 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 acaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 1006 Query: 426 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1007 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 1066 Query: 486 gcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagct 545 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1067 gcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagct 1126 Query: 546 cactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 605 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1127 cactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtg 1186 Query: 606 ggatgtcaaaatgcatcggtag 627 |||||| |||||||||| |||| Sbjct: 1187 ggatgtaaaaatgcatccgtag 1208
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 1039 bits (524), Expect = 0.0 Identities = 601/627 (95%), Gaps = 9/627 (1%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 127273 ccggcgactcataggcagtggcttggttaagggaat-----ccaccgtagccgtagcgaa 127219 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127218 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 127159 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 127158 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 127099 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127098 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 127039 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127038 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 126979 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 126978 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccca 126919 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126918 ----aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 126863 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126862 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 126803 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 126802 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 126743 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 126742 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 126683 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 126682 ctgtgggatgtcaaaatgcatcggtag 126656 Score = 1039 bits (524), Expect = 0.0 Identities = 601/627 (95%), Gaps = 9/627 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 107649 ccggcgactcataggcagtggcttggttaagggaat-----ccaccgtagccgtagcgaa 107703 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107704 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 107763 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 107764 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 107823 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107824 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 107883 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107884 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 107943 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 107944 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccca 108003 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108004 ----aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 108059 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108060 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 108119 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 108120 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 108179 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 108180 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 108239 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||| Sbjct: 108240 ctgtgggatgtcaaaatgcatcggtag 108266
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 1035 bits (522), Expect = 0.0 Identities = 604/632 (95%), Gaps = 10/632 (1%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| || ||||||| Sbjct: 138995 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccatagcgaa 138941 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 138940 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 138881 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 138880 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 138821 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138820 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 138761 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138760 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 138701 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc-- 358 |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138700 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccca 138641 Query: 359 ---aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138640 aaacaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 138581 Query: 416 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138580 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 138521 Query: 476 aggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtg 535 |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 138520 aggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtg 138461 Query: 536 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 595 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 138460 cgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgc 138401 Query: 596 cgaagctgtgggatgtcaaaatgcatcggtag 627 |||||||||||||||| ||||||||||||||| Sbjct: 138400 cgaagctgtgggatgtaaaaatgcatcggtag 138369 Score = 1035 bits (522), Expect = 0.0 Identities = 604/632 (95%), Gaps = 10/632 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| || ||||||| Sbjct: 110950 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccatagcgaa 111004 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 111005 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 111064 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 111065 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 111124 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111125 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 111184 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111185 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 111244 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc-- 358 |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111245 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccca 111304 Query: 359 ---aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111305 aaacaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 111364 Query: 416 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111365 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 111424 Query: 476 aggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtg 535 |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 111425 aggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtg 111484 Query: 536 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 595 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 111485 cgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgc 111544 Query: 596 cgaagctgtgggatgtcaaaatgcatcggtag 627 |||||||||||||||| ||||||||||||||| Sbjct: 111545 cgaagctgtgggatgtaaaaatgcatcggtag 111576
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 1033 bits (521), Expect = 0.0 Identities = 600/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 131201 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 131147 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131146 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 131087 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 131086 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 131027 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131026 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 130967 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130966 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 130907 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130906 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcc 130847 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130846 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 130787 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130786 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 130727 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 130726 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 130667 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 130666 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaag 130607 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| |||| ||||||||| Sbjct: 130606 ctgtgggatgtaaaaaaacatcggtag 130580 Score = 1033 bits (521), Expect = 0.0 Identities = 600/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 102244 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 102298 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 102299 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 102358 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 102359 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 102418 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102419 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 102478 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102479 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 102538 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102539 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcc 102598 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102599 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 102658 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102659 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 102718 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 102719 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 102778 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 102779 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaag 102838 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| |||| ||||||||| Sbjct: 102839 ctgtgggatgtaaaaaaacatcggtag 102865
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 1025 bits (517), Expect = 0.0 Identities = 597/624 (95%), Gaps = 4/624 (0%) Strand = Plus / Plus Query: 4 gcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaaagc 63 |||| ||||| ||||||||||||||| || ||||||||||| ||||||||||||| Sbjct: 612 gcgaatcataagcagtggcttggttaacgg----gaacccaccggagccgtagcgaaagc 667 Query: 64 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 123 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 668 gagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 727 Query: 124 ccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 183 |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 728 ccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 787 Query: 184 gcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccc 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 gcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccc 847 Query: 244 cgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 848 cgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtg 907 Query: 304 cgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaa 363 ||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 908 cgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaa 967 Query: 364 taacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggga 423 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 968 taacaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggga 1027 Query: 424 aacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggg 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1028 aacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggg 1087 Query: 484 gtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatag 543 ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1088 gtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatag 1147 Query: 544 ctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctg 603 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1148 ctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctg 1207 Query: 604 tgggatgtcaaaatgcatcggtag 627 |||||||| ||||||||||||||| Sbjct: 1208 tgggatgtaaaaatgcatcggtag 1231
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 1025 bits (517), Expect = 0.0 Identities = 599/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 134968 ccggcgactaataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 134914 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134913 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 134854 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 134853 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 134794 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134793 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 134734 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134733 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 134674 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 134673 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaataatagatatgacctca 134614 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 134613 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 134554 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134553 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 134494 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134493 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 134434 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 134433 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaag 134374 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 134373 ctgtgggatgtaaaaatacatcggtag 134347 Score = 1025 bits (517), Expect = 0.0 Identities = 599/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 106094 ccggcgactaataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 106148 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106149 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 106208 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 106209 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 106268 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106269 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 106328 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106329 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 106388 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 106389 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaataatagatatgacctca 106448 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106449 aaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 106508 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106509 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 106568 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106569 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 106628 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 106629 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaag 106688 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||| ||||||||| Sbjct: 106689 ctgtgggatgtaaaaatacatcggtag 106715
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 1013 bits (511), Expect = 0.0 Identities = 597/627 (95%), Gaps = 12/627 (1%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 134394 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 134340 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 134339 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 134280 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 134279 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 134220 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134219 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 134160 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134159 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 134100 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 134099 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatccca 134040 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134039 aa-------gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 133987 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133986 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 133927 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 133926 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 133867 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 133866 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 133807 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||||||||||||| Sbjct: 133806 ctgtgggatgtaaaaatgcatcggtag 133780 Score = 1013 bits (511), Expect = 0.0 Identities = 597/627 (95%), Gaps = 12/627 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 105888 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 105942 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105943 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 106002 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 106003 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 106062 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106063 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 106122 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106123 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 106182 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 106183 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatccca 106242 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106243 aa-------gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 106295 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106296 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 106355 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106356 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 106415 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 106416 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 106475 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||||||||||||| Sbjct: 106476 ctgtgggatgtaaaaatgcatcggtag 106502
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 1011 bits (510), Expect = 0.0 Identities = 599/628 (95%), Gaps = 6/628 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 1085 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 1139 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 1199 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 1200 tgaccaggatgaagcttgggtgaaactaagtgagggtccgaaccgactgatgttgaagaa 1259 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 1319 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1320 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 1379 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1380 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcc 1439 Query: 361 aaataacaggggtcaaggtcggccagtgagacgat-gggggataagcttcatcgtcgaga 419 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1440 aaataacaggggtcaaggtcggccagtgagacgatggggggataagcttcatcgtcgaga 1499 Query: 420 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1500 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 1559 Query: 480 gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgta 539 |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1560 aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgta 1619 Query: 540 atagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaa 599 |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 1620 atagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaa 1679 Query: 600 gctgtgggatgtcaaaatgcatcggtag 627 |||||||||||| |||| ||||||||| Sbjct: 1680 gctgtgggatgtaaaaaaacatcggtag 1707
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 1009 bits (509), Expect = 0.0 Identities = 597/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 596 ccggcgactcatacgcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 650 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 651 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 710 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 711 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 770 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 771 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 830 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 831 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 890 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 891 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcc 950 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 951 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtccagag 1010 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1011 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 1070 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 1071 ggggtgcagagacagccaggaggtttgcctaaaagcagccacccttgaaagagtgcgtaa 1130 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| Sbjct: 1131 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaaacgatctgccgaag 1190 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| |||| ||||||||| Sbjct: 1191 ctgtgggatgtaaaaaaacatcggtag 1217
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 1009 bits (509), Expect = 0.0 Identities = 597/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| ||||||| |||||||||| Sbjct: 131277 ccggcgactcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaa 131223 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131222 agcgagtcttcacagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 131163 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 131162 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 131103 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131102 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 131043 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 131042 ccccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcg 130983 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 130982 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 130923 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130922 aaataacaagggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 130863 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130862 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 130803 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 130802 ggggtgcagagacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 130743 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 130742 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 130683 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| |||| | |||||||| Sbjct: 130682 ctgtgggatgtaaaaaagaatcggtag 130656 Score = 1009 bits (509), Expect = 0.0 Identities = 597/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| ||||||| |||||||||| Sbjct: 104117 ccggcgactcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaa 104171 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104172 agcgagtcttcacagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 104231 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 104232 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 104291 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104292 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 104351 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104352 ccccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcg 104411 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104412 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 104471 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104472 aaataacaagggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 104531 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104532 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 104591 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 104592 ggggtgcagagacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 104651 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 104652 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 104711 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| |||| | |||||||| Sbjct: 104712 ctgtgggatgtaaaaaagaatcggtag 104738
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 1001 bits (505), Expect = 0.0 Identities = 561/580 (96%) Strand = Plus / Plus Query: 37 ggaacccaccggnaccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 96 |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 97 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 156 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 157 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 216 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 781 Query: 217 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 841 Query: 277 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 336 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 842 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 901 Query: 337 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 396 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 902 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 961 Query: 397 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 1021 Query: 457 gaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagc 516 |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 1022 gaccgcccagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagc 1081 Query: 517 agccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatga 576 |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 1082 agccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatga 1141 Query: 577 acggggctaagcgatctgccgaagctgtgggatgtcaaaa 616 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 1142 acggggctaagcgatctgccgaagctgtgggatgtaaaaa 1181
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 1001 bits (505), Expect = 0.0 Identities = 596/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||| ||||||| |||||||||| Sbjct: 129940 ccggcgactcataggtagtggcttggttaagggaaa-----ccaccggagccgtagcgaa 129886 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 129885 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 129826 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 129825 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 129766 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129765 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 129706 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 129705 ccccgaaatgcgttgaggcgcagcagttgaccggacatctaggggtaaagcactgtttcg 129646 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 129645 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctga 129586 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 129585 aaataataagggtcaaggtcggccagtgagacgatgagggataagcttcatcgtcgagag 129526 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129525 ggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 129466 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 129465 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 129406 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 129405 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 129346 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| |||||| |||||||| Sbjct: 129345 ctgtgggatgtaaaaatgaatcggtag 129319 Score = 1001 bits (505), Expect = 0.0 Identities = 596/627 (95%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||| ||||||| |||||||||| Sbjct: 102516 ccggcgactcataggtagtggcttggttaagggaaa-----ccaccggagccgtagcgaa 102570 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 102571 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 102630 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 102631 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 102690 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102691 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 102750 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 102751 ccccgaaatgcgttgaggcgcagcagttgaccggacatctaggggtaaagcactgtttcg 102810 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 102811 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctga 102870 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 102871 aaataataagggtcaaggtcggccagtgagacgatgagggataagcttcatcgtcgagag 102930 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102931 ggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 102990 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 102991 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 103050 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 103051 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 103110 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| |||||| |||||||| Sbjct: 103111 ctgtgggatgtaaaaatgaatcggtag 103137
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 997 bits (503), Expect = 0.0 Identities = 600/629 (95%), Gaps = 8/629 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 2358 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 2412 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2413 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 2472 Query: 121 tgaccaggatgaagcttggatgaaactaagcagagg-tccgaaccgactgatgttgaaga 179 ||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||| Sbjct: 2473 tgaccaggatgaagcttgggtgaaactaagtggagggtccgaaccgactgatgttgaaga 2532 Query: 180 atcagcggatgagttgtggttaggggtgaaatg-ccactcgaacccagagctagctggtt 238 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2533 atcagcggatgagttgtggttaggggtgaaatggccactcgaacccagagctagctggtt 2592 Query: 239 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2593 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 2652 Query: 299 cggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 358 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2653 cggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgactc 2712 Query: 359 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 418 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2713 aaaa-taacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgag 2771 Query: 419 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 478 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2772 agggaaacagtccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 2831 Query: 479 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 538 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2832 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 2891 Query: 539 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 598 |||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 2892 aatagcscactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 2951 Query: 599 agctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||| ||||| ||||||||| Sbjct: 2952 agctgtgggatgtaaaaatacatcggtag 2980
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 993 bits (501), Expect = 0.0 Identities = 595/627 (94%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 598 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 652 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 653 agcgagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 712 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 713 tgaccaggatggagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 772 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 832 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 892 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 893 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 952 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 953 aaataacaggggttaaggtcggccagtgagacaatgggggataagcttcatcgtcgagag 1012 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1013 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggta 1072 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||| |||||||||||| |||||||||||||| ||||||||||||| Sbjct: 1073 ggggtgcacagacagccacgaggtttgcctataagcagccacccttgaaagagtgcgtaa 1132 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||| Sbjct: 1133 tagctcactgatcgagcgctcttgcgcccaagatgaacggggctaaacgatctgccgaag 1192 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||||||||||||| Sbjct: 1193 ctgtgggatgtaaaaatgcatcggtag 1219
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 979 bits (494), Expect = 0.0 Identities = 595/628 (94%), Gaps = 6/628 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggna-ccgtagcga 59 |||||||||||||| |||||||||||||||||||| ||||||| | ||||||||| Sbjct: 609 ccggcgactcataggaagtggcttggttaagggaac-----ccaccggaagccgtagcga 663 Query: 60 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 119 ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 664 aagcgagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 723 Query: 120 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 179 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 724 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 783 Query: 180 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 843 Query: 240 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 299 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 844 tccccgaaatgcgttgaggcgcagcagttgactggacatctaagggtaaagcactgtttc 903 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 359 ||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 904 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactaaatatgacctc 963 Query: 360 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 419 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 964 aaaataacaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtccaga 1023 Query: 420 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1024 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 1083 Query: 480 gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgta 539 |||||||| ||||||||| |||||||||||| |||||||||||||| |||||||||||| Sbjct: 1084 aggggtgcacagacagccaagaggtttgcctaaaagcagccacccttgaaagagtgcgta 1143 Query: 540 atagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaa 599 ||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 1144 ataactcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaa 1203 Query: 600 gctgtgggatgtcaaaatgcatcggtag 627 |||||||||||| |||||||||| |||| Sbjct: 1204 gctgtgggatgtaaaaatgcatccgtag 1231
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 971 bits (490), Expect = 0.0 Identities = 590/624 (94%), Gaps = 5/624 (0%) Strand = Plus / Plus Query: 4 gcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaaagc 63 ||||||||||| |||||||||||||||||||| ||| ||| ||||||||||||| Sbjct: 612 gcgactcataggaagtggcttggttaagggaac-----ccaacggagccgtagcgaaagc 666 Query: 64 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 123 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 gagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 726 Query: 124 ccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 183 |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 727 ccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 786 Query: 184 gcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccc 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 gcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccc 846 Query: 244 cgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 847 cgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtg 906 Query: 304 cgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaa 363 ||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 907 cgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaa 966 Query: 364 taacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggga 423 |||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 967 taacaggggttaaggtcggccagtgagaccatgggggataagcttcatcgtccagaggga 1026 Query: 424 aacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggg 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1027 aacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggg 1086 Query: 484 gtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatag 543 ||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1087 gtgcagagacagccaagaggtttgcctagaagcagccacccttgaaagagtgcgtaatag 1146 Query: 544 ctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctg 603 |||||||||| ||||| ||||||| || ||||||||||||||||||||||||||||||| Sbjct: 1147 ctcactgatccagcgctcttgcgcccaaaatgaacggggctaagcgatctgccgaagctg 1206 Query: 604 tgggatgtcaaaatgcatcggtag 627 |||||||| |||||||||| |||| Sbjct: 1207 tgggatgtaaaaatgcatccgtag 1230
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 967 bits (488), Expect = 0.0 Identities = 583/616 (94%), Gaps = 12/616 (1%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 139770 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 139716 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139715 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 139656 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 139655 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 139596 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139595 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 139536 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 139535 ccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcg 139476 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||| || || | Sbjct: 139475 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatctggcctca 139416 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139415 aaa-------ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 139363 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139362 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 139303 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 139302 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 139243 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 139242 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 139183 Query: 601 ctgtgggatgtcaaaa 616 ||||||||||| |||| Sbjct: 139182 ctgtgggatgtaaaaa 139167 Score = 967 bits (488), Expect = 0.0 Identities = 583/616 (94%), Gaps = 12/616 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 110290 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 110344 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110345 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 110404 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 110405 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 110464 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110465 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 110524 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 110525 ccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcg 110584 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||| || || | Sbjct: 110585 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatctggcctca 110644 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110645 aaa-------ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 110697 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110698 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 110757 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 110758 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 110817 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 110818 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 110877 Query: 601 ctgtgggatgtcaaaa 616 ||||||||||| |||| Sbjct: 110878 ctgtgggatgtaaaaa 110893
