ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd24o13 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 Score = 1098 bits (554), Expect = 0.0 Identities = 618/638 (96%), Gaps = 1/638 (0%) Strand = Plus / Plus Query: 10 tagtacagctatggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttcc 69 ||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct: 77 tagtacagcgatggcccctaccgtg-atggcctcgtcggccacctccgtcgctcctttcc 135 Query: 70 aggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcg 129 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 136 aggggctcaagtccaccgccggcctccccgtcagccgccgctccaacggcgctagcctcg 195 Query: 130 gcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatca 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 gcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatca 255 Query: 190 agaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcagg 249 ||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||| Sbjct: 256 agaagttcgagaccctgtcttacttgccaccgctcaccacggaggccctcctcaagcagg 315 Query: 250 tcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttca 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 316 tcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttca 375 Query: 310 tcttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtgga 369 ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 376 tcttccgtgagcacaacgcgtctcccgggtactacgatggccggtactggacaatgtgga 435 Query: 370 agctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtca 429 |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 436 agctgcctatgttcgggtgcaccgacgccacacaggtgatcaacgaggtggaggaggtca 495 Query: 430 agaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgc 489 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 496 agaaggagtaccctgacgcgtacgtccgcatcatcggattcgacaacatgcgccaggtgc 555 Query: 490 agtgcgtcagcttcatcgccttcaagccaccaggctgcgaggagtccggcaaggcataaa 549 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 556 agtgcgtcagcttcatcgccttcaagccaccgggctgcgaggagtccggcaaggcataaa 615 Query: 550 cagctcactgacgatgggccacatataaagtgccattgcagttttgtcaactctgacatt 609 ||||||||| || | ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 616 cagctcactcaccacgggccgcatataaagtgccattgcagttttgtcaactctgacatt 675 Query: 610 gctttgggttttccttctccatttatctttcttatttg 647 |||||||||||||||| ||||||||||||||||||||| Sbjct: 676 gctttgggttttccttgtccatttatctttcttatttg 713
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 Score = 1013 bits (511), Expect = 0.0 Identities = 617/640 (96%), Gaps = 13/640 (2%) Strand = Plus / Plus Query: 7 acatagtacagctatggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctt 66 |||||||||||| ||||||||||||||| |||||||| ||||| |||||||||||||||| Sbjct: 11 acatagtacagccatggcccccaccgtg-atggcctcatcggcaacctccgtcgctcctt 69 Query: 67 tccaggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcc 126 |||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||| Sbjct: 70 tccaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacg---ctagc- 125 Query: 127 tcggc-agcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggc 185 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 tcggccagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggc 185 Query: 186 atcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaag 245 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 186 atcaagaagttcgagaccctgtcttaccttccaccactcagcacggaggccctccttaag 245 Query: 246 caggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttggg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 caggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttggg 305 Query: 306 ttcatcttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 ttcatcttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatg 365 Query: 366 tggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggag 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 tggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggag 425 Query: 426 gtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 gtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcag 485 Query: 486 gtgcagtgcgtcagcttcatcgccttcaagccaccaggctgcgaggagtccggcaaggca 545 ||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||| Sbjct: 486 gtgcagtgcgtcagcttcatcgctttcaagccaccaggctgccaggagtcgggcaaggca 545 Query: 546 taaacagctcactgacgatgggccacatataaagtgccattgcagttttgtcaactctga 605 |||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||| Sbjct: 546 taaacagctcactgacgatggg-cacatat-aagtgccattgcag-tttgtcaactctga 602 Query: 606 cattgctttgggttttccttctccatttatctttcttatt 645 || ||||| ||||||||||||||| |||||||||||||| Sbjct: 603 ca-tgctt--ggttttccttctcca-ttatctttcttatt 638
>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase, small subunit Length = 837 Score = 948 bits (478), Expect = 0.0 Identities = 604/642 (94%), Gaps = 3/642 (0%) Strand = Plus / Plus Query: 7 acatagtacagctatggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctt 66 |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 34 acatagtacagccatggcccccaccgtg-atggcctcgtcggccacctccgtcgctcctt 92 Query: 67 tccaggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcc 126 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 93 tccaggggctcaagtccaccgccggcctccccgtcagccgccgctccaacggcgctagcc 152 Query: 127 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggca 186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 153 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggta 212 Query: 187 tcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagc 246 |||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||| Sbjct: 213 tcaagaagttcgagaccctgtcctacttgccaccgctcagcacggagggcctccttaagc 272 Query: 247 aggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggt 306 |||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||| Sbjct: 273 aggtcgactacctgatccgctccaagtgggtgccctgcctcgagtttagaaaggttgggt 332 Query: 307 tcatcttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgt 366 ||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 333 tcatcttccgtgaacacaacgtatcccctgggtactacgatggccggtactggacaatgt 392 Query: 367 ggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggagg 426 |||| || ||||||||||||||| ||| | |||| |||||| || |||||||||||||| Sbjct: 393 ggaaactccctatgttcggatgccccgcccccacccaggtgatccccgaggtggaggagg 452 Query: 427 tcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcagg 486 ||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||||| Sbjct: 453 tcaggaaggagtaccctgacccctattgccgcatcatcggattcgacaacatgcgtcagg 512 Query: 487 tgcagtgcgtcagcttcatcgccttcaagccaccaggctgcgaggagtccggcaaggcat 546 |||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||| | Sbjct: 513 tgcagtccgtcagcttcatcgcctccaagccaccgggctgcgaggagtccggcaaggcct 572 Query: 547 aaacagctcactgacgatgggcc-acatataaagtgccattgcagttttgtcaactctga 605 |||||||||||| |||| |||| | ||| |||||||||||||||||||||||||||||| Sbjct: 573 aaacagctcactcacgacaggcctatata-aaagtgccattgcagttttgtcaactctga 631 Query: 606 cattgctttgggttttccttctccatttatctttcttatttg 647 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 cattgctttgggttttccttctccatttatctttcttatttg 673
>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p9-1 Length = 739 Score = 694 bits (350), Expect = 0.0 Identities = 374/382 (97%) Strand = Plus / Plus Query: 163 tgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccac 222 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 354 tgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacctgccaccgc 413 Query: 223 tcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgcctt 282 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 414 tcagcacggaggccctcctcaagcaggtcgactacctgatccgctccaagtgggtgcctt 473 Query: 283 gcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtact 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 gcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtact 533 Query: 343 acgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacac 402 ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 534 acgatggccggtattggacaatgtggaagctgcctatgttcgggtgcactgacgccacac 593 Query: 403 aggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatca 462 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 594 aggtgatcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatca 653 Query: 463 tcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccag 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 654 tcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccgg 713 Query: 523 gctgcgaggagtccggcaaggc 544 |||||||||||||||||||||| Sbjct: 714 gctgcgaggagtccggcaaggc 735 Score = 258 bits (130), Expect = 2e-65 Identities = 146/150 (97%), Gaps = 1/150 (0%) Strand = Plus / Plus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atggcccccgccgtg-atggcctcgtcggccacctccgtcgctcctttccaggggctcaa 59 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 60 gtccaccgccggcctccccgtcagccgccgctccaacggcgctagcctcggcagcgtcag 119 Query: 140 caacggtggaaggatcaggtgcatgcaggt 169 |||||||||||||||||||||||||||||| Sbjct: 120 caacggtggaaggatcaggtgcatgcaggt 149
>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39) (ribulosebisphosphate carboxylase, clone 512) Length = 611 Score = 690 bits (348), Expect = 0.0 Identities = 414/436 (94%) Strand = Plus / Plus Query: 208 cttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgct 267 ||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 2 cttacctgccaccgctcagcacggaggccctcctcaagcaggtggactacctgatccgct 61 Query: 268 ccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacg 327 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| | Sbjct: 62 ccaagtgggtgccttgccttgagttcagcaaggtcgggttcatcttccgtgagcacaatg 121 Query: 328 catctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggat 387 | ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| | Sbjct: 122 cgtctcccgggtactacgacggccgctactggacaatgtggaagctgcctatgttcgggt 181 Query: 388 gcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacg 447 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gcaccgacgccacacaggtgatcaacgaggtggaggaggtcaagaaggagtaccctgacg 241 Query: 448 cgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcg 507 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 242 cgtacgtccgcatcatcggattcgacaacatgcgccaggtgcagtgcgtcagcttcattg 301 Query: 508 ccttcaagccaccaggctgcgaggagtccggcaaggcataaacagctcactgacgatggg 567 ||||||||||||| ||||||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 302 ccttcaagccaccgggctgcgaggagtccggcaaggcctaaacagctcactcaccacggg 361 Query: 568 ccacatataaagtgccattgcagttttgtcaactctgacattgctttgggttttccttct 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 ccacatataaagtgccattgcagttttgtcaactctgacattgctttgggttttccttct 421 Query: 628 ccatttatctttctta 643 |||||| ||||||||| Sbjct: 422 ccatttgtctttctta 437
>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 Score = 656 bits (331), Expect = 0.0 Identities = 468/514 (91%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| ||||| |||||| ||||||| || ||||||||||||||||| |||||||||||| Sbjct: 83 atggcttcgtccgccaccaccgtcgcgcccttccaggggctcaagtcgaccgccggcctc 142 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 |||||| |||||||||| | | || ||||| |||||||||||||||| ||||||||| Sbjct: 143 cccgtcggccgccgctccggcagcgccggcctcagcagcgtcagcaacggcggaaggatc 202 Query: 156 aggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttg 215 || ||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 203 agatgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttg 262 Query: 216 ccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgg 275 ||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 263 ccacccctctccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgg 322 Query: 276 gtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcct 335 ||||| ||||||||||||||||||||||| ||| ||||||||||||||||| || || Sbjct: 323 gtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcacaacaactccccc 382 Query: 336 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| || || |||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 383 gggtactacgacggtcgatactggacaatgtggaagttgcctatgttcgggtgcaccgac 442 Query: 396 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 455 ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 443 gccacgcaggtgctcaatgaggtggaggaggtcaagaaggagtaccctgacgcctatgtc 502 Query: 456 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 515 ||| ||||||| |||||||||||||| ||||||||||||||||||||||| ||||||| | Sbjct: 503 cgcgtcatcggcttcgacaacatgcgccaggtgcagtgcgtcagcttcattgccttcagg 562 Query: 516 ccaccaggctgcgaggagtccggcaaggcataaa 549 |||||| |||||||||| |||||||||||||||| Sbjct: 563 ccaccangctgcgaggaatccggcaaggcataaa 596
>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p2-1 Length = 653 Score = 654 bits (330), Expect = 0.0 Identities = 369/382 (96%) Strand = Plus / Plus Query: 163 tgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccac 222 ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||| | Sbjct: 268 tgcaggtgtggcccatcgagggcattaagaagttcgagaccctgtcctacctgccaccgc 327 Query: 223 tcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgcctt 282 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 328 tcagcacagaggccctcctcaagcaggtcgactacctgatccgctccaagtgggtgcctt 387 Query: 283 gcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtact 342 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 388 gcctcgagttcagcaaggttgggtttatcttccgtgagcacaacgcatcccctgggtact 447 Query: 343 acgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacac 402 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 448 acgatggccggtactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgc 507 Query: 403 aggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatca 462 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 508 aggtgatcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatca 567 Query: 463 tcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccag 522 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 568 tcggattcgacaacatgcgccaggtgcagtgcgtcagcttcatcgccttcaagccaccgg 627 Query: 523 gctgcgaggagtccggcaaggc 544 |||||||||||||||||||||| Sbjct: 628 gctgcgaggagtccggcaaggc 649 Score = 250 bits (126), Expect = 5e-63 Identities = 145/150 (96%), Gaps = 1/150 (0%) Strand = Plus / Plus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atggcccccgccgtg-atggcctcgtcggccacctccgtcgctcctttccaggggctcaa 59 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 60 gtccaccgccggcctccccgtcagccgccgctccaacggcgctagcctcggcagcgtcag 119 Query: 140 caacggtggaaggatcaggtgcatgcaggt 169 ||||||||||||||||||| |||||||||| Sbjct: 120 caacggtggaaggatcaggcgcatgcaggt 149
>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small subunit (rbcS gene) Length = 518 Score = 628 bits (317), Expect = e-177 Identities = 461/509 (90%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||||||||||||||| || |||||||| |||||||| |||| |||||| Sbjct: 6 atggcttcctcggccacctccgtcgcacccttccagggtctcaagtcgaccgacggcctg 65 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||| ||||||||||||| | | | || ||||| |||||||||||||||| ||||||||| Sbjct: 66 cccatcagccgccgctccagcagcgccggcctcagcagcgtcagcaacggcggaaggatc 125 Query: 156 aggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttg 215 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| || Sbjct: 126 aggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacctg 185 Query: 216 ccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgg 275 ||||| ||| ||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 186 ccacccctctccacggaggccctcctgaagcaggtcgactacttgatccgctccaagtgg 245 Query: 276 gtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcct 335 ||||| ||||||||||||||||||||||| ||| |||||||||||||||| || || Sbjct: 246 gtgccctgcctcgagttcagcaaggttggtttcgtcttccgtgagcacaatagctccccc 305 Query: 336 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 || ||||| || || || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 306 ggatactatgacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgac 365 Query: 396 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 455 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 366 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtc 425 Query: 456 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 515 ||| ||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| | Sbjct: 426 cgcgtcatcggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcagg 485 Query: 516 ccaccaggctgcgaggagtccggcaaggc 544 ||||| || |||||||||||||||||||| Sbjct: 486 ccaccgggttgcgaggagtccggcaaggc 514
>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, complete cds Length = 779 Score = 613 bits (309), Expect = e-172 Identities = 450/497 (90%) Strand = Plus / Plus Query: 48 gccacctccgtcgctcctttccaggggctcaagtccaccgccggcctccccgtcagccgc 107 |||||| ||||||| || ||||||||||||||||| ||||||||||||||| ||||| || Sbjct: 85 gccaccaccgtcgcgcccttccaggggctcaagtcgaccgccggcctccccatcagctgc 144 Query: 108 cgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcag 167 ||||| | | | ||||| ||||||||||||| || ||||||||||| ||||||||| Sbjct: 145 cgctccggcagcaccggcctcagcagcgtcagcaatggcggaaggatcagatgcatgcag 204 Query: 168 gtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactcagc 227 |||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 205 gtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctctcc 264 Query: 228 acggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcctc 287 |||||||||||| | ||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 265 acggaggccctcttgaagcaggtcgactacttgatccgctccaagtgggtgccctgcctc 324 Query: 288 gagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacgat 347 ||||||||||||||||| ||| ||||||||||||||||| || || ||||||||||| Sbjct: 325 gagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactacgac 384 Query: 348 ggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtg 407 || || |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 385 ggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacaggtg 444 Query: 408 ctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcgga 467 |||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||| Sbjct: 445 ctcaacgaggtggaggaggttaagaaggagtaccctgatgcgtatgtccgcgtcatcggt 504 Query: 468 ttcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggctgc 527 |||||||||||||| |||||||| |||||||||||||| ||||||| ||||||||||||| Sbjct: 505 ttcgacaacatgcgccaggtgcaatgcgtcagcttcattgccttcaggccaccaggctgc 564 Query: 528 gaggagtccggcaaggc 544 ||||| ||||||||||| Sbjct: 565 gaggaatccggcaaggc 581
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 555 bits (280), Expect = e-155 Identities = 446/498 (89%), Gaps = 5/498 (1%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||||||||||||||| || |||||||| |||||||||||||| |||||| Sbjct: 4 atggcttcttcggccacctccgtcgcgcccttccagggcctcaagtccaccgctggcctc 63 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||| || ||| |||||||||||||||||||||| ||||||||| Sbjct: 64 cccgtcagccgccgcagcaa---tgccggcctcggcagcgtcagcaacggcggaaggatc 120 Query: 156 aggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttg 215 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| || Sbjct: 121 aggtgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctg 180 Query: 216 ccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgg 275 |||||||| |||||||||||| |||||| |||||| | ||||||||||||||||| Sbjct: 181 ccaccactgtcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgg 240 Query: 276 gtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcc 334 || || ||||||||||||||||||||||| ||||||||||| |||||| | ||| |||| Sbjct: 241 gttccctgcctcgagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctcc 299 Query: 335 tgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccga 394 || |||||||| ||| ||||||||||||||||||||||||| |||||||| ||||| || Sbjct: 300 cggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcactga 359 Query: 395 cgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgt 454 |||| |||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 360 cgcctcacaggtgatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgt 419 Query: 455 ccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaa 514 ||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||| Sbjct: 420 tcgcatcatcggcttcgacaacatccgtcaagtgcagtgcgtcagcttcatcgcattcaa 479 Query: 515 gccaccaggctgcgagga 532 |||||||||||||||||| Sbjct: 480 gccaccaggctgcgagga 497
>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 539 bits (272), Expect = e-150 Identities = 435/486 (89%), Gaps = 5/486 (1%) Strand = Plus / Plus Query: 48 gccacctccgtcgctcctttccaggggctcaagtccaccgccggcctccccgtcagccgc 107 |||||||||||||| || |||||||| |||||||||||||| |||||||||||||||||| Sbjct: 16 gccacctccgtcgcgcccttccagggcctcaagtccaccgctggcctccccgtcagccgc 75 Query: 108 cgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcag 167 ||| || ||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 76 cgcagcaa---tgccggcctcggcagcgtcagcaacggcggaaggatcaggtgcatgcag 132 Query: 168 gtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactcagc 227 |||||||| || ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 133 gtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccaccactgtca 192 Query: 228 acggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcctc 287 |||||||||||| |||||| |||||| | ||||||||||||||||||| || |||||| Sbjct: 193 gaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgggttccctgcctc 252 Query: 288 gagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtactacga 346 ||||||||||||||||| ||||||||||| |||||| | ||| |||| || |||||||| Sbjct: 253 gagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctcccggatactacga 311 Query: 347 tggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggt 406 ||| ||||||||||||||||||||||||| |||||||| ||||| |||||| ||||||| Sbjct: 312 cggcaggtactggacaatgtggaagctgcccatgttcggctgcactgacgcctcacaggt 371 Query: 407 gctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcgg 466 | ||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 372 gatcagggaggtggaggaggtcaagaaggagtaccctgacgcctatgttcgcatcatcgg 431 Query: 467 attcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggctg 526 ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 432 cttcgacaacatccgtcaagtgcagtgcgtcagcttcatcgcattcaagccaccaggctg 491 Query: 527 cgagga 532 |||||| Sbjct: 492 cgagga 497
>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 539 bits (272), Expect = e-150 Identities = 444/498 (89%), Gaps = 5/498 (1%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || |||||||||||||| || || |||||||| |||||||||||||| |||||| Sbjct: 4 atggcttcttcggccacctccgttgcgcccttccagggcctcaagtccaccgctggcctc 63 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||| || ||| |||||||||||||||||||||| ||||||||| Sbjct: 64 cccgtcagccgccgcagcaa---tgccggcctcggcagcgtcagcaacggcggaaggatc 120 Query: 156 aggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttg 215 |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| Sbjct: 121 aggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctttcttacttg 180 Query: 216 ccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgg 275 ||||||||| |||||||||||| |||||| |||||| | ||||||||||||||||| Sbjct: 181 ccaccactctcggaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgg 240 Query: 276 gtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcc 334 || || ||||| ||||||||||||||||| ||||||||||| |||||| | ||| |||| Sbjct: 241 gttccctgcctggagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctcc 299 Query: 335 tgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccga 394 || |||||||| ||| ||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 300 cggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccga 359 Query: 395 cgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgt 454 |||| ||||||| |||| ||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 360 cgcctcacaggtcatcaaggaggtggaggaggtcaagaagaagtaccctgacgcctatgt 419 Query: 455 ccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaa 514 ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 420 tcgcatcatcggcttcgtcaacatccgtcaggtgcagtgcgtcagcttcatcgccttcaa 479 Query: 515 gccaccaggctgcgagga 532 |||||| ||||||||||| Sbjct: 480 gccaccgggctgcgagga 497
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 504 Score = 539 bits (272), Expect = e-150 Identities = 444/498 (89%), Gaps = 5/498 (1%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||||||||| ||||| || |||||||||||||||||||| || ||||| Sbjct: 4 atggcttcgtcggccacctcggtcgcgcccttccaggggctcaagtccactgctggcctt 63 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||| |||| | |||| ||||||||||||||||||||||| ||| Sbjct: 64 cccgtcagccgccgcagcaacgccg---gccttggcagcgtcagcaacggtggaagaatc 120 Query: 156 aggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttg 215 | ||||||||||||||||| || ||||||||||||||||||||||||||||||||| || Sbjct: 121 cgatgcatgcaggtgtggcctattgagggcatcaagaagttcgagaccctgtcttacctg 180 Query: 216 ccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgg 275 |||||||||| |||||||||||| |||||| |||||| | ||||||||||||||||| Sbjct: 181 ccaccactcacagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgg 240 Query: 276 gtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcc 334 || |||||||||||||||||| | | ||| ||||||||||| |||||| | ||| |||| Sbjct: 241 gttccttgcctcgagttcagccaaggtggcttcatcttccgcgagcacggcagca-ctcc 299 Query: 335 tgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccga 394 ||| ||||| || ||| |||||||||||||||||||||| || ||||||||||||||||| Sbjct: 300 tggatactatgacggcaggtactggacaatgtggaagctccccatgttcggatgcaccga 359 Query: 395 cgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgt 454 |||| | |||||| |||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 360 cgcctcccaggtgatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgt 419 Query: 455 ccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaa 514 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 420 ccgcatcatcggcttcgacaacatccgtcaggtgcagtgcgtcagcttcatcgccttcaa 479 Query: 515 gccaccaggctgcgagga 532 |||||| ||||||||||| Sbjct: 480 gccaccgggctgcgagga 497
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 531 bits (268), Expect = e-148 Identities = 443/498 (88%), Gaps = 5/498 (1%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||||||||| ||||| || ||||||| |||||||||||| || ||||| Sbjct: 4 atggcttcttcggccacctcggtcgcgcccttccaggagctcaagtccactgctggcctt 63 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||| |||| | |||| ||||||||||||||||||||||| ||| Sbjct: 64 cccgtcagccgccgcagcaacgccg---gccttggcagcgtcagcaacggtggaagaatc 120 Query: 156 aggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttg 215 | ||||||||||||||||| || ||||||||||||||||||||||||||||||||| || Sbjct: 121 cgatgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacctg 180 Query: 216 ccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgg 275 ||||||||| |||||||||||| |||||| |||||| | ||||||||||||||||| Sbjct: 181 ccaccactctcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgg 240 Query: 276 gtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcc 334 || || ||||| ||||||||||||||||| ||||||||||| |||||| | ||| |||| Sbjct: 241 gttccctgcctggagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctcc 299 Query: 335 tgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccga 394 || |||||||| ||| ||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 300 cggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccga 359 Query: 395 cgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgt 454 |||| |||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 360 cgcctcacaggtgatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgt 419 Query: 455 ccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaa 514 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 420 ccgcatcatcggcttcgacaacatccgtcaggtgcagtgcgtcagcttcatcgccttcaa 479 Query: 515 gccaccaggctgcgagga 532 |||||| ||||||||||| Sbjct: 480 gccaccgggctgcgagga 497
>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 531 bits (268), Expect = e-148 Identities = 434/486 (89%), Gaps = 5/486 (1%) Strand = Plus / Plus Query: 48 gccacctccgtcgctcctttccaggggctcaagtccaccgccggcctccccgtcagccgc 107 ||||||||||| || || |||||||| |||||||||||||| |||||||||||||||||| Sbjct: 16 gccacctccgttgcgcccttccagggcctcaagtccaccgctggcctccccgtcagccgc 75 Query: 108 cgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcag 167 ||| || ||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 76 cgcagcaa---tgccggcctcggcagcgtcagcaacggcggaaggatcaggtgcatgcag 132 Query: 168 gtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactcagc 227 |||||||| || |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 133 gtgtggccgattgagggcatcaagaagttcgagaccctttcttacttgccaccactctcg 192 Query: 228 acggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcctc 287 |||||||||||| |||||| |||||| | ||||||||||||||||||| || ||||| Sbjct: 193 gaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgggttccctgcctg 252 Query: 288 gagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtactacga 346 ||||||||||||||||| ||||||||||| |||||| | ||| |||| || |||||||| Sbjct: 253 gagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctcccggatactacga 311 Query: 347 tggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggt 406 ||| ||||||||||||||||||||||||| |||||||| |||||||||||| ||||||| Sbjct: 312 cggcaggtactggacaatgtggaagctgcccatgttcggctgcaccgacgcctcacaggt 371 Query: 407 gctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcgg 466 |||| ||||||||||||||||||||| ||||||||||||| ||||| ||||||||||| Sbjct: 372 catcaaggaggtggaggaggtcaagaagaagtaccctgacgcctatgttcgcatcatcgg 431 Query: 467 attcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggctg 526 |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 432 cttcgtcaacatccgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccgggctg 491 Query: 527 cgagga 532 |||||| Sbjct: 492 cgagga 497
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 531 bits (268), Expect = e-148 Identities = 443/498 (88%), Gaps = 5/498 (1%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||||||||| ||||| || |||||||||||||||||||| || ||||| Sbjct: 4 atggcttcttcggccacctcggtcgcgcccttccaggggctcaagtccactgctggcctt 63 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||| |||| | |||| ||||||||||||||||||||||| ||| Sbjct: 64 cccgtcagccgccgcagcaacgccg---gccttggcagcgtcagcaacggtggaagaatc 120 Query: 156 aggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttg 215 | ||||||||||||||||| || ||||||||||||||||||||||||||||||||| || Sbjct: 121 cgatgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacctg 180 Query: 216 ccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgg 275 ||||||||| |||||||||||| |||||| |||||| | ||||||||||||||||| Sbjct: 181 ccaccactctcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgg 240 Query: 276 gtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcc 334 || || ||||| ||||||||||||||||| ||||||||||| ||| || | ||| |||| Sbjct: 241 gttccctgcctggagttcagcaaggttggcttcatcttccgcgagtacggcagca-ctcc 299 Query: 335 tgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccga 394 || |||||||| ||| ||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 300 cggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccga 359 Query: 395 cgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgt 454 |||| |||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 360 cgcctcacaggtgatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgt 419 Query: 455 ccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaa 514 |||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 420 ccgcatcatcggcttcgacaacatccgtcaggtgcagtgtgtcagcttcatcgccttcaa 479 Query: 515 gccaccaggctgcgagga 532 |||||||||||||||||| Sbjct: 480 gccaccaggctgcgagga 497
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 531 bits (268), Expect = e-148 Identities = 443/498 (88%), Gaps = 5/498 (1%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || |||||||||||||| || || |||||||| |||||||||||||| |||||| Sbjct: 4 atggcttcttcggccacctccgttgcgcccttccagggcctcaagtccaccgctggcctc 63 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||| || ||| |||||||||||||||||||||| ||||||||| Sbjct: 64 cccgtcagccgccgcagcaa---tgccggcctcggcagcgtcagcaacggcggaaggatc 120 Query: 156 aggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttg 215 |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| Sbjct: 121 aggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctttcttacttg 180 Query: 216 ccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgg 275 ||||||||| |||||||||||| |||||| |||||| | ||||||||||||||||| Sbjct: 181 ccaccactctcggaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgg 240 Query: 276 gtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcc 334 || || ||||| ||||||||||||||||| ||||||||||| |||||| | ||| |||| Sbjct: 241 gttccctgcctggagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctcc 299 Query: 335 tgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccga 394 || |||||||| ||| ||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 300 cggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccga 359 Query: 395 cgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgt 454 |||| ||||||| |||| ||||||||||| ||||||||| ||||||||||||| ||||| Sbjct: 360 cgcctcacaggtcatcaaggaggtggaggacgtcaagaagaagtaccctgacgcctatgt 419 Query: 455 ccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaa 514 ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 420 tcgcatcatcggcttcgtcaacatccgtcaggtgcagtgcgtcagcttcatcgccttcaa 479 Query: 515 gccaccaggctgcgagga 532 |||||| ||||||||||| Sbjct: 480 gccaccgggctgcgagga 497
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 Score = 527 bits (266), Expect = e-146 Identities = 356/386 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 1126 caggtgtggccaattgagggcatcaagaagtttgagaccctgtcttacttgccacccctc 1185 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 |||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1186 tccacggaagccctctcgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 1245 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 1246 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 1305 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1306 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 1365 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 1366 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 1425 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 1426 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 1485 Query: 525 tgcgaggagtccggcaaggcataaac 550 |||||||||||||||||||| ||||| Sbjct: 1486 tgcgaggagtccggcaaggcctaaac 1511 Score = 149 bits (75), Expect = 1e-32 Identities = 134/150 (89%), Gaps = 4/150 (2%) Strand = Plus / Plus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||||||| ||||| ||||| |||||||| ||| ||||||| || |||||||| ||||| Sbjct: 696 atggcccccgccgtg-atggcttcgtcggctaccaccgtcgcacccttccagggtctcaa 754 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 |||||| |||||||| ||||||||||||||||| | || || ||||||||||||||||| Sbjct: 755 gtccacagccggcctgcccgtcagccgccgctcca--ggggc-agcctcggcagcgtcag 811 Query: 140 caacggtggaaggatcaggtgcatgcaggt 169 |||||| ||||||||||||||||||||||| Sbjct: 812 caacggcggaaggatcaggtgcatgcaggt 841
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 525 bits (265), Expect = e-146 Identities = 440/495 (88%), Gaps = 5/495 (1%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||||||||| ||||| || ||||||| |||||||||||| || ||||| Sbjct: 4 atggcttcttcggccacctcggtcgcgcccttccaggagctcaagtccactgctggcctt 63 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||| |||| | |||| ||||||||||||||||||||||| ||| Sbjct: 64 cccgtcagccgccgcagcaacgccg---gccttggcagcgtcagcaacggtggaagaatc 120 Query: 156 aggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttg 215 | ||||||||||||||||| || ||||||||||||||||||||||||||||||||| || Sbjct: 121 cgatgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacctg 180 Query: 216 ccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgg 275 ||||||||| |||||||||||| |||||| |||||| | ||||||||||||||||| Sbjct: 181 ccaccactctcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgg 240 Query: 276 gtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcc 334 || || ||||| ||||||||||||||||| ||||||||||| |||||| | ||| |||| Sbjct: 241 gttccctgcctggagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctcc 299 Query: 335 tgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccga 394 || |||||||| ||| ||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 300 cggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccga 359 Query: 395 cgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgt 454 |||| |||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 360 cgcctcacaggtgatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgt 419 Query: 455 ccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaa 514 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 420 ccgcatcatcggcttcgacaacatccgtcaggtgcagtgcgtcagcttcatcgccttcaa 479 Query: 515 gccaccaggctgcga 529 |||||| |||||||| Sbjct: 480 gccaccgggctgcga 494
>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase Small subunit, complete cds, clone:p6-1 Length = 638 Score = 525 bits (265), Expect = e-146 Identities = 354/381 (92%), Gaps = 2/381 (0%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 255 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 314 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 315 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 374 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 343 |||||||||||||||||||| ||| ||||||||||||||||| || |||| |||||||| Sbjct: 375 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcctcc-gggtacta 433 Query: 344 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 403 ||| || || |||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 434 cgacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgca 493 Query: 404 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 463 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 494 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcat 553 Query: 464 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 523 ||| ||||||||| |||| |||||||||||||||||||||||||| |||| |||||| || Sbjct: 554 cggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgcattcaggccaccggg 613 Query: 524 ctgcgaggagtccggcaaggc 544 |||||||||||||||||||| Sbjct: 614 ttgcgaggagtccggcaaggc 634 Score = 143 bits (72), Expect = 8e-31 Identities = 132/150 (88%), Gaps = 4/150 (2%) Strand = Plus / Plus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||||||| ||||| ||||| |||||||| ||| ||||||| || |||||||||||||| Sbjct: 1 atggcccccgccgtg-atggcttcgtcggctaccaccgtcgcacccttccaggggctcaa 59 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 |||||| ||||| |||||||||||||||||||| | ||| ||||||||| ||||||| Sbjct: 60 gtccacagccggtctccccgtcagccgccgctccagcgg---cagcctcggccgcgtcag 116 Query: 140 caacggtggaaggatcaggtgcatgcaggt 169 ||| || ||||||||||||||||||||||| Sbjct: 117 caatggcggaaggatcaggtgcatgcaggt 146
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 523 bits (264), Expect = e-145 Identities = 442/498 (88%), Gaps = 5/498 (1%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| ||||| |||||| ||||||| || |||||||| |||||||||||||| |||||| Sbjct: 4 atggcttcgtccgccaccaccgtcgcaccattccagggcctcaagtccaccgctggcctc 63 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||| | | || ||||||||||||||||||||||||||||| ||| Sbjct: 64 cccgtcagccgccgc---agctccgccagcctcggcagcgtcagcaacggtggaagaatc 120 Query: 156 aggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttg 215 || ||||||||||||||||| || |||||||||||||||||||||||||| |||||| || Sbjct: 121 agatgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctttcttacctg 180 Query: 216 ccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgg 275 ||||||||| |||||||||||| |||||| |||||| | ||||||||||||||||| Sbjct: 181 ccaccactctcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgg 240 Query: 276 gtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcc 334 || || ||||| ||||||||||||||||| ||||||||||| |||||| | ||| | || Sbjct: 241 gttccctgccttgagttcagcaaggttggcttcatcttccgcgagcacggcagcaccccc 300 Query: 335 tgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccga 394 || |||||||| ||| ||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 301 -ggatactacgacggcaggtactggacaatgtggaagctgcccatgttcgggtgcaccga 359 Query: 395 cgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgt 454 |||| ||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 360 cgcctcacaggtcatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgt 419 Query: 455 ccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaa 514 |||||||||||| ||||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct: 420 ccgcatcatcggcttcgacaacatccgtcaagtgcagtgtgtcagcttcatcgccttcaa 479 Query: 515 gccaccaggctgcgagga 532 |||||| ||||||||||| Sbjct: 480 gccaccgggctgcgagga 497
>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Agr-A Length = 604 Score = 523 bits (264), Expect = e-145 Identities = 342/368 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 356 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 416 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || ||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 417 gacggccgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 477 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 536 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 537 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 596 Query: 525 tgcgagga 532 |||||||| Sbjct: 597 tgcgagga 604 Score = 127 bits (64), Expect = 5e-26 Identities = 117/134 (87%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 5 atggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctg 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| |||||||||||||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 Score = 521 bits (263), Expect = e-145 Identities = 358/387 (92%), Gaps = 2/387 (0%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 880 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 939 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 940 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 999 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 343 |||||||||||||||||||| ||| ||||||||||||||||| || |||| |||||||| Sbjct: 1000 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcctcc-gggtacta 1058 Query: 344 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 403 ||| || || |||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 1059 cgacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgca 1118 Query: 404 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 463 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 1119 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcat 1178 Query: 464 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 523 ||| ||||||||| |||| |||||||||||||||||||||||||| |||| |||||| || Sbjct: 1179 cggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgcattcaggccaccggg 1238 Query: 524 ctgcgaggagtccggcaaggcataaac 550 ||||||||||| |||||||| ||||| Sbjct: 1239 ttgcgaggagtctggcaaggcctaaac 1265 Score = 335 bits (169), Expect = 1e-88 Identities = 295/337 (87%) Strand = Plus / Plus Query: 177 atcgagggcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggcc 236 ||||||||||| |||||||| ||||||||||||||||||||||| ||| || |||||| Sbjct: 5296 atcgagggcatgaagaagtttgagaccctgtcttacttgccacccctctccatagaggcc 5355 Query: 237 ctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagc 296 ||||||| ||||||| |||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 5356 ctccttacgcaggtcaactacctgatccgctccaagtgggtgccctgcctcgacttcagc 5415 Query: 297 aaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacgatggccggtac 356 ||||| | ||| |||||||||||||||| || ||||||||||| |||||| | ||| Sbjct: 5416 aaggtcagcttcgtcttccgtgagcacaataactcccctgggtactatgatggctgatac 5475 Query: 357 tggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgag 416 |||||| ||||||| ||||||||||||| ||||| |||||||||||||||||||| ||| Sbjct: 5476 cggacaaagtggaagttgcctatgttcgggtgcactgacgccacacaggtgctcaaggag 5535 Query: 417 gtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaac 476 ||||||||||||||||||||||||| ||||| ||||||| |||| ||| ||||||||| Sbjct: 5536 gtggaggaggtcaagaaggagtaccttgacggctatgtccttatcaacggcttcgacaac 5595 Query: 477 atgcgtcaggtgcagtgcgtcagcttcatcgccttca 513 ||| | |||||||| ||||||| |||||| |||||| Sbjct: 5596 atgtgccaggtgcattgcgtcactttcatcaccttca 5632 Score = 295 bits (149), Expect = 9e-77 Identities = 299/348 (85%), Gaps = 2/348 (0%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||| ||||| ||||||||||||||||||||||||| |||||| |||||||| | ||| Sbjct: 3943 caggtttggccgatcgagggcatcaagaagttcgagatcctgtc--acttgccatccctc 4000 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 || |||||||||||| |||||||||||||||||||||| ||||||||| ||||| ||| Sbjct: 4001 tccatggaggccctcctcaagcaggtcgactacctgatcccctccaagtgagtgccctgc 4060 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 ||||||||||| || |||| ||||| |||||||||| ||| || ||||||||||| Sbjct: 4061 ctcgagttcagtaacattggcttcatattccgtgagcgcaataggtcccctgggtactat 4120 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || |||| |||||||||||||| ||||| || || ||||||||| ||| || Sbjct: 4121 gaccgctaatactaaacaatgtggaagctacctatctttgggtgcaccgacaccaagaag 4180 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 4181 gtgctcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgtctgcatcatc 4240 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttc 512 || ||||||||| |||| |||||| ||||||||||||||||| ||||| Sbjct: 4241 ggcttcgacaacctgcgccaggtgtagtgcgtcagcttcatcaccttc 4288 Score = 143 bits (72), Expect = 8e-31 Identities = 132/150 (88%), Gaps = 4/150 (2%) Strand = Plus / Plus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||||||| ||||| ||||| |||||||| ||| ||||||| || |||||||||||||| Sbjct: 626 atggcccccgccgtg-atggcttcgtcggctaccaccgtcgcacccttccaggggctcaa 684 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 |||||| ||||| |||||||||||||||||||| | ||| ||||||||| ||||||| Sbjct: 685 gtccacagccggtctccccgtcagccgccgctccagcgg---cagcctcggccgcgtcag 741 Query: 140 caacggtggaaggatcaggtgcatgcaggt 169 ||| || ||||||||||||||||||||||| Sbjct: 742 caatggcggaaggatcaggtgcatgcaggt 771