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 963 bits (486), Expect = 0.0 Identities = 578/610 (94%), Gaps = 12/610 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 75 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 129 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 189 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 190 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 249 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 250 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 309 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 310 ccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcg 369 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||| || || | Sbjct: 370 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatctggcctca 429 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 430 aaa-------ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 482 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 483 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 542 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 543 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 602 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 603 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 662 Query: 601 ctgtgggatg 610 |||||||||| Sbjct: 663 ctgtgggatg 672
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 959 bits (484), Expect = 0.0 Identities = 593/626 (94%), Gaps = 8/626 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 177434 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 177488 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 177489 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 177548 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| Sbjct: 177549 tgaccaggatgaagcttgggtgaaactaagtggaggtccga-ccgactgatgttgaagaa 177607 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 177608 tcagcgggtgagttgtggttaggggtgaaatgccactcgcacccagagctagctggttct 177667 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 177668 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcacggtttcg 177727 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 177728 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctca 177787 Query: 361 aaataacaggggt-caaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 419 |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 177788 aaataagaggggggcaaggtcggctagtgagacgatgggggataagcttcatcgtcgaga 177847 Query: 420 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 479 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177848 gggaaagagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 177907 Query: 480 gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgta 539 |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 177908 aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgta 177967 Query: 540 atagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgat-ctgccga 598 |||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| Sbjct: 177968 atagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatcctgccga 178027 Query: 599 agctgtgggatgtcaaaatgcatcgg 624 ||||||||||||||||||| |||||| Sbjct: 178028 agctgtgggatgtcaaaatacatcgg 178053 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Plus Query: 491 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 550 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Plus Query: 491 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 550 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 445 aggcccctaaatgaccgctcag 466 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 413 gtcgagagggaaacagcccggatc 436 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 413 gtcgagagggaaacagcccggatc 436 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 955 bits (482), Expect = 0.0 Identities = 590/627 (94%), Gaps = 11/627 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 610 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 664 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 665 agcgagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 724 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 725 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 784 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 844 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 845 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 904 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 905 gtgcgggccgcgagagcagtaccaaatcgaggcaaactctgaatactagatatgacc--- 961 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 | |||||||| ||||||||||| |||||||||||||||||||||||||| || |||| Sbjct: 962 ---tcacaggggttaaggtcggccaatgagacgatgggggataagcttcatcttccagag 1018 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1019 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 1078 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1079 ggggtgcaaagacagccacgaggtttgcctagaagcagccacccttgaaagagtgcgtaa 1138 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 600 ||||||||||||||||||| ||||||| || |||||||||||||| ||||||||||||| Sbjct: 1139 tagctcactgatcgagcgctcttgcgcccaaaatgaacggggctaaacgatctgccgaag 1198 Query: 601 ctgtgggatgtcaaaatgcatcggtag 627 ||||||||||| ||||||||||||||| Sbjct: 1199 ctgtgggatgtaaaaatgcatcggtag 1225
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 932 bits (470), Expect = 0.0 Identities = 586/620 (94%), Gaps = 9/620 (1%) Strand = Plus / Plus Query: 12 tagncagtggcttggttaa-gggaacggaacccaccggnaccgtagcgaaagcgagtctt 70 ||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 71 aatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccagg 128 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 129 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 188 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 729 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 788 Query: 189 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc-gaa 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 789 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaa 848 Query: 248 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 908 Query: 308 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataac 367 | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 909 ccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaaataac 968 Query: 368 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 427 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 aagggtcaaggtcggcaagtgagacgatgggggataagcttcatcgtcgagagggaaaca 1028 Query: 428 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgc 487 |||| ||||||| |||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 1029 gccctgatcacccgctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgc 1088 Query: 488 aaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctca 547 | |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||| Sbjct: 1089 agagacagccaggaggtttg-ctataagcagccacccttgaaagagtgcgtaatagctca 1147 Query: 548 ctgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 607 |||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 1148 ctgatcgagcgctcttgcgccgaagatgaacggggctaagtgatctgccgaagctgtggg 1207 Query: 608 atgtcaaaatgcatcggtag 627 |||| |||| |||||||||| Sbjct: 1208 atgtaaaaaggcatcggtag 1227
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 928 bits (468), Expect = 0.0 Identities = 563/596 (94%), Gaps = 12/596 (2%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 91 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 145 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 146 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 205 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 206 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 265 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 266 tcagcggatgagttgtggttaggggtgaaatgccgctcgaacccagagctagctggttct 325 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 326 ccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcg 385 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||| || || | Sbjct: 386 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatctggcctca 445 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 446 aaa-------ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 498 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 558 Query: 481 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 540 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 559 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 618 Query: 541 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgcc 596 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 619 tagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgcc 674
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 926 bits (467), Expect = 0.0 Identities = 480/485 (98%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 500 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 559 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 619 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 620 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 679 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 680 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 739 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 799 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 800 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 859 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 860 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 919 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 920 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 979 Query: 481 ggggt 485 ||||| Sbjct: 980 ggggt 984
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 912 bits (460), Expect = 0.0 Identities = 579/618 (93%), Gaps = 6/618 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||| ||||||||||||||||| ||||||| || ||||||| Sbjct: 589 ccggcgactcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaa 643 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 ||||||| || ||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 agcgagtattcataggactattgtcactgcttatggacccgaacctgggtgatctatcca 703 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||| Sbjct: 704 tgaccaggatgaagctttggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 763 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 823 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 824 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttca 883 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag-atatgaccca 359 |||||||| | | ||||||||||||||||| |||||||||||||||||| |||||||| | Sbjct: 884 gtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatactagaatatgaccta 943 Query: 360 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 419 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 944 aaaataacaggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 1003 Query: 420 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 479 |||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 1004 gggaaacagcccagatcaccagctaaggcccctaattgatcgctcagtgataaaggaggt 1063 Query: 480 gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgta 539 |||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 1064 aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaatagtgcgta 1123 Query: 540 atagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaa 599 |||||| ||||||||||||| ||||||| |||||| ||||||||||||||||| |||||| Sbjct: 1124 atagcttactgatcgagcgctcttgcgccgaagattaacggggctaagcgatccgccgaa 1183 Query: 600 gctgtgggatgtcaaaat 617 |||||||||||| ||||| Sbjct: 1184 gctgtgggatgtaaaaat 1201
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 910 bits (459), Expect = 0.0 Identities = 588/629 (93%), Gaps = 7/629 (1%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||| ||||||||||||||||| ||||||| || ||||||| Sbjct: 52096 ccggcgactcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaa 52042 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 ||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 52041 agcgagtattcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 51982 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 51981 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 51922 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51921 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 51862 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51861 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttca 51802 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag-atatgaccca 359 |||||||| | | ||||||||||||||||| |||||||||||||||||| |||||||| | Sbjct: 51801 gtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatactagaatatgaccta 51742 Query: 360 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 419 |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51741 caaataataggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 51682 Query: 420 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg- 478 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 51681 gggaaacagcccggatcaccagctaaggcccctaattgatcgctcagtgataaaggaggt 51622 Query: 479 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 538 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 51621 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 51562 Query: 539 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 598 ||||||| ||||||||||||| ||||||| ||| ||||||||||||||||||| ||||| Sbjct: 51561 aatagcttactgatcgagcgctcttgcgccgaatatgaacggggctaagcgattcgccga 51502 Query: 599 agctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||| |||| ||||||||| Sbjct: 51501 agctgtgggatgtaaaaagacatcggtag 51473 Score = 910 bits (459), Expect = 0.0 Identities = 588/629 (93%), Gaps = 7/629 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||| ||||||||||||||||| ||||||| || ||||||| Sbjct: 37732 ccggcgactcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaa 37786 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 ||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 37787 agcgagtattcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 37846 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 37847 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 37906 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37907 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 37966 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37967 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttca 38026 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag-atatgaccca 359 |||||||| | | ||||||||||||||||| |||||||||||||||||| |||||||| | Sbjct: 38027 gtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatactagaatatgaccta 38086 Query: 360 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 419 |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38087 caaataataggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 38146 Query: 420 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg- 478 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 38147 gggaaacagcccggatcaccagctaaggcccctaattgatcgctcagtgataaaggaggt 38206 Query: 479 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 538 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 38207 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 38266 Query: 539 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 598 ||||||| ||||||||||||| ||||||| ||| ||||||||||||||||||| ||||| Sbjct: 38267 aatagcttactgatcgagcgctcttgcgccgaatatgaacggggctaagcgattcgccga 38326 Query: 599 agctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||| |||| ||||||||| Sbjct: 38327 agctgtgggatgtaaaaagacatcggtag 38355
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 910 bits (459), Expect = 0.0 Identities = 588/629 (93%), Gaps = 7/629 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| |||||| ||||||||||||| ||||||| |||||||||| Sbjct: 592 ccggcgacttataggtagtggcctggttaagggaac-----ccaccggagccgtagcgaa 646 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 647 agcgagtcttcctagggcaattgtcactacttatggacccgaacctgggtgatctatcca 706 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 707 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 766 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 826 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 827 ccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttc 886 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 359 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 887 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatccc 946 Query: 360 aaaataacagggg-tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 418 |||||||||||| | |||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 947 caaataacaggggataaaggtcaaccagtgagacggtgggggataagcttcatcgtcaag 1006 Query: 419 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 478 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1007 agggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggagg 1066 Query: 479 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 538 | || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1067 taggagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1126 Query: 539 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 598 ||||||||||||||| ||||| ||||||| ||||||||||||| ||||||| |||||||| Sbjct: 1127 aatagctcactgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccga 1186 Query: 599 agctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||| ||||||||| Sbjct: 1187 agctgtgggatgtcaaaatacatcggtag 1215
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 910 bits (459), Expect = 0.0 Identities = 588/629 (93%), Gaps = 7/629 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||| ||||||||||||||||| ||||||| || ||||||| Sbjct: 4660 ccggcgactcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaa 4714 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 ||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4715 agcgagtattcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 4774 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 4775 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 4834 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4835 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 4894 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4895 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttca 4954 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag-atatgaccca 359 |||||||| | | ||||||||||||||||| |||||||||||||||||| |||||||| | Sbjct: 4955 gtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatactagaatatgaccta 5014 Query: 360 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 419 |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5015 caaataataggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 5074 Query: 420 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg- 478 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 5075 gggaaacagcccggatcaccagctaaggcccctaattgatcgctcagtgataaaggaggt 5134 Query: 479 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 538 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5135 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 5194 Query: 539 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 598 ||||||| ||||||||||||| ||||||| ||| ||||||||||||||||||| ||||| Sbjct: 5195 aatagcttactgatcgagcgctcttgcgccgaatatgaacggggctaagcgattcgccga 5254 Query: 599 agctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||| |||| ||||||||| Sbjct: 5255 agctgtgggatgtaaaaagacatcggtag 5283
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 892 bits (450), Expect = 0.0 Identities = 460/464 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 385 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 444 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 504 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 505 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 564 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 624 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 625 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 684 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 685 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 744 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 804 Query: 421 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 464 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 805 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 848
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 880 bits (444), Expect = 0.0 Identities = 584/628 (92%), Gaps = 10/628 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||||||||||||||||| ||||||| ||||||||| Sbjct: 86855 ccggcgacttataggcagtggcttggttaagggaac-----ccaccggagccgtagcgag 86909 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86910 agcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatcca 86969 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 86970 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 87029 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87030 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 87089 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttc 299 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 87090 ccccgaaatgcgttgaggcgcagcagttgactggaccatctaggggtaaagcactgtttc 87149 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 359 ||| ||||| ||| |||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 87150 ggtacgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat-tgcccc- 87207 Query: 360 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 419 ||||| |||||| | |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 87208 --aataaaaggggtaagggtcaaccagtgagacgatgggggataagcttcatcgtcgaga 87265 Query: 420 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 479 ||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 87266 ggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgatgaaggaagt 87325 Query: 480 gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgta 539 | |||||||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 87326 acgagtgcaaagacagccaggaggtttgcctagaagcagccaaccttgaaagagtgcgta 87385 Query: 540 atagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaa 599 |||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 87386 atagctcactgatcgagcgctcttgcgccgaagatgaacgggactaagcgatctgccgaa 87445 Query: 600 gctgtgggatgtcaaaatgcatcggtag 627 |||||||||||||||||| ||||||||| Sbjct: 87446 gctgtgggatgtcaaaatacatcggtag 87473
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 878 bits (443), Expect = 0.0 Identities = 584/629 (92%), Gaps = 7/629 (1%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| |||||| ||||||||||||| ||||||| |||||||||| Sbjct: 117557 ccggcgacttataggtagtggcctggttaagggaac-----ccaccggagccgtagcgaa 117503 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| |||||| ||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 117502 agcgagtcttcctagggcaattgtcactacttatggacccgaacctgggtgatctaacca 117443 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 117442 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 117383 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117382 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 117323 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 117322 ccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttc 117263 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 359 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 117262 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatccc 117203 Query: 360 aaaataaca-ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 418 |||||| | ||||| | |||| ||||||||||| ||||||||||||||||||||| || Sbjct: 117202 caaataatagggggtaatggtcaaccagtgagacggtgggggataagcttcatcgtcaag 117143 Query: 419 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 478 ||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 117142 agggaaacagcccagatcaccagctaaggcccctaaatgaccgctaagtggtaaaggagg 117083 Query: 479 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 538 | || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 117082 taggagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 117023 Query: 539 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 598 ||||||||||||||| ||||| ||||||| ||||||||||||| ||||||| |||||||| Sbjct: 117022 aatagctcactgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccga 116963 Query: 599 agctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||| ||||||||| Sbjct: 116962 agctgtgggatgtcaaaatacatcggtag 116934 Score = 878 bits (443), Expect = 0.0 Identities = 584/629 (92%), Gaps = 7/629 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| |||||| ||||||||||||| ||||||| |||||||||| Sbjct: 90545 ccggcgacttataggtagtggcctggttaagggaac-----ccaccggagccgtagcgaa 90599 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| |||||| ||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 90600 agcgagtcttcctagggcaattgtcactacttatggacccgaacctgggtgatctaacca 90659 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 90660 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 90719 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90720 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 90779 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 90780 ccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttc 90839 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 359 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 90840 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatccc 90899 Query: 360 aaaataaca-ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 418 |||||| | ||||| | |||| ||||||||||| ||||||||||||||||||||| || Sbjct: 90900 caaataatagggggtaatggtcaaccagtgagacggtgggggataagcttcatcgtcaag 90959 Query: 419 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 478 ||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 90960 agggaaacagcccagatcaccagctaaggcccctaaatgaccgctaagtggtaaaggagg 91019 Query: 479 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 538 | || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 91020 taggagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 91079 Query: 539 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 598 ||||||||||||||| ||||| ||||||| ||||||||||||| ||||||| |||||||| Sbjct: 91080 aatagctcactgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccga 91139 Query: 599 agctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||| ||||||||| Sbjct: 91140 agctgtgggatgtcaaaatacatcggtag 91168
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 864 bits (436), Expect = 0.0 Identities = 446/450 (99%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 593 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 652 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 653 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 712 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 772 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 832 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 892 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 952 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 953 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 1012 Query: 421 ggaaacagcccggatcaccagctaaggccc 450 |||||||||||||||||||||||||||||| Sbjct: 1013 ggaaacagcccggatcaccagctaaggccc 1042
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 854 bits (431), Expect = 0.0 Identities = 552/590 (93%), Gaps = 2/590 (0%) Strand = Plus / Plus Query: 40 acccaccggnaccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 99 ||||||||| |||||||||||||||||||| | |||| ||||||||| |||||||||| Sbjct: 626 acccaccggagccgtagcgaaagcgagtcttcctggggcaattgtcactacttatggacc 685 Query: 100 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 159 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||| Sbjct: 686 cgaacctgggtgatctatccatgaccaggatgaagctcgggtgaaactaagtggaggtcc 745 Query: 160 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 219 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 805 Query: 220 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 278 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 806 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactat 865 Query: 279 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 338 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 866 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaact 925 Query: 339 ctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccagtgagacgatgg 397 ||||||||||||||||| | |||||| |||| | | |||| ||||||||||| ||| Sbjct: 926 ctgaatactagatatgatctccgaataacgggggataagggtcaaccagtgagacggtgg 985 Query: 398 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 457 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 986 gggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatg 1045 Query: 458 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 517 ||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 1046 accgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagca 1105 Query: 518 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 577 ||||||||| |||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 1106 gccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaa 1165 Query: 578 cggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 627 |||| ||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 1166 cgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtag 1215
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 846 bits (427), Expect = 0.0 Identities = 585/634 (92%), Gaps = 12/634 (1%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||| ||||||||||||| ||||||| |||||||||| Sbjct: 145967 ccggcgacttataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaa 145913 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 145912 agcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 145853 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 145852 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 145793 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 145792 tcagcggatgagttgtggttaggggtgaaatgccaatcgaacccagagctagctggttct 145733 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 145732 ccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttc 145673 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga--cc 357 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 145672 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatgatctc 145613 Query: 358 caa---aaataacagg-ggtcaaggtcggccagtgagacgatgggggataagcttcatcg 413 ||| ||| |||||| ||| |||||| |||||||||||| ||||||||||||||||||| Sbjct: 145612 caaatgaaagaacaggaggtaaaggtcagccagtgagacggtgggggataagcttcatcg 145553 Query: 414 tcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaa 473 ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| | || Sbjct: 145552 tcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtgaa 145493 Query: 474 ggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagag 533 |||||| || ||||| |||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 145492 ggaggtaggagtgcagagacagccaggaagtttgcctagaagcagccacccttgaaagag 145433 Query: 534 tgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatct 593 |||||||||||||||||||| ||||| ||||||| ||| ||||||||| ||||||| ||| Sbjct: 145432 tgcgtaatagctcactgatcaagcgctcttgcgccgaaaatgaacgggactaagcggtct 145373 Query: 594 gccgaagctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||| ||||||||| Sbjct: 145372 gccgaagctgtgggatgtcaaaaaacatcggtag 145339 Score = 846 bits (427), Expect = 0.0 Identities = 585/634 (92%), Gaps = 12/634 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||| ||||||||||||| ||||||| |||||||||| Sbjct: 112495 ccggcgacttataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaa 112549 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 112550 agcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 112609 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 112610 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 112669 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 112670 tcagcggatgagttgtggttaggggtgaaatgccaatcgaacccagagctagctggttct 112729 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 112730 ccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttc 112789 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga--cc 357 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 112790 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatgatctc 112849 Query: 358 caa---aaataacagg-ggtcaaggtcggccagtgagacgatgggggataagcttcatcg 413 ||| ||| |||||| ||| |||||| |||||||||||| ||||||||||||||||||| Sbjct: 112850 caaatgaaagaacaggaggtaaaggtcagccagtgagacggtgggggataagcttcatcg 112909 Query: 414 tcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaa 473 ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| | || Sbjct: 112910 tcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtgaa 112969 Query: 474 ggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagag 533 |||||| || ||||| |||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 112970 ggaggtaggagtgcagagacagccaggaagtttgcctagaagcagccacccttgaaagag 113029 Query: 534 tgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatct 593 |||||||||||||||||||| ||||| ||||||| ||| ||||||||| ||||||| ||| Sbjct: 113030 tgcgtaatagctcactgatcaagcgctcttgcgccgaaaatgaacgggactaagcggtct 113089 Query: 594 gccgaagctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||| ||||||||| Sbjct: 113090 gccgaagctgtgggatgtcaaaaaacatcggtag 113123
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 839 bits (423), Expect = 0.0 Identities = 579/628 (92%), Gaps = 9/628 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||||||||||||||||| ||||||| ||||||||| Sbjct: 88941 ccggcgacttataggcagtggcttggttaagggaac-----ccaccggagccgtagcgag 88995 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 88996 agcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatcca 89055 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 89056 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 89115 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89116 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 89175 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttc 299 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 89176 ccccgaaatgcgttgaggcgcagcagttgactggaccatctaggggtaaagcactgtttc 89235 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 359 ||| ||||| || |||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 89236 ggtacgggccacgagagcggtaccaaatcgaggcaaactctgaatactagat-tacccca 89294 Query: 360 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 419 | | || ||||| | |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 89295 ata--aaagggggtaagggtcaaccagtgagacgatgggggataagcttcatcgtcgaga 89352 Query: 420 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 479 ||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 89353 ggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgatgaaggaagt 89412 Query: 480 gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgta 539 | |||||||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 89413 acgagtgcaaagacagccaggaggtttgcctagaagcagccaaccttgaaagagtgcgta 89472 Query: 540 atagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaa 599 |||||||||||||||||||| | ||||| ||||||||||||| ||||||||||||||||| Sbjct: 89473 atagctcactgatcgagcgctcgtgcgccgaagatgaacgggactaagcgatctgccgaa 89532 Query: 600 gctgtgggatgtcaaaatgcatcggtag 627 |||||||||||| ||||| ||||||||| Sbjct: 89533 gctgtgggatgtaaaaatacatcggtag 89560
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 807 bits (407), Expect = 0.0 Identities = 575/629 (91%), Gaps = 7/629 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||| ||||||||||||| ||||||| |||||||||| Sbjct: 596 ccggcgacttataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaa 650 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 ||| |||||| | |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 651 agcaagtcttcctggggcaattgtcactgcttatggacccgaacctgggtgatctatcca 710 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 711 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 770 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 771 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 830 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 831 ccccgaaatgcgttgaggcgcagcagttgactagactatctaggggtaaagcactgtttc 890 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 359 ||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||| | Sbjct: 891 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactggataggactcc 950 Query: 360 aaaataacag-gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 418 ||||| || | || | |||| |||||||||| ||||||||||||||||| |||||| Sbjct: 951 ctaataatagagagtaagggtcaaccagtgagacagtgggggataagcttcattgtcgag 1010 Query: 419 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 478 |||| |||||||| ||||||| ||||||||||||||||||||||| |||| ||||||||| Sbjct: 1011 aggggaacagcccagatcaccggctaaggcccctaaatgaccgctaagtggtaaaggagg 1070 Query: 479 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 538 | || |||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1071 taggagtgcaaagacagccaggaggtttgcctagaagcagccatccttgaaagagtgcgt 1130 Query: 539 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 598 ||||||||||||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||| Sbjct: 1131 aatagctcactgatcaagcgctcttgcgccgaagatgaatgggactaagcggtctgccga 1190 Query: 599 agctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||| ||||||||| Sbjct: 1191 agctgtgggatgtcaaaatacatcggtag 1219