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 515 bits (260), Expect = e-143 Identities = 441/498 (88%), Gaps = 5/498 (1%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| ||||| |||||||| ||||| || |||||||||||||||||||| || ||||| Sbjct: 4 atggcttcgtccgccacctcggtcgcgcccttccaggggctcaagtccactgctggcctt 63 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||| |||| | |||| ||||||||||||||||||||||| ||| Sbjct: 64 cccgtcagccgccgcagcaacgccg---gccttggcagcgtcagcaacggtggaagaatc 120 Query: 156 aggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttg 215 | ||||||||||||||||| || |||||||||||||| |||||||||||||||||| || Sbjct: 121 cgatgcatgcaggtgtggcctattgagggcatcaagaaattcgagaccctgtcttacctg 180 Query: 216 ccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgg 275 |||||||||| |||||||||||| |||||| |||||| | ||||||||||||||||| Sbjct: 181 ccaccactcacagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgg 240 Query: 276 gtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcc 334 || || ||||| ||||||||||||||||| ||||||||||| |||||| | ||| |||| Sbjct: 241 gttccctgcctggagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctcc 299 Query: 335 tgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccga 394 ||| ||||| || ||| ||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 300 tggatactatgacggcaggtactggacaatgtggaagctgcccatgttcgggtgcaccga 359 Query: 395 cgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgt 454 |||| |||||||| |||| |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 360 cgcctcacaggtgatcaaggaggtggaggaggtcaagaaagagtaccctgacgcctatgt 419 Query: 455 ccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaa 514 |||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||| Sbjct: 420 ccgcatcatcggcttcgacaacatccgtcaagtgcagtgcgtcagtttcatcgccttcaa 479 Query: 515 gccaccaggctgcgagga 532 |||||| ||||||||||| Sbjct: 480 gccaccgggctgcgagga 497
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 515 bits (260), Expect = e-143 Identities = 441/498 (88%), Gaps = 5/498 (1%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||||||| | ||||| || |||||||||||||||||||| || ||||| Sbjct: 4 atggcttcttcggccaccacggtcgcgcccttccaggggctcaagtccactgctggcctt 63 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||| |||| | |||| ||||||||||||||||||||||| ||| Sbjct: 64 cccgtcagccgccgcagcaacgccg---gccttggcagcgtcagcaacggtggaagaatc 120 Query: 156 aggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttg 215 | ||||||||||||||||| || ||||||||||||||||||||||||||||||||| || Sbjct: 121 cgatgcatgcaggtgtggcctattgagggcatcaagaagttcgagaccctgtcttacctg 180 Query: 216 ccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgg 275 || |||||| |||||||||||| |||||| |||||| | ||||||||||||||||| Sbjct: 181 ccgccactctcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgg 240 Query: 276 gtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcc 334 || |||||||||||||||||||||||||| ||||||||||| |||||| | ||| |||| Sbjct: 241 gttccttgcctcgagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctcc 299 Query: 335 tgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccga 394 || |||||||| ||| ||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 300 cggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccga 359 Query: 395 cgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgt 454 |||| |||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 360 cgcctcacaggtgatcaaggaggttgaggaggtcaagaaggagtaccctgacgcctatgt 419 Query: 455 ccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaa 514 ||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 420 tcgcatcatcggcttcgacaacatccgtcaagtgcagtgcgtcagcttcatcgccttcaa 479 Query: 515 gccaccaggctgcgagga 532 |||||| ||||||||||| Sbjct: 480 gccaccgggctgcgagga 497
>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-B Length = 787 Score = 515 bits (260), Expect = e-143 Identities = 341/368 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 420 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 480 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 539 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 540 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 599 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 600 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 659 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 660 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 719 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 720 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 779 Query: 525 tgcgagga 532 |||||||| Sbjct: 780 tgcgagga 787 Score = 143 bits (72), Expect = 8e-31 Identities = 119/134 (88%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||| ||| ||||||| || |||||||||||||||||||| |||||||| Sbjct: 5 atggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggcctg 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| |||||||||||||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-B Length = 728 Score = 515 bits (260), Expect = e-143 Identities = 341/368 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 361 caggtgtggccaattgagggcatcaagaagttcgagaccctatcttacttgccacccctc 420 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 421 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 480 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| || ||||| ||||| Sbjct: 481 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccctggttactat 540 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 541 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 600 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 601 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcgtcatc 660 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 661 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 720 Query: 525 tgcgagga 532 |||||||| Sbjct: 721 tgcgagga 728 Score = 143 bits (72), Expect = 8e-31 Identities = 119/134 (88%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||| ||| ||||||| || |||||||||||||||||||| ||||| ||| Sbjct: 5 atggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| |||||||||||||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Hor-A Length = 605 Score = 515 bits (260), Expect = e-143 Identities = 341/368 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 | ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 298 accacggaggccctcctgaagcaggttgactacctgatccgctccaagtgggtgccctgc 357 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 477 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 ||||| |||||||||||||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 478 gtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtccgtatcatc 537 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 538 ggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 597 Query: 525 tgcgagga 532 |||||||| Sbjct: 598 tgcgagga 605 Score = 143 bits (72), Expect = 8e-31 Identities = 119/134 (88%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||| ||| ||||||| || |||||||||||||||||||| ||||| ||| Sbjct: 5 atggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | | || |||||||||||||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctc---cagcgccagcctcggcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-A Length = 607 Score = 515 bits (260), Expect = e-143 Identities = 341/368 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 240 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 299 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 300 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 359 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 360 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 419 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || ||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 420 gacggccgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 479 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 480 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 539 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||| | ||||||||| Sbjct: 540 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgcctttaggccaccaggt 599 Query: 525 tgcgagga 532 |||||||| Sbjct: 600 tgcgagga 607 Score = 135 bits (68), Expect = 2e-28 Identities = 118/134 (88%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 5 atggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctg 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| |||||||||||||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bro-B Length = 784 Score = 515 bits (260), Expect = e-143 Identities = 341/368 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 417 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 476 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||| ||||||||||| |||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 477 tccaccgaggccctcctgaagcagatcgactacttgatccgctccaagtgggtgccgtgc 536 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| |||||||||||||||| ||||||||||| |||||| Sbjct: 537 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaatgcatctcctggatactac 596 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 |||||||| |||||||||||||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 597 gatggccgttactggacaatgtggaagttgcctatgttcggatgcaccgatgcctcacag 656 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 ||| |||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 657 gtgatcaaggagctggaggaggtcaagaaggagtaccctgacgcctatgtccgcatcatc 716 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 717 ggtttcgataacttgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccgggt 776 Query: 525 tgcgagga 532 |||||||| Sbjct: 777 tgcgagga 784 Score = 149 bits (75), Expect = 1e-32 Identities = 119/134 (88%), Gaps = 6/134 (4%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||||||| Sbjct: 5 atggcttcgtcggccacctccgtcgcgcccttccagggtctcaagtccaccgccggcctg 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | || |||||||||||||||||| ||| ||||||||| Sbjct: 65 cccgtcagccgccgctcca------ctggcctcggcagcgtcagcagcggcggaaggatc 118 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 119 aggtgcatgcaggt 132
>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39 ribulosebisphosphate carboxylase) clones 234 and 406 Length = 743 Score = 509 bits (257), Expect = e-141 Identities = 275/281 (97%) Strand = Plus / Plus Query: 56 cgtcgctcctttccaggggctcaagtccaccgccggcctccccgtcagccgccgctcgaa 115 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1 cgtcgctcctttccaggggctcaagtccaccgccggcctccccgtcagccgccgctccaa 60 Query: 116 cggtgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcc 175 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggcgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcc 120 Query: 176 catcgagggcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggc 235 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 121 catcgagggcatcaagaagttcgagaccctgtcttacctgccaccgctcagcacggaggc 180 Query: 236 cctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcag 295 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cctcctcaagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcag 240 Query: 296 caaggttgggttcatcttccgtgagcacaacgcatctcctg 336 |||||||||||||||||||||||||||||||||||| |||| Sbjct: 241 caaggttgggttcatcttccgtgagcacaacgcatcacctg 281 Score = 416 bits (210), Expect = e-113 Identities = 228/234 (97%) Strand = Plus / Plus Query: 414 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 418 Query: 474 aacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggctgcgaggag 533 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 419 aacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccgggctgcgaggag 478 Query: 534 tccggcaaggcataaacagctcactgacgatgggccacatataaagtgccattgcagttt 593 ||||||||||| ||||||||||||| |||| ||||| |||||||||||||||||||||| Sbjct: 479 tccggcaaggcctaaacagctcactcacgacaggccatatataaagtgccattgcagttt 538 Query: 594 tgtcaactctgacattgctttgggttttccttctccatttatctttcttatttg 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 tgtcaactctgacattgctttgggttttccttctccatttatctttcttatttg 592
>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-B Length = 789 Score = 507 bits (256), Expect = e-140 Identities = 331/356 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 422 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 481 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 482 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 541 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 542 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 601 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 602 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccactcag 661 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 662 gtgctcaatgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 721 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 520 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 722 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 777 Score = 127 bits (64), Expect = 5e-26 Identities = 102/114 (89%), Gaps = 3/114 (2%) Strand = Plus / Plus Query: 56 cgtcgctcctttccaggggctcaagtccaccgccggcctccccgtcagccgccgctcgaa 115 |||||| || |||||||||||||||||||| ||||| |||||||||||||||||||| | Sbjct: 25 cgtcgcacccttccaggggctcaagtccacggccggtctccccgtcagccgccgctccag 84 Query: 116 cggtgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 169 ||| |||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 85 cgg---cagcctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ura-B Length = 787 Score = 507 bits (256), Expect = e-140 Identities = 340/368 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 420 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 480 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 539 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| |||||||||||||| || || || ||||||||| Sbjct: 540 ctcgagttcagcaaggttggcttcgtcttccgtgagcactacagctcccccgggtactac 599 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 600 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 659 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 660 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 719 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 720 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 779 Query: 525 tgcgagga 532 |||||||| Sbjct: 780 tgcgagga 787 Score = 143 bits (72), Expect = 8e-31 Identities = 119/134 (88%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||| ||| ||||||| || |||||||||||||||||||| |||||||| Sbjct: 5 atggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggcctg 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| |||||||||||||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-B Length = 792 Score = 507 bits (256), Expect = e-140 Identities = 340/368 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 425 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 484 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 485 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 544 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| || || || |||||| Sbjct: 545 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccggatactac 604 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 605 gatggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 664 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 665 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 724 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 725 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 784 Query: 525 tgcgagga 532 |||||||| Sbjct: 785 tgcgagga 792 Score = 135 bits (68), Expect = 2e-28 Identities = 118/134 (88%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 |||||||||||||| ||| ||||||| || ||||||||||||||||| || ||||| ||| Sbjct: 5 atggcctcgtcggctaccaccgtcgcacccttccaggggctcaagtcgacagccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | | || |||||||||||||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctc---cagcgccagcctcggcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||| ||||||||| Sbjct: 122 aggtacatgcaggt 135
>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-B Length = 792 Score = 507 bits (256), Expect = e-140 Identities = 340/368 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 425 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 484 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 485 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 544 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| || || || |||||| Sbjct: 545 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccggatactac 604 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 605 gatggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 664 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 665 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 724 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 725 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 784 Query: 525 tgcgagga 532 |||||||| Sbjct: 785 tgcgagga 792 Score = 135 bits (68), Expect = 2e-28 Identities = 118/134 (88%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||| ||| ||||||| || ||||||||||||||||| || ||||| ||| Sbjct: 5 atggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtcgacagccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | | || |||||||||||||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctc---cagcgccagcctcggcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-A Length = 611 Score = 507 bits (256), Expect = e-140 Identities = 340/368 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 244 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 303 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 304 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 363 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 364 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 423 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || ||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 424 gacggccgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 483 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 484 gtgctcaatgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 543 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||||||||||||||||||||||||||||||||| | |||||| || Sbjct: 544 ggcttcgacaacctgcgtcaggtgcagtgcgtcagcttcatcgcctttaggccaccgggt 603 Query: 525 tgcgagga 532 |||||||| Sbjct: 604 tgcgagga 611 Score = 127 bits (64), Expect = 5e-26 Identities = 117/134 (87%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| ||| Sbjct: 5 atggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| ||||||||| |||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggccgcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A2 Length = 604 Score = 507 bits (256), Expect = e-140 Identities = 340/368 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 ||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 477 gtgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 536 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 537 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccaggt 596 Query: 525 tgcgagga 532 |||||||| Sbjct: 597 tgcgagga 604 Score = 111 bits (56), Expect = 3e-21 Identities = 115/134 (85%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||| ||| ||||| | || ||||| |||||||||||||| ||||| ||| Sbjct: 5 atggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| ||||||||| |||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggccgcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p13-1 Length = 985 Score = 507 bits (256), Expect = e-140 Identities = 349/380 (91%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 602 caggtgtggccgattgagggcatcaagaagttcgagactctgtcttacttgccacccctc 661 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 662 tccacggaggccctcctgaagcaggtcgactacttgatccgctccaagtgggtgccctgc 721 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| | ||||||||||||||| || || ||||||||| Sbjct: 722 ctcgagttcagcaaggttggcttcgttttccgtgagcacaacagctcccccgggtactac 781 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 ||||| || |||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 782 gatggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgctacacag 841 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 842 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 901 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| | || ||||||||||||||||||||||| ||||||| |||||| || Sbjct: 902 ggcttcgacaacctacgccaggtgcagtgcgtcagcttcattgccttcaggccaccgggt 961 Query: 525 tgcgaggagtccggcaaggc 544 |||||||||||||||||||| Sbjct: 962 tgcgaggagtccggcaaggc 981 Score = 147 bits (74), Expect = 5e-32 Identities = 119/134 (88%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||||||||||||||| || |||||||| |||||||| ||||||||||| Sbjct: 16 atggcttcctcggccacctccgtcgcacccttccagggtctcaagtcgaccgccggcctg 75 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | | | || ||||| |||||||||||||||| ||||||||| Sbjct: 76 cccgtcagccgccgctccagcagcgccggcctcagcagcgtcagcaacggcggaaggatc 135 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 136 aggtgcatgcaggt 149