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 805 bits (406), Expect = 0.0 Identities = 564/616 (91%), Gaps = 6/616 (0%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||| ||||||||||||| ||||||| |||||||||| Sbjct: 127849 ccggcgactcataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaa 127795 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct: 127794 agcgagtcttcctagggcaattgtcactgctcatggacccgaacctgggtgatctatcca 127735 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| | |||||||| ||||||||||||||||||||||||| || Sbjct: 127734 tgaccaggatgaagcttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaa 127675 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127674 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 127615 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 ||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||| Sbjct: 127614 ccccgaaatgcgttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttc 127555 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 359 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 127554 ggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggtatgacccc 127495 Query: 360 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 419 || ||| ||| | |||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 127494 cgaagaacggggaaaagggtcaaccagtgagacgatgggggataagcttcattgtcgaga 127435 Query: 420 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 479 ||| |||||||| ||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 127434 ggggaacagcccagatcaccagctaaggcccctaaatgactgctcagtggtaaaggaggt 127375 Query: 480 gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgta 539 || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 127374 aggagtgcaaagacagccaggaggtttgcctagaagcagccacccttaaaagagtgcgta 127315 Query: 540 atagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaa 599 |||||||||||||| ||||| ||| ||| ||| ||||||||| ||||| | ||||||||| Sbjct: 127314 atagctcactgatcaagcgctcttacgccgaaaatgaacgggactaagtggtctgccgaa 127255 Query: 600 gctgtgggatgtcaaa 615 |||||| ||||||||| Sbjct: 127254 gctgtgagatgtcaaa 127239 Score = 805 bits (406), Expect = 0.0 Identities = 564/616 (91%), Gaps = 6/616 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||| ||||||||||||| ||||||| |||||||||| Sbjct: 95598 ccggcgactcataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaa 95652 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct: 95653 agcgagtcttcctagggcaattgtcactgctcatggacccgaacctgggtgatctatcca 95712 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| | |||||||| ||||||||||||||||||||||||| || Sbjct: 95713 tgaccaggatgaagcttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaa 95772 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95773 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 95832 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 ||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||| Sbjct: 95833 ccccgaaatgcgttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttc 95892 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 359 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95893 ggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggtatgacccc 95952 Query: 360 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 419 || ||| ||| | |||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 95953 cgaagaacggggaaaagggtcaaccagtgagacgatgggggataagcttcattgtcgaga 96012 Query: 420 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 479 ||| |||||||| ||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 96013 ggggaacagcccagatcaccagctaaggcccctaaatgactgctcagtggtaaaggaggt 96072 Query: 480 gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgta 539 || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 96073 aggagtgcaaagacagccaggaggtttgcctagaagcagccacccttaaaagagtgcgta 96132 Query: 540 atagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaa 599 |||||||||||||| ||||| ||| ||| ||| ||||||||| ||||| | ||||||||| Sbjct: 96133 atagctcactgatcaagcgctcttacgccgaaaatgaacgggactaagtggtctgccgaa 96192 Query: 600 gctgtgggatgtcaaa 615 |||||| ||||||||| Sbjct: 96193 gctgtgagatgtcaaa 96208
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 733 bits (370), Expect = 0.0 Identities = 383/388 (98%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 388 ccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaa 329 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 269 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 209 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 149 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 89 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 29 Query: 361 aaataacaggggtcaaggtcggccagtg 388 |||||||||||||||||||||||||||| Sbjct: 28 aaataacaggggtcaaggtcggccagtg 1
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 680 bits (343), Expect = 0.0 Identities = 548/613 (89%), Gaps = 8/613 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||||||| ||||||||||||||||| ||||| ||||| | ||||||| Sbjct: 595 ccggcgactcataagtagtggcttggttaaggg----gaacc-accggagtcatagcgaa 649 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 ||| |||||| ||||||| | ||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 650 agcaagtcttcatagggcaaatgtcattgcttatggacccgaacttgggtgatctaacca 709 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||| |||||| |||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 710 tgaccaagatgaaatttggttgaaactaagtggaggtccgaaccgactgatgttgaagaa 769 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 ||||||||||||||||||||||||||||||||||| || |||||| |||||| ||||||| Sbjct: 770 tcagcggatgagttgtggttaggggtgaaatgccaatcaaacccaaagctagttggttct 829 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||| |||||||| |||| || ||||||||||||||||||||||||||| Sbjct: 830 ccccgaaatgcgtttaggcgcagaagtt-accagacatctaggggtaaagcactgtttcg 888 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc--c 358 || |||| ||| |||| ||||||||| |||||||||| |||||||||||||||||| | Sbjct: 889 gttcgggtcgcgagagccgtaccaaattgaggcaaactatgaatactagatatgacctcc 948 Query: 359 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 418 ||||||||||||| | ||||| | |||||||||| ||||||||||||||||||||||||| Sbjct: 949 aaaaataacagggataaaggtggaccagtgagaccatgggggataagcttcatcgtcgag 1008 Query: 419 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 478 |||| |||||||| ||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 1009 aggggaacagcccagatcaccagctaaggcccctaaatgaccgctaagttataaaggagg 1068 Query: 479 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 538 | |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1069 taggggtgcatagacaaccaggaggtttgcctagaagaagccaccctttaaagagtgcgt 1128 Query: 539 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 598 ||||||| ||||||||||||| ||||||| ||| ||||| ||| ||||||| | ||||| Sbjct: 1129 aatagctaactgatcgagcgctcttgcgccgaatatgaatgggaataagcgacccgccga 1188 Query: 599 agctgtgggatgt 611 ||||||||||||| Sbjct: 1189 agctgtgggatgt 1201
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 670 bits (338), Expect = 0.0 Identities = 390/408 (95%), Gaps = 5/408 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 46847 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 46901 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 46902 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 46961 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 46962 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 47021 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47022 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 47081 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47082 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 47141 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 360 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47142 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcc 47201 Query: 361 aaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 408 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47202 aaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 47249
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 666 bits (336), Expect = 0.0 Identities = 401/422 (95%), Gaps = 6/422 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 364772 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 364826 Query: 61 ag-cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 119 || |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 364827 aggcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatct 364886 Query: 120 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 179 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| | Sbjct: 364887 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaa 364946 Query: 180 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364947 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 365006 Query: 240 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365007 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 365066 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 359 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365067 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctc 365126 Query: 360 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 419 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 365127 aaaataacaggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgaga 365186 Query: 420 gg 421 || Sbjct: 365187 gg 365188 Score = 198 bits (100), Expect = 2e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 416 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 475 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 476 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 534 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 535 gcgtaatagctcactg 550 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Minus Query: 491 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 550 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 413 gtcgagagggaaacagcccggatc 436 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 660 bits (333), Expect = 0.0 Identities = 519/579 (89%), Gaps = 3/579 (0%) Strand = Plus / Minus Query: 37 ggaacccaccggnaccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 96 |||||||||||| |||||||||||||||||||| ||||| | |||| |||||||||| Sbjct: 138645 ggaacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatgg 138586 Query: 97 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 156 ||||||||| ||||||||||||||||||||||||||||||||||| ||| | | |||| Sbjct: 138585 acccgaacccgggtgatctatccatgaccaggatgaagcttggatagaaccaggtggagg 138526 Query: 157 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 216 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 138525 tccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtgaaatgccac 138466 Query: 217 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact-gga 275 |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 138465 tcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactaggc 138406 Query: 276 catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 335 | || | |||||||||||||| |||||||||||||| |||| |||||||| |||||||| Sbjct: 138405 tacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaa 138346 Query: 336 actctgaatactagatatgacccaaaaataaca--ggggtcaaggtcggccagtgagacg 393 |||||||||||| | |||| ||| | | | ||| |||| ||||||||||||||||||| Sbjct: 138345 actctgaatactgggtatggccccagagtcacacgagggtgaaggtcggccagtgagacg 138286 Query: 394 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 453 |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 138285 gtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctg 138226 Query: 454 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 513 ||||||||||||||| | |||||||| || |||||||||||||| ||||||||||| ||| Sbjct: 138225 aatgaccgctcagtggtgaaggaggtaggagtgcaaagacagccgggaggtttgcccaga 138166 Query: 514 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 573 ||||||||||||| |||||||||||| ||||||||||||| ||||| | ||||| || || Sbjct: 138165 agcagccacccttgaaagagtgcgtagtagctcactgatcaagcgctcctgcgccgagga 138106 Query: 574 tgaacggggctaagcgatctgccgaagctgtgggatgtc 612 |||||||| ||||||| |||||||||||||||||||||| Sbjct: 138105 tgaacgggactaagcggtctgccgaagctgtgggatgtc 138067 Score = 660 bits (333), Expect = 0.0 Identities = 519/579 (89%), Gaps = 3/579 (0%) Strand = Plus / Plus Query: 37 ggaacccaccggnaccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 96 |||||||||||| |||||||||||||||||||| ||||| | |||| |||||||||| Sbjct: 83232 ggaacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatgg 83291 Query: 97 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 156 ||||||||| ||||||||||||||||||||||||||||||||||| ||| | | |||| Sbjct: 83292 acccgaacccgggtgatctatccatgaccaggatgaagcttggatagaaccaggtggagg 83351 Query: 157 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 216 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 83352 tccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtgaaatgccac 83411 Query: 217 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact-gga 275 |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 83412 tcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactaggc 83471 Query: 276 catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 335 | || | |||||||||||||| |||||||||||||| |||| |||||||| |||||||| Sbjct: 83472 tacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaa 83531 Query: 336 actctgaatactagatatgacccaaaaataaca--ggggtcaaggtcggccagtgagacg 393 |||||||||||| | |||| ||| | | | ||| |||| ||||||||||||||||||| Sbjct: 83532 actctgaatactgggtatggccccagagtcacacgagggtgaaggtcggccagtgagacg 83591 Query: 394 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 453 |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 83592 gtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctg 83651 Query: 454 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 513 ||||||||||||||| | |||||||| || |||||||||||||| ||||||||||| ||| Sbjct: 83652 aatgaccgctcagtggtgaaggaggtaggagtgcaaagacagccgggaggtttgcccaga 83711 Query: 514 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 573 ||||||||||||| |||||||||||| ||||||||||||| ||||| | ||||| || || Sbjct: 83712 agcagccacccttgaaagagtgcgtagtagctcactgatcaagcgctcctgcgccgagga 83771 Query: 574 tgaacggggctaagcgatctgccgaagctgtgggatgtc 612 |||||||| ||||||| |||||||||||||||||||||| Sbjct: 83772 tgaacgggactaagcggtctgccgaagctgtgggatgtc 83810
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 632 bits (319), Expect = e-178 Identities = 455/499 (91%), Gaps = 1/499 (0%) Strand = Plus / Minus Query: 125 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 184 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 185 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 244 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 245 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 304 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 305 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 364 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 365 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 424 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 425 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 484 ||| || |||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2812 acaacctggatcaccagctaaggcccctaaatgactgctcagtgataaaggaggtagggg 2753 Query: 485 tgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagc 544 ||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| Sbjct: 2752 tgcaaagacagccaggaggtttgcctagaagcaaccacccttgaaaaagtgcgtaatagc 2693 Query: 545 tcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgt 604 ||||| ||||||||| ||||| | |||||||| ||||||||||||||| |||||| | Sbjct: 2692 tcactaatcgagcgcacttgcaccaaagatgaattgggctaagcgatctgttgaagctat 2633 Query: 605 gggatgtcaaaatgcatcg 623 ||||||||||||||||||| Sbjct: 2632 gggatgtcaaaatgcatcg 2614 Score = 95.6 bits (48), Expect = 2e-16 Identities = 88/102 (86%), Gaps = 5/102 (4%) Strand = Plus / Minus Query: 5 cgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaaagcg 64 |||||||||| ||||||||||||||||||||| ||||||| || ||||||||||| Sbjct: 3216 cgactcataggcagtggcttggttaagggaac-----ccaccggagccatagcgaaagcg 3162 Query: 65 agtcttaatagggcgattgtcactgcttatggacccgaacct 106 |||| ||| |||| ||| ||||||||||||||||||||||| Sbjct: 3161 agtcagaatggggcaattctcactgcttatggacccgaacct 3120
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 609 bits (307), Expect = e-171 Identities = 307/307 (100%) Strand = Plus / Minus Query: 321 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 381 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 441 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 340 Query: 501 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 280 Query: 561 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 220 Query: 621 tcggtag 627 ||||||| Sbjct: 219 tcggtag 213
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 587 bits (296), Expect = e-164 Identities = 342/356 (96%), Gaps = 1/356 (0%) Strand = Plus / Plus Query: 272 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 331 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 332 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 391 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 392 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 452 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 511 ||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 497 taaatgatcgctcagtgataaaggaggtaggggtgc-gagacagccaggaggtttgccta 555 Query: 512 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 571 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 556 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 615 Query: 572 gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 627 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 616 gatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtag 671 Score = 379 bits (191), Expect = e-102 Identities = 211/218 (96%) Strand = Plus / Plus Query: 37 ggaacccaccggnaccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 96 |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 81 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 140 Query: 97 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 156 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 141 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 200 Query: 157 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 216 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 260 Query: 217 tcgaacccagagctagctggttctccccgaaatgcgtt 254 |||||||||||||||||||||||||||||||||||||| Sbjct: 261 tcgaacccagagctagctggttctccccgaaatgcgtt 298
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 573 bits (289), Expect = e-160 Identities = 289/289 (100%) Strand = Plus / Plus Query: 339 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 399 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 459 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 180 Query: 519 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 240 Query: 579 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 289
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 545 bits (275), Expect = e-152 Identities = 333/353 (94%), Gaps = 5/353 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| ||||||| |||||||||| Sbjct: 4820 ccggcgactcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaa 4874 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4875 agcgagtcttcatagggctattgtcactgcttatggacccgaacctgggtgatctatcca 4934 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| || Sbjct: 4935 tgaccaggatgaagcttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 4994 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 4995 tcagcggatgagttgtggttagcggtgaaatgccactcgaacccagagctagctggttct 5054 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5055 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 5114 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatat 353 | |||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 5115 gcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatat 5167 Score = 408 bits (206), Expect = e-111 Identities = 239/250 (95%) Strand = Plus / Plus Query: 378 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 438 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 497 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 5301 Query: 498 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 557 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5302 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 5361 Query: 558 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 617 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 5362 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 5421 Query: 618 gcatcggtag 627 | |||||||| Sbjct: 5422 gaatcggtag 5431
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 545 bits (275), Expect = e-152 Identities = 333/353 (94%), Gaps = 5/353 (1%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| ||||||| |||||||||| Sbjct: 23105 ccggcgactcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaa 23051 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23050 agcgagtcttcatagggctattgtcactgcttatggacccgaacctgggtgatctatcca 22991 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| || Sbjct: 22990 tgaccaggatgaagcttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 22931 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 22930 tcagcggatgagttgtggttagcggtgaaatgccactcgaacccagagctagctggttct 22871 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22870 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 22811 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatat 353 | |||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 22810 gcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatat 22758 Score = 408 bits (206), Expect = e-111 Identities = 239/250 (95%) Strand = Plus / Minus Query: 378 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 438 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 497 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 22624 Query: 498 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 557 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22623 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 22564 Query: 558 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 617 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 22563 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 22504 Query: 618 gcatcggtag 627 | |||||||| Sbjct: 22503 gaatcggtag 22494
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 539 bits (272), Expect = e-150 Identities = 336/358 (93%), Gaps = 5/358 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| ||||||| |||||||||| Sbjct: 5088 ccggcgactcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaa 5142 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5143 agcgagtcttcatagggctattgtcactgcttatggacccgaacctgggtgatctatcca 5202 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||| || | |||||||||| ||||||||||||||||||||||||| || Sbjct: 5203 tgaccaggatgaagtttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 5262 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 5263 tcagcggatgagttgtggttagcggtgaaatgccaatcgaacccagagctagctggttct 5322 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5323 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 5382 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 358 | |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5383 gcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 5440 Score = 410 bits (207), Expect = e-111 Identities = 247/259 (95%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 370 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 428 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 429 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 488 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 489 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 548 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 549 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 608 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 609 tgtcaaaatgcatcggtag 627 ||| |||||| |||||||| Sbjct: 5685 tgtaaaaatgaatcggtag 5703
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 539 bits (272), Expect = e-150 Identities = 336/358 (93%), Gaps = 5/358 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| ||||||| |||||||||| Sbjct: 5088 ccggcgactcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaa 5142 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5143 agcgagtcttcatagggctattgtcactgcttatggacccgaacctgggtgatctatcca 5202 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||| || | |||||||||| ||||||||||||||||||||||||| || Sbjct: 5203 tgaccaggatgaagtttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 5262 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 5263 tcagcggatgagttgtggttagcggtgaaatgccaatcgaacccagagctagctggttct 5322 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5323 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 5382 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 358 | |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5383 gcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 5440 Score = 410 bits (207), Expect = e-111 Identities = 247/259 (95%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 370 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 428 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 429 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 488 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 489 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 548 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 549 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 608 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 609 tgtcaaaatgcatcggtag 627 ||| |||||| |||||||| Sbjct: 5685 tgtaaaaatgaatcggtag 5703
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 531 bits (268), Expect = e-148 Identities = 330/350 (94%), Gaps = 6/350 (1%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||| ||||||||||| | ||||||| |||||||||| Sbjct: 115619 ccggcgacttataggcagtggcctggttaagggagc-----ccaccggagccgtagcgaa 115565 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 115564 agcgagtcttcttagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 115505 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 115504 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 115445 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115444 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 115385 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 115384 ccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttc 115325 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 349 ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 115324 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactag 115275 Score = 531 bits (268), Expect = e-148 Identities = 330/350 (94%), Gaps = 6/350 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||| ||||||||||| | ||||||| |||||||||| Sbjct: 86501 ccggcgacttataggcagtggcctggttaagggagc-----ccaccggagccgtagcgaa 86555 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86556 agcgagtcttcttagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 86615 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 86616 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 86675 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86676 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 86735 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 86736 ccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttc 86795 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 349 ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 86796 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactag 86845 Score = 363 bits (183), Expect = 5e-97 Identities = 234/251 (93%) Strand = Plus / Minus Query: 377 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 436 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 437 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 496 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Query: 497 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 556 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 115126 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 115067 Query: 557 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 616 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 115066 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 115007 Query: 617 tgcatcggtag 627 | ||||||||| Sbjct: 115006 tacatcggtag 114996 Score = 363 bits (183), Expect = 5e-97 Identities = 234/251 (93%) Strand = Plus / Plus Query: 377 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 436 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 437 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 496 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993 Query: 497 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 556 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 86994 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 87053 Query: 557 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 616 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 87054 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 87113 Query: 617 tgcatcggtag 627 | ||||||||| Sbjct: 87114 tacatcggtag 87124
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 525 bits (265), Expect = e-146 Identities = 333/355 (93%), Gaps = 6/355 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||| |||||||||||| |||||| |||||||||| Sbjct: 4481 ccggcgacttataggcagtggcctggttaagggaatt-----caccggagccgtagcgaa 4535 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4536 agcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 4595 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 4596 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 4655 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4656 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 4715 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 4716 ccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttc 4775 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 354 ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 4776 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 4830 Score = 363 bits (183), Expect = 5e-97 Identities = 234/251 (93%) Strand = Plus / Plus Query: 377 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 436 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 437 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 496 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977 Query: 497 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 556 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 4978 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 5037 Query: 557 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 616 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 5038 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 5097 Query: 617 tgcatcggtag 627 | ||||||||| Sbjct: 5098 tacatcggtag 5108
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 525 bits (265), Expect = e-146 Identities = 333/355 (93%), Gaps = 6/355 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||| |||||||||||| |||||| |||||||||| Sbjct: 591 ccggcgacttataggcagtggcctggttaagggaatt-----caccggagccgtagcgaa 645 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 646 agcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 705 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 706 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 765 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 825 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 826 ccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttc 885 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 354 ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 886 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 940 Score = 363 bits (183), Expect = 5e-97 Identities = 234/251 (93%) Strand = Plus / Plus Query: 377 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 436 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 437 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 496 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 497 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 556 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 557 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 616 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 617 tgcatcggtag 627 | ||||||||| Sbjct: 1208 tacatcggtag 1218
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 525 bits (265), Expect = e-146 Identities = 333/355 (93%), Gaps = 6/355 (1%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||| |||||||||||| |||||| |||||||||| Sbjct: 150654 ccggcgacttataggcagtggcctggttaagggaatt-----caccggagccgtagcgaa 150600 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 150599 agcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 150540 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 150539 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 150480 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150479 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 150420 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 150419 ccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttc 150360 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 354 ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 150359 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 150305 Score = 525 bits (265), Expect = e-146 Identities = 333/355 (93%), Gaps = 6/355 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||| |||||||||||| |||||| |||||||||| Sbjct: 118012 ccggcgacttataggcagtggcctggttaagggaatt-----caccggagccgtagcgaa 118066 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 118067 agcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 118126 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 118127 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 118186 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118187 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 118246 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 118247 ccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttc 118306 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 354 ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 118307 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 118361 Score = 363 bits (183), Expect = 5e-97 Identities = 234/251 (93%) Strand = Plus / Minus Query: 377 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 436 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 437 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 496 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Query: 497 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 556 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 150157 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 150098 Query: 557 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 616 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 150097 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 150038 Query: 617 tgcatcggtag 627 | ||||||||| Sbjct: 150037 tacatcggtag 150027 Score = 363 bits (183), Expect = 5e-97 Identities = 234/251 (93%) Strand = Plus / Plus Query: 377 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 436 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 437 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 496 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508 Query: 497 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 556 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 118509 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 118568 Query: 557 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 616 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 118569 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 118628 Query: 617 tgcatcggtag 627 | ||||||||| Sbjct: 118629 tacatcggtag 118639
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 525 bits (265), Expect = e-146 Identities = 333/355 (93%), Gaps = 6/355 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||| |||||||||||| |||||| |||||||||| Sbjct: 591 ccggcgacttataggcagtggcctggttaagggaatt-----caccggagccgtagcgaa 645 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 646 agcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 705 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 706 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 765 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 825 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 826 ccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttc 885 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 354 ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 886 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 940 Score = 363 bits (183), Expect = 5e-97 Identities = 234/251 (93%) Strand = Plus / Plus Query: 377 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 436 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 437 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 496 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 497 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 556 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 557 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 616 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 617 tgcatcggtag 627 | ||||||||| Sbjct: 1208 tacatcggtag 1218
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 513 bits (259), Expect = e-142 Identities = 461/526 (87%), Gaps = 3/526 (0%) Strand = Plus / Plus Query: 88 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 147 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 148 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 207 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 208 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 267 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 268 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 327 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 328 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 385 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 386 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 445 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 446 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 505 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 506 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 565 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgt 1131 Query: 566 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1132 gccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 513 bits (259), Expect = e-142 Identities = 461/526 (87%), Gaps = 3/526 (0%) Strand = Plus / Plus Query: 88 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 147 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 148 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 207 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 208 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 267 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 268 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 327 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 328 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 385 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 386 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 445 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 446 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 505 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 506 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 565 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgt 1131 Query: 566 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1132 gccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 513 bits (259), Expect = e-142 Identities = 461/526 (87%), Gaps = 3/526 (0%) Strand = Plus / Plus Query: 88 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 147 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 148 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 207 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 208 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 267 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 268 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 327 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 328 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 385 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 386 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 445 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 446 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 505 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 506 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 565 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgt 1131 Query: 566 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1132 gccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 513 bits (259), Expect = e-142 Identities = 461/526 (87%), Gaps = 3/526 (0%) Strand = Plus / Plus Query: 88 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 147 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 148 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 207 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 208 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 267 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 268 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 327 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 328 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 385 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 386 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 445 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 446 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 505 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 506 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 565 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgt 1131 Query: 566 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1132 gccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 513 bits (259), Expect = e-142 Identities = 461/526 (87%), Gaps = 3/526 (0%) Strand = Plus / Plus Query: 88 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 147 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 652 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 711 Query: 148 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 207 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 771 Query: 208 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 267 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 772 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 831 Query: 268 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 327 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 328 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 385 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 386 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 445 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1010 Query: 446 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 505 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1011 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1070 Query: 506 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 565 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgt 1130 Query: 566 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1131 gccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1176
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 513 bits (259), Expect = e-142 Identities = 461/526 (87%), Gaps = 3/526 (0%) Strand = Plus / Plus Query: 88 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 147 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 148 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 207 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 208 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 267 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 268 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 327 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 328 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 385 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 386 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 445 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 446 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 505 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 506 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 565 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgt 1131 Query: 566 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1132 gccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 513 bits (259), Expect = e-142 Identities = 461/526 (87%), Gaps = 3/526 (0%) Strand = Plus / Plus Query: 88 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 147 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 148 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 207 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 208 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 267 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 268 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 327 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 328 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 385 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 386 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 445 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 446 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 505 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 506 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 565 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgt 1131 Query: 566 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1132 gccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 513 bits (259), Expect = e-142 Identities = 461/526 (87%), Gaps = 3/526 (0%) Strand = Plus / Plus Query: 88 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 147 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 148 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 207 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 208 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 267 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 268 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 327 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 328 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 385 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 386 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 445 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 446 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 505 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 506 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 565 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgt 1131 Query: 566 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1132 gccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 513 bits (259), Expect = e-142 Identities = 461/526 (87%), Gaps = 3/526 (0%) Strand = Plus / Plus Query: 88 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 147 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 148 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 207 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 208 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 267 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 268 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 327 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 328 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 385 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 386 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 445 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 446 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 505 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 506 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 565 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgt 1131 Query: 566 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1132 gccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 513 bits (259), Expect = e-142 Identities = 461/526 (87%), Gaps = 3/526 (0%) Strand = Plus / Plus Query: 88 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 147 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 148 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 207 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 208 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 267 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 268 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 327 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 328 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 385 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 386 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 445 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 446 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 505 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 506 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 565 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1072 tgcctagaaggagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgt 1131 Query: 566 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1132 gccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 511 bits (258), Expect = e-142 Identities = 304/320 (95%), Gaps = 5/320 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 119 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 173 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 174 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 233 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 234 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 293 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 294 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 353 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 354 ccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcg 413 Query: 301 gtgcgggctgcgcgagcggt 320 |||||||| ||| ||||||| Sbjct: 414 gtgcgggccgcgagagcggt 433
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 507 bits (256), Expect = e-140 Identities = 330/353 (93%), Gaps = 3/353 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||| |||||||||||| | | ||||||| || ||||||| Sbjct: 575 ccggcgacttataggcagtggcctggttaagggaaagaa--ccaccggagccatagcgaa 632 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 agcgagtcttcccagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 692 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 693 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 752 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 812 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 813 ccccgaaatgcgttgaggcgcaacagttgactggactatctaggggtaaagcactgtttc 872 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 352 ||||||||| ||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 873 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactggata 925 Score = 351 bits (177), Expect = 2e-93 Identities = 228/245 (93%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggag 1074 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1075 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctct 1134 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 622 ||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||| Sbjct: 1135 tgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatc 1194 Query: 623 ggtag 627 ||||| Sbjct: 1195 ggtag 1199
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 505 bits (255), Expect = e-140 Identities = 460/526 (87%), Gaps = 3/526 (0%) Strand = Plus / Plus Query: 88 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 147 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 148 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 207 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 208 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 267 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 268 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 327 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 328 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 385 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 386 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 445 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 446 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 505 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 506 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 565 |||||||||| |||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1072 tgcctagaagaggccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgt 1131 Query: 566 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1132 gccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 505 bits (255), Expect = e-140 Identities = 460/526 (87%), Gaps = 3/526 (0%) Strand = Plus / Plus Query: 88 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 147 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 652 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 711 Query: 148 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 207 ||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 712 aagtggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtg 771 Query: 208 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 267 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 772 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 831 Query: 268 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 327 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 328 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 385 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 386 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 445 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1010 Query: 446 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 505 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1011 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1070 Query: 506 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 565 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgt 1130 Query: 566 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1131 gccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1176
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 505 bits (255), Expect = e-140 Identities = 460/526 (87%), Gaps = 3/526 (0%) Strand = Plus / Plus Query: 88 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 147 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 148 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 207 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 208 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 267 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 268 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 327 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 328 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 385 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 386 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 445 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 446 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 505 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | | Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagct 1071 Query: 506 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 565 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgt 1131 Query: 566 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1132 gccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 505 bits (255), Expect = e-140 Identities = 461/526 (87%), Gaps = 4/526 (0%) Strand = Plus / Plus Query: 88 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 147 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 148 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 207 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 208 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 267 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gt 831 Query: 268 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 327 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 328 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 385 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 386 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 445 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1010 Query: 446 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 505 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1011 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1070 Query: 506 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 565 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgt 1130 Query: 566 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1131 gccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1176
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 505 bits (255), Expect = e-140 Identities = 460/526 (87%), Gaps = 3/526 (0%) Strand = Plus / Plus Query: 88 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 147 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 148 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 207 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 208 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 267 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| || || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgt 832 Query: 268 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 327 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 328 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 385 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 386 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 445 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 446 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 505 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 506 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 565 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgt 1131 Query: 566 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1132 gccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 492 bits (248), Expect = e-136 Identities = 291/306 (95%), Gaps = 5/306 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 115 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 169 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 229 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 230 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 289 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 290 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggctct 349 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 350 ccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcg 409 Query: 301 gtgcgg 306 |||||| Sbjct: 410 gtgcgg 415
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 490 bits (247), Expect = e-135 Identities = 458/526 (87%), Gaps = 3/526 (0%) Strand = Plus / Plus Query: 88 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 147 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 148 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 207 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 208 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 267 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 268 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 327 | | || ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 atccag-acctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 328 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 385 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 386 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 445 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 446 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 505 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 506 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 565 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgt 1131 Query: 566 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 || ||| ||||||||| || || ||| ||||||| ||||||||| Sbjct: 1132 gccgaatatgaacgggaataggcaatccaccgaagccgtgggatgt 1177
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 464 bits (234), Expect = e-127 Identities = 286/302 (94%), Gaps = 1/302 (0%) Strand = Plus / Plus Query: 51 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 110 |||||||||||||||||||| | |||| |||||||| |||||| |||||||||||||| Sbjct: 144559 ccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaacctgggt 144618 Query: 111 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 170 ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 144619 gatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactga 144678 Query: 171 tgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagct 230 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144679 tgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagct 144738 Query: 231 agctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaa 289 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 144739 agctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggtaaa 144798 Query: 290 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 349 |||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 144799 gcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactag 144858 Query: 350 at 351 || Sbjct: 144859 at 144860 Score = 464 bits (234), Expect = e-127 Identities = 286/302 (94%), Gaps = 1/302 (0%) Strand = Plus / Minus Query: 51 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 110 |||||||||||||||||||| | |||| |||||||| |||||| |||||||||||||| Sbjct: 88292 ccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaacctgggt 88233 Query: 111 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 170 ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 88232 gatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactga 88173 Query: 171 tgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagct 230 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88172 tgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagct 88113 Query: 231 agctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaa 289 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 88112 agctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggtaaa 88053 Query: 290 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 349 |||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 88052 gcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactag 87993 Query: 350 at 351 || Sbjct: 87992 at 87991 Score = 359 bits (181), Expect = 7e-96 Identities = 229/245 (93%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 145018 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 145019 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 145078 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 622 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 145079 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 145138 Query: 623 ggtag 627 ||||| Sbjct: 145139 ggtag 145143 Score = 359 bits (181), Expect = 7e-96 Identities = 229/245 (93%) Strand = Plus / Minus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 87833 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 87832 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 87773 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 622 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 87772 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 87713 Query: 623 ggtag 627 ||||| Sbjct: 87712 ggtag 87708
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 464 bits (234), Expect = e-127 Identities = 234/234 (100%) Strand = Plus / Minus Query: 394 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 454 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 514 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 574 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63709 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 63656
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 460 bits (232), Expect = e-126 Identities = 245/250 (98%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 75109 ccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaa 75050 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75049 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 74990 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74989 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 74930 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74929 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 74870 Query: 241 ccccgaaatg 250 |||||||||| Sbjct: 74869 ccccgaaatg 74860 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Plus Query: 491 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 550 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 401437 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 401496 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 413 gtcgagagggaaacagcccggatc 436 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 460 bits (232), Expect = e-126 Identities = 245/250 (98%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 382429 ccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaa 382488 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382489 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 382548 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382549 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 382608 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382609 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 382668 Query: 241 ccccgaaatg 250 |||||||||| Sbjct: 382669 ccccgaaatg 382678 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Minus Query: 491 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 550 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 282982 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 282923 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Minus Query: 491 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 550 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 154290 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 154231 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 413 gtcgagagggaaacagcccggatc 436 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 413 gtcgagagggaaacagcccggatc 436 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 460 bits (232), Expect = e-126 Identities = 245/250 (98%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 113200 ccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaa 113141 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113140 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 113081 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113080 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 113021 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113020 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 112961 Query: 241 ccccgaaatg 250 |||||||||| Sbjct: 112960 ccccgaaatg 112951 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Plus Query: 491 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 550 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 294071 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 294130 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 413 gtcgagagggaaacagcccggatc 436 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 460 bits (232), Expect = e-126 Identities = 248/254 (97%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 367882 ccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaa 367823 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367822 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 367763 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367762 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 367703 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367702 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 367643 Query: 241 ccccgaaatgcgtt 254 ||||||||| |||| Sbjct: 367642 ccccgaaattcgtt 367629 Score = 460 bits (232), Expect = e-126 Identities = 248/254 (97%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 184487 ccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaa 184428 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184427 agcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 184368 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184367 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 184308 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184307 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 184248 Query: 241 ccccgaaatgcgtt 254 ||||||||| |||| Sbjct: 184247 ccccgaaattcgtt 184234 Score = 48.1 bits (24), Expect = 0.035 Identities = 51/60 (85%) Strand = Plus / Plus Query: 491 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 550 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 266906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 266965 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 413 gtcgagagggaaacagcccggatc 436 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 454 bits (229), Expect = e-124 Identities = 229/229 (100%) Strand = Plus / Plus Query: 399 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 459 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 519 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 180 Query: 579 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 627 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 229
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 448 bits (226), Expect = e-122 Identities = 326/356 (91%), Gaps = 8/356 (2%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| |||||||||||||||||| || ||||||| ||||||||| Sbjct: 5956 ccggcgacttataggcagtggcttggttaagggcac-----ccaccggagccgtagcgag 5902 Query: 61 agcgagtcttaatagggcgattgtcactgctt-atggacccgaacctgggtgatctatcc 119 |||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5901 agcgagtcttcatagggcaattgtcactgctttatggacccgaacctgggtgatctatcc 5842 Query: 120 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 179 ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| | | Sbjct: 5841 atgaccaggatgaagct-ggatgaaactaagtagaggtccgaaccgactgatgttgcaaa 5783 Query: 180 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5782 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 5723 Query: 240 tccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgttt 298 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 5722 tccccgaaatgcgttgaggcgcagcagttgactggaccgtctaggggtaaagcactgttt 5663 Query: 299 cggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 354 |||| ||| | | |||||||| | ||||||||||||| ||||||||||||||| Sbjct: 5662 cggtataggccgtgtaagcggtacgacatcgaggcaaactatgaatactagatatg 5607 Score = 323 bits (163), Expect = 4e-85 Identities = 229/251 (91%) Strand = Plus / Minus Query: 377 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 436 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 437 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 496 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483 Query: 497 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 556 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 5482 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 5423 Query: 557 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 616 ||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 5422 cgctcttgcaccgaagatgaacgggactaagcgatctgccgaagctgtgggatatctaaa 5363 Query: 617 tgcatcggtag 627 ||||||||| Sbjct: 5362 aacatcggtag 5352
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 424 bits (214), Expect = e-115 Identities = 262/278 (94%) Strand = Plus / Minus Query: 350 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 409 ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| Sbjct: 640 atatgacccaaaaataacacgggtcaaggtcggccagtaagacattgggggaaaagcttc 581 Query: 410 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 469 ||| || || ||||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct: 580 atcatctcgaaagaaacagcccggatccccagctaaggcccttaaatgaccgctcaatga 521 Query: 470 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 529 |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 520 taaaggaggtgggggtgcaaagccagccatgaagtttgcctagaagcagccaccctttaa 461 Query: 530 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 401 Query: 590 atctgccgaagctgtgggatgtcaaaatgcatcggtag 627 |||||||||||||||||||||||||||||||||||||| Sbjct: 400 atctgccgaagctgtgggatgtcaaaatgcatcggtag 363
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 412 bits (208), Expect = e-112 Identities = 278/300 (92%), Gaps = 1/300 (0%) Strand = Plus / Plus Query: 51 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 110 |||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||| Sbjct: 753 ccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacccgggt 812 Query: 111 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 170 |||||| ||||| ||||| |||||||||| |||| | ||| |||||||||||||||||| Sbjct: 813 gatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccgactga 872 Query: 171 tgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagct 230 ||||||| |||||||||||||| ||||||||||||||||||||||||||||| | ||||| Sbjct: 873 tgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggagct 932 Query: 231 agctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaa 289 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 933 agctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggtaaa 992 Query: 290 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 349 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 993 gcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 1052 Score = 349 bits (176), Expect = 7e-93 Identities = 221/236 (93%) Strand = Plus / Plus Query: 377 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 436 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 437 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 496 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182 Query: 497 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 556 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1183 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1242 Query: 557 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 612 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1243 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtc 1298
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 412 bits (208), Expect = e-112 Identities = 278/300 (92%), Gaps = 1/300 (0%) Strand = Plus / Plus Query: 51 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 110 |||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||| Sbjct: 636 ccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacccgggt 695 Query: 111 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 170 |||||| ||||| ||||| |||||||||| |||| | ||| |||||||||||||||||| Sbjct: 696 gatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccgactga 755 Query: 171 tgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagct 230 ||||||| |||||||||||||| ||||||||||||||||||||||||||||| | ||||| Sbjct: 756 tgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggagct 815 Query: 231 agctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaa 289 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 816 agctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggtaaa 875 Query: 290 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 349 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 876 gcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 935 Score = 357 bits (180), Expect = 3e-95 Identities = 222/236 (94%) Strand = Plus / Plus Query: 377 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 436 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 437 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 496 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065 Query: 497 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 556 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1066 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1125 Query: 557 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 612 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1126 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtc 1181