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 500 bits (252), Expect = e-138 Identities = 439/498 (88%), Gaps = 5/498 (1%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| ||||| |||||| |||| || || |||||||| |||||||||||||| || ||| Sbjct: 4 atggcttcgtccgccaccaccgtggcaccattccagggcctcaagtccaccgcaggactc 63 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||| | || | |||||||||| |||||||||||||||||||||| Sbjct: 64 cccgtcagccgccgc---agcgcctccagcctcggcaacgtcagcaacggtggaaggatc 120 Query: 156 aggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttg 215 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| || Sbjct: 121 aggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacctg 180 Query: 216 ccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgg 275 ||||||||| |||||||||||| |||||| |||||| | ||||||||||||||||| Sbjct: 181 ccaccactctcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgg 240 Query: 276 gtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcc 334 || || ||||| |||||||||||||| || ||||||||||| |||||| | ||| | || Sbjct: 241 gttccctgccttgagttcagcaaggtgggcttcatcttccgcgagcacggcagcaccccc 300 Query: 335 tgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccga 394 || |||||||| ||| ||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 301 -ggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccga 359 Query: 395 cgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgt 454 ||| | ||||| |||| ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 360 tgcctcgcaggtcatcaaggaggtagaggaggtcaagaaggagtaccctgacgcctatgt 419 Query: 455 ccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaa 514 |||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 420 ccgcatcatcggcttcgacaacatccgtcaagtgcagtgcgtcagcttcatcgccttcaa 479 Query: 515 gccaccaggctgcgagga 532 |||||| ||||||||||| Sbjct: 480 gccaccgggctgcgagga 497
>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-B Length = 787 Score = 500 bits (252), Expect = e-138 Identities = 339/368 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 420 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 480 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 539 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 540 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 599 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 600 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 659 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 ||||||| ||||||||||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 660 gtgctcagcgaggtggaggaggtcaagaaggagtaccctgatgcctatgtccgtgtcatc 719 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 720 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 779 Query: 525 tgcgagga 532 |||||||| Sbjct: 780 tgcgagga 787 Score = 143 bits (72), Expect = 8e-31 Identities = 119/134 (88%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||| ||| ||||||| || |||||||||||||||||||| ||||| ||| Sbjct: 5 atggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | | || |||||||||||||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctc---cagcgccagcctcggcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-A Length = 605 Score = 500 bits (252), Expect = e-138 Identities = 339/368 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacggaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 418 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 477 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 478 gtgctcaacgaggttgaggaggtcaagaaggagtaccctgacgcttatgtccgcgtcatc 537 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 597 Query: 525 tgcgagga 532 |||||||| Sbjct: 598 tgcgagga 605 Score = 135 bits (68), Expect = 2e-28 Identities = 118/134 (88%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 5 atggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctg 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| |||||||||||||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A3 Length = 604 Score = 500 bits (252), Expect = e-138 Identities = 339/368 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 ||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 477 gtgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 536 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 537 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccaggt 596 Query: 525 tgcgagga 532 || ||||| Sbjct: 597 tgggagga 604 Score = 111 bits (56), Expect = 3e-21 Identities = 115/134 (85%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||| ||| ||||| | || ||||| |||||||||||||| ||||| ||| Sbjct: 5 atggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| ||||||||| |||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggccgcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A1 Length = 604 Score = 500 bits (252), Expect = e-138 Identities = 339/368 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 ||||||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 477 gtgctcagcgaggtggaggaggtcaagaaggagtactctgacgcctatgtccgtgtcatc 536 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 537 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccaggt 596 Query: 525 tgcgagga 532 |||||||| Sbjct: 597 tgcgagga 604 Score = 111 bits (56), Expect = 3e-21 Identities = 115/134 (85%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||| ||| ||||| | || ||||| |||||||||||||| ||||| ||| Sbjct: 5 atggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| ||||||||| |||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggccgcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-A1 Length = 604 Score = 500 bits (252), Expect = e-138 Identities = 339/368 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 ||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 477 gtgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 536 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 537 ggcttcgacaacctgcgccaggtgcagtgcgtcagtttcatcgccttcaggccaccaggt 596 Query: 525 tgcgagga 532 |||||||| Sbjct: 597 tgcgagga 604 Score = 111 bits (56), Expect = 3e-21 Identities = 115/134 (85%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||| ||| ||||| | || ||||| |||||||||||||| ||||| ||| Sbjct: 5 atggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| ||||||||| |||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggccgcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 604 Score = 500 bits (252), Expect = e-138 Identities = 339/368 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 ||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 477 gtgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 536 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 537 ggcttcgacaacctgcgccaggtgcagtgcgtcagtttcatcgccttcaggccaccaggt 596 Query: 525 tgcgagga 532 |||||||| Sbjct: 597 tgcgagga 604 Score = 111 bits (56), Expect = 3e-21 Identities = 115/134 (85%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||| ||| ||||| | || ||||| |||||||||||||| ||||| ||| Sbjct: 5 atggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| ||||||||| |||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggccgcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-B Length = 772 Score = 498 bits (251), Expect = e-137 Identities = 338/367 (92%) Strand = Plus / Plus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 225 |||||||||| || ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 406 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctat 465 Query: 226 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 285 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 466 ccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgcc 525 Query: 286 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacg 345 ||||||||||||||||||| ||| ||||||||||||||||| ||||| |||||||||| Sbjct: 526 tcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactacg 585 Query: 346 atggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacagg 405 | || || |||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 586 acggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcagg 645 Query: 406 tgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcg 465 |||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 646 tgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatcg 705 Query: 466 gattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggct 525 | ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 706 gcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccaggtt 765 Query: 526 gcgagga 532 ||||||| Sbjct: 766 gcgagga 772 Score = 127 bits (64), Expect = 5e-26 Identities = 117/134 (87%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| ||| Sbjct: 5 atggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 |||||| |||||||||| | ||| |||||||||||||||||||| || ||||||||| Sbjct: 65 cccgtcggccgccgctccagcgg---cagcctcggcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-A Length = 604 Score = 492 bits (248), Expect = e-136 Identities = 341/372 (91%) Strand = Plus / Plus Query: 161 catgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccacc 220 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 catgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacc 292 Query: 221 actcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgcc 280 ||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 293 cctctccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgcc 352 Query: 281 ttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggta 340 ||||||||||||||||||||||| ||| ||||||||||||||||| || || || || Sbjct: 353 ctgcctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccggata 412 Query: 341 ctacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccac 400 |||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 413 ctacgacggccgatactggactatgtggaagctgcctatgttcgggtgcaccgacgccac 472 Query: 401 acaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcat 460 |||||||||| |||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 473 gcaggtgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgt 532 Query: 461 catcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 520 |||||| ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 533 catcggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 592 Query: 521 aggctgcgagga 532 || |||||||| Sbjct: 593 gggttgcgagga 604 Score = 127 bits (64), Expect = 5e-26 Identities = 117/134 (87%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| ||| Sbjct: 5 atggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| ||||||||| |||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggccgcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-A Length = 605 Score = 492 bits (248), Expect = e-136 Identities = 338/368 (91%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||| |||||||| |||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaaattcgagaccctgtcttacttgccacccctc 297 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacttgatccgctccaagtgggtgccctgc 357 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| || || || |||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccggatactac 417 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 418 gatggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 477 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 478 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 537 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 597 Query: 525 tgcgagga 532 |||||||| Sbjct: 598 tgcgagga 605 Score = 135 bits (68), Expect = 2e-28 Identities = 118/134 (88%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 5 atggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctg 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| |||||||||||||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-A Length = 604 Score = 492 bits (248), Expect = e-136 Identities = 338/368 (91%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 416 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 417 gacggccgatactggacaatgtggaagctccctatgttcgggtgcaccgacgccacacag 476 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 477 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 536 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || || |||||| |||| |||||||||||||||||||||| |||||||| |||||| || Sbjct: 537 ggctttgacaacctgcgccaggtgcagtgcgtcagcttcagcgccttcaggccaccgggt 596 Query: 525 tgcgagga 532 |||||||| Sbjct: 597 tgcgagga 604 Score = 111 bits (56), Expect = 3e-21 Identities = 115/134 (85%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||| ||| ||||| | || ||||| |||||||||||||| ||||| ||| Sbjct: 5 atggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| ||||||||| |||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggccgcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p10-1 Length = 629 Score = 492 bits (248), Expect = e-136 Identities = 347/380 (91%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 246 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 305 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 306 tccacagaggccctcctaaagcaggtagactacctgatccgctccaagtgggtgccctgc 365 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||| ||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 366 ctcgagtttagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 425 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || |||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 426 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcaa 485 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 ||||||||||||||||||||||||||||||||||||||||| || |||||||| ||| | Sbjct: 486 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgatgcctatgtccgtgtcaac 545 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 546 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccaggt 605 Query: 525 tgcgaggagtccggcaaggc 544 |||||||||||||||||||| Sbjct: 606 tgcgaggagtccggcaaggc 625 Score = 115 bits (58), Expect = 2e-22 Identities = 129/150 (86%), Gaps = 7/150 (4%) Strand = Plus / Plus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||||||| ||||| ||||| |||||||| ||| ||||||| || |||||||||||||| Sbjct: 1 atggcccccgccgtg-atggcttcgtcggctaccaccgtcgcacccttccaggggctcaa 59 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 |||||| ||||| || ||||||||||||||||| | || ||||||||| |||||| Sbjct: 60 gtccacagccggtctgcccgtcagccgccgctcca-----gcgagcctcggccgcgtca- 113 Query: 140 caacggtggaaggatcaggtgcatgcaggt 169 ||| || ||||||||||||||||||||||| Sbjct: 114 caatggcggaaggatcaggtgcatgcaggt 143
>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B2 Length = 781 Score = 484 bits (244), Expect = e-133 Identities = 337/368 (91%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || |||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 414 caggtgtggccaattgagggcatcaagaagttcgagaccttgtcttacttgccacccctc 473 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 474 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 533 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 534 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 593 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || ||||||||||||||||||||||| ||||| || |||||||||||||||||| Sbjct: 594 gacggtcgatactggacaatgtggaagctgcccatgtttgggtgcaccgacgccacacag 653 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 654 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 713 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 714 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 773 Query: 525 tgcgagga 532 |||||||| Sbjct: 774 tgcgagga 781 Score = 135 bits (68), Expect = 2e-28 Identities = 118/134 (88%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||| ||| |||| || || |||||||||||||||||||| ||||| ||| Sbjct: 5 atggcttcgtcggctaccaccgttgcacccttccaggggctcaagtccacagccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | | || |||||||||||||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctc---cagcgccagcctcggcagcgtcagcaatgggggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-B Length = 781 Score = 484 bits (244), Expect = e-133 Identities = 337/368 (91%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || |||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 414 caggtgtggccaattgagggcatcaagaagttcgagaccttgtcttacttgccacccctc 473 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 474 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 533 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 ||||||||||||||||| || || ||||||||||||||||| || || ||||||||| Sbjct: 534 ctcgagttcagcaaggtaggcatcgtcttccgtgagcacaacagctcccccgggtactac 593 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || ||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 594 gacggtcgatactggacaatgtggaagctgcccatgttcgggtgcaccgacgccacacag 653 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 654 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 713 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 714 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 773 Query: 525 tgcgagga 532 |||||||| Sbjct: 774 tgcgagga 781 Score = 151 bits (76), Expect = 3e-33 Identities = 120/134 (89%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||| ||| ||||||| || |||||||||||||||||||||||||| ||| Sbjct: 5 atggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccaccgccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| |||||||||||||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-B Length = 783 Score = 484 bits (244), Expect = e-133 Identities = 328/356 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 421 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 480 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 481 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 540 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||| ||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 541 ctcgagtttagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 600 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 ||| | || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 601 gatagtcgatactggacaatgtggaagctgcctatgttcggttgcaccgacgccacacag 660 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 661 gtgctcaatgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 720 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 520 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 721 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 776 Score = 111 bits (56), Expect = 3e-21 Identities = 115/134 (85%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||| ||| |||||| || |||||||||||||||||||| | ||| ||| Sbjct: 5 atggcttcgtcggctaccagcgtcgcacccttccaggggctcaagtccacaggcggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 |||||||| |||||||| | || |||||||||||||||||||| || ||||||||| Sbjct: 65 cccgtcagtcgccgctccagaggc---agcctcggcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A3 Length = 605 Score = 484 bits (244), Expect = e-133 Identities = 337/368 (91%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || |||||||||||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 418 gacggacgatactggacaatgtggaagctacctatgttcgggtgcaccgacgccacgcag 477 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 478 gtgctcaacgaggttgaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 537 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 597 Query: 525 tgcgagga 532 |||||||| Sbjct: 598 tgcgagga 605 Score = 135 bits (68), Expect = 2e-28 Identities = 118/134 (88%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||| ||| ||||||| || ||||||||||||||||| || ||||| ||| Sbjct: 5 atggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtcgacagccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | | || |||||||||||||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctc---cagcgccagcctcggcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A2 Length = 605 Score = 484 bits (244), Expect = e-133 Identities = 337/368 (91%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || |||||||||||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 418 gacggacgatactggacaatgtggaagctacctatgttcgggtgcaccgacgccacgcag 477 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 478 gtgctcaacgaggttgaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 537 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 597 Query: 525 tgcgagga 532 |||||||| Sbjct: 598 tgcgagga 605 Score = 135 bits (68), Expect = 2e-28 Identities = 118/134 (88%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 5 atggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctg 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| |||||||||||||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A1 Length = 605 Score = 484 bits (244), Expect = e-133 Identities = 337/368 (91%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || |||||||||||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 418 gacggacgatactggacaatgtggaagctacctatgttcgggtgcaccgacgccacgcag 477 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 478 gtgctcaacgaggttgaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 537 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccgggt 597 Query: 525 tgcgagga 532 |||||||| Sbjct: 598 tgcgagga 605 Score = 135 bits (68), Expect = 2e-28 Identities = 118/134 (88%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 5 atggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctg 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| |||||||||||||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 482 bits (243), Expect = e-133 Identities = 371/411 (90%), Gaps = 2/411 (0%) Strand = Plus / Plus Query: 123 agcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgag 182 ||||||||||||||||||||||||||||| ||| | ||||||||||||||||| || ||| Sbjct: 88 agcctcggcagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggccgattgag 147 Query: 183 ggcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctcctt 242 |||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 148 ggcatcaagaagttcgagaccctgtcttacctgccaccactctcagaggaggccctcctg 207 Query: 243 aagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggtt 302 |||||| |||| | | ||||||||||||||||||| || ||||| ||||||||||||||| Sbjct: 208 aagcagatcgaattcttgatccgctccaagtgggttccctgcctggagttcagcaaggtt 267 Query: 303 gggttcatcttccgtgagcacaac-gcatctcctgggtactacgatggccggtactggac 361 || ||||||||||| |||||| | ||| |||| || |||||||| ||| |||||||||| Sbjct: 268 ggcttcatcttccgcgagcacggcagca-ctcccggatactacgacggcaggtactggac 326 Query: 362 aatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtgga 421 ||||||||||||||| |||||||| |||||||||||| |||||||| |||| |||||||| Sbjct: 327 aatgtggaagctgcccatgttcggctgcaccgacgcctcacaggtgatcaaggaggtgga 386 Query: 422 ggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcg 481 ||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| || Sbjct: 387 ggaggtcaagaaggagtaccctgacgcctatgtccgcatcatcggcttagacaacatccg 446 Query: 482 tcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggctgcgagga 532 ||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 447 tcaagtgcagtgtgtcagcttcatcgccttcaagccaccaggctgcgagga 497 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| ||||| |||||| ||||||| || |||||||| |||||||||||||| |||||| Sbjct: 4 atggcttcgtccgccaccaccgtcgcacccttccagggcctcaagtccaccgctggcctc 63 Query: 96 cccgtcagccg 106 ||||||||||| Sbjct: 64 cccgtcagccg 74
>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-A Length = 605 Score = 476 bits (240), Expect = e-131 Identities = 336/368 (91%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtagactacctgatccgctccaagtgggtgccctgc 357 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||| ||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 358 ctcgagtttagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 417 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || |||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 418 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcaa 477 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 ||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 478 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgatgcctatgtccgtgtcatc 537 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccaggt 597 Query: 525 tgcgagga 532 |||||||| Sbjct: 598 tgcgagga 605 Score = 127 bits (64), Expect = 5e-26 Identities = 117/134 (87%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 5 atggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctg 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| ||||||||| |||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggccgcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-A Length = 605 Score = 476 bits (240), Expect = e-131 Identities = 336/368 (91%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtagactacctgatccgctccaagtgggtgccctgc 357 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||| ||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 358 ctcgagtttagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 417 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || || |||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 418 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcaa 477 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 ||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 478 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgatgcctatgtccgtgtcatc 537 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccaccaggt 597 Query: 525 tgcgagga 532 |||||||| Sbjct: 598 tgcgagga 605 Score = 127 bits (64), Expect = 5e-26 Identities = 117/134 (87%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 5 atggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctg 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| ||||||||| |||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggccgcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-A Length = 591 Score = 468 bits (236), Expect = e-128 Identities = 335/368 (91%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 224 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 283 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 |||||| |||||| | ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 284 tccacggaagccctcttgaagcaggtcgactacctgatccgctccaagtgggtaccctgc 343 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||| ||||||||| || || || |||||| Sbjct: 344 ctcgagttcagcaaggttggcttcgtcttccgcgagcacaacagctcccccggttactac 403 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || |||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| Sbjct: 404 gacggccggtactggacaatgtggaagctgcctatgttcggctgcacggacgccactcag 463 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 464 gtgctcaatgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 523 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| |||| ||||||||||||||||||||||||||||| | |||||| || Sbjct: 524 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgcctttaggccaccgggt 583 Query: 525 tgcgagga 532 |||||||| Sbjct: 584 tgcgagga 591 Score = 127 bits (64), Expect = 5e-26 Identities = 117/134 (87%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 5 atggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctg 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||||| | ||| |||||||||| ||||||||| || ||||||||| Sbjct: 65 cccgtcagccgccgctccagcgg---cagcctcggcaacgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-B Length = 738 Score = 464 bits (234), Expect = e-127 Identities = 309/334 (92%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 405 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 464 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 465 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 524 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 525 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 584 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 585 gacggccgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 644 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 ||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 645 gtgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 704 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtca 498 || || |||||| |||| |||||||||||||||| Sbjct: 705 ggctttgacaacctgcgccaggtgcagtgcgtca 738 Score = 127 bits (64), Expect = 5e-26 Identities = 117/134 (87%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| ||| Sbjct: 5 atggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 |||||| |||||||||| | ||| |||||||||||||||||||| || ||||||||| Sbjct: 65 cccgtcggccgccgctccagcgg---cagcctcggcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B1 Length = 787 Score = 458 bits (231), Expect = e-125 Identities = 333/367 (90%) Strand = Plus / Plus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 225 |||||||||| || ||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 421 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccacccctat 480 Query: 226 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 285 ||||||||||||||| || ||||||||||||||||||||||| ||||||||||| |||| Sbjct: 481 ccacggaggccctcctgaaacaggtcgactacctgatccgctcaaagtgggtgccctgcc 540 Query: 286 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacg 345 ||||||||||||||||||| ||| ||||||||||||||||| || || |||||||||| Sbjct: 541 tcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactacg 600 Query: 346 atggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacagg 405 | ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 601 acggccgatactggacaatgtggaagctgcctatgttcgggtgcactgacgccacacagg 660 Query: 406 tgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcg 465 |||| | |||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 661 tgctgatcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatcg 720 Query: 466 gattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggct 525 | ||||||||| |||| ||||||||||||||||||||||||||||| | |||||| || | Sbjct: 721 gcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgcctttaggccaccgggtt 780 Query: 526 gcgagga 532 ||||||| Sbjct: 781 gcgagga 787 Score = 119 bits (60), Expect = 1e-23 Identities = 116/134 (86%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| ||| Sbjct: 5 atggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 |||||| |||||||||| | ||| |||||| ||||||||||||| || ||||||||| Sbjct: 65 cccgtcggccgccgctccagcgg---cagcctcagcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-B Length = 787 Score = 458 bits (231), Expect = e-125 Identities = 333/367 (90%) Strand = Plus / Plus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 225 |||||||||| || ||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 421 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccacccctat 480 Query: 226 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 285 ||||||||||||||| || ||||||||||||||||||||||| ||||||||||| |||| Sbjct: 481 ccacggaggccctcctgaaacaggtcgactacctgatccgctcaaagtgggtgccctgcc 540 Query: 286 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacg 345 ||||||||||||||||||| ||| ||||||||||||||||| || || |||||||||| Sbjct: 541 tcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactacg 600 Query: 346 atggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacagg 405 | ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 601 acggccgatactggacaatgtggaagctgcctatgttcgggtgcactgacgccacacagg 660 Query: 406 tgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcg 465 |||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 661 tgctgaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatcg 720 Query: 466 gattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggct 525 | ||||||||| |||| |||||||||||||||||||||||||||| | |||||| || | Sbjct: 721 gcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgcctataggccaccgggtt 780 Query: 526 gcgagga 532 ||||||| Sbjct: 781 gcgagga 787 Score = 119 bits (60), Expect = 1e-23 Identities = 116/134 (86%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| ||| Sbjct: 5 atggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctc 64 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 |||||| |||||||||| | ||| |||||| ||||||||||||| || ||||||||| Sbjct: 65 cccgtcggccgccgctccagcgg---cagcctcagcagcgtcagcaatggcggaaggatc 121 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 122 aggtgcatgcaggt 135
>dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full insert sequence Length = 947 Score = 436 bits (220), Expect = e-119 Identities = 446/520 (85%), Gaps = 1/520 (0%) Strand = Plus / Plus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 69 atggcgcccaccgtg-atggcctcgtcggccacctccgttgctcccttccaggggctcaa 127 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 ||||||||||| |||||||||||||||||||| ||| | || |||||||||||||||| Sbjct: 128 atccaccgccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgtcag 187 Query: 140 caacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcga 199 |||||||||||||||||| || |||||||||||||| || || |||||||||||||| || Sbjct: 188 caacggtggaaggatcagctgtatgcaggtgtggccgattgaaggcatcaagaagtttga 247 Query: 200 gaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacct 259 ||||||||| ||| ||||||| |||| |||| |||| | |||||| |||| ||||| Sbjct: 248 gaccctgtcgtacctgccaccgctcacggtcgaggacctcttgaagcagatcgagtacct 307 Query: 260 gatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtga 319 | |||| ||||| |||||||||||||||||||| || ||||| |||||| ||| |||||| Sbjct: 308 gctccggtccaaatgggtgccttgcctcgagtttagtaaggtcgggttcgtctaccgtga 367 Query: 320 gcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctat 379 | || || |||||||||||||| |||||| |||||||||| ||||||||||||||||| Sbjct: 368 gaaccacaggtctcctgggtactatgatggcaggtactggaccatgtggaagctgcctat 427 Query: 380 gttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagta 439 |||||||||||| || ||||| ||||||||||| ||| | ||||||| |||||||| || Sbjct: 428 gttcggatgcactgatgccacccaggtgctcaaggagctcgaggaggccaagaaggcata 487 Query: 440 ccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcag 499 || || || | ||| ||||||||||| ||||||||| | | |||||||||| | || Sbjct: 488 tccagatgcatttgttcgcatcatcggcttcgacaacgtcaggcaggtgcagttgattag 547 Query: 500 cttcatcgccttcaagccaccaggctgcgaggagtccggc 539 ||||||||||| |||||| || || ||||||||||||||| Sbjct: 548 cttcatcgcctacaagcccccgggttgcgaggagtccggc 587
>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 586 Score = 432 bits (218), Expect = e-118 Identities = 337/374 (90%), Gaps = 2/374 (0%) Strand = Plus / Plus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 225 |||||||||| || |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 213 aggtgtggccgattgagggcatcaagaagttcgagaccctttcttacttgccaccactct 272 Query: 226 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 285 |||||||||||| |||||| |||||| | ||||||||||||||||||| || |||| Sbjct: 273 cagaggaggccctcctaaagcagatcgacttcttgatccgctccaagtgggttccctgcc 332 Query: 286 tcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtactac 344 | ||||||||||||||||| ||||||||||| |||||| | ||| | || || |||||| Sbjct: 333 ttgagttcagcaaggttggcttcatcttccgcgagcacggcagcaccccc-ggatactac 391 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || ||| |||||||||||||||||||| |||| |||||||| |||||||||||| ||||| Sbjct: 392 gacggcaggtactggacaatgtggaagttgcccatgttcgggtgcaccgacgcctcacag 451 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 ||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 452 gtgatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcatcatc 511 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 512 ggcttcgacaacatccgtcaagtgcagtgcgtcagcttcatcgccttcaagccaccaggc 571 Query: 525 tgcgaggagtccgg 538 |||||||| ||||| Sbjct: 572 tgcgaggaatccgg 585 Score = 135 bits (68), Expect = 2e-28 Identities = 118/134 (88%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||||||||||||||| || |||||||| |||||||||||||| ||||| Sbjct: 4 atggcttcttcggccacctccgtcgcgcccttccagggcctcaagtccaccgctggcctt 63 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||| Sbjct: 64 cccgtcagccgccgc---agcgcctccagcctcggcagcgtcagcaacggtggaaggatc 120 Query: 156 aggtgcatgcaggt 169 || ||||||||||| Sbjct: 121 agatgcatgcaggt 134
>gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 860 Score = 418 bits (211), Expect = e-114 Identities = 443/519 (85%), Gaps = 1/519 (0%) Strand = Plus / Plus Query: 17 gctatggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggct 76 |||||||||||||||||| |||||||| |||||||||||||| ||||| ||||| ||||| Sbjct: 49 gctatggcccccaccgtg-atggcctcctcggccacctccgtggctccattccaagggct 107 Query: 77 caagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgt 136 ||||||||||||||| |||||||||||||||||||| | | | || |||||| ||| Sbjct: 108 caagtccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgt 167 Query: 137 cagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagtt 196 |||||| || |||||||||| |||||||||||||||||| || ||||||||||||||||| Sbjct: 168 cagcaatggcggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagtt 227 Query: 197 cgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgacta 256 ||||||||| || ||| |||||||||||| | ||||| || | |||||| |||| || Sbjct: 228 cgagaccctatcgtacctgccaccactcaccgtggaggatcttttgaagcagatcgagta 287 Query: 257 cctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccg 316 |||| | || |||||||||||||||||||||||||||||||||||||| ||| ||| ||| Sbjct: 288 cctgcttcgatccaagtgggtgccttgcctcgagttcagcaaggttggattcgtctaccg 347 Query: 317 tgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcc 376 |||| || || ||||| ||||||||||||||| |||| ||||| |||||||||||||| Sbjct: 348 tgagaaccacaggtctcccgggtactacgatggcaggtattggaccatgtggaagctgcc 407 Query: 377 tatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaagga 436 |||||||| |||||||| ||||| ||||||||||| ||| | ||||||| |||||||| Sbjct: 408 catgttcggctgcaccgatgccacccaggtgctcaaggagctcgaggaggccaagaaggc 467 Query: 437 gtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgt 496 ||||| || || | |||||| |||||||| ||||||||| | | |||||||||| | Sbjct: 468 ctaccccgatgcctttgtccgtatcatcggcttcgacaacgtcaggcaggtgcagttgat 527 Query: 497 cagcttcatcgccttcaagccaccaggctgcgaggagtc 535 ||||||||||||| |||||| ||||| ||||||||||| Sbjct: 528 tagcttcatcgcctacaagcccccaggttgcgaggagtc 566
>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 620 Score = 418 bits (211), Expect = e-114 Identities = 336/375 (89%), Gaps = 2/375 (0%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 246 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccaccactg 305 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 |||||||||||| |||||| |||||| | ||||||||||||||||||| || ||| Sbjct: 306 tcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgggttccctgc 365 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 343 |||||||||||||||||||| ||||||||||| |||||| | ||| |||| || ||||| Sbjct: 366 ctcgagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctcccggatacta 424 Query: 344 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 403 ||| ||| ||||||||||||||||||||||||| |||||||| ||||| |||||| |||| Sbjct: 425 cgacggcaggtactggacaatgtggaagctgcccatgttcggctgcactgacgcctcaca 484 Query: 404 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 463 |||| |||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 485 ggtgatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgttcgcatcat 544 Query: 464 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 523 ||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| || Sbjct: 545 cggcttcgacaacatccgtcaagtgcagtgcgtcagcttcatcgcattcaagccaccggg 604 Query: 524 ctgcgaggagtccgg 538 ||||||||| ||||| Sbjct: 605 ctgcgaggaatccgg 619 Score = 135 bits (68), Expect = 2e-28 Identities = 109/122 (89%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 48 gccacctccgtcgctcctttccaggggctcaagtccaccgccggcctccccgtcagccgc 107 |||||||||||||| || |||||||| |||||||||||||| |||||||||||||||||| Sbjct: 16 gccacctccgtcgcgcccttccagggcctcaagtccaccgctggcctccccgtcagccgc 75 Query: 108 cgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcag 167 ||| | | ||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 76 cgc---agcaatgccggcctcggcagcgtcagcaacggcggaaggatcaggtgcatgcag 132 Query: 168 gt 169 || Sbjct: 133 gt 134
>dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full insert sequence Length = 899 Score = 418 bits (211), Expect = e-114 Identities = 443/519 (85%), Gaps = 1/519 (0%) Strand = Plus / Plus Query: 17 gctatggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggct 76 |||||||||||||||||| |||||||| |||||||||||||| ||||| ||||| ||||| Sbjct: 66 gctatggcccccaccgtg-atggcctcctcggccacctccgtggctccattccaagggct 124 Query: 77 caagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgt 136 ||||||||||||||| |||||||||||||||||||| | | | || |||||| ||| Sbjct: 125 caagtccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgt 184 Query: 137 cagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagtt 196 |||||| || |||||||||| |||||||||||||||||| || ||||||||||||||||| Sbjct: 185 cagcaatggcggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagtt 244 Query: 197 cgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgacta 256 ||||||||| || ||| |||||||||||| | ||||| || | |||||| |||| || Sbjct: 245 cgagaccctatcgtacctgccaccactcaccgtggaggatcttttgaagcagatcgagta 304 Query: 257 cctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccg 316 |||| | || |||||||||||||||||||||||||||||||||||||| ||| ||| ||| Sbjct: 305 cctgcttcgatccaagtgggtgccttgcctcgagttcagcaaggttggattcgtctaccg 364 Query: 317 tgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcc 376 |||| || || ||||| ||||||||||||||| |||| ||||| |||||||||||||| Sbjct: 365 tgagaaccacaggtctcccgggtactacgatggcaggtattggaccatgtggaagctgcc 424 Query: 377 tatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaagga 436 |||||||| |||||||| ||||| ||||||||||| ||| | ||||||| |||||||| Sbjct: 425 catgttcggctgcaccgatgccacccaggtgctcaaggagctcgaggaggccaagaaggc 484 Query: 437 gtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgt 496 ||||| || || | |||||| |||||||| ||||||||| | | |||||||||| | Sbjct: 485 ctaccccgatgcctttgtccgtatcatcggcttcgacaacgtcaggcaggtgcagttgat 544 Query: 497 cagcttcatcgccttcaagccaccaggctgcgaggagtc 535 ||||||||||||| |||||| ||||| ||||||||||| Sbjct: 545 tagcttcatcgcctacaagcccccaggttgcgaggagtc 583
>gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate carboxylase/oxygenase (rbcS) mRNA, complete cds Length = 808 Score = 416 bits (210), Expect = e-113 Identities = 441/516 (85%), Gaps = 4/516 (0%) Strand = Plus / Plus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||||||| ||||| ||||| |||||||||||| |||||||||| |||||||||||||| Sbjct: 38 atggccccctccgtg-atggcgtcgtcggccaccaccgtcgctcccttccaggggctcaa 96 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 ||||||||||||| | |||||| ||||||||| ||| | ||| |||||| |||||| Sbjct: 97 gtccaccgccggcatgcccgtcgcccgccgctccaact---ccagcttcggcaacgtcag 153 Query: 140 caacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcga 199 ||| || || |||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 154 caatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcga 213 Query: 200 gaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacct 259 |||||| || ||| ||||||| |||| | ||||| |||||| |||||| |||| ||||| Sbjct: 214 gaccctctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacct 273 Query: 260 gatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtga 319 | |||| |||||||||||||| |||||||||||||||||||| || || ||| |||||| Sbjct: 274 gctccgttccaagtgggtgccctgcctcgagttcagcaaggtcggatttgtctaccgtga 333 Query: 320 gcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctat 379 | || || || ||||| |||||||| ||| |||||||||| |||||||||||||| || Sbjct: 334 gaaccacaagtcccctggatactacgacggcaggtactggaccatgtggaagctgcccat 393 Query: 380 gttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagta 439 |||||| |||||||||||||| ||||||||||| ||| | ||||||| |||||||| ||| Sbjct: 394 gttcgggtgcaccgacgccacccaggtgctcaaggagctcgaggaggccaagaaggcgta 453 Query: 440 ccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcag 499 |||||| || | ||||| |||||||| ||||||||| | | ||||||||| | |||| Sbjct: 454 ccctgatgcattcgtccgtatcatcggcttcgacaacgttaggcaggtgcagctcatcag 513 Query: 500 cttcatcgccttcaagccaccaggctgcgaggagtc 535 ||||||||||| |||||| || |||||||||||||| Sbjct: 514 cttcatcgcctacaagcccccgggctgcgaggagtc 549
>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 600 Score = 414 bits (209), Expect = e-112 Identities = 331/369 (89%), Gaps = 2/369 (0%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 226 caggtgtggccgactgagggcatcaagaagttcgagaccctttcttacctgccaccactc 285 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 | |||||||||||| || ||| |||||| | ||||||||||||||||||| || ||| Sbjct: 286 tccgaggaggccctcctgaaacagatcgacttcttgatccgctccaagtgggttccctgc 345 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 343 |||||||||||||||||||| ||||||||||| |||||| | ||| | || || ||||| Sbjct: 346 ctcgagttcagcaaggttggcttcatcttccgcgagcacggcagcaccccc-ggatacta 404 Query: 344 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 403 ||| ||| ||||||||||||||||||||||||| |||||||| |||||||||||| | || Sbjct: 405 cgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccgacgcctccca 464 Query: 404 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 463 ||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 465 ggtcatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcatcat 524 Query: 464 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 523 ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 525 cggcttcgacaacatccgtcaagtgcagtgcgtcagcttcatcgccttcaagccaccagg 584 Query: 524 ctgcgagga 532 ||||||||| Sbjct: 585 ctgcgagga 593 Score = 119 bits (60), Expect = 1e-23 Identities = 116/134 (86%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| ||||| |||||||||||||| ||||||||||| ||||||||||| || || ||| Sbjct: 4 atggcttcgtccgccacctccgtcgcgcctttccagggcctcaagtccacggcagggctc 63 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||||||| | || | ||||| ||||||||||||||||||||||| ||| Sbjct: 64 cccgtcagccgccgc---agcgcctccagcctgggcagcgtcagcaacggtggaagaatc 120 Query: 156 aggtgcatgcaggt 169 || ||||||||||| Sbjct: 121 agatgcatgcaggt 134
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, nuclear gene encoding chloroplast protein, partial cds Length = 594 Score = 414 bits (209), Expect = e-112 Identities = 331/369 (89%), Gaps = 2/369 (0%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 279 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 |||||||||||| |||||| |||||| | ||||||||||||||||||| || ||| Sbjct: 280 tctgaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgggttccctgc 339 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 343 || ||||||||||||||||| ||||||||||| | |||| | ||| | || || ||||| Sbjct: 340 cttgagttcagcaaggttggcttcatcttccgcgtgcacggcagcaccccc-ggatacta 398 Query: 344 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 403 ||| ||| |||||||||||||||||||| |||| |||||||| ||||| |||||| |||| Sbjct: 399 cgacggcaggtactggacaatgtggaagttgcccatgttcggctgcacagacgcctcaca 458 Query: 404 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 463 ||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 459 ggtcatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcatcat 518 Query: 464 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 523 ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 519 cggcttcgacaacatccgtcaagtgcagtgcgtcagcttcatcgccttcaagccaccagg 578 Query: 524 ctgcgagga 532 ||||||||| Sbjct: 579 ctgcgagga 587 Score = 127 bits (64), Expect = 5e-26 Identities = 117/134 (87%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| ||||| ||||||||||| || || |||||||| |||||||||||||| |||||| Sbjct: 4 atggcttcgtccgccacctccgttgcgcccttccagggcctcaagtccaccgctggcctc 63 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 |||||||||||||| | | ||| |||||||||||||||||||||| ||||||||| Sbjct: 64 gccgtcagccgccgc---agcaatgccggcctcggcagcgtcagcaacggcggaaggatc 120 Query: 156 aggtgcatgcaggt 169 |||||||||||||| Sbjct: 121 aggtgcatgcaggt 134
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ave-A Length = 590 Score = 414 bits (209), Expect = e-112 Identities = 331/369 (89%), Gaps = 2/369 (0%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 223 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttatctgccaccactg 282 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 |||||||||| | |||||| |||||| ||||||||||||||||||||| || ||| Sbjct: 283 tcagaggaggccctcttgaagcagatcgacttcctgatccgctccaagtgggttccctgc 342 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 343 || |||||||||||||| || |||||||||||||||||| | ||| |||| || ||||| Sbjct: 343 ctggagttcagcaaggtgggcttcatcttccgtgagcacggcagca-ctcccggatacta 401 Query: 344 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 403 ||| ||| ||||||||||||||||||||||||| |||||||| |||||||||||| | || Sbjct: 402 cgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccgacgcctccca 461 Query: 404 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 463 ||| |||| |||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 462 ggtcatcaaggaggtggaggaggtgaagaaggagtaccctgacgcctatgtccgcatcat 521 Query: 464 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 523 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 cggtttcgacaacatccgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 581 Query: 524 ctgcgagga 532 ||||||||| Sbjct: 582 ctgcgagga 590 Score = 101 bits (51), Expect = 3e-18 Identities = 107/125 (85%), Gaps = 3/125 (2%) Strand = Plus / Plus Query: 45 tcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctccccgtcagc 104 ||||| ||||||||||| || |||||||| ||||||||||| || ||||| |||||| || Sbjct: 14 tcggcgacctccgtcgcccccttccagggcctcaagtccactgctggccttcccgtcggc 73 Query: 105 cgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatg 164 |||||| |||| | ||||||||| |||||||||||||||||||||||| |||||| Sbjct: 74 cgccgcagcaacgccg---gcctcggcaacgtcagcaacggtggaaggatcagatgcatg 130 Query: 165 caggt 169 ||||| Sbjct: 131 caggt 135
>dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full insert sequence Length = 984 Score = 412 bits (208), Expect = e-112 Identities = 440/516 (85%), Gaps = 1/516 (0%) Strand = Plus / Plus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||||||| ||||| ||||| |||||||||||| |||||||||| |||||||||||||| Sbjct: 211 atggccccctccgtg-atggcgtcgtcggccaccaccgtcgctcccttccaggggctcaa 269 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 ||||||||||||| | |||||| ||||||||| | | ||| |||||| |||||| Sbjct: 270 gtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcag 329 Query: 140 caacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcga 199 ||| || || |||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 330 caatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcga 389 Query: 200 gaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacct 259 |||||| || ||| ||||||| |||| | ||||| |||||| |||||| |||| ||||| Sbjct: 390 gaccctctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacct 449 Query: 260 gatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtga 319 | |||| |||||||||||||| |||||||||||||||||||| || ||| ||| |||||| Sbjct: 450 gctccgttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgtctaccgtga 509 Query: 320 gcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctat 379 | || || ||| || || |||||||||||| |||||||||| |||||||||||||| || Sbjct: 510 gaaccacagatcccccggatactacgatggcaggtactggaccatgtggaagctgcccat 569 Query: 380 gttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagta 439 |||||| ||||| |||||||| ||||||||||| ||| | ||||||| |||||||| ||| Sbjct: 570 gttcgggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaagaaggcgta 629 Query: 440 ccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcag 499 |||||| || | ||||| |||||||| ||||||||| | | ||||||||| | |||| Sbjct: 630 ccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgcagctcatcag 689 Query: 500 cttcatcgccttcaagccaccaggctgcgaggagtc 535 ||||||||||| |||||| || |||||||||||||| Sbjct: 690 cttcatcgcctacaagcccccgggctgcgaggagtc 725
>dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full insert sequence Length = 828 Score = 412 bits (208), Expect = e-112 Identities = 440/516 (85%), Gaps = 1/516 (0%) Strand = Plus / Plus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||||||| ||||| ||||| |||||||||||| |||||||||| |||||||||||||| Sbjct: 57 atggccccctccgtg-atggcgtcgtcggccaccaccgtcgctcccttccaggggctcaa 115 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 ||||||||||||| | |||||| ||||||||| | | ||| |||||| |||||| Sbjct: 116 gtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcag 175 Query: 140 caacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcga 199 ||| || || |||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 176 caatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcga 235 Query: 200 gaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacct 259 |||||| || ||| ||||||| |||| | ||||| |||||| |||||| |||| ||||| Sbjct: 236 gaccctctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacct 295 Query: 260 gatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtga 319 | |||| |||||||||||||| |||||||||||||||||||| || ||| ||| |||||| Sbjct: 296 gctccgttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgtctaccgtga 355 Query: 320 gcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctat 379 | || || ||| || || |||||||||||| |||||||||| |||||||||||||| || Sbjct: 356 gaaccacagatcccccggatactacgatggcaggtactggaccatgtggaagctgcccat 415 Query: 380 gttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagta 439 |||||| ||||| |||||||| ||||||||||| ||| | ||||||| |||||||| ||| Sbjct: 416 gttcgggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaagaaggcgta 475 Query: 440 ccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcag 499 |||||| || | ||||| |||||||| ||||||||| | | ||||||||| | |||| Sbjct: 476 ccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgcagctcatcag 535 Query: 500 cttcatcgccttcaagccaccaggctgcgaggagtc 535 ||||||||||| |||||| || |||||||||||||| Sbjct: 536 cttcatcgcctacaagcccccgggctgcgaggagtc 571
>dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full insert sequence Length = 830 Score = 412 bits (208), Expect = e-112 Identities = 440/516 (85%), Gaps = 1/516 (0%) Strand = Plus / Plus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||||||| ||||| ||||| |||||||||||| |||||||||| |||||||||||||| Sbjct: 60 atggccccctccgtg-atggcgtcgtcggccaccaccgtcgctcccttccaggggctcaa 118 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 ||||||||||||| | |||||| ||||||||| | | ||| |||||| |||||| Sbjct: 119 gtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcag 178 Query: 140 caacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcga 199 ||| || || |||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 179 caatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcga 238 Query: 200 gaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacct 259 |||||| || ||| ||||||| |||| | ||||| |||||| |||||| |||| ||||| Sbjct: 239 gaccctctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacct 298 Query: 260 gatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtga 319 | |||| |||||||||||||| |||||||||||||||||||| || ||| ||| |||||| Sbjct: 299 gctccgttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgtctaccgtga 358 Query: 320 gcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctat 379 | || || ||| || || |||||||||||| |||||||||| |||||||||||||| || Sbjct: 359 gaaccacagatcccccggatactacgatggcaggtactggaccatgtggaagctgcccat 418 Query: 380 gttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagta 439 |||||| ||||| |||||||| ||||||||||| ||| | ||||||| |||||||| ||| Sbjct: 419 gttcgggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaagaaggcgta 478 Query: 440 ccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcag 499 |||||| || | ||||| |||||||| ||||||||| | | ||||||||| | |||| Sbjct: 479 ccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgcagctcatcag 538 Query: 500 cttcatcgccttcaagccaccaggctgcgaggagtc 535 ||||||||||| |||||| || |||||||||||||| Sbjct: 539 cttcatcgcctacaagcccccgggctgcgaggagtc 574
>dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS1139 Length = 830 Score = 412 bits (208), Expect = e-112 Identities = 440/516 (85%), Gaps = 1/516 (0%) Strand = Plus / Plus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||||||| ||||| ||||| |||||||||||| |||||||||| |||||||||||||| Sbjct: 55 atggccccctccgtg-atggcgtcgtcggccaccaccgtcgctcccttccaggggctcaa 113 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 ||||||||||||| | |||||| ||||||||| | | ||| |||||| |||||| Sbjct: 114 gtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcag 173 Query: 140 caacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcga 199 ||| || || |||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 174 caatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcga 233 Query: 200 gaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacct 259 |||||| || ||| ||||||| |||| | ||||| |||||| |||||| |||| ||||| Sbjct: 234 gaccctctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacct 293 Query: 260 gatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtga 319 | |||| |||||||||||||| |||||||||||||||||||| || ||| ||| |||||| Sbjct: 294 gctccgttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgtctaccgtga 353 Query: 320 gcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctat 379 | || || ||| || || |||||||||||| |||||||||| |||||||||||||| || Sbjct: 354 gaaccacagatcccccggatactacgatggcaggtactggaccatgtggaagctgcccat 413 Query: 380 gttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagta 439 |||||| ||||| |||||||| ||||||||||| ||| | ||||||| |||||||| ||| Sbjct: 414 gttcgggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaagaaggcgta 473 Query: 440 ccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcag 499 |||||| || | ||||| |||||||| ||||||||| | | ||||||||| | |||| Sbjct: 474 ccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgcagctcatcag 533 Query: 500 cttcatcgccttcaagccaccaggctgcgaggagtc 535 ||||||||||| |||||| || |||||||||||||| Sbjct: 534 cttcatcgcctacaagcccccgggctgcgaggagtc 569
>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 593 Score = 410 bits (207), Expect = e-111 Identities = 335/375 (89%), Gaps = 2/375 (0%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||| ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 219 caggtatggccgattgagggcatcaagaagttcgagaccctgtcttacctgccaccactc 278 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 |||||||||||| |||||| | |||| | ||||||||||||||||||| || ||| Sbjct: 279 tcagaggaggccctcctgaagcagattgacttcttgatccgctccaagtgggttccctgc 338 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 343 |||||||||||||||||||| ||||||||||| |||||| | ||| |||| || ||||| Sbjct: 339 ctcgagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctcccggatacta 397 Query: 344 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 403 ||||||| ||||||||||||||||||||||||| |||||||| ||||| || ||| |||| Sbjct: 398 cgatggcaggtactggacaatgtggaagctgcccatgttcggctgcactgatgcctcaca 457 Query: 404 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 463 |||| |||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 458 ggtgatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgttcgcatcat 517 Query: 464 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 523 ||| ||||||||||| || || ||||||||||||||||||||||| |||||||||||||| Sbjct: 518 cggcttcgacaacatccgccaagtgcagtgcgtcagcttcatcgcattcaagccaccagg 577 Query: 524 ctgcgaggagtccgg 538 ||||||||| ||||| Sbjct: 578 ctgcgaggaatccgg 592 Score = 95.6 bits (48), Expect = 2e-16 Identities = 113/134 (84%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| || ||||||||||| ||||| || |||||||| ||||||||||| || ||||| Sbjct: 4 atggcttcttcggccacctctgtcgccccattccagggcctcaagtccactgctggcctt 63 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 ||||||||||| ||| | | ||| |||| ||||||||||||||||||||||| ||| Sbjct: 64 cccgtcagccgtcgc---agcaatgcgggccttggcagcgtcagcaacggtggaagaatc 120 Query: 156 aggtgcatgcaggt 169 || ||||||||||| Sbjct: 121 agatgcatgcaggt 134
>dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full insert sequence Length = 2409 Score = 404 bits (204), Expect = e-109 Identities = 426/500 (85%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||| | Sbjct: 73 atggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtccaccgccggcatg 132 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 |||||| ||||||||| | | ||| |||||| ||||||||| || || |||||| Sbjct: 133 cccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaatggcggcaggatc 192 Query: 156 aggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttg 215 |||||||||||||||||||| || |||||||||||||||||||||||||| || ||| || Sbjct: 193 aggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctg 252 Query: 216 ccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgg 275 ||||| |||| | ||||| |||||| |||||| |||| |||||| |||| ||||||||| Sbjct: 253 ccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgctccgttccaagtgg 312 Query: 276 gtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcct 335 ||||| |||||||||||||||||||| || ||| ||| ||||||| || || ||| || Sbjct: 313 gtgccctgcctcgagttcagcaaggtcggattcgtctaccgtgagaaccacagatccccc 372 Query: 336 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 || |||||||||||| |||||||||| |||||||||||||| |||||||| ||||| ||| Sbjct: 373 ggatactacgatggcaggtactggaccatgtggaagctgcccatgttcgggtgcactgac 432 Query: 396 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 455 ||||| ||||||||||| ||| | ||||||| |||||||| ||||||||| || | ||| Sbjct: 433 gccacccaggtgctcaaggagctcgaggaggccaagaaggcgtaccctgatgcattcgtc 492 Query: 456 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 515 || |||||||| ||||||||| | | ||||||||| | ||||||||||||||| |||| Sbjct: 493 cgtatcatcggcttcgacaacgtcaggcaggtgcagctcatcagcttcatcgcctacaag 552 Query: 516 ccaccaggctgcgaggagtc 535 || || |||||||||||||| Sbjct: 553 cccccgggctgcgaggagtc 572
>gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 854 Score = 396 bits (200), Expect = e-107 Identities = 438/516 (84%), Gaps = 1/516 (0%) Strand = Plus / Plus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||||||| ||||| ||||| |||||||||||| |||||||||| |||||||||||||| Sbjct: 83 atggccccctccgtg-atggcgtcgtcggccaccaccgtcgctcccttccaggggctcaa 141 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 ||||||||||||| | |||||| ||||||||| | | ||| |||||| |||||| Sbjct: 142 gtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcag 201 Query: 140 caacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcga 199 ||| || || |||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 202 caatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcga 261 Query: 200 gaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacct 259 |||||| |||||| ||||||| |||| | ||||| |||||| |||||| |||| ||||| Sbjct: 262 gaccctctcttacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacct 321 Query: 260 gatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtga 319 |||| |||||||||||||| |||||||||||||||||||| || || ||| |||||| Sbjct: 322 cctccgttccaagtgggtgccctgcctcgagttcagcaaggtcggatttgtctaccgtga 381 Query: 320 gcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctat 379 | || || ||| || || |||||||||||| |||||||||| |||||||||||||| || Sbjct: 382 gaaccacagatcccccggatactacgatggcaggtactggaccatgtggaagctgcccat 441 Query: 380 gttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagta 439 |||||| ||||| |||||||| ||||||||||| ||| | ||||||| |||||||| ||| Sbjct: 442 gttcgggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaagaaggcgta 501 Query: 440 ccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcag 499 |||||| || | ||||| |||||||| ||||||||| | | ||||||||| | |||| Sbjct: 502 ccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgcagctcatcag 561 Query: 500 cttcatcgccttcaagccaccaggctgcgaggagtc 535 ||||||||||| |||||| || |||||||| ||||| Sbjct: 562 cttcatcgcctacaagcccccgggctgcgaagagtc 597
>dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS2106 Length = 895 Score = 394 bits (199), Expect = e-106 Identities = 440/519 (84%), Gaps = 1/519 (0%) Strand = Plus / Plus Query: 17 gctatggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggct 76 |||||||||||||||||| |||||||| |||||||||||||| ||||| ||||| ||||| Sbjct: 64 gctatggcccccaccgtg-atggcctcctcggccacctccgtggctccattccaagggct 122 Query: 77 caagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgt 136 ||||||||||||||| |||||||||||||||||||| | | | || |||||| ||| Sbjct: 123 caagtccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgt 182 Query: 137 cagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagtt 196 |||||| || |||||||||| || ||||||||||||||| || ||||||||||||||||| Sbjct: 183 cagcaatggcggaaggatcaagttcatgcaggtgtggccaattgagggcatcaagaagtt 242 Query: 197 cgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgacta 256 ||||||||| || ||| |||||||||||| | ||||| || | |||||| |||| || Sbjct: 243 cgagaccctatcgtacctgccaccactcaccgtggaggatcttttgaagcagatcgagta 302 Query: 257 cctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccg 316 |||| | || |||||||||||||||||||||||||||||||||||||| ||| ||| ||| Sbjct: 303 cctgcttcgatccaagtgggtgccttgcctcgagttcagcaaggttggattcgtctaccg 362 Query: 317 tgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcc 376 ||| || || ||||| ||||||||||||||| |||| ||||| |||||||||||||| Sbjct: 363 cgagaaccacaggtctcccgggtactacgatggcaggtattggaccatgtggaagctgcc 422 Query: 377 tatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaagga 436 |||||||| |||||||| ||||| ||||||||||| ||| | ||||||| |||||||| Sbjct: 423 catgttcggctgcaccgatgccacccaggtgctcaaggagctcgaggaggccaagaaggc 482 Query: 437 gtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgt 496 ||||| || || | | |||| |||||||| ||||||||| | | |||||||||| | Sbjct: 483 ctaccccgatgcctttatccgtatcatcggcttcgacaacgtcaggcaggtgcagttgat 542 Query: 497 cagcttcatcgccttcaagccaccaggctgcgaggagtc 535 ||||||||||||| |||||| ||||| ||||||||||| Sbjct: 543 tagcttcatcgcctacaagcccccaggttgcgaggagtc 581
>gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 835 Score = 389 bits (196), Expect = e-105 Identities = 437/516 (84%), Gaps = 1/516 (0%) Strand = Plus / Plus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||||||| ||||| ||||| |||||||||||| |||||||||| |||||||||||||| Sbjct: 46 atggccccctccgtg-atggcgtcgtcggccaccaccgtcgctcccttccaggggctcaa 104 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 ||||||||||||| | |||||| ||||||||| | | ||| |||||| |||||| Sbjct: 105 gtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcag 164 Query: 140 caacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcga 199 ||| || || |||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 165 caatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcga 224 Query: 200 gaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacct 259 |||||| || ||| ||||||| |||| | ||||| |||||| |||||| |||| ||||| Sbjct: 225 gaccctctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacct 284 Query: 260 gatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtga 319 | |||| |||||||||||||| |||||||||||||||||||| || ||| ||| |||||| Sbjct: 285 gctccgttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgtctaccgtga 344 Query: 320 gcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctat 379 | || || ||| || || || ||||||||| |||||||||| |||||||||||||| || Sbjct: 345 gaaccacagatcccccggatattacgatggcaggtactggaccatgtggaagctgcccat 404 Query: 380 gttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagta 439 |||||| ||||| |||||||| ||||||||||| ||| | ||||||| |||||||| | | Sbjct: 405 gttcgggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaagaaggcgaa 464 Query: 440 ccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcag 499 |||||| || | ||||| |||||||| ||||||||| | | ||||||||| | |||| Sbjct: 465 ccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgcagctcatcag 524 Query: 500 cttcatcgccttcaagccaccaggctgcgaggagtc 535 |||||||||| |||||| || |||||||||||||| Sbjct: 525 tttcatcgcctacaagcccccgggctgcgaggagtc 560
>gb|AF017363.1|AF017363 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 918 Score = 357 bits (180), Expect = 3e-95 Identities = 391/460 (85%), Gaps = 1/460 (0%) Strand = Plus / Plus Query: 17 gctatggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggct 76 ||||||| |||||||||| |||||||| |||||||||||||| ||||| ||||| ||||| Sbjct: 50 gctatgggccccaccgtg-atggcctcctcggccacctccgtggctccattccaagggct 108 Query: 77 caagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgt 136 ||||||||||||||| |||||||||||||||||||| | | | || |||||| ||| Sbjct: 109 caagtccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgt 168 Query: 137 cagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagtt 196 |||||| || |||||||||| |||||||||||||||||| || ||||||||||||||||| Sbjct: 169 cagcaatggcggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagtt 228 Query: 197 cgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgacta 256 ||||||||| || ||| |||||||||||| | ||||| || | |||||| |||| || Sbjct: 229 cgagaccctatcgtacctgccaccactcaccgtggaggatcttttgaagcagatcgagta 288 Query: 257 cctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccg 316 |||| | || ||||||||||||||||| |||||||||||||||||||||||| ||| ||| Sbjct: 289 cctgcttcgatccaagtgggtgccttgtctcgagttcagcaaggttgggttcgtctaccg 348 Query: 317 tgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcc 376 |||| || || ||||| || |||||||||||| |||| ||||| |||||||||||||| Sbjct: 349 tgagaaccacaggtctcccggatactacgatggcaggtattggaccatgtggaagctgcc 408 Query: 377 tatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaagga 436 |||||||| |||||||| ||||| ||||||||||| || | || || | |||||||| Sbjct: 409 catgttcggctgcaccgatgccacccaggtgctcaaggaactcgaagatgccaagaaggc 468 Query: 437 gtaccctgacgcgtatgtccgcatcatcggattcgacaac 476 |||||||| || | |||||| |||||||| ||||||||| Sbjct: 469 ctaccctgatgcctttgtccgtatcatcggcttcgacaac 508
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 305 bits (154), Expect = 1e-79 Identities = 316/370 (85%) Strand = Plus / Minus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 225 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 10080152 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 10080093 Query: 226 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 285 | ||||| |||||| |||||| |||| |||||| |||| |||||||||||||| |||| Sbjct: 10080092 ccgtggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcc 10080033 Query: 286 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacg 345 |||||||||||||||| || ||| ||| ||||||| || || ||| || || ||||||| Sbjct: 10080032 tcgagttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacg 10079973 Query: 346 atggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacagg 405 ||||| |||||||||| |||||||||||||| |||||||| ||||| |||||||| |||| Sbjct: 10079972 atggcaggtactggaccatgtggaagctgcccatgttcgggtgcactgacgccacccagg 10079913 Query: 406 tgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcg 465 ||||||| ||| | ||||||| |||||||| ||||||||| || | ||||| ||||||| Sbjct: 10079912 tgctcaaggagctcgaggaggccaagaaggcgtaccctgatgcattcgtccgtatcatcg 10079853 Query: 466 gattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggct 525 | ||||||||| | | ||||||||| | ||||||||||||||| |||||| || |||| Sbjct: 10079852 gcttcgacaacgtcaggcaggtgcagctcatcagcttcatcgcctacaagcccccgggct 10079793 Query: 526 gcgaggagtc 535 |||||||||| Sbjct: 10079792 gcgaggagtc 10079783 Score = 283 bits (143), Expect = 4e-73 Identities = 314/371 (84%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || |||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 11261928 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccaccactc 11261987 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 | | ||||| || | |||||| |||| |||||| | || |||||||||||||||||| Sbjct: 11261988 accgtggaggatcttttgaagcagatcgagtacctgcttcgatccaagtgggtgccttgc 11262047 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||| ||||||| || || ||||| ||||||||| Sbjct: 11262048 ctcgagttcagcaaggttggattcgtctaccgtgagaaccacaggtctcccgggtactac 11262107 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 |||||| |||| ||||| |||||||||||||| |||||||| |||||||| ||||| ||| Sbjct: 11262108 gatggcaggtattggaccatgtggaagctgcccatgttcggctgcaccgatgccacccag 11262167 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||| ||| | ||||||| |||||||| ||||| || || | |||||| |||||| Sbjct: 11262168 gtgctcaaggagctcgaggaggccaagaaggcctaccccgatgcctttgtccgtatcatc 11262227 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| | | |||||||||| | ||||||||||||| |||||| ||||| Sbjct: 11262228 ggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagcccccaggt 11262287 Query: 525 tgcgaggagtc 535 ||||||||||| Sbjct: 11262288 tgcgaggagtc 11262298 Score = 262 bits (132), Expect = 1e-66 Identities = 315/376 (83%) Strand = Plus / Plus Query: 164 gcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccact 223 |||||||||||| || || |||||||||||||| ||||||||||| ||| ||||||| || Sbjct: 11276590 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccaccgct 11276649 Query: 224 cagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttg 283 || |||| |||| | |||||| |||| |||||| |||| ||||| ||||||||||| Sbjct: 11276650 cacggtcgaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgccttg 11276709 Query: 284 cctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtacta 343 ||||||||| || ||||| |||||| ||| ||||||| || || |||||||||||||| Sbjct: 11276710 cctcgagtttagtaaggtcgggttcgtctaccgtgagaaccacaggtctcctgggtacta 11276769 Query: 344 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 403 |||||| |||||||||| ||||||||||||||||||||||||||||| || ||||| || Sbjct: 11276770 tgatggcaggtactggaccatgtggaagctgcctatgttcggatgcactgatgccaccca 11276829 Query: 404 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 463 ||||||||| ||| | ||||||| |||||||| || || || || | ||| |||||||| Sbjct: 11276830 ggtgctcaaggagctcgaggaggccaagaaggcatatccagatgcatttgttcgcatcat 11276889 Query: 464 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 523 ||| ||||||||| | | |||||||||| | ||||||||||||| |||||| || || Sbjct: 11276890 cggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagcccccggg 11276949 Query: 524 ctgcgaggagtccggc 539 ||||||||||||||| Sbjct: 11276950 ttgcgaggagtccggc 11276965 Score = 186 bits (94), Expect = 6e-44 Identities = 137/150 (91%), Gaps = 1/150 (0%) Strand = Plus / Plus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 11276330 atggcgcccaccgtg-atggcctcgtcggccacctccgttgctcccttccaggggctcaa 11276388 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 ||||||||||| |||||||||||||||||||| ||| | || |||||||||||||||| Sbjct: 11276389 atccaccgccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgtcag 11276448 Query: 140 caacggtggaaggatcaggtgcatgcaggt 169 |||||||||||||||||| || |||||||| Sbjct: 11276449 caacggtggaaggatcagctgtatgcaggt 11276478 Score = 157 bits (79), Expect = 5e-35 Identities = 298/371 (80%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| ||| | Sbjct: 11319738 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgccgccattg 11319797 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 | ||||| ||| | |||||| |||| |||||| |||| || ||||||||||||||| Sbjct: 11319798 acagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtgggtgccttgc 11319857 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 | |||||||||||||| || ||| ||| ||||||| | || ||| || || ||||| Sbjct: 11319858 ttggagttcagcaaggtcggattcgtctaccgtgagaatcacagatcacccggatactat 11319917 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || |||||||||| |||||||| ||||| ||||| ||||||||||| ||||| || Sbjct: 11319918 gacggtaggtactggaccatgtggaaactgcccatgtttggatgcaccgatgccacccaa 11319977 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||| ||| | ||||||| ||||||| |||||||| || | || |||||||| Sbjct: 11319978 gtgctcaaggagctcgaggaggcaaagaaggcataccctgatgccttcgttcgcatcatt 11320037 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || || |||||| | | |||||||||| ||||||||||||| | |||||||| || Sbjct: 11320038 ggctttgacaacgttaggcaggtgcagttaatcagcttcatcgcgtataagccaccgggt 11320097 Query: 525 tgcgaggagtc 535 ||||||||||| Sbjct: 11320098 tgcgaggagtc 11320108 Score = 145 bits (73), Expect = 2e-31 Identities = 134/153 (87%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 17 gctatggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggct 76 |||||||||||||||||| |||||||| |||||||||||||| ||||| ||||| ||||| Sbjct: 11261670 gctatggcccccaccgtg-atggcctcctcggccacctccgtggctccattccaagggct 11261728 Query: 77 caagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgt 136 ||||||||||||||| |||||||||||||||||||| | | | || |||||| ||| Sbjct: 11261729 caagtccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgt 11261788 Query: 137 cagcaacggtggaaggatcaggtgcatgcaggt 169 |||||| || |||||||||| |||||||||||| Sbjct: 11261789 cagcaatggcggaaggatcaagtgcatgcaggt 11261821 Score = 115 bits (58), Expect = 2e-22 Identities = 128/150 (85%), Gaps = 1/150 (0%) Strand = Plus / Minus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||||||| ||||| ||||| |||||||||||| |||||||||| |||||||||||||| Sbjct: 10080400 atggccccctccgtg-atggcgtcgtcggccaccaccgtcgctcccttccaggggctcaa 10080342 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 ||||||||||||| | |||||| ||||||||| | | ||| |||||| |||||| Sbjct: 10080341 gtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcag 10080282 Query: 140 caacggtggaaggatcaggtgcatgcaggt 169 ||| || || |||||||||||||||||||| Sbjct: 10080281 caatggcggcaggatcaggtgcatgcaggt 10080252 Score = 107 bits (54), Expect = 5e-20 Identities = 114/134 (85%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| ||||||||||||||||| ||||| |||||||||||||||||||| || |||||| Sbjct: 11319506 atggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggcctc 11319565 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 || || | ||||||||| | | | | ||| | |||| ||||||||| || ||||||||| Sbjct: 11319566 ccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaaggatc 11319625 Query: 156 aggtgcatgcaggt 169 || ||||||||||| Sbjct: 11319626 agatgcatgcaggt 11319639 Score = 99.6 bits (50), Expect = 1e-17 Identities = 62/66 (93%) Strand = Plus / Plus Query: 47 ggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctccccgtcagccg 106 |||||||||||| ||||| |||||||||||||||||||||||||||||||| || ||||| Sbjct: 11264737 ggccacctccgtggctccattccaggggctcaagtccaccgccggcctcccagtgagccg 11264796 Query: 107 ccgctc 112 |||||| Sbjct: 11264797 ccgctc 11264802 Score = 75.8 bits (38), Expect = 2e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 330 tctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgc 389 |||||||||||||| |||||| |||||||||| || ||||| ||||| |||||||| ||| Sbjct: 11266704 tctcctgggtactatgatggcaggtactggaccatatggaaactgcccatgttcggctgc 11266763 Query: 390 accgacgccacacaggtgctcaacgaggtggaggaggtcaagaagg 435 | |||| || |||||| |||| ||| | ||||||| |||||||| Sbjct: 11266764 agcgacaacagccaggtgatcaaggagctcgaggaggccaagaagg 11266809 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 617 gttttccttctccatttatc 636 |||||||||||||||||||| Sbjct: 4847860 gttttccttctccatttatc 4847879
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 305 bits (154), Expect = 1e-79 Identities = 316/370 (85%) Strand = Plus / Minus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 225 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 10080037 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 10079978 Query: 226 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 285 | ||||| |||||| |||||| |||| |||||| |||| |||||||||||||| |||| Sbjct: 10079977 ccgtggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcc 10079918 Query: 286 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacg 345 |||||||||||||||| || ||| ||| ||||||| || || ||| || || ||||||| Sbjct: 10079917 tcgagttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacg 10079858 Query: 346 atggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacagg 405 ||||| |||||||||| |||||||||||||| |||||||| ||||| |||||||| |||| Sbjct: 10079857 atggcaggtactggaccatgtggaagctgcccatgttcgggtgcactgacgccacccagg 10079798 Query: 406 tgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcg 465 ||||||| ||| | ||||||| |||||||| ||||||||| || | ||||| ||||||| Sbjct: 10079797 tgctcaaggagctcgaggaggccaagaaggcgtaccctgatgcattcgtccgtatcatcg 10079738 Query: 466 gattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggct 525 | ||||||||| | | ||||||||| | ||||||||||||||| |||||| || |||| Sbjct: 10079737 gcttcgacaacgtcaggcaggtgcagctcatcagcttcatcgcctacaagcccccgggct 10079678 Query: 526 gcgaggagtc 535 |||||||||| Sbjct: 10079677 gcgaggagtc 10079668 Score = 283 bits (143), Expect = 4e-73 Identities = 314/371 (84%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || |||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 11261599 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccaccactc 11261658 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 | | ||||| || | |||||| |||| |||||| | || |||||||||||||||||| Sbjct: 11261659 accgtggaggatcttttgaagcagatcgagtacctgcttcgatccaagtgggtgccttgc 11261718 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||| ||||||| || || ||||| ||||||||| Sbjct: 11261719 ctcgagttcagcaaggttggattcgtctaccgtgagaaccacaggtctcccgggtactac 11261778 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 |||||| |||| ||||| |||||||||||||| |||||||| |||||||| ||||| ||| Sbjct: 11261779 gatggcaggtattggaccatgtggaagctgcccatgttcggctgcaccgatgccacccag 11261838 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||| ||| | ||||||| |||||||| ||||| || || | |||||| |||||| Sbjct: 11261839 gtgctcaaggagctcgaggaggccaagaaggcctaccccgatgcctttgtccgtatcatc 11261898 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| | | |||||||||| | ||||||||||||| |||||| ||||| Sbjct: 11261899 ggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagcccccaggt 11261958 Query: 525 tgcgaggagtc 535 ||||||||||| Sbjct: 11261959 tgcgaggagtc 11261969 Score = 262 bits (132), Expect = 1e-66 Identities = 315/376 (83%) Strand = Plus / Plus Query: 164 gcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccact 223 |||||||||||| || || |||||||||||||| ||||||||||| ||| ||||||| || Sbjct: 11276261 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccaccgct 11276320 Query: 224 cagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttg 283 || |||| |||| | |||||| |||| |||||| |||| ||||| ||||||||||| Sbjct: 11276321 cacggtcgaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgccttg 11276380 Query: 284 cctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtacta 343 ||||||||| || ||||| |||||| ||| ||||||| || || |||||||||||||| Sbjct: 11276381 cctcgagtttagtaaggtcgggttcgtctaccgtgagaaccacaggtctcctgggtacta 11276440 Query: 344 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 403 |||||| |||||||||| ||||||||||||||||||||||||||||| || ||||| || Sbjct: 11276441 tgatggcaggtactggaccatgtggaagctgcctatgttcggatgcactgatgccaccca 11276500 Query: 404 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 463 ||||||||| ||| | ||||||| |||||||| || || || || | ||| |||||||| Sbjct: 11276501 ggtgctcaaggagctcgaggaggccaagaaggcatatccagatgcatttgttcgcatcat 11276560 Query: 464 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 523 ||| ||||||||| | | |||||||||| | ||||||||||||| |||||| || || Sbjct: 11276561 cggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagcccccggg 11276620 Query: 524 ctgcgaggagtccggc 539 ||||||||||||||| Sbjct: 11276621 ttgcgaggagtccggc 11276636 Score = 186 bits (94), Expect = 6e-44 Identities = 137/150 (91%), Gaps = 1/150 (0%) Strand = Plus / Plus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 11276001 atggcgcccaccgtg-atggcctcgtcggccacctccgttgctcccttccaggggctcaa 11276059 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 ||||||||||| |||||||||||||||||||| ||| | || |||||||||||||||| Sbjct: 11276060 atccaccgccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgtcag 11276119 Query: 140 caacggtggaaggatcaggtgcatgcaggt 169 |||||||||||||||||| || |||||||| Sbjct: 11276120 caacggtggaaggatcagctgtatgcaggt 11276149 Score = 157 bits (79), Expect = 5e-35 Identities = 298/371 (80%) Strand = Plus / Plus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| ||| | Sbjct: 11319409 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgccgccattg 11319468 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 | ||||| ||| | |||||| |||| |||||| |||| || ||||||||||||||| Sbjct: 11319469 acagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtgggtgccttgc 11319528 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 | |||||||||||||| || ||| ||| ||||||| | || ||| || || ||||| Sbjct: 11319529 ttggagttcagcaaggtcggattcgtctaccgtgagaatcacagatcacccggatactat 11319588 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || |||||||||| |||||||| ||||| ||||| ||||||||||| ||||| || Sbjct: 11319589 gacggtaggtactggaccatgtggaaactgcccatgtttggatgcaccgatgccacccaa 11319648 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||| ||| | ||||||| ||||||| |||||||| || | || |||||||| Sbjct: 11319649 gtgctcaaggagctcgaggaggcaaagaaggcataccctgatgccttcgttcgcatcatt 11319708 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || || |||||| | | |||||||||| ||||||||||||| | |||||||| || Sbjct: 11319709 ggctttgacaacgttaggcaggtgcagttaatcagcttcatcgcgtataagccaccgggt 11319768 Query: 525 tgcgaggagtc 535 ||||||||||| Sbjct: 11319769 tgcgaggagtc 11319779 Score = 145 bits (73), Expect = 2e-31 Identities = 134/153 (87%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 17 gctatggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggct 76 |||||||||||||||||| |||||||| |||||||||||||| ||||| ||||| ||||| Sbjct: 11261341 gctatggcccccaccgtg-atggcctcctcggccacctccgtggctccattccaagggct 11261399 Query: 77 caagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgt 136 ||||||||||||||| |||||||||||||||||||| | | | || |||||| ||| Sbjct: 11261400 caagtccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgt 11261459 Query: 137 cagcaacggtggaaggatcaggtgcatgcaggt 169 |||||| || |||||||||| |||||||||||| Sbjct: 11261460 cagcaatggcggaaggatcaagtgcatgcaggt 11261492 Score = 115 bits (58), Expect = 2e-22 Identities = 128/150 (85%), Gaps = 1/150 (0%) Strand = Plus / Minus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||||||| ||||| ||||| |||||||||||| |||||||||| |||||||||||||| Sbjct: 10080285 atggccccctccgtg-atggcgtcgtcggccaccaccgtcgctcccttccaggggctcaa 10080227 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 ||||||||||||| | |||||| ||||||||| | | ||| |||||| |||||| Sbjct: 10080226 gtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcag 10080167 Query: 140 caacggtggaaggatcaggtgcatgcaggt 169 ||| || || |||||||||||||||||||| Sbjct: 10080166 caatggcggcaggatcaggtgcatgcaggt 10080137 Score = 107 bits (54), Expect = 5e-20 Identities = 114/134 (85%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| ||||||||||||||||| ||||| |||||||||||||||||||| || |||||| Sbjct: 11319177 atggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggcctc 11319236 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 || || | ||||||||| | | | | ||| | |||| ||||||||| || ||||||||| Sbjct: 11319237 ccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaaggatc 11319296 Query: 156 aggtgcatgcaggt 169 || ||||||||||| Sbjct: 11319297 agatgcatgcaggt 11319310 Score = 99.6 bits (50), Expect = 1e-17 Identities = 62/66 (93%) Strand = Plus / Plus Query: 47 ggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctccccgtcagccg 106 |||||||||||| ||||| |||||||||||||||||||||||||||||||| || ||||| Sbjct: 11264408 ggccacctccgtggctccattccaggggctcaagtccaccgccggcctcccagtgagccg 11264467 Query: 107 ccgctc 112 |||||| Sbjct: 11264468 ccgctc 11264473 Score = 75.8 bits (38), Expect = 2e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 330 tctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgc 389 |||||||||||||| |||||| |||||||||| || ||||| ||||| |||||||| ||| Sbjct: 11266375 tctcctgggtactatgatggcaggtactggaccatatggaaactgcccatgttcggctgc 11266434 Query: 390 accgacgccacacaggtgctcaacgaggtggaggaggtcaagaagg 435 | |||| || |||||| |||| ||| | ||||||| |||||||| Sbjct: 11266435 agcgacaacagccaggtgatcaaggagctcgaggaggccaagaagg 11266480 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 617 gttttccttctccatttatc 636 |||||||||||||||||||| Sbjct: 4847841 gttttccttctccatttatc 4847860