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 412 bits (208), Expect = e-112 Identities = 278/300 (92%), Gaps = 1/300 (0%) Strand = Plus / Plus Query: 51 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 110 |||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||| Sbjct: 649 ccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacccgggt 708 Query: 111 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 170 |||||| ||||| ||||| |||||||||| |||| | ||| |||||||||||||||||| Sbjct: 709 gatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccgactga 768 Query: 171 tgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagct 230 ||||||| |||||||||||||| ||||||||||||||||||||||||||||| | ||||| Sbjct: 769 tgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggagct 828 Query: 231 agctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaa 289 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 829 agctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggtaaa 888 Query: 290 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 349 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 889 gcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 948 Score = 357 bits (180), Expect = 3e-95 Identities = 222/236 (94%) Strand = Plus / Plus Query: 377 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 436 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 437 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 496 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078 Query: 497 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 556 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1079 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1138 Query: 557 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 612 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1139 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtc 1194
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 410 bits (207), Expect = e-111 Identities = 244/257 (94%), Gaps = 5/257 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| Sbjct: 564 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 618 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 619 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 678 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 679 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 738 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 798 Query: 241 ccccgaaatgcgttgag 257 ||||||||||||||||| Sbjct: 799 ccccgaaatgcgttgag 815
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 406 bits (205), Expect = e-110 Identities = 319/355 (89%), Gaps = 7/355 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||| |||||||||||| |||||| || ||||||| Sbjct: 593 ccggcgacttataggcagtggcatggttaagggaat-----ccaccgaagccatagcgaa 647 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 ||| |||||| |||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 648 agcaagtctttc-agggcgattgtcactgtttatggacccgaacccgggtgatctatcca 706 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||| || Sbjct: 707 tgaccaggatgaagcttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaa 766 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 767 tcagcggatgagttgtggttaggggtgaaatgccactcgaactcggagctagctggttct 826 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||||| ||| | ||| | || |||||||||||||||||||| Sbjct: 827 ccccgaaatgcgttgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttc 886 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 354 ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 887 ggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatactaaatatg 941 Score = 242 bits (122), Expect = 1e-60 Identities = 203/230 (88%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgt 1180
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 406 bits (205), Expect = e-110 Identities = 319/355 (89%), Gaps = 7/355 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||| |||||||||||| |||||| || ||||||| Sbjct: 3627 ccggcgacttataggcagtggcatggttaagggaat-----ccaccgaagccatagcgaa 3681 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 ||| |||||| |||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 3682 agcaagtctttc-agggcgattgtcactgtttatggacccgaacccgggtgatctatcca 3740 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||| || Sbjct: 3741 tgaccaggatgaagcttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaa 3800 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 3801 tcagcggatgagttgtggttaggggtgaaatgccactcgaactcggagctagctggttct 3860 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||||| ||| | ||| | || |||||||||||||||||||| Sbjct: 3861 ccccgaaatgcgttgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttc 3920 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 354 ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 3921 ggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatactaaatatg 3975 Score = 250 bits (126), Expect = 5e-63 Identities = 204/230 (88%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 4104 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 4105 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 4164 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 |||||| ||||||||||||| ||||||||| ||||||| ||||||||||| Sbjct: 4165 ttgcgccgaagatgaacgggactaagcgatttgccgaaactgtgggatgt 4214
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 398 bits (201), Expect = e-108 Identities = 319/356 (89%), Gaps = 6/356 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||||||| |||||| |||||||||| ||||| ||||| || ||||||| Sbjct: 608 ccggcgactcataagtagtggcctggttaaggg----gaacc-accggagccatagcgaa 662 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 ||| |||||| ||||||| | ||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 663 agcaagtcttcatagggcaaatgtcattgcttatgtacccgaacttgggtgatctaacca 722 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 723 tgaccaggatgaaatttggttgaaactaagtggaggtccgaaccgactgatgttgaagaa 782 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 783 tcagcggatgagttgtggttaggggtgaaatgccaatcgaacccaaagctagctggttct 842 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 300 |||||||||||||| ||| ||||||||| || |||||||||||||||||||||||||||| Sbjct: 843 ccccgaaatgcgtttaggggcagcagtt-accggacatctaggggtaaagcactgtttcg 901 Query: 301 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac 356 ||||||| || |||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 902 gtgcgggtctcgagagcggtaccaaattgaggcaaactatgaatactagatatgac 957 Score = 331 bits (167), Expect = 2e-87 Identities = 215/231 (93%) Strand = Plus / Plus Query: 381 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 440 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 441 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 500 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccagg 1119 Query: 501 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 560 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1120 aggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgct 1179 Query: 561 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 ||||||| ||| ||||||||| ||||||||| |||||||||||||||||| Sbjct: 1180 cttgcgccgaatatgaacgggaataagcgatccgccgaagctgtgggatgt 1230
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 398 bits (201), Expect = e-108 Identities = 318/355 (89%), Gaps = 7/355 (1%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||| |||||||||||| |||||| || ||||||| Sbjct: 593 ccggcgacttataggcagtggcatggttaagggaat-----ccaccgaagccatagcgaa 647 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 ||| |||||| |||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 648 agcaagtctttc-agggcgattgtcactgtttatggacccgaacccgggtgatctatcca 706 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 ||||||||||||||||||| | |||| ||| ||||||||||||||||||||||||| || Sbjct: 707 tgaccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactgatgttgaaaaa 766 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 767 tcagcggatgagttgtggttaggggtgaaatgccactcgaactcggagctagctggttct 826 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||||| ||| | ||| | || |||||||||||||||||||| Sbjct: 827 ccccgaaatgcgttgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttc 886 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 354 ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 887 ggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatactaaatatg 941 Score = 242 bits (122), Expect = 1e-60 Identities = 203/230 (88%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgt 1180
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 396 bits (200), Expect = e-107 Identities = 314/350 (89%), Gaps = 7/350 (2%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||| |||||||||||| |||||| |||||||||| Sbjct: 593 ccggcgacttataggcagtggcgtggttaagggaatt-----caccggagccgtagcgaa 647 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 ||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 648 agcgagtct-aacagggcgattgtcactgcttatggacccgaacccgggtgatctatcca 706 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 || |||||||||||||||| |||||| ||| ||||||||||||||||||||||||| || Sbjct: 707 tggccaggatgaagcttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaa 766 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||| ||||||||| |||||||| ||| |||||| | ||||||||||||||| Sbjct: 767 tcagcggatgagctgtggttagcggtgaaataccaatcgaactcggagctagctggttct 826 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||||| ||| | ||| | ||||||||||||||||||||| Sbjct: 827 ccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttc 886 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 349 ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 887 ggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 936 Score = 347 bits (175), Expect = 3e-92 Identities = 220/235 (93%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 1072 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1132 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 616 |||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 1133 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaa 1187
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 394 bits (199), Expect = e-106 Identities = 220/227 (96%) Strand = Plus / Plus Query: 401 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 461 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 520 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 521 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 580 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 436 Query: 581 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 627 |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 437 ggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtag 483
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 381 bits (192), Expect = e-102 Identities = 312/350 (89%), Gaps = 7/350 (2%) Strand = Plus / Minus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||| |||||||||||| |||||| |||||||||| Sbjct: 124672 ccggcgacttataggcagtggcgtggttaagggaatt-----caccggagccgtagcgaa 124618 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 ||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 124617 agcgagtct-aacagggcgattgtcactgcttatggacccgaacccgggtgatctatcca 124559 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 || |||||||||||||||| |||| | ||| ||||||||||||||||||||||||| || Sbjct: 124558 tggccaggatgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaa 124499 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||| ||||||||| |||||||| ||| |||||| | ||||||||||||||| Sbjct: 124498 tcagcggatgagctgtggttagcggtgaaataccaatcgaactcggagctagctggttct 124439 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||||| ||| | ||| | ||||||||||||||||||||| Sbjct: 124438 ccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttc 124379 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 349 ||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 124378 ggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctgaatactag 124329 Score = 381 bits (192), Expect = e-102 Identities = 312/350 (89%), Gaps = 7/350 (2%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 ||||||||| |||| ||||||| |||||||||||| |||||| |||||||||| Sbjct: 95194 ccggcgacttataggcagtggcgtggttaagggaatt-----caccggagccgtagcgaa 95248 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 ||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95249 agcgagtct-aacagggcgattgtcactgcttatggacccgaacccgggtgatctatcca 95307 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 || |||||||||||||||| |||| | ||| ||||||||||||||||||||||||| || Sbjct: 95308 tggccaggatgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaa 95367 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 |||||||||||| ||||||||| |||||||| ||| |||||| | ||||||||||||||| Sbjct: 95368 tcagcggatgagctgtggttagcggtgaaataccaatcgaactcggagctagctggttct 95427 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 |||||||||||||||||||||||| ||| | ||| | ||||||||||||||||||||| Sbjct: 95428 ccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttc 95487 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 349 ||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 95488 ggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctgaatactag 95537 Score = 341 bits (172), Expect = 2e-90 Identities = 217/232 (93%) Strand = Plus / Minus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 124193 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 124192 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 124133 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 613 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 124132 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtca 124081 Score = 341 bits (172), Expect = 2e-90 Identities = 217/232 (93%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 95673 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 95674 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 95733 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 613 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 95734 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtca 95785
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 369 bits (186), Expect = 7e-99 Identities = 309/348 (88%), Gaps = 2/348 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| | || ||||| || ||||||| Sbjct: 4637 ccggcgactcataggcagtggcttggttaagggaaattatcc-accggagccatagcgaa 4695 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 ||| |||||| |||||| |||||||||| |||||||||||||| |||||||||| ||| Sbjct: 4696 agcaagtctttttagggctattgtcactgtctatggacccgaacccgggtgatctaacca 4755 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 || |||||||||||||||| | |||||||| ||||||| ||||||| ||||||||| || Sbjct: 4756 tggccaggatgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaa 4815 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 || ||||||||| ||||||||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4816 tcggcggatgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttct 4875 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 ||||||||||||||||||||||||| || |||| || ||| ||||||||||||||||||| Sbjct: 4876 ccccgaaatgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttc 4935 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 347 |||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 4936 ggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatact 4983 Score = 291 bits (147), Expect = 1e-75 Identities = 207/227 (91%) Strand = Plus / Plus Query: 385 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 444 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 445 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 504 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 5124 Query: 505 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 564 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 5125 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 5184 Query: 565 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 ||| ||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 5185 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgt 5231
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 369 bits (186), Expect = 7e-99 Identities = 309/348 (88%), Gaps = 2/348 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| | || ||||| || ||||||| Sbjct: 604 ccggcgactcataggcagtggcttggttaagggaaattatcc-accggagccatagcgaa 662 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 ||| |||||| |||||| |||||||||| |||||||||||||| |||||||||| ||| Sbjct: 663 agcaagtctttttagggctattgtcactgtctatggacccgaacccgggtgatctaacca 722 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 || |||||||||||||||| | |||||||| ||||||| ||||||| ||||||||| || Sbjct: 723 tggccaggatgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaa 782 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 || ||||||||| ||||||||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 783 tcggcggatgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttct 842 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 ||||||||||||||||||||||||| || |||| || ||| ||||||||||||||||||| Sbjct: 843 ccccgaaatgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttc 902 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 347 |||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 903 ggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatact 950 Score = 291 bits (147), Expect = 1e-75 Identities = 207/227 (91%) Strand = Plus / Plus Query: 385 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 444 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 445 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 504 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 1091 Query: 505 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 564 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 565 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 ||| ||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgt 1198
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 369 bits (186), Expect = 7e-99 Identities = 309/348 (88%), Gaps = 2/348 (0%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagggaacggaacccaccggnaccgtagcgaa 60 |||||||||||||| |||||||||||||||||||| | || ||||| || ||||||| Sbjct: 604 ccggcgactcataggcagtggcttggttaagggaaattatcc-accggagccatagcgaa 662 Query: 61 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 120 ||| |||||| |||||| |||||||||| |||||||||||||| |||||||||| ||| Sbjct: 663 agcaagtctttttagggctattgtcactgtctatggacccgaacccgggtgatctaacca 722 Query: 121 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 180 || |||||||||||||||| | |||||||| ||||||| ||||||| ||||||||| || Sbjct: 723 tggccaggatgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaa 782 Query: 181 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 240 || ||||||||| ||||||||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 783 tcggcggatgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttct 842 Query: 241 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 299 ||||||||||||||||||||||||| || |||| || ||| ||||||||||||||||||| Sbjct: 843 ccccgaaatgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttc 902 Query: 300 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 347 |||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 903 ggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatact 950 Score = 283 bits (143), Expect = 3e-73 Identities = 206/227 (90%) Strand = Plus / Plus Query: 385 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 444 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 445 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 504 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggt 1091 Query: 505 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 564 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 565 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 ||| ||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgt 1198
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 359 bits (181), Expect = 7e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 347 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 406 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 407 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 466 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 467 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 526 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 19153009 Query: 527 taaagagtgcgtaatagctca 547 |||||||||||| ||| |||| Sbjct: 19153010 taaagagtgcgttatatctca 19153030
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 359 bits (181), Expect = 7e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 347 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 406 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 407 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 466 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 467 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 526 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 76404 Query: 527 taaagagtgcgtaatagctca 547 |||||||||||| ||| |||| Sbjct: 76405 taaagagtgcgttatatctca 76425
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 357 bits (180), Expect = 3e-95 Identities = 271/300 (90%), Gaps = 1/300 (0%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||| |||||| ||||| |||||||||| |||||||||||||| ||||||| Sbjct: 651 tagcgaaagcaagtcttttcagggctattgtcactgtctatggacccgaacccgggtgat 710 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||||| |||||||||| ||||||| ||||||| ||||| Sbjct: 711 ctaaccatggccaggatgaagcttgggtgaaactaagtggaggtcccaaccgaccgatgt 770 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| |||| ||||||||| ||||||||| ||||||||||||||||||| | |||||||| Sbjct: 771 tgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcggagctagc 830 Query: 234 tggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagca 292 |||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||| Sbjct: 831 tggttctccccgaaatgcgttgaggcgcagcaattaactggactatccaggggtaaagca 890 Query: 293 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 352 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||| Sbjct: 891 ctgtttcggtgcgggctgcgaaagcggtaccaaatcgagacaaactctgaatactggata 950 Score = 291 bits (147), Expect = 1e-75 Identities = 219/243 (90%) Strand = Plus / Plus Query: 385 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 444 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 445 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 504 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| |||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggt 1086 Query: 505 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 564 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || | Sbjct: 1087 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcg 1146 Query: 565 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 624 ||| ||||||||| ||| ||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1147 cgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatcgg 1206 Query: 625 tag 627 ||| Sbjct: 1207 tag 1209
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 355 bits (179), Expect = 1e-94 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 403 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 462 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 463 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 522 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 523 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 168126 Query: 583 ctaagcgatctgccgaagctgtgggatgtcaaaat 617 |||||||||||||| |||||||||||||||||||| Sbjct: 168127 ctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 355 bits (179), Expect = 1e-94 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 403 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 462 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 463 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 522 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 523 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 2530 Query: 583 ctaagcgatctgccgaagctgtgggatgtcaaaat 617 |||||||||||||| |||||||||||||||||||| Sbjct: 2531 ctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 349 bits (176), Expect = 7e-93 Identities = 270/299 (90%), Gaps = 3/299 (1%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||| Sbjct: 639 tagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacccgaacccgggtgat 697 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||| | ||||||| || || |||||||||||| ||||| Sbjct: 698 ctaaccatggccaggatgaagctttggtgaaactcagtggaagtccgaaccgaccgatgt 757 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| |||| |||||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 758 tgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagc 817 Query: 234 tggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatctaggggtaaagc 291 ||||||||||||||||||||||||||||||| |||| | || |||||||||||||| Sbjct: 818 tggttctccccgaaatgcgttgaggcgcagcggttggatagggctttctaggggtaaagc 877 Query: 292 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 350 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 878 actgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 936 Score = 274 bits (138), Expect = 3e-70 Identities = 207/230 (90%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 1071 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1072 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 1131 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 612 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 1132 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtc 1181
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 349 bits (176), Expect = 7e-93 Identities = 270/299 (90%), Gaps = 3/299 (1%) Strand = Plus / Minus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||| Sbjct: 115023 tagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacccgaacccgggtgat 114965 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||| | ||||||| || || |||||||||||| ||||| Sbjct: 114964 ctaaccatggccaggatgaagctttggtgaaactcagtggaagtccgaaccgaccgatgt 114905 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| |||| |||||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 114904 tgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagc 114845 Query: 234 tggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatctaggggtaaagc 291 ||||||||||||||||||||||||||||||| |||| | || |||||||||||||| Sbjct: 114844 tggttctccccgaaatgcgttgaggcgcagcggttggatagggctttctaggggtaaagc 114785 Query: 292 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 350 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 114784 actgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 114726 Score = 349 bits (176), Expect = 7e-93 Identities = 270/299 (90%), Gaps = 3/299 (1%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||| Sbjct: 86965 tagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacccgaacccgggtgat 87023 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||| | ||||||| || || |||||||||||| ||||| Sbjct: 87024 ctaaccatggccaggatgaagctttggtgaaactcagtggaagtccgaaccgaccgatgt 87083 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| |||| |||||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 87084 tgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagc 87143 Query: 234 tggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatctaggggtaaagc 291 ||||||||||||||||||||||||||||||| |||| | || |||||||||||||| Sbjct: 87144 tggttctccccgaaatgcgttgaggcgcagcggttggatagggctttctaggggtaaagc 87203 Query: 292 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 350 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 87204 actgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 87262 Score = 274 bits (138), Expect = 3e-70 Identities = 207/230 (90%) Strand = Plus / Minus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 114591 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 114590 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 114531 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 612 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 114530 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtc 114481 Score = 274 bits (138), Expect = 3e-70 Identities = 207/230 (90%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 87397 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 87398 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 87457 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 612 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 87458 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtc 87507
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 345 bits (174), Expect = 1e-91 Identities = 274/306 (89%), Gaps = 1/306 (0%) Strand = Plus / Plus Query: 51 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 110 |||||||||||||||||| | |||||| |||||||| ||||||||||||||| |||| Sbjct: 1040 ccgtagcgaaagcgagtcattcaagggcgcatgtcactgtttatggacccgaacccgggt 1099 Query: 111 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 170 |||||||||||| ||||| |||||||||| |||| | ||| |||| |||||||||||| Sbjct: 1100 gatctatccatggccagggtgaagcttgggtgaagccaagtggaggcccgaaccgactgg 1159 Query: 171 tgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagct 230 ||||||| || ||||||||||| ||||||||||||||||||||||||||||| | ||||| Sbjct: 1160 tgttgaaaaaccagcggatgagctgtggttaggggtgaaatgccactcgaactcggagct 1219 Query: 231 agctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaa 289 |||||||||||||||||||||||||||||||||| |||||| || | |||||||||| Sbjct: 1220 agctggttctccccgaaatgcgttgaggcgcagcgattgactaaactgtttaggggtaaa 1279 Query: 290 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 349 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1280 gcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 1339 Query: 350 atatga 355 | |||| Sbjct: 1340 acatga 1345 Score = 313 bits (158), Expect = 4e-82 Identities = 206/222 (92%) Strand = Plus / Plus Query: 384 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 443 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 444 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 503 ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggagg 1477 Query: 504 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 563 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1478 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1537 Query: 564 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 605 |||| ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1538 gcgccgaaaatgaacgggactaagcggtctgccgaagctgtg 1579
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 345 bits (174), Expect = 1e-91 Identities = 250/274 (91%), Gaps = 1/274 (0%) Strand = Plus / Plus Query: 82 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 141 |||||||| |||| |||||||||| |||||||||||||||| ||||| |||| ||||| | Sbjct: 623 tgtcactgtttatagacccgaacccgggtgatctatccatggccagggtgaaacttgggt 682 Query: 142 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 201 ||| | ||| ||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 683 gaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggtta 742 Query: 202 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 261 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 743 ggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgc 802 Query: 262 agcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 320 ||| |||| ||||| | ||||||||||||||||||||||||||||||||| |||||| Sbjct: 803 agcgattgattggactacttaggggtaaagcactgtttcggtgcgggctgcgaaagcggt 862 Query: 321 accaaatcgaggcaaactctgaatactagatatg 354 ||||||||||||||||||||||||||||| |||| Sbjct: 863 accaaatcgaggcaaactctgaatactaggtatg 896 Score = 343 bits (173), Expect = 4e-91 Identities = 215/229 (93%) Strand = Plus / Plus Query: 384 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 443 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 444 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 503 |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggagg 1031 Query: 504 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 563 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1032 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1091 Query: 564 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 612 |||| ||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 1092 gcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtc 1140
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 333 bits (168), Expect = 4e-88 Identities = 192/200 (96%) Strand = Plus / Minus Query: 410 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 469 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 470 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 529 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 530 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 589 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 115295 Query: 590 atctgccgaagctgtgggat 609 |||||||||||||||||||| Sbjct: 115294 atctgccgaagctgtgggat 115275
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 333 bits (168), Expect = 4e-88 Identities = 270/301 (89%), Gaps = 6/301 (1%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtga 112 ||||||||||||||| |||||||| || |||||| ||||||||||||||| |||||| Sbjct: 642 agcgaaagcgagtctgaatagggcacttttgtcactttttatggacccgaacccgggtga 701 Query: 113 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 172 |||| |||||||||||||||||||||| | |||| ||| ||||||||||||||| |||| Sbjct: 702 tctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatg 761 Query: 173 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 232 ||||| |||| |||||||||||||||||||||||||||||||| |||||| | ||||||| Sbjct: 762 ttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctag 821 Query: 233 ctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-atctaggggtaa 288 |||||||||||||||||||||||||||||||| |||||| ||| | |||||||||||| Sbjct: 822 ctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctatctaggggtaa 881 Query: 289 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 348 |||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 882 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatacta 941 Query: 349 g 349 | Sbjct: 942 g 942 Score = 268 bits (135), Expect = 2e-68 Identities = 201/223 (90%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||||||||| ||||| |||||||||||||||| | ||| | ||| ||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggag 1079 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 1080 gtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttct 1139 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 605 ||||| ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1140 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182 Score = 42.1 bits (21), Expect = 2.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagg 32 ||||||||| |||| |||||||||||||||| Sbjct: 592 ccggcgacttatagaaagtggcttggttaagg 623
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 329 bits (166), Expect = 6e-87 Identities = 269/300 (89%), Gaps = 5/300 (1%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtga 112 ||||||||| |||||||||||||||||| |||||| ||||||||||||||| |||||| Sbjct: 706 agcgaaagcaagtcttaatagggcgattttgtcactttttatggacccgaacccgggtga 765 Query: 113 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 172 |||| |||||||||||||||||||||| | |||| ||| || |||||||||||| |||| Sbjct: 766 tctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagtccgaaccgaccgatg 825 Query: 173 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 232 ||||| |||| |||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 826 ttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaacccggagctag 885 Query: 233 ctggttctccccgaaatgcgttgaggcgcagcagttga--ctg-gacatctaggggtaaa 289 |||||||||||||||||||||||||||||||| ||||| || | |||||||||||| Sbjct: 886 ctggttctccccgaaatgcgttgaggcgcagcggttgatgttgagctgtctaggggtaaa 945 Query: 290 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 349 ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||| Sbjct: 946 gcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatactag 1005 Score = 224 bits (113), Expect = 3e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 |||||||||| |||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1142 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1143 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1202 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 607 ||||| ||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1203 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtggg 1247
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 323 bits (163), Expect = 4e-85 Identities = 269/303 (88%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||| |||| || | ||||| |||||||| ||||||||||||||| ||||||| Sbjct: 602 tagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaacccgggtgat 661 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||||||||| ||||||||||| |||| |||||| || ||||||||||||||||| ||| Sbjct: 662 ctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaaccgactggtgt 721 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| || || |||||||| ||||| ||||||||||||||||||||||| | |||||||| Sbjct: 722 tgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaactcggagctagc 781 Query: 234 tggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagca 292 ||||||||||||||||||||||||||||||| ||||||| ||| || ||||||||||||| Sbjct: 782 tggttctccccgaaatgcgttgaggcgcagcggttgactagactatttaggggtaaagca 841 Query: 293 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 352 |||||||||||||||||| | | ||||||||||| || ||||||||||||||||| ||| Sbjct: 842 ctgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctgaatactaaata 901 Query: 353 tga 355 ||| Sbjct: 902 tga 904 Score = 321 bits (162), Expect = 2e-84 Identities = 213/230 (92%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccagga 1034 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | Sbjct: 1035 ggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1094 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 |||||| ||||||||| ||| ||||||| ||||||||||||||| ||||| Sbjct: 1095 ttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgagatgt 1144
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 317 bits (160), Expect = 2e-83 Identities = 277/315 (87%), Gaps = 1/315 (0%) Strand = Plus / Plus Query: 42 ccaccggnaccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 101 ||||||| || |||||||||| |||||| |||||| | ||||| ||||| |||||||| Sbjct: 619 ccaccggagccatagcgaaagcaagtcttcatagggaaaatgtcattgcttgtggacccg 678 Query: 102 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 161 ||| ||||||||||| |||||||||||||| | |||| | |||||||| | |||| || Sbjct: 679 aacttgggtgatctaaccatgaccaggatgcaatttggttaaaactaagtgggggtctga 738 Query: 162 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 739 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccaatcgaa 798 Query: 222 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 281 |||| ||||||||||||| ||||||||||| || ||||||||||||| || || |||||| Sbjct: 799 cccaaagctagctggttcgccccgaaatgcatttaggcgcagcagtt-accgggcatcta 857 Query: 282 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 341 ||||||||||| ||||| |||||||| || |||||||||||||| |||||| ||| || Sbjct: 858 ggggtaaagcattgttttggtgcgggtcacgagagcggtaccaaattgaggcagactatg 917 Query: 342 aatactagatatgac 356 ||||||||||||||| Sbjct: 918 aatactagatatgac 932 Score = 192 bits (97), Expect = 1e-45 Identities = 170/193 (88%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 359 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 418 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 419 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 478 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 479 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 538 | ||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 1064 t-agggtgcatagacatccaggaggtttgcctagaagaagccaccctttaaagcgtgcat 1122 Query: 539 aatagctcactga 551 ||||||| ||||| Sbjct: 1123 aatagctaactga 1135
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 313 bits (158), Expect = 4e-82 Identities = 158/158 (100%) Strand = Plus / Plus Query: 470 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 530 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 590 atctgccgaagctgtgggatgtcaaaatgcatcggtag 627 |||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtag 158
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 2e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 153 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 212 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 213 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 272 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 273 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 332 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 333 caaactctgaatactagatat 353 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 307 bits (155), Expect = 2e-80 Identities = 265/299 (88%), Gaps = 2/299 (0%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||| |||||||||||||| |||||| ||||||||||||||| |||||||| Sbjct: 790 agcgaaagcaagtcttaatagggctcaggtcactctttatggacccgaacccgggtgatc 849 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || |||||||||||||||||||| | | |||| || || |||||||||||| |||||| Sbjct: 850 taaccatgaccaggatgaagcttcggtaaaacggagtggaagtccgaaccgaccgatgtt 909 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| |||| |||||||||||||||||||||||||||||||| |||||| | ||||||||| Sbjct: 910 gaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagct 969 Query: 235 ggttctccccgaaatgcgttgaggcgcagcagttgac-tggac-atctaggggtaaagca 292 |||||||||||||||||||||||||||||| ||| || ||| | ||||||||||||||| Sbjct: 970 ggttctccccgaaatgcgttgaggcgcagcggttaacgtgggcggtctaggggtaaagca 1029 Query: 293 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 351 |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||| Sbjct: 1030 ctgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatactagat 1088 Score = 268 bits (135), Expect = 2e-68 Identities = 204/227 (89%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 |||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| ||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggag 1222 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| || Sbjct: 1223 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttct 1282 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1283 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 80 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 139 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 140 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 199 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 200 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 259 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 260 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 316 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 317 cggtaccaaatcgaggcaaactctgaatactaga 350 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 248 bits (125), Expect = 2e-62 Identities = 200/225 (88%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| || Sbjct: 1150 taaggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaag 1209 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1210 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttct 1269 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 607 ||||| ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1270 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 301 bits (152), Expect = 1e-78 Identities = 172/179 (96%) Strand = Plus / Plus Query: 37 ggaacccaccggnaccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 96 |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 97 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 156 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 157 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 215 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 96 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 155 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 156 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 215 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 216 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 274 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 275 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 333 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 334 aaactctgaatactagatatgac 356 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 385 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 444 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 445 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 504 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 6706 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 6765 Query: 505 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 550 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 6766 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 6811 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 51 ccgtagcgaaagcgagtcttaatagggcgat 81 ||||||| ||||||||||| ||||||||||| Sbjct: 6306 ccgtagcaaaagcgagtctgaatagggcgat 6336
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 96 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 155 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 156 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 215 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 216 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 274 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 275 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 333 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 334 aaactctgaatactagatatgac 356 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 385 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 444 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 445 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 504 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 3769 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 3828 Query: 505 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 550 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 3829 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 3874 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 51 ccgtagcgaaagcgagtcttaatagggcgat 81 ||||||| ||||||||||| ||||||||||| Sbjct: 3369 ccgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 96 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 155 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 156 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 215 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 216 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 274 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 275 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 333 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 334 aaactctgaatactagatatgac 356 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 385 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 444 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 445 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 504 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 1057 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 1116 Query: 505 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 550 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 1117 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 1162 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 51 ccgtagcgaaagcgagtcttaatagggcgat 81 ||||||| ||||||||||| ||||||||||| Sbjct: 657 ccgtagcaaaagcgagtctgaatagggcgat 687
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 291 bits (147), Expect = 1e-75 Identities = 207/227 (91%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||||||||||||||| |||| ||||||||||| | ||| | ||| ||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggag 1085 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1086 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1145 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1146 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 83 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 142 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 143 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 202 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 203 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 262 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 263 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 319 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 320 taccaaatcgaggcaaactctgaatactaga 350 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 287 bits (145), Expect = 2e-74 Identities = 261/297 (87%), Gaps = 2/297 (0%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaacctgggtga 112 |||||||||||||| ||||||| ||| || |||||| |||| |||||||||| |||||| Sbjct: 2456 tagcgaaagcgagttttaatagagcgtttagtcactatttatagacccgaacccgggtga 2515 Query: 113 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 172 |||| ||||| ||||| |||||||| | | ||||||| |||| ||||||||| |||| Sbjct: 2516 tctaaccatggccagggtgaagcttaggtaaaactaaatggaggcccgaaccgatcgatg 2575 Query: 173 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 232 ||||| |||| ||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 2576 ttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatcgaacccggagctag 2635 Query: 233 ctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatctaggggtaaagc 291 |||||||||||||||||||||||||||||||| ||||| | || |||||||||||| Sbjct: 2636 ctggttctccccgaaatgcgttgaggcgcagcggttgatgttataatttaggggtaaagc 2695 Query: 292 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 348 |||||||||||||||||| || ||| ||||||||||||||||||||||||||||||| Sbjct: 2696 actgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaactctgaatacta 2752 Score = 184 bits (93), Expect = 2e-43 Identities = 186/217 (85%) Strand = Plus / Plus Query: 395 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 454 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 455 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 514 || | ||| |||| ||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtggaagtgcttagacaaccaggaggtttgcttagaa 2897 Query: 515 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 574 ||||| | |||||||||||||||||||||||||||| || ||||| ||||| ||| || Sbjct: 2898 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgcttctgcgccgaaaat 2957 Query: 575 gaacggggctaagcgatctgccgaagctgtgggatgt 611 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 2958 gaatgggactaagctatttgccgaagctgtgggatgt 2994
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 287 bits (145), Expect = 2e-74 Identities = 261/297 (87%), Gaps = 2/297 (0%) Strand = Plus / Minus Query: 54 tagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgggtga 112 |||||||||||||| | |||| ||| |||||||| |||| |||||||||| |||||| Sbjct: 114792 tagcgaaagcgagtttgtatagagcgttttgtcactatttatagacccgaacccgggtga 114733 Query: 113 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 172 |||| ||||| ||||| |||||||||| | |||||||| |||| |||||| || | ||| Sbjct: 114732 tctaaccatggccagggtgaagcttgggtaaaactaagtggaggcccgaactgattaatg 114673 Query: 173 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 232 ||||| ||| | ||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 114672 ttgaaaaattaccggatgagttgtggttaggggtgaaatgccaatcgaacccggagctag 114613 Query: 233 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagc 291 |||||||||||||||||| ||||||||||||| ||||| | | | |||||||||||| Sbjct: 114612 ctggttctccccgaaatgtgttgaggcgcagcggttgagattataacttaggggtaaagc 114553 Query: 292 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 348 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 114552 actgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 114496 Score = 287 bits (145), Expect = 2e-74 Identities = 261/297 (87%), Gaps = 2/297 (0%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgggtga 112 |||||||||||||| | |||| ||| |||||||| |||| |||||||||| |||||| Sbjct: 2725 tagcgaaagcgagtttgtatagagcgttttgtcactatttatagacccgaacccgggtga 2784 Query: 113 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 172 |||| ||||| ||||| |||||||||| | |||||||| |||| |||||| || | ||| Sbjct: 2785 tctaaccatggccagggtgaagcttgggtaaaactaagtggaggcccgaactgattaatg 2844 Query: 173 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 232 ||||| ||| | ||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 2845 ttgaaaaattaccggatgagttgtggttaggggtgaaatgccaatcgaacccggagctag 2904 Query: 233 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagc 291 |||||||||||||||||| ||||||||||||| ||||| | | | |||||||||||| Sbjct: 2905 ctggttctccccgaaatgtgttgaggcgcagcggttgagattataacttaggggtaaagc 2964 Query: 292 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 348 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2965 actgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 3021 Score = 202 bits (102), Expect = 1e-48 Identities = 198/230 (86%) Strand = Plus / Minus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 114423 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 114364 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 114363 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 114304 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 114303 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 114254 Score = 202 bits (102), Expect = 1e-48 Identities = 198/230 (86%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 3094 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 3153 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 3154 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 3213 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 3214 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 3263
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 283 bits (143), Expect = 3e-73 Identities = 260/297 (87%), Gaps = 4/297 (1%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 113 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 234 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 290 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 291 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 347 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 180 bits (91), Expect = 4e-42 Identities = 193/227 (85%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 |||||||||||||| | || |||| |||||||||| | ||| ||||| |||| || Sbjct: 995 taaggcccctaaataatttctaagtgggaaaggaggtgagaatgctgagacaaccagaag 1054 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct: 1055 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggttaagcgtttt 1114 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 ||||| ||| ||| |||| ||||| || ||||||||||||||||| Sbjct: 1115 tgcgccgaaaatgctcgggactaagaaatttgccgaagctgtgggat 1161
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 58 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 117 |||| ||||||| |||||||||| ||||| |||| |||||||||| |||||||||| Sbjct: 262 gaaaccgagtctgaatagggcgaaagtcacattttatagacccgaacccgggtgatctaa 321 Query: 118 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 177 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 178 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 237 |||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 382 aaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagctggt 441 Query: 238 tctccccgaaatgcgttgaggcgcagcagttgactggacatctag-gggtaaagcactgt 296 ||||||||||||| ||| ||||||||| || | |||||| |||||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaacgattaaatctagggggtaaagcactgt 501 Query: 297 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 346 |||||||||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 502 ttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaatac 551 Score = 208 bits (105), Expect = 2e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 606 | ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcattctaccgaagctgtgg 789
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 281 bits (142), Expect = 1e-72 Identities = 230/258 (89%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 96 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 155 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 674 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaag 733 Query: 156 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 215 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 734 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 793 Query: 216 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 274 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 794 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataagg 853 Query: 275 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 334 | ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 854 ctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggca 913 Query: 335 aactctgaatactagata 352 |||||||||||||||||| Sbjct: 914 aactctgaatactagata 931 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 1063 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 1064 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 1123 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1124 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 281 bits (142), Expect = 1e-72 Identities = 230/258 (89%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 96 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 155 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 25483 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaag 25542 Query: 156 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 215 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 25543 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 25602 Query: 216 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 274 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 25603 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataagg 25662 Query: 275 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 334 | ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 25663 ctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggca 25722 Query: 335 aactctgaatactagata 352 |||||||||||||||||| Sbjct: 25723 aactctgaatactagata 25740 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 25872 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 25873 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 25932 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25933 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 281 bits (142), Expect = 1e-72 Identities = 256/294 (87%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||| | |||||| | |||||| |||| |||||||||| || |||| Sbjct: 2197 tagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacccggatgat 2256 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| |||| |||||||||||||| | | | ||| || ||||||||||||||||||||| Sbjct: 2257 ctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccgactgatgt 2316 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| ||||||||||||||||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 2317 tgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccggagctagc 2376 Query: 234 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 293 ||||||||||||||||||||||||||||||| ||| | | | | |||||||||||| Sbjct: 2377 tggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttgggggtaaagcac 2436 Query: 294 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 347 ||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 2437 tgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatact 2490 Score = 236 bits (119), Expect = 7e-59 Identities = 200/227 (88%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 |||||||||||||| | ||| |||||||||||||||||| |||| ||||| ||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccaggag 2624 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2625 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 2684 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 ||||| ||| ||||||||| |||||| || ||||||||||||||||| Sbjct: 2685 tgcgccgaaaatgaacgggactaagcaatttgccgaagctgtgggat 2731
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 58 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 117 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 118 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 177 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 178 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 237 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 238 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 296 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 297 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 346 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 58 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 117 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 118 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 177 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 178 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 237 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 238 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 296 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 297 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 346 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 216 bits (109), Expect = 7e-53 Identities = 199/229 (86%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 189991 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 189992 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 190051 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| Sbjct: 190052 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt 190100 Score = 216 bits (109), Expect = 7e-53 Identities = 199/229 (86%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 151418 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 151419 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 151478 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| Sbjct: 151479 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt 151527
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 280 bits (141), Expect = 5e-72 Identities = 264/303 (87%), Gaps = 4/303 (1%) Strand = Plus / Plus Query: 51 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 110 ||||||||||||||||||| |||||||||| |||||| |||| |||||||||| |||| Sbjct: 638 ccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgggt 696 Query: 111 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 170 |||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| || Sbjct: 697 gatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgaccga 756 Query: 171 tgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagct 230 ||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||||| Sbjct: 757 tgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggagct 816 Query: 231 agctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctaggggta 287 |||||||||||||||||||||||||||||||||| || ||| || |||||||||| Sbjct: 817 agctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctaggggta 876 Query: 288 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 347 |||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 877 aagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 936 Query: 348 aga 350 ||| Sbjct: 937 aga 939 Score = 214 bits (108), Expect = 3e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1076 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1077 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1136 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagct 602 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 1137 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 1176
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 280 bits (141), Expect = 5e-72 Identities = 264/303 (87%), Gaps = 4/303 (1%) Strand = Plus / Plus Query: 51 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 110 ||||||||||||||||||| |||||||||| |||||| |||| |||||||||| |||| Sbjct: 2520 ccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgggt 2578 Query: 111 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 170 |||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| || Sbjct: 2579 gatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgaccga 2638 Query: 171 tgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagct 230 ||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||||| Sbjct: 2639 tgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggagct 2698 Query: 231 agctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctaggggta 287 |||||||||||||||||||||||||||||||||| || ||| || |||||||||| Sbjct: 2699 agctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctaggggta 2758 Query: 288 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 347 |||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 2759 aagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 2818 Query: 348 aga 350 ||| Sbjct: 2819 aga 2821 Score = 214 bits (108), Expect = 3e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 2958 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 2959 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 3018 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagct 602 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 3019 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 3058
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 274 bits (138), Expect = 3e-70 Identities = 256/293 (87%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 58 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 117 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 188644 gaaagcgagcttgaatagagcgttggtcactatttatagacccgaacccggatgatctag 188703 Query: 118 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 177 ||||| ||||| |||||||| | | | |||||| |||||||||||||||| |||||||| Sbjct: 188704 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactaatgttgaa 188763 Query: 178 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 237 ||| |||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 188764 aaattagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 188823 Query: 238 tctccccgaaatgcgttgaggcgcagcagttga--ctggacatctaggggtaaagcactg 295 ||||||||||||| ||||||||||||| ||||| || | | |||||||||||||||| Sbjct: 188824 tctccccgaaatgtgttgaggcgcagcggttgatgct-taaacttaggggtaaagcactg 188882 Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 348 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 188883 tttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 188935 Score = 266 bits (134), Expect = 8e-68 Identities = 255/293 (87%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 58 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 117 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150201 gaaagcgagcttgaatagagcgttggtcactatttatagacccgaacccggatgatctag 150260 Query: 118 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 177 ||||| ||||| |||||||| | | | |||||| ||||||||| |||||| |||||||| Sbjct: 150261 ccatggccagggtgaagcttaggtaacactaagtggaggtccgagccgactaatgttgaa 150320 Query: 178 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 237 ||| |||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 150321 aaattagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 150380 Query: 238 tctccccgaaatgcgttgaggcgcagcagttga--ctggacatctaggggtaaagcactg 295 ||||||||||||| ||||||||||||| ||||| || | | |||||||||||||||| Sbjct: 150381 tctccccgaaatgtgttgaggcgcagcggttgatgct-taaacttaggggtaaagcactg 150439 Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 348 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 150440 tttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 150492 Score = 188 bits (95), Expect = 1e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 385 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 444 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 445 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 504 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 189011 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 189070 Query: 505 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 564 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 189071 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 189130 Query: 565 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 ||| ||| ||||||||| ||||| || ||||||||||||||||||| Sbjct: 189131 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt 189177 Score = 188 bits (95), Expect = 1e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 385 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 444 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 445 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 504 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 150568 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 150627 Query: 505 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 564 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 150628 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 150687 Query: 565 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 611 ||| ||| ||||||||| ||||| || ||||||||||||||||||| Sbjct: 150688 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt 150734
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 272 bits (137), Expect = 1e-69 Identities = 203/225 (90%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccagga 688 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 |||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 689 ggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctc 748 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 606 ||||| ||| |||||||||||||||||| ||||||||||||||| Sbjct: 749 ctgcgccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 235 ggttctccccgaaatgcgttgaggcgcagcagttg 269 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 282 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 341 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 342 aatac 346 ||||| Sbjct: 550 aatac 554
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 91 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 150 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 151 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 210 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 211 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 270 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 271 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 327 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 328 cgaggcaaactctgaatact 347 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 206 bits (104), Expect = 6e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 1084 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 550 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 91 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 150 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 151 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 210 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 211 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 270 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 271 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 327 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 328 cgaggcaaactctgaatact 347 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 206 bits (104), Expect = 6e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 2822 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 550 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 270 bits (136), Expect = 5e-69 Identities = 158/164 (96%), Gaps = 1/164 (0%) Strand = Plus / Plus Query: 464 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 523 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 524 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 583 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 584 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 627 |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtag 163
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 270 bits (136), Expect = 5e-69 Identities = 208/232 (89%) Strand = Plus / Plus Query: 379 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 438 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 439 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 498 ||||||||||||| |||| |||||||||||||||||| ||| | |||| ||||| ||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaacca 1067 Query: 499 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 558 |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 1068 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcg 1127 Query: 559 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 610 | ||||||| ||| ||||||||| ||||||| |||||||||||||| |||| Sbjct: 1128 ctcttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtgagatg 1179 Score = 260 bits (131), Expect = 5e-66 Identities = 258/299 (86%), Gaps = 6/299 (2%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||||||||| ||||||||| ||||||| ||| |||||||||| |||||||| Sbjct: 635 agcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaacccgggtgatc 694 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || ||||| |||||| ||||||||| |||||| | || |||||||||||| || ||| Sbjct: 695 taaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaaccgaccgacgtt 754 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||||| || |||||||||||||||||||||||||||| ||| |||||| | ||||||||| Sbjct: 755 gaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaactcggagctagct 814 Query: 235 ggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca-tctaggggtaa 288 |||||||||||||||||||||||||||||| || || ||| || ||||||||||| Sbjct: 815 ggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcagtctaggggtaa 874 Query: 289 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 347 |||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||| Sbjct: 875 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatact 933
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 268 bits (135), Expect = 2e-68 Identities = 189/207 (91%) Strand = Plus / Minus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||| ||||||||||| |||| || |||| |||||||||| ||||||| Sbjct: 5967 tagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaacccgggtgat 5908 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||||||||||||| Sbjct: 5907 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgatgt 5848 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 5847 tgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 5788 Query: 234 tggttctccccgaaatgcgttgaggcg 260 |||||||||||||||| |||||||||| Sbjct: 5787 tggttctccccgaaatacgttgaggcg 5761 Score = 168 bits (85), Expect = 1e-38 Identities = 166/193 (86%) Strand = Plus / Minus Query: 395 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 454 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 5586 Query: 455 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 514 || | | || |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 5585 atcaacactaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 5526 Query: 515 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 574 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 5525 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 5466 Query: 575 gaacggggctaag 587 ||||||||||||| Sbjct: 5465 gaacggggctaag 5453 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 346 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 268 bits (135), Expect = 2e-68 Identities = 189/207 (91%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||| ||||||||||| |||| || |||| |||||||||| ||||||| Sbjct: 211805 tagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaacccgggtgat 211864 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||||||||||||| Sbjct: 211865 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgatgt 211924 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 211925 tgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 211984 Query: 234 tggttctccccgaaatgcgttgaggcg 260 |||||||||||||||| |||||||||| Sbjct: 211985 tggttctccccgaaatacgttgaggcg 212011 Score = 168 bits (85), Expect = 1e-38 Identities = 166/193 (86%) Strand = Plus / Plus Query: 395 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 454 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 212186 Query: 455 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 514 || | | || |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 212187 atcaacactaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 212246 Query: 515 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 574 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 212247 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 212306 Query: 575 gaacggggctaag 587 ||||||||||||| Sbjct: 212307 gaacggggctaag 212319 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 346 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 268 bits (135), Expect = 2e-68 Identities = 189/207 (91%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 492 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 551 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||||||||||||| Sbjct: 552 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgatgt 611 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 612 tgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 671 Query: 234 tggttctccccgaaatgcgttgaggcg 260 |||||||||||||||| |||||||||| Sbjct: 672 tggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 346 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 268 bits (135), Expect = 2e-68 Identities = 260/300 (86%), Gaps = 5/300 (1%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcga--ttgtcactgcttatggacccgaacctgggtga 112 ||||||||| ||||| |||||||| | | |||||| ||| ||||||||||| |||||| Sbjct: 616 agcgaaagcaagtctgaatagggcaaaatcgtcactttttagggacccgaacccgggtga 675 Query: 113 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 172 |||| ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||| Sbjct: 676 tctaaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatg 735 Query: 173 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 232 ||||| |||| ||||||||| |||||||||||||||||||||| |||||| | ||||||| Sbjct: 736 ttgaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctag 795 Query: 233 ctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaa 289 |||||||||||||||||||||||||||||||| ||| ||| || |||||||||||| Sbjct: 796 ctggttctccccgaaatgcgttgaggcgcagcggttggcgacgggctgtctaggggtaaa 855 Query: 290 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 349 |||||||||||||||||||| || || |||||||||||| ||||||| ||||||||| Sbjct: 856 gcactgtttcggtgcgggctacgaaagtggtaccaaatcgtagcaaactaagaatactag 915 Score = 220 bits (111), Expect = 4e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||| |||| ||||| |||| ||||||||||| | |||| | ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggag 1052 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1053 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1112 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 ||||| ||| || ||||| ||||||| ||||||||||| |||||| Sbjct: 1113 tgcgccgaaaattcacgggactaagcggcctgccgaagctatgggat 1159
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 8e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 58 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 117 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 118 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 177 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 178 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 237 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 238 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 294 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 295 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 346 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 230 bits (116), Expect = 4e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagacaactagga 685 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 | ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 262 bits (132), Expect = 1e-66 Identities = 132/132 (100%) Strand = Plus / Minus Query: 496 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 556 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 615 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 616 atgcatcggtag 627 |||||||||||| Sbjct: 20750 atgcatcggtag 20739
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 262 bits (132), Expect = 1e-66 Identities = 257/298 (86%), Gaps = 3/298 (1%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||| ||||| ||||||||| |||||||| |||||||||||||||| |||||||| Sbjct: 137128 agcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaacccgggtgatc 137187 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || |||||||||||||||||||||| | |||| ||| || | |||||||||| |||||| Sbjct: 137188 taaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaaccgaccgatgtt 137247 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| |||| |||||||||||||||||||||| ||||| | | |||||| | ||||||||| Sbjct: 137248 gaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactcggagctagct 137307 Query: 235 ggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaagc 291 ||||||| ||||||| ||||||||||||| ||| ||| || |||||||||||||| Sbjct: 137308 ggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtctaggggtaaagc 137367 Query: 292 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 349 ||||||||||||||||||| | | |||||||||||| |||||||| ||||||||| Sbjct: 137368 actgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcagaatactag 137425 Score = 262 bits (132), Expect = 1e-66 Identities = 257/298 (86%), Gaps = 3/298 (1%) Strand = Plus / Minus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||| ||||| ||||||||| |||||||| |||||||||||||||| |||||||| Sbjct: 48416 agcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaacccgggtgatc 48357 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || |||||||||||||||||||||| | |||| ||| || | |||||||||| |||||| Sbjct: 48356 taaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaaccgaccgatgtt 48297 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| |||| |||||||||||||||||||||| ||||| | | |||||| | ||||||||| Sbjct: 48296 gaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactcggagctagct 48237 Query: 235 ggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaagc 291 ||||||| ||||||| ||||||||||||| ||| ||| || |||||||||||||| Sbjct: 48236 ggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtctaggggtaaagc 48177 Query: 292 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 349 ||||||||||||||||||| | | |||||||||||| |||||||| ||||||||| Sbjct: 48176 actgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcagaatactag 48119 Score = 228 bits (115), Expect = 2e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 137502 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 137561 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 137562 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 137621 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137622 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 228 bits (115), Expect = 2e-56 Identities = 199/227 (87%) Strand = Plus / Minus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 48042 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 47983 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 47982 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 47923 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47922 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 262 bits (132), Expect = 1e-66 Identities = 201/224 (89%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccagga 1063 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1064 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 1123 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 605 | |||| ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1124 tcgcgccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167 Score = 242 bits (122), Expect = 1e-60 Identities = 188/210 (89%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||| ||||| ||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 633 agcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaacccgggtgatc 692 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || |||||||||||||||||||| | ||| ||| ||||||||||||||| |||||| Sbjct: 693 taaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaaccgaccgatgtt 752 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| |||| || ||||||||||||||||||||||||||||| |||||| | ||||||||| Sbjct: 753 gaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaactcggagctagct 812 Query: 235 ggttctccccgaaatgcgttgaggcgcagc 264 |||||||||||||||||||||||||||||| Sbjct: 813 ggttctccccgaaatgcgttgaggcgcagc 842 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 277 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 336 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 337 ctctgaatactagata 352 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934 Score = 50.1 bits (25), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagg 32 ||||||||| |||| ||||||||||||||||| Sbjct: 584 ccggcgacttataggcagtggcttggttaagg 615
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 260 bits (131), Expect = 5e-66 Identities = 188/207 (90%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||||||||||||| |||||| || |||| |||||||||| |||||| Sbjct: 356108 tagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgat 356167 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||||||||||||| Sbjct: 356168 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgatgt 356227 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| |||||||||||||| |||||||||||||||||||||| ||||||| |||||||| Sbjct: 356228 tgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagc 356287 Query: 234 tggttctccccgaaatgcgttgaggcg 260 |||||||||||||||| |||||||||| Sbjct: 356288 tggttctccccgaaatacgttgaggcg 356314 Score = 137 bits (69), Expect = 5e-29 Identities = 162/193 (83%) Strand = Plus / Plus Query: 395 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 454 ||||||||||||| || |||| ||||||||||||| || | |||||||||| ||| || Sbjct: 356430 tgggggataagctccacactcgaaagggaaacagcccagaccgccagctaaggtcccaaa 356489 Query: 455 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 514 || | || |||||||||||||||||| ||| ||||| ||||||||||||| ||||| Sbjct: 356490 atcagtactaagtgataaaggaggtgggattgcttagacaaccaggaggtttgcttagaa 356549 Query: 515 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 574 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 356550 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 356609 Query: 575 gaacggggctaag 587 ||||||||||||| Sbjct: 356610 gaacggggctaag 356622 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcga 330 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 2e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 58 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 117 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 118 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 177 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 178 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 237 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 238 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 294 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 295 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 346 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 214 bits (108), Expect = 3e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagacaactagga 685 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 605 ||||| ||| |||||||||||| ||| || | ||||| ||||| Sbjct: 746 ctgcgccgaatatgaacggggctgagccatgtaccgaaactgtg 789
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 258 bits (130), Expect = 2e-65 Identities = 266/308 (86%), Gaps = 10/308 (3%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacccgaacctgg 108 ||||||||||||||||||||||||||||| |||||| | |||||||||||||| || Sbjct: 771 tagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacccgaacccgg 830 Query: 109 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 168 |||||||| ||||||||||||||||||||| | | || ||| ||||||||||||||| Sbjct: 831 gtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtccgaaccgacc 890 Query: 169 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 228 ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | ||| Sbjct: 891 gatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactcggag 950 Query: 229 ctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggacatctagggg 285 |||||||| ||||||||||||||||||||||||||| | ||||| | |||||| || Sbjct: 951 ctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagctatctagagg 1009 Query: 286 taaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 344 |||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| |||| Sbjct: 1010 taaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactcagaat 1069 Query: 345 actagata 352 |||||||| Sbjct: 1070 actagata 1077 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 417 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 476 ||||||||||||||| ||||||||||||||||||||||||| | || |||| |||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatggtcactaagtggaaaagga 1185 Query: 477 ggtgggggtgcaaagacagccaggaggtttgcctagaa 514 ||| | |||| | ||| ||||||||||||| ||||| Sbjct: 1186 tgtgatgttgcagaaacaaccaggaggtttgcttagaa 1223 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 510 tagaagcagccaccctttaaagagtgcgtaatagctcactg 550 |||||||||| | |||| ||||||||||||||||||||||| Sbjct: 1848 tagaagcagcaagccttaaaagagtgcgtaatagctcactg 1888
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 258 bits (130), Expect = 2e-65 Identities = 266/308 (86%), Gaps = 10/308 (3%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacccgaacctgg 108 ||||||||||||||||||||||||||||| |||||| | |||||||||||||| || Sbjct: 771 tagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacccgaacccgg 830 Query: 109 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 168 |||||||| ||||||||||||||||||||| | | || ||| ||||||||||||||| Sbjct: 831 gtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtccgaaccgacc 890 Query: 169 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 228 ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | ||| Sbjct: 891 gatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactcggag 950 Query: 229 ctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggacatctagggg 285 |||||||| ||||||||||||||||||||||||||| | ||||| | |||||| || Sbjct: 951 ctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagctatctagagg 1009 Query: 286 taaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 344 |||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| |||| Sbjct: 1010 taaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactcagaat 1069 Query: 345 actagata 352 |||||||| Sbjct: 1070 actagata 1077 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 417 agagggaaacagcccggatcaccagctaaggcccctaaatg 457 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 256 bits (129), Expect = 8e-65 Identities = 267/307 (86%), Gaps = 7/307 (2%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtg 111 |||||||||||||||| ||||||||| | |||||| |||||||||||||||| ||||| Sbjct: 661 tagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaacccgggtg 720 Query: 112 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 171 ||||| |||||||||||||||||||||| | || | ||| ||||||||||||||| ||| Sbjct: 721 atctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccgaccgat 780 Query: 172 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 231 |||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | |||||| Sbjct: 781 gttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcggagcta 840 Query: 232 gctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctaggggtaa 288 ||||| ||||||||||||||||||||||||||| || || || || |||| ||||||| Sbjct: 841 gctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttggggtaa 899 Query: 289 agc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 347 ||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| |||||| Sbjct: 900 agctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcagaataca 959 Query: 348 agatatg 354 ||||||| Sbjct: 960 agatatg 966 Score = 174 bits (88), Expect = 2e-40 Identities = 190/224 (84%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||||||||| | || |||| |||||| ||| | ||| | ||| ||||||| Sbjct: 1038 taaggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggag 1097 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||| ||||||||||||||||| ||||||||||||||||||||||| | |||| || Sbjct: 1098 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttct 1157 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 606 ||||| || ||| |||| ||||| || ||||||||||||||| Sbjct: 1158 tgcgccgataatggccgggactaagtgacctgccgaagctgtgg 1201
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Minus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2138151 tagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgggtgat 2138092 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 2138091 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 2138032 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 2138031 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 2137972 Query: 234 tggttctccccgaaatgcgttgaggcg 260 |||||||||||||||| |||||||||| Sbjct: 2137971 tggttctccccgaaatacgttgaggcg 2137945 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 476709 tagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgggtgat 476768 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 476769 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 476828 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 476829 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 476888 Query: 234 tggttctccccgaaatgcgttgaggcg 260 |||||||||||||||| |||||||||| Sbjct: 476889 tggttctccccgaaatacgttgaggcg 476915 Score = 184 bits (93), Expect = 2e-43 Identities = 168/193 (87%) Strand = Plus / Minus Query: 395 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 454 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 455 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 514 || | | || |||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 2137769 atcaacactaagtgataaaggaggtgggattgcatagacaaccaggaggtttgcctagaa 2137710 Query: 515 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 574 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 2137709 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 2137650 Query: 575 gaacggggctaag 587 ||||||||||||| Sbjct: 2137649 gaacggggctaag 2137637 Score = 184 bits (93), Expect = 2e-43 Identities = 168/193 (87%) Strand = Plus / Plus Query: 395 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 454 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 455 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 514 || | | || |||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 477091 atcaacactaagtgataaaggaggtgggattgcatagacaaccaggaggtttgcctagaa 477150 Query: 515 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 574 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 477151 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 477210 Query: 575 gaacggggctaag 587 ||||||||||||| Sbjct: 477211 gaacggggctaag 477223 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 346 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 346 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Minus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 339402 tagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgggtgat 339343 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 339342 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 339283 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 339282 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 339223 Query: 234 tggttctccccgaaatgcgttgaggcg 260 |||||||||||||||| |||||||||| Sbjct: 339222 tggttctccccgaaatacgttgaggcg 339196 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Minus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 132462 tagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgggtgat 132403 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 132402 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 132343 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 132342 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 132283 Query: 234 tggttctccccgaaatgcgttgaggcg 260 |||||||||||||||| |||||||||| Sbjct: 132282 tggttctccccgaaatacgttgaggcg 132256 Score = 161 bits (81), Expect = 3e-36 Identities = 165/193 (85%) Strand = Plus / Minus Query: 395 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 454 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 339080 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 339021 Query: 455 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 514 || | | || |||||||||||||||||| | || ||||| ||||||||||||||||||| Sbjct: 339020 atcaacactaagtgataaaggaggtgggattccatagacaaccaggaggtttgcctagaa 338961 Query: 515 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 574 ||||||| ||| || |||||||||||||||||||| ||||| | | ||||| ||| || Sbjct: 338960 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagggatcctgcgccgaaaat 338901 Query: 575 gaacggggctaag 587 ||||||||||||| Sbjct: 338900 gaacggggctaag 338888 Score = 161 bits (81), Expect = 3e-36 Identities = 165/193 (85%) Strand = Plus / Minus Query: 395 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 454 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 132140 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 132081 Query: 455 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 514 || | | || |||||||||||||||||| | || ||||| ||||||||||||||||||| Sbjct: 132080 atcaacactaagtgataaaggaggtgggattccatagacaaccaggaggtttgcctagaa 132021 Query: 515 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 574 ||||||| ||| || |||||||||||||||||||| ||||| | | ||||| ||| || Sbjct: 132020 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagggatcctgcgccgaaaat 131961 Query: 575 gaacggggctaag 587 ||||||||||||| Sbjct: 131960 gaacggggctaag 131948 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 346 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 346 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 492 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 551 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 552 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 611 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 612 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 671 Query: 234 tggttctccccgaaatgcgttgaggcg 260 |||||||||||||||| |||||||||| Sbjct: 672 tggttctccccgaaatacgttgaggcg 698
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 492 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 551 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 552 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 611 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 612 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 671 Query: 234 tggttctccccgaaatgcgttgaggcg 260 |||||||||||||||| |||||||||| Sbjct: 672 tggttctccccgaaatacgttgaggcg 698
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 492 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 551 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 552 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 611 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 612 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 671 Query: 234 tggttctccccgaaatgcgttgaggcg 260 |||||||||||||||| |||||||||| Sbjct: 672 tggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 346 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 492 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 551 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 552 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 611 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 612 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 671 Query: 234 tggttctccccgaaatgcgttgaggcg 260 |||||||||||||||| |||||||||| Sbjct: 672 tggttctccccgaaatacgttgaggcg 698
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 492 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 551 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 552 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 611 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 612 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 671 Query: 234 tggttctccccgaaatgcgttgaggcg 260 |||||||||||||||| |||||||||| Sbjct: 672 tggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 346 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 252 bits (127), Expect = 1e-63 Identities = 233/267 (87%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 83 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 142 ||||||| ||| |||||||||| || ||||||| |||| ||||| |||||||| | | Sbjct: 2429 gtcactgtttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggta 2488 Query: 143 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 202 | |||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2489 acactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattag 2548 Query: 203 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 262 ||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 2549 gggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgca 2608 Query: 263 gcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggta 321 || ||||| | | | ||||||||||||||||||||||| ||||||| | ||||||| Sbjct: 2609 gcggttgatgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggta 2668 Query: 322 ccaaatcgaggcaaactctgaatacta 348 ||||||||||||||||||||||||||| Sbjct: 2669 ccaaatcgaggcaaactctgaatacta 2695 Score = 159 bits (80), Expect = 1e-35 Identities = 146/168 (86%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 |||||||||||||| || |||| |||||| ||||| |||| ||||| ||||||| Sbjct: 2769 taaggcccctaaatatttactaagtggcaaaggaagtgggaatgcatagacaaccaggag 2828 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 550 |||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 2829 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactg 2876
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 250 bits (126), Expect = 5e-63 Identities = 198/222 (89%) Strand = Plus / Minus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 170531 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 170472 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 170471 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 170412 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 170411 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 170352 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 604 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 170351 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 170310 Score = 250 bits (126), Expect = 5e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 122395 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 122454 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 122455 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 122514 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 122515 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 122574 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 604 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 122575 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 122616 Score = 186 bits (94), Expect = 6e-44 Identities = 181/210 (86%) Strand = Plus / Minus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||||||||| | ||||| ||||||| | || |||||||||| |||||||| Sbjct: 170864 agcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaacccgggtgatc 170805 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || |||||||||||||||||||||| | | || | || | |||||||||| |||||| Sbjct: 170804 taaccatgaccaggatgaagcttgggtaacaccttgtggaagaccgaaccgaccgatgtt 170745 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| |||| |||||||||||||||||||||||||||||||| |||||| | ||||||||| Sbjct: 170744 gaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagct 170685 Query: 235 ggttctccccgaaatgcgttgaggcgcagc 264 || ||||||||||||||||||||||||||| Sbjct: 170684 ggatctccccgaaatgcgttgaggcgcagc 170655 Score = 186 bits (94), Expect = 6e-44 Identities = 181/210 (86%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||||||||| | ||||| ||||||| | || |||||||||| |||||||| Sbjct: 122062 agcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaacccgggtgatc 122121 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || |||||||||||||||||||||| | | || | || | |||||||||| |||||| Sbjct: 122122 taaccatgaccaggatgaagcttgggtaacaccttgtggaagaccgaaccgaccgatgtt 122181 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| |||| |||||||||||||||||||||||||||||||| |||||| | ||||||||| Sbjct: 122182 gaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagct 122241 Query: 235 ggttctccccgaaatgcgttgaggcgcagc 264 || ||||||||||||||||||||||||||| Sbjct: 122242 ggatctccccgaaatgcgttgaggcgcagc 122271 Score = 93.7 bits (47), Expect = 7e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 281 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 340 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 170617 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 170558 Query: 341 gaatact 347 ||||||| Sbjct: 170557 gaatact 170551 Score = 93.7 bits (47), Expect = 7e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 281 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 340 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 122309 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 122368 Query: 341 gaatact 347 ||||||| Sbjct: 122369 gaatact 122375
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 5e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 235 ggttctccccgaaatgcgttgaggcgcagc 264 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 224 bits (113), Expect = 3e-55 Identities = 183/205 (89%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| ||||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggag 687 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 563 tgcgctgaagatgaacggggctaag 587 | ||| ||| ||||||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaag 771 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 282 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 341 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 342 aatac 346 ||||| Sbjct: 548 aatac 552
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 5e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 235 ggttctccccgaaatgcgttgaggcgcagc 264 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 248 bits (125), Expect = 2e-62 Identities = 201/225 (89%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||| ||| ||||||| ||| |||||||||||||||| | ||||| |||| |||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccagga 686 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 687 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 746 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 606 || ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 747 tt-cgccgaaaatgaacggggctaagcagtctaccgaagctgtgg 790 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 282 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 341 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 342 aatac 346 ||||| Sbjct: 548 aatac 552
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 250 bits (126), Expect = 5e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 986 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 1045 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 1046 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 1105 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 1106 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctct 1165 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 604 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1166 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 1207 Score = 186 bits (94), Expect = 6e-44 Identities = 181/210 (86%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||||||||| | ||||| ||||||| | || |||||||||| |||||||| Sbjct: 653 agcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaacccgggtgatc 712 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || |||||||||||||||||||||| | | || | || | |||||||||| |||||| Sbjct: 713 taaccatgaccaggatgaagcttgggtaacaccttgtggaagaccgaaccgaccgatgtt 772 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| |||| |||||||||||||||||||||||||||||||| |||||| | ||||||||| Sbjct: 773 gaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagct 832 Query: 235 ggttctccccgaaatgcgttgaggcgcagc 264 || ||||||||||||||||||||||||||| Sbjct: 833 ggatctccccgaaatgcgttgaggcgcagc 862 Score = 93.7 bits (47), Expect = 7e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 281 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 340 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 900 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 959 Query: 341 gaatact 347 ||||||| Sbjct: 960 gaatact 966
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 5e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 153 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 212 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 213 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 272 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 273 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 329 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 330 aggcaaactctgaatactag 349 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 180 bits (91), Expect = 4e-42 Identities = 198/231 (85%), Gaps = 2/231 (0%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 441 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 ||||||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| | Sbjct: 1013 ctaaggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaa 1072 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 1132 Query: 562 ttgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgt 611 | |||| ||| ||||| ||| || ||| |||||||||||| |||| |||| Sbjct: 1133 tggcgccgaaaatgaaagggactcaaggaatctgccgaagccgtggcatgt 1183 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 82 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 137 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719 Score = 50.1 bits (25), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1 ccggcgactcatagncagtggcttggttaagg 32 ||||||||| |||| ||||||||||||||||| Sbjct: 587 ccggcgacttataggcagtggcttggttaagg 618
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 246 bits (124), Expect = 7e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 793 Score = 212 bits (107), Expect = 1e-51 Identities = 182/207 (87%) Strand = Plus / Plus Query: 58 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 117 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 118 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 177 ||||| |||||||||||||||| | | || ||| ||||||||||||||| ||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaa 381 Query: 178 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 237 |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcggcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 238 tctccccgaaatgcgttgaggcgcagc 264 ||||||||||||| ||||||||||||| Sbjct: 442 tctccccgaaatgtgttgaggcgcagc 468 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 282 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 341 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 342 aatac 346 ||||| Sbjct: 547 aatac 551
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 246 bits (124), Expect = 7e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5434418 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5434359 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5434358 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5434299 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5434298 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5434239 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5434238 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5434191 Score = 246 bits (124), Expect = 7e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 3897020 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 3897079 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 3897080 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 3897139 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 3897140 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 3897199 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 3897200 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 3897247 Score = 246 bits (124), Expect = 7e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2807139 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2807080 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2807079 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2807020 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2807019 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2806960 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2806959 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2806912 Score = 246 bits (124), Expect = 7e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 1005863 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 1005922 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 1005923 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 1005982 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 1005983 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 1006042 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 1006043 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 1006090 Score = 212 bits (107), Expect = 1e-51 Identities = 182/207 (87%) Strand = Plus / Minus Query: 58 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 117 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 5434722 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 5434663 Query: 118 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 177 ||||| |||||||||||||||| | | || ||| ||||||||||||||| ||||||||| Sbjct: 5434662 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaa 5434603 Query: 178 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 237 |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5434602 aaatcggcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 5434543 Query: 238 tctccccgaaatgcgttgaggcgcagc 264 ||||||||||||| ||||||||||||| Sbjct: 5434542 tctccccgaaatgtgttgaggcgcagc 5434516 Score = 212 bits (107), Expect = 1e-51 Identities = 182/207 (87%) Strand = Plus / Plus Query: 58 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 117 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 3896716 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 3896775 Query: 118 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 177 ||||| |||||||||||||||| | | || ||| ||||||||||||||| ||||||||| Sbjct: 3896776 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaa 3896835 Query: 178 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 237 |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 3896836 aaatcggcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 3896895 Query: 238 tctccccgaaatgcgttgaggcgcagc 264 ||||||||||||| ||||||||||||| Sbjct: 3896896 tctccccgaaatgtgttgaggcgcagc 3896922 Score = 212 bits (107), Expect = 1e-51 Identities = 182/207 (87%) Strand = Plus / Minus Query: 58 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 117 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 2807443 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 2807384 Query: 118 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 177 ||||| |||||||||||||||| | | || ||| ||||||||||||||| ||||||||| Sbjct: 2807383 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaa 2807324 Query: 178 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 237 |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 2807323 aaatcggcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 2807264 Query: 238 tctccccgaaatgcgttgaggcgcagc 264 ||||||||||||| ||||||||||||| Sbjct: 2807263 tctccccgaaatgtgttgaggcgcagc 2807237 Score = 212 bits (107), Expect = 1e-51 Identities = 182/207 (87%) Strand = Plus / Plus Query: 58 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 117 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 1005559 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 1005618 Query: 118 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 177 ||||| |||||||||||||||| | | || ||| ||||||||||||||| ||||||||| Sbjct: 1005619 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaa 1005678 Query: 178 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 237 |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1005679 aaatcggcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 1005738 Query: 238 tctccccgaaatgcgttgaggcgcagc 264 ||||||||||||| ||||||||||||| Sbjct: 1005739 tctccccgaaatgtgttgaggcgcagc 1005765 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 282 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 341 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5434497 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5434438 Query: 342 aatac 346 ||||| Sbjct: 5434437 aatac 5434433 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 282 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 341 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 3896941 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 3897000 Query: 342 aatac 346 ||||| Sbjct: 3897001 aatac 3897005 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 282 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 341 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2807218 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2807159 Query: 342 aatac 346 ||||| Sbjct: 2807158 aatac 2807154 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 282 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 341 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 1005784 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 1005843 Query: 342 aatac 346 ||||| Sbjct: 1005844 aatac 1005848
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 246 bits (124), Expect = 7e-62 Identities = 263/304 (86%), Gaps = 4/304 (1%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgggtgat 113 ||||||||| ||||| ||||||||| ||||||||| |||||||||||||||| ||||||| Sbjct: 658 agcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaacccgggtgat 717 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 |||| |||| |||||||||||||||| | | || ||| ||||||||||||||| ||||| Sbjct: 718 ctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgt 777 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| |||| ||||||||| |||| |||||| ||||| ||| |||||| | |||||||| Sbjct: 778 tgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaactcggagctagc 837 Query: 234 tggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atctaggggtaaagc 291 ||| ||||||||||||||||||||||||||| || | ||| | |||| |||||||||| Sbjct: 838 tggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatcttggggtaaagc 897 Query: 292 -actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 350 ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| |||||| ||| Sbjct: 898 gactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactcagaatacaaga 957 Query: 351 tatg 354 |||| Sbjct: 958 tatg 961 Score = 165 bits (83), Expect = 2e-37 Identities = 188/223 (84%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||||||||| | || |||| ||||||| ||| | ||| | ||| |||||| Sbjct: 1033 taaggcccctaaatggtcactaagtggtaaaggatgtgagaatgctgaaacaaccaggaa 1092 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 ||| || |||||||||| ||| || ||||||||||||||||||||||| | |||| || Sbjct: 1093 gttcgcttagaagcagctacctttcaaagagtgcgtaatagctcactggtaaagcgttct 1152 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 605 ||||| || ||| |||| ||||| || |||||||||||||| Sbjct: 1153 tgcgccgataatggccgggactaagtgacctgccgaagctgtg 1195
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 246 bits (124), Expect = 7e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 ||||||||||| ||||||||||||| ||| ||||||||||||||||||| || || | | Sbjct: 954 gccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcgg 1013 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 ||||||||||||||||| || |||||||||||||||| | |||| ||||| |||||| Sbjct: 1014 ctaaggcccctaaatgattactaagtgataaaggaggtgagagtgcccagacaaccagga 1073 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1074 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 1133 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 |||||| ||| ||||||||| ||||| |||||||||||||||||||| Sbjct: 1134 ttgcgccgaaaatgaacgggactaagtaatctgccgaagctgtgggat 1181 Score = 234 bits (118), Expect = 3e-58 Identities = 256/300 (85%), Gaps = 4/300 (1%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||||||||| | |||||| ||||| || ||| |||||||||| |||||||| Sbjct: 642 agcgaaagcgagtctgataagggcgtctgtcattggctatagacccgaacccgggtgatc 701 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || || | ||||||||| ||||| | | |||||| ||||||||||||||| |||||| Sbjct: 702 taaccgcggtcaggatgaaacttgggtaagactaagtggaggtccgaaccgaccgatgtt 761 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| |||| |||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 762 gaaaaatcggcggatgaactgtggttaggggtgaaatgccaatcgaactcggagctagct 821 Query: 235 ggttctccccgaaatgcgttgaggcgcagcagtt---gactggaca-tctaggggtaaag 290 |||||||||||||||||||||||||||||| ||| || | | | |||||||||| || Sbjct: 822 ggttctccccgaaatgcgttgaggcgcagcggttgatgattaggctgtctaggggtagag 881 Query: 291 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 350 |||||| ||||||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 882 cactgtctcggtgcgggctgcgagagcggtaccaaatcgtagcaaactccgaatactaga 941
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 246 bits (124), Expect = 7e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5944458 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5944399 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5944398 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5944339 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5944338 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5944279 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5944278 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5944231 Score = 246 bits (124), Expect = 7e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 4916814 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 4916755 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 4916754 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 4916695 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 4916694 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 4916635 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4916634 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 4916587 Score = 246 bits (124), Expect = 7e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2503482 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2503541 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2503542 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2503601 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2503602 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2503661 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2503662 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2503709 Score = 246 bits (124), Expect = 7e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2378691 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2378750 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2378751 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2378810 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2378811 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2378870 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2378871 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2378918 Score = 212 bits (107), Expect = 1e-51 Identities = 182/207 (87%) Strand = Plus / Minus Query: 58 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 117 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 5944762 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 5944703 Query: 118 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 177 ||||| |||||||||||||||| | | || ||| ||||||||||||||| ||||||||| Sbjct: 5944702 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaa 5944643 Query: 178 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 237 |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5944642 aaatcggcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 5944583 Query: 238 tctccccgaaatgcgttgaggcgcagc 264 ||||||||||||| ||||||||||||| Sbjct: 5944582 tctccccgaaatgtgttgaggcgcagc 5944556 Score = 212 bits (107), Expect = 1e-51 Identities = 182/207 (87%) Strand = Plus / Minus Query: 58 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 117 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 4917118 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 4917059 Query: 118 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 177 ||||| |||||||||||||||| | | || ||| ||||||||||||||| ||||||||| Sbjct: 4917058 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaa 4916999 Query: 178 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 237 |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 4916998 aaatcggcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 4916939 Query: 238 tctccccgaaatgcgttgaggcgcagc 264 ||||||||||||| ||||||||||||| Sbjct: 4916938 tctccccgaaatgtgttgaggcgcagc 4916912 Score = 212 bits (107), Expect = 1e-51 Identities = 182/207 (87%) Strand = Plus / Plus Query: 58 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 117 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 2503178 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 2503237 Query: 118 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 177 ||||| |||||||||||||||| | | || ||| ||||||||||||||| ||||||||| Sbjct: 2503238 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaa 2503297 Query: 178 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 237 |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 2503298 aaatcggcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 2503357 Query: 238 tctccccgaaatgcgttgaggcgcagc 264 ||||||||||||| ||||||||||||| Sbjct: 2503358 tctccccgaaatgtgttgaggcgcagc 2503384 Score = 212 bits (107), Expect = 1e-51 Identities = 182/207 (87%) Strand = Plus / Plus Query: 58 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 117 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 2378387 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 2378446 Query: 118 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 177 ||||| |||||||||||||||| | | || ||| ||||||||||||||| ||||||||| Sbjct: 2378447 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaa 2378506 Query: 178 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 237 |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 2378507 aaatcggcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 2378566 Query: 238 tctccccgaaatgcgttgaggcgcagc 264 ||||||||||||| ||||||||||||| Sbjct: 2378567 tctccccgaaatgtgttgaggcgcagc 2378593 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 282 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 341 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5944537 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5944478 Query: 342 aatac 346 ||||| Sbjct: 5944477 aatac 5944473 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 282 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 341 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 4916893 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 4916834 Query: 342 aatac 346 ||||| Sbjct: 4916833 aatac 4916829 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 282 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 341 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2503403 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2503462 Query: 342 aatac 346 ||||| Sbjct: 2503463 aatac 2503467 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 282 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 341 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2378612 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2378671 Query: 342 aatac 346 ||||| Sbjct: 2378672 aatac 2378676
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 246 bits (124), Expect = 7e-62 Identities = 263/304 (86%), Gaps = 4/304 (1%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgggtgat 113 ||||||||| ||||| ||||||||| ||||||||| |||||||||||||||| ||||||| Sbjct: 658 agcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaacccgggtgat 717 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 |||| |||| |||||||||||||||| | | || ||| ||||||||||||||| ||||| Sbjct: 718 ctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgt 777 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| |||| ||||||||| |||| |||||| ||||| ||| |||||| | |||||||| Sbjct: 778 tgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaactcggagctagc 837 Query: 234 tggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atctaggggtaaagc 291 ||| ||||||||||||||||||||||||||| || | ||| | |||| |||||||||| Sbjct: 838 tggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatcttggggtaaagc 897 Query: 292 -actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 350 ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| |||||| ||| Sbjct: 898 gactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactcagaatacaaga 957 Query: 351 tatg 354 |||| Sbjct: 958 tatg 961 Score = 165 bits (83), Expect = 2e-37 Identities = 188/223 (84%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||||||||| | || |||| ||||||| ||| | ||| | ||| |||||| Sbjct: 1033 taaggcccctaaatggtcactaagtggtaaaggatgtgagaatgctgaaacaaccaggaa 1092 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 ||| || |||||||||| ||| || ||||||||||||||||||||||| | |||| || Sbjct: 1093 gttcgcttagaagcagctacctttcaaagagtgcgtaatagctcactggtaaagcgttct 1152 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 605 ||||| || ||| |||| ||||| || |||||||||||||| Sbjct: 1153 tgcgccgataatggccgggactaagtgacctgccgaagctgtg 1195
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 244 bits (123), Expect = 3e-61 Identities = 186/207 (89%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||| ||||||||| |||||| | |||| |||||||||| ||||||| Sbjct: 479 tagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaacccgggtgat 538 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||| ||||||||| Sbjct: 539 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacggactgatgt 598 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| ||||||| |||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 599 tgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 658 Query: 234 tggttctccccgaaatgcgttgaggcg 260 |||||||||||||||| |||||||||| Sbjct: 659 tggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 346 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 244 bits (123), Expect = 3e-61 Identities = 186/207 (89%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||| ||||||||| |||||| | |||| |||||||||| ||||||| Sbjct: 479 tagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaacccgggtgat 538 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||| ||||||||| Sbjct: 539 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacggactgatgt 598 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| ||||||| |||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 599 tgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 658 Query: 234 tggttctccccgaaatgcgttgaggcg 260 |||||||||||||||| |||||||||| Sbjct: 659 tggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 346 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 244 bits (123), Expect = 3e-61 Identities = 186/207 (89%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||| ||||||||| |||||| | |||| |||||||||| ||||||| Sbjct: 479 tagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaacccgggtgat 538 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||| ||||||||| Sbjct: 539 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacggactgatgt 598 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| ||||||| |||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 599 tgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 658 Query: 234 tggttctccccgaaatgcgttgaggcg 260 |||||||||||||||| |||||||||| Sbjct: 659 tggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 346 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 244 bits (123), Expect = 3e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 972 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 1031 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 1032 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 1091 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1092 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 1151 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 605 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 1152 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 1194 Score = 220 bits (111), Expect = 4e-54 Identities = 186/211 (88%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||| ||||||||| |||| || |||||||||||||| ||||||| Sbjct: 657 tagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaacccgggtgat 716 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||||| | |||| ||| || | |||||||||| ||||| Sbjct: 717 ctaaccatggccaggatgaagcttgggtaaaacgaagtggaagaccgaaccgaccgatgt 776 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| |||| ||||||||| |||||||||||||||||| ||| |||||| | |||||||| Sbjct: 777 tgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggagctagc 836 Query: 234 tggttctccccgaaatgcgttgaggcgcagc 264 ||||||||||||||||||||||||||||||| Sbjct: 837 tggttctccccgaaatgcgttgaggcgcagc 867 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 278 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 337 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 884 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 943 Query: 338 tctgaatactaga 350 || |||||||||| Sbjct: 944 tcagaatactaga 956
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 244 bits (123), Expect = 3e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 2741 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 2800 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 2801 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 2860 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2861 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 2920 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 605 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 2921 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 2963 Score = 220 bits (111), Expect = 4e-54 Identities = 186/211 (88%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 113 |||||||||||||||| ||||||||| |||| || |||||||||||||| ||||||| Sbjct: 2426 tagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaacccgggtgat 2485 Query: 114 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 173 ||| ||||| |||||||||||||||| | |||| ||| || | |||||||||| ||||| Sbjct: 2486 ctaaccatggccaggatgaagcttgggtaaaacgaagtggaagaccgaaccgaccgatgt 2545 Query: 174 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 233 |||| |||| ||||||||| |||||||||||||||||| ||| |||||| | |||||||| Sbjct: 2546 tgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggagctagc 2605 Query: 234 tggttctccccgaaatgcgttgaggcgcagc 264 ||||||||||||||||||||||||||||||| Sbjct: 2606 tggttctccccgaaatgcgttgaggcgcagc 2636 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 278 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 337 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 2653 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 2712 Query: 338 tctgaatactaga 350 || |||||||||| Sbjct: 2713 tcagaatactaga 2725
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 235 ggttctccccgaaatgcgttgaggcg 260 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 184 bits (93), Expect = 2e-43 Identities = 180/209 (86%) Strand = Plus / Plus Query: 395 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 454 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 455 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 514 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 320614 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 320673 Query: 515 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 574 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 320674 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 320733 Query: 575 gaacggggctaagcgatctgccgaagctg 603 ||||||||||||||| | | ||||||||| Sbjct: 320734 gaacggggctaagcgttataccgaagctg 320762 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcga 330 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 235 ggttctccccgaaatgcgttgaggcg 260 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 176 bits (89), Expect = 6e-41 Identities = 179/209 (85%) Strand = Plus / Plus Query: 395 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 454 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2977 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3036 Query: 455 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 514 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 3037 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 3096 Query: 515 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 574 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 3097 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 3156 Query: 575 gaacggggctaagcgatctgccgaagctg 603 ||| ||||||||||| | | ||||||||| Sbjct: 3157 gaatggggctaagcgttataccgaagctg 3185 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcga 330 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 235 ggttctccccgaaatgcgttgaggcg 260 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 176 bits (89), Expect = 6e-41 Identities = 179/209 (85%) Strand = Plus / Plus Query: 395 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 454 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2978 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3037 Query: 455 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 514 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 3038 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 3097 Query: 515 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 574 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 3098 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 3157 Query: 575 gaacggggctaagcgatctgccgaagctg 603 ||| ||||||||||| | | ||||||||| Sbjct: 3158 gaatggggctaagcgttataccgaagctg 3186 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcga 330 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 1e-60 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 235 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 291 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 292 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 346 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 383 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 442 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 443 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 502 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 685 Query: 503 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 562 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 686 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 745 Query: 563 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 606 | ||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 746 t-cgccgaaaatgaacggggctaagttatctaccgaagctgtgg 788
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 242 bits (122), Expect = 1e-60 Identities = 252/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 58 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 117 |||| ||||||| || ||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 118 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 177 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 178 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 237 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 238 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 294 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctggggggtaaagcact 499 Query: 295 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 346 |||||||||||||||| | || ||||||||||||||| ||||||| |||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcagaatac 551 Score = 222 bits (112), Expect = 1e-54 Identities = 200/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagacaactagga 685 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 562 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 609 | ||| ||| |||||||||||||||| || | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcaatgtaccgaagctgtgggat 792
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 235 ggttctccccgaaatgcgttgaggcg 260 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 184 bits (93), Expect = 2e-43 Identities = 180/209 (86%) Strand = Plus / Minus Query: 395 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 454 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 19844 Query: 455 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 514 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 19843 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 19784 Query: 515 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 574 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 19783 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 19724 Query: 575 gaacggggctaagcgatctgccgaagctg 603 ||||||||||||||| | | ||||||||| Sbjct: 19723 gaacggggctaagcgttataccgaagctg 19695 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcga 330 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 235 ggttctccccgaaatgcgttgaggcg 260 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 184 bits (93), Expect = 2e-43 Identities = 180/209 (86%) Strand = Plus / Minus Query: 395 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 454 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 1657 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 1598 Query: 455 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 514 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 1597 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 1538 Query: 515 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 574 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 1537 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 1478 Query: 575 gaacggggctaagcgatctgccgaagctg 603 ||||||||||||||| | | ||||||||| Sbjct: 1477 gaacggggctaagcgttataccgaagctg 1449 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcga 330 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 235 ggttctccccgaaatgcgttgaggcg 260 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 176 bits (89), Expect = 6e-41 Identities = 179/209 (85%) Strand = Plus / Plus Query: 395 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 454 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 316043 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 316102 Query: 455 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 514 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 316103 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 316162 Query: 515 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 574 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 316163 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 316222 Query: 575 gaacggggctaagcgatctgccgaagctg 603 ||| ||||||||||| | | ||||||||| Sbjct: 316223 gaatggggctaagcgttataccgaagctg 316251 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 296 tttcggtgcgggctgcgcgagcggtaccaaatcga 330 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 242 bits (122), Expect = 1e-60 Identities = 265/307 (86%), Gaps = 8/307 (2%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaacctgggtg 111 ||||||||||||||| ||||||||| || |||||| |||||||||||||||| ||||| Sbjct: 654 agcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccgaacccgggtg 713 Query: 112 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 171 |||||| ||||||||||||||||||||| | | || ||| ||||||||||||||| ||| Sbjct: 714 atctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgat 773 Query: 172 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 231 |||||| |||| |||||||||||||| |||||| ||||| ||| |||||| | |||||| Sbjct: 774 gttgaaaaatcggcggatgagttgtgaataggggagaaattccaatcgaactcggagcta 833 Query: 232 gctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctaggggtaa 288 ||||| ||||||||||||||||||||||||||| || || || || |||| ||||||| Sbjct: 834 gctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttggggtaa 892 Query: 289 agc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 347 ||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| |||||| Sbjct: 893 agctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcagaataca 952 Query: 348 agatatg 354 ||||||| Sbjct: 953 agatatg 959 Score = 157 bits (79), Expect = 5e-35 Identities = 172/203 (84%) Strand = Plus / Plus Query: 403 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 462 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| | | Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatggtcac 2766 Query: 463 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 522 | |||| ||||||| ||| | ||| | ||| ||||||||||||| ||||||||||||| Sbjct: 2767 taagtggtaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccac 2826 Query: 523 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 582 |||| ||||||||||||||||||||||| | |||| ||||||| || ||| |||| Sbjct: 2827 ccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataatggccggga 2886 Query: 583 ctaagcgatctgccgaagctgtg 605 ||||| || |||||||||||||| Sbjct: 2887 ctaagtgacctgccgaagctgtg 2909
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1659136 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1659195 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1659196 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1659255 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1659256 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1659315 Query: 235 ggttctccccgaaatgcgttgaggcg 260 ||||||||||||||| |||||||||| Sbjct: 1659316 ggttctccccgaaatacgttgaggcg 1659341 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 55 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 114 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1049608 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1049549 Query: 115 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 174 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1049548 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1049489 Query: 175 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 234 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1049488 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1049429 Query: 235 ggttctccccgaaatgcgttgaggcg 260 ||||||||||||||| |||||||||| Sbjct: 1049428 ggttctccccgaaatacgttgaggcg 1049403 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1659503 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1659562 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1659563 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1659622 Query: 562 ttgcgctgaagatgaacggggctaag 587 ||||| ||| ||||||||||||||| Sbjct: 1659623 ctgcgccgaaaatgaacggggctaag 1659648 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Minus Query: 382 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 441 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 442 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 501 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1049241 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1049182 Query: 502 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 561 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1049181 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1049122 Query: 562 ttgcgctgaagatgaacggggctaag 587 ||||| ||| ||||||||||||||| Sbjct: 1049121 ctgcgccgaaaatgaacggggctaag 1049096 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 282 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 341 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 342 aatac 346 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 282 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 341 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 342 aatac 346 ||||| Sbjct: 1049320 aatac 1049316
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 242 bits (122), Expect = 1e-60 Identities = 264/308 (85%), Gaps = 10/308 (3%) Strand = Plus / Plus Query: 54 tagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacccgaacctgg 108 ||||||||||||||||||||||||||| | |||||| |||||||||||||| || Sbjct: 825 tagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacccgaacccgg 884 Query: 109 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 168 |||||||| ||||||||||||||||||||| | | || ||| ||||||||||||||| Sbjct: 885 gtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtccgaaccgacc 944 Query: 169 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 228 ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | ||| Sbjct: 945 gatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactcggag 1004 Query: 229 ctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggacatctagggg 285 |||||||| ||||||||||||||||||||||||||| | ||||| | |||||| || Sbjct: 1005 ctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagctatctagagg 1063 Query: 286 taaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 344 |||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| |||| Sbjct: 1064 taaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactcagaat 1123 Query: 345 actagata 352 |||||||| Sbjct: 1124 actagata 1131 Score = 137 bits (69), Expect = 5e-29 Identities = 159/189 (84%) Strand = Plus / Plus Query: 417 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 476 ||||||||||||||| ||||||||||||||||||||||||| | || |||| |||||| Sbjct: 1180 agagggaaacagcccagatcaccagctaaggcccctaaatggtcactaagtggaaaagga 1239 Query: 477 ggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgc 536 ||| | ||| | ||| ||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 1240 tgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccacccttgaaagagtgc 1299 Query: 537 gtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgcc 596 |||||||||||||| | |||| ||||||| || ||| |||| ||||| || ||||| Sbjct: 1300 gtaatagctcactggtaaagcgttcttgcgccgacaatggccgggactaagtgacctgcc 1359 Query: 597 gaagctgtg 605 ||||||||| Sbjct: 1360 gaagctgtg 1368 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,755,579 Number of Sequences: 3902068 Number of extensions: 3755579 Number of successful extensions: 71877 Number of sequences better than 10.0: 2899 Number of HSP's better than 10.0 without gapping: 2932 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 53948 Number of HSP's gapped (non-prelim): 16919 length of query: 627 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 604 effective length of database: 17,143,297,704 effective search space: 10354551813216 effective search space used: 10354551813216 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