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 305 bits (154), Expect = 1e-79 Identities = 316/370 (85%) Strand = Plus / Plus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 225 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 82469 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 82528 Query: 226 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 285 | ||||| |||||| |||||| |||| |||||| |||| |||||||||||||| |||| Sbjct: 82529 ccgtggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcc 82588 Query: 286 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacg 345 |||||||||||||||| || ||| ||| ||||||| || || ||| || || ||||||| Sbjct: 82589 tcgagttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacg 82648 Query: 346 atggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacagg 405 ||||| |||||||||| |||||||||||||| |||||||| ||||| |||||||| |||| Sbjct: 82649 atggcaggtactggaccatgtggaagctgcccatgttcgggtgcactgacgccacccagg 82708 Query: 406 tgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcg 465 ||||||| ||| | ||||||| |||||||| ||||||||| || | ||||| ||||||| Sbjct: 82709 tgctcaaggagctcgaggaggccaagaaggcgtaccctgatgcattcgtccgtatcatcg 82768 Query: 466 gattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggct 525 | ||||||||| | | ||||||||| | ||||||||||||||| |||||| || |||| Sbjct: 82769 gcttcgacaacgtcaggcaggtgcagctcatcagcttcatcgcctacaagcccccgggct 82828 Query: 526 gcgaggagtc 535 |||||||||| Sbjct: 82829 gcgaggagtc 82838 Score = 115 bits (58), Expect = 2e-22 Identities = 128/150 (85%), Gaps = 1/150 (0%) Strand = Plus / Plus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||||||| ||||| ||||| |||||||||||| |||||||||| |||||||||||||| Sbjct: 82221 atggccccctccgtg-atggcgtcgtcggccaccaccgtcgctcccttccaggggctcaa 82279 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 ||||||||||||| | |||||| ||||||||| | | ||| |||||| |||||| Sbjct: 82280 gtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcag 82339 Query: 140 caacggtggaaggatcaggtgcatgcaggt 169 ||| || || |||||||||||||||||||| Sbjct: 82340 caatggcggcaggatcaggtgcatgcaggt 82369
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 283 bits (143), Expect = 4e-73 Identities = 314/371 (84%) Strand = Plus / Minus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || |||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 110126 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccaccactc 110067 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 | | ||||| || | |||||| |||| |||||| | || |||||||||||||||||| Sbjct: 110066 accgtggaggatcttttgaagcagatcgagtacctgcttcgatccaagtgggtgccttgc 110007 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 |||||||||||||||||||| ||| ||| ||||||| || || ||||| ||||||||| Sbjct: 110006 ctcgagttcagcaaggttggattcgtctaccgtgagaaccacaggtctcccgggtactac 109947 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 |||||| |||| ||||| |||||||||||||| |||||||| |||||||| ||||| ||| Sbjct: 109946 gatggcaggtattggaccatgtggaagctgcccatgttcggctgcaccgatgccacccag 109887 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||| ||| | ||||||| |||||||| ||||| || || | |||||| |||||| Sbjct: 109886 gtgctcaaggagctcgaggaggccaagaaggcctaccccgatgcctttgtccgtatcatc 109827 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || ||||||||| | | |||||||||| | ||||||||||||| |||||| ||||| Sbjct: 109826 ggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagcccccaggt 109767 Query: 525 tgcgaggagtc 535 ||||||||||| Sbjct: 109766 tgcgaggagtc 109756 Score = 262 bits (132), Expect = 1e-66 Identities = 315/376 (83%) Strand = Plus / Minus Query: 164 gcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccact 223 |||||||||||| || || |||||||||||||| ||||||||||| ||| ||||||| || Sbjct: 95464 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccaccgct 95405 Query: 224 cagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttg 283 || |||| |||| | |||||| |||| |||||| |||| ||||| ||||||||||| Sbjct: 95404 cacggtcgaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgccttg 95345 Query: 284 cctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtacta 343 ||||||||| || ||||| |||||| ||| ||||||| || || |||||||||||||| Sbjct: 95344 cctcgagtttagtaaggtcgggttcgtctaccgtgagaaccacaggtctcctgggtacta 95285 Query: 344 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 403 |||||| |||||||||| ||||||||||||||||||||||||||||| || ||||| || Sbjct: 95284 tgatggcaggtactggaccatgtggaagctgcctatgttcggatgcactgatgccaccca 95225 Query: 404 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcat 463 ||||||||| ||| | ||||||| |||||||| || || || || | ||| |||||||| Sbjct: 95224 ggtgctcaaggagctcgaggaggccaagaaggcatatccagatgcatttgttcgcatcat 95165 Query: 464 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccagg 523 ||| ||||||||| | | |||||||||| | ||||||||||||| |||||| || || Sbjct: 95164 cggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagcccccggg 95105 Query: 524 ctgcgaggagtccggc 539 ||||||||||||||| Sbjct: 95104 ttgcgaggagtccggc 95089 Score = 186 bits (94), Expect = 6e-44 Identities = 137/150 (91%), Gaps = 1/150 (0%) Strand = Plus / Minus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 95724 atggcgcccaccgtg-atggcctcgtcggccacctccgttgctcccttccaggggctcaa 95666 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 ||||||||||| |||||||||||||||||||| ||| | || |||||||||||||||| Sbjct: 95665 atccaccgccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgtcag 95606 Query: 140 caacggtggaaggatcaggtgcatgcaggt 169 |||||||||||||||||| || |||||||| Sbjct: 95605 caacggtggaaggatcagctgtatgcaggt 95576 Score = 157 bits (79), Expect = 5e-35 Identities = 298/371 (80%) Strand = Plus / Minus Query: 165 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 224 ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| ||| | Sbjct: 52316 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgccgccattg 52257 Query: 225 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 284 | ||||| ||| | |||||| |||| |||||| |||| || ||||||||||||||| Sbjct: 52256 acagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtgggtgccttgc 52197 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 | |||||||||||||| || ||| ||| ||||||| | || ||| || || ||||| Sbjct: 52196 ttggagttcagcaaggtcggattcgtctaccgtgagaatcacagatcacccggatactat 52137 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || || |||||||||| |||||||| ||||| ||||| ||||||||||| ||||| || Sbjct: 52136 gacggtaggtactggaccatgtggaaactgcccatgtttggatgcaccgatgccacccaa 52077 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 |||||||| ||| | ||||||| ||||||| |||||||| || | || |||||||| Sbjct: 52076 gtgctcaaggagctcgaggaggcaaagaaggcataccctgatgccttcgttcgcatcatt 52017 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggc 524 || || |||||| | | |||||||||| ||||||||||||| | |||||||| || Sbjct: 52016 ggctttgacaacgttaggcaggtgcagttaatcagcttcatcgcgtataagccaccgggt 51957 Query: 525 tgcgaggagtc 535 ||||||||||| Sbjct: 51956 tgcgaggagtc 51946 Score = 145 bits (73), Expect = 2e-31 Identities = 134/153 (87%), Gaps = 1/153 (0%) Strand = Plus / Minus Query: 17 gctatggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggct 76 |||||||||||||||||| |||||||| |||||||||||||| ||||| ||||| ||||| Sbjct: 110384 gctatggcccccaccgtg-atggcctcctcggccacctccgtggctccattccaagggct 110326 Query: 77 caagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgt 136 ||||||||||||||| |||||||||||||||||||| | | | || |||||| ||| Sbjct: 110325 caagtccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgt 110266 Query: 137 cagcaacggtggaaggatcaggtgcatgcaggt 169 |||||| || |||||||||| |||||||||||| Sbjct: 110265 cagcaatggcggaaggatcaagtgcatgcaggt 110233 Score = 107 bits (54), Expect = 5e-20 Identities = 114/134 (85%) Strand = Plus / Minus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| ||||||||||||||||| ||||| |||||||||||||||||||| || |||||| Sbjct: 52548 atggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggcctc 52489 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 || || | ||||||||| | | | | ||| | |||| ||||||||| || ||||||||| Sbjct: 52488 ccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaaggatc 52429 Query: 156 aggtgcatgcaggt 169 || ||||||||||| Sbjct: 52428 agatgcatgcaggt 52415 Score = 99.6 bits (50), Expect = 1e-17 Identities = 62/66 (93%) Strand = Plus / Minus Query: 47 ggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctccccgtcagccg 106 |||||||||||| ||||| |||||||||||||||||||||||||||||||| || ||||| Sbjct: 107317 ggccacctccgtggctccattccaggggctcaagtccaccgccggcctcccagtgagccg 107258 Query: 107 ccgctc 112 |||||| Sbjct: 107257 ccgctc 107252 Score = 75.8 bits (38), Expect = 2e-10 Identities = 89/106 (83%) Strand = Plus / Minus Query: 330 tctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgc 389 |||||||||||||| |||||| |||||||||| || ||||| ||||| |||||||| ||| Sbjct: 105350 tctcctgggtactatgatggcaggtactggaccatatggaaactgcccatgttcggctgc 105291 Query: 390 accgacgccacacaggtgctcaacgaggtggaggaggtcaagaagg 435 | |||| || |||||| |||| ||| | ||||||| |||||||| Sbjct: 105290 agcgacaacagccaggtgatcaaggagctcgaggaggccaagaagg 105245
>gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase small subunit mRNA, clone pTS406, 3' end Length = 317 Score = 281 bits (142), Expect = 1e-72 Identities = 160/166 (96%) Strand = Plus / Plus Query: 482 tcaggtgcagtgcgtcagcttcatcgccttcaagccaccaggctgcgaggagtccggcaa 541 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1 tcaggtgcagtgcgtcagcttcatcgccttcaagccaccgggctgcgaggagtccggcaa 60 Query: 542 ggcataaacagctcactgacgatgggccacatataaagtgccattgcagttttgtcaact 601 ||| ||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| Sbjct: 61 ggcctaaacagctcactcacgacaggccatatataaagtgccattgcagttttgtcaact 120 Query: 602 ctgacattgctttgggttttccttctccatttatctttcttatttg 647 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ctgacattgctttgggttttccttctccatttatctttcttatttg 166
>dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N11, full insert sequence Length = 845 Score = 254 bits (128), Expect = 3e-64 Identities = 407/500 (81%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| ||||||||||||||||| ||||| |||||||||||||||||||| || |||||| Sbjct: 80 atggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggcctc 139 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 || || | ||||||||| | | | | ||| | |||| ||||||||| || ||||||||| Sbjct: 140 ccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaaggatc 199 Query: 156 aggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttg 215 || ||||||||||||||||| || |||||||| |||||||||||||| ||||| |||||| Sbjct: 200 agatgcatgcaggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttg 259 Query: 216 ccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgg 275 || ||| | | ||||| ||| | |||||| |||| |||||| |||| || |||||| Sbjct: 260 ccgccattgacagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtgg 319 Query: 276 gtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcct 335 ||||||||| | |||||||||||||| || ||| ||| ||||||| | || ||| || Sbjct: 320 gtgccttgcttggagttcagcaaggtcggattcgtctaccgtgagaatcacagatcaccc 379 Query: 336 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 || ||||| || || |||||||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 380 ggatactatgacggtaggtactggaccatgtggaaactgcccatgtttggatgcaccgat 439 Query: 396 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 455 ||||| || |||||||| ||| | ||||||| ||||||| |||||||| || | || Sbjct: 440 gccacccaagtgctcaaggagctcgaggaggcaaagaaggcataccctgatgccttcgtt 499 Query: 456 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 515 |||||||| || || |||||| | | |||||||||| ||||||||||||| | ||| Sbjct: 500 cgcatcattggctttgacaacgttaggcaggtgcagttaatcagcttcatcgcgtataag 559 Query: 516 ccaccaggctgcgaggagtc 535 ||||| || ||||||||||| Sbjct: 560 ccaccgggttgcgaggagtc 579
>dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A10, full insert sequence Length = 1999 Score = 254 bits (128), Expect = 3e-64 Identities = 407/500 (81%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 ||||| ||||||||||||||||| ||||| |||||||||||||||||||| || |||||| Sbjct: 82 atggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggcctc 141 Query: 96 cccgtcagccgccgctcgaacggtgctagcctcggcagcgtcagcaacggtggaaggatc 155 || || | ||||||||| | | | | ||| | |||| ||||||||| || ||||||||| Sbjct: 142 ccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaaggatc 201 Query: 156 aggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttg 215 || ||||||||||||||||| || |||||||| |||||||||||||| ||||| |||||| Sbjct: 202 agatgcatgcaggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttg 261 Query: 216 ccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgg 275 || ||| | | ||||| ||| | |||||| |||| |||||| |||| || |||||| Sbjct: 262 ccgccattgacagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtgg 321 Query: 276 gtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcct 335 ||||||||| | |||||||||||||| || ||| ||| ||||||| | || ||| || Sbjct: 322 gtgccttgcttggagttcagcaaggtcggattcgtctaccgtgagaatcacagatcaccc 381 Query: 336 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 || ||||| || || |||||||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 382 ggatactatgacggtaggtactggaccatgtggaaactgcccatgtttggatgcaccgat 441 Query: 396 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 455 ||||| || |||||||| ||| | ||||||| ||||||| |||||||| || | || Sbjct: 442 gccacccaagtgctcaaggagctcgaggaggcaaagaaggcataccctgatgccttcgtt 501 Query: 456 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 515 |||||||| || || |||||| | | |||||||||| ||||||||||||| | ||| Sbjct: 502 cgcatcattggctttgacaacgttaggcaggtgcagttaatcagcttcatcgcgtataag 561 Query: 516 ccaccaggctgcgaggagtc 535 ||||| || ||||||||||| Sbjct: 562 ccaccgggttgcgaggagtc 581
>emb|X07515.1|OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1110 Score = 226 bits (114), Expect = 7e-56 Identities = 290/346 (83%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 225 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 492 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 551 Query: 226 gcacggaggccctccttaagcaggtcgactacct-gatccgctccaagtgggtgccttgc 284 | ||||| |||||| |||||| |||| ||||| | |||| ||||||||| |||| ||| Sbjct: 552 ccgtggaggacctcctgaagcagatcgagtacctagctccgttccaagtgg-tgccctgc 610 Query: 285 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 344 ||||||||||||||||| || || ||| ||||||| || || || ||||| |||||| Sbjct: 611 ctcgagttcagcaaggtcggatttgtctaccgtgagaaccacaagtcccctggatactac 670 Query: 345 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 404 || ||| |||||||||| |||||||||||||| |||||||| |||||||||||||| ||| Sbjct: 671 gacggcaggtactggaccatgtggaagctgcccatgttcgggtgcaccgacgccacccag 730 Query: 405 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatc 464 || |||| ||| | ||||||| |||||||| ||||||||| || | ||||| |||||| Sbjct: 731 gtcgtcaaggagctcgaggaggccaagaaggcgtaccctgatgcattcgtccgtatcatc 790 Query: 465 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgcct 510 || ||||||||| | | ||||||||| | ||||||||||||||| Sbjct: 791 ggcttcgacaacgttaggcaggtgcagctcatcagcttcatcgcct 836 Score = 81.8 bits (41), Expect = 3e-12 Identities = 67/73 (91%), Gaps = 2/73 (2%) Strand = Plus / Plus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||||||| ||||| ||||| |||||||||||| |||||||||| ||||| |||||||| Sbjct: 261 atggccccctccgtg-atggcgtcgtcggccaccaccgtcgctcccttcca-gggctcaa 318 Query: 80 gtccaccgccggc 92 ||||||||||||| Sbjct: 319 gtccaccgccggc 331
>emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit (RuBPC; EC 4.1.1.39) Length = 830 Score = 200 bits (101), Expect = 4e-48 Identities = 405/505 (80%), Gaps = 5/505 (0%) Strand = Plus / Plus Query: 15 cagctatggcccccaccgtgn--atggcctcgtcggccacctccgtcgctcctttccagg 72 |||| ||||| ||||||||| |||||||||||||||||| |||||||||| ||||||| Sbjct: 61 cagccatggcgcccaccgtgatgatggcctcgtcggccaccgccgtcgctccgttccagg 120 Query: 73 ggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggca 132 ||||||||||||||||| ||||||||||| ||||||||| | | |||||||||| Sbjct: 121 ggctcaagtccaccgccagcctccccgtcgcccgccgctcctccag---aagcctcggca 177 Query: 133 gcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaaga 192 |||||||||||| ||||||||| ||||||||||||||||||| | | |||| ||||| Sbjct: 178 acgtcagcaacggcggaaggatccggtgcatgcaggtgtggccggcctacggcaacaaga 237 Query: 193 agttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcg 252 |||||||||| ||||| ||| |||| || || ||||| | ||| || |||||||| | Sbjct: 238 agttcgagacgctgtcgtacctgccgccgctgtcgacggacgacctgctgaagcaggtgg 297 Query: 253 actacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatct 312 |||||||| | ||| | ||| | || |||||||||||||||||||| || ||| | | Sbjct: 298 actacctgctgcgcaacggctggataccctgcctcgagttcagcaaggtcggcttcgtgt 357 Query: 313 tccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagc 372 ||| ||| || | | || || | |||||||| ||||| |||||||| |||||||||| Sbjct: 358 accgcgagaactccacctccccgtgctactacgacggccgctactggaccatgtggaagc 417 Query: 373 tgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaaga 432 |||| |||||||| |||| ||||||||| |||||| ||| ||| || |||||| || | Sbjct: 418 tgcccatgttcggctgcaacgacgccacccaggtgtacaaggagctgcaggaggccatca 477 Query: 433 aggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagt 492 | ||||| ||||| | |||| ||||||| ||||||||||| ||| ||||| Sbjct: 478 aatcctacccggacgccttccaccgcgtcatcggcttcgacaacatcaagcagacgcagt 537 Query: 493 gcgtcagcttcatcgccttcaagcc 517 |||||||||||||||||| |||||| Sbjct: 538 gcgtcagcttcatcgcctacaagcc 562
>dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small subunit, complete cds Length = 830 Score = 200 bits (101), Expect = 4e-48 Identities = 405/505 (80%), Gaps = 5/505 (0%) Strand = Plus / Plus Query: 15 cagctatggcccccaccgtgn--atggcctcgtcggccacctccgtcgctcctttccagg 72 |||| ||||| ||||||||| |||||||||||||||||| |||||||||| ||||||| Sbjct: 61 cagccatggcgcccaccgtgatgatggcctcgtcggccaccgccgtcgctccgttccagg 120 Query: 73 ggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggca 132 ||||||||||||||||| ||||||||||| ||||||||| | | |||||||||| Sbjct: 121 ggctcaagtccaccgccagcctccccgtcgcccgccgctcctccag---aagcctcggca 177 Query: 133 gcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaaga 192 |||||||||||| ||||||||| ||||||||||||||||||| | | |||| ||||| Sbjct: 178 acgtcagcaacggcggaaggatccggtgcatgcaggtgtggccggcctacggcaacaaga 237 Query: 193 agttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcg 252 |||||||||| ||||| ||| |||| || || ||||| | ||| || |||||||| | Sbjct: 238 agttcgagacgctgtcgtacctgccgccgctgtcgacggacgacctgctgaagcaggtgg 297 Query: 253 actacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatct 312 |||||||| | ||| | ||| | || |||||||||||||||||||| || ||| | | Sbjct: 298 actacctgctgcgcaacggctggataccctgcctcgagttcagcaaggtcggcttcgtgt 357 Query: 313 tccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagc 372 ||| ||| || | | || || | |||||||| ||||| |||||||| |||||||||| Sbjct: 358 accgcgagaactccacctccccgtgctactacgacggccgctactggaccatgtggaagc 417 Query: 373 tgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaaga 432 |||| |||||||| |||| ||||||||| |||||| ||| ||| || |||||| || | Sbjct: 418 tgcccatgttcggctgcaacgacgccacccaggtgtacaaggagctgcaggaggccatca 477 Query: 433 aggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagt 492 | ||||| ||||| | |||| ||||||| ||||||||||| ||| ||||| Sbjct: 478 aatcctacccggacgccttccaccgcgtcatcggcttcgacaacatcaagcagacgcagt 537 Query: 493 gcgtcagcttcatcgccttcaagcc 517 |||||||||||||||||| |||||| Sbjct: 538 gcgtcagcttcatcgcctacaagcc 562
>gb|AF008214.1|AF008214 Musa acuminata ribulose-1,5-bisphosphate carboxylase small subunit (rbcS1) mRNA, complete cds Length = 853 Score = 139 bits (70), Expect = 1e-29 Identities = 154/182 (84%) Strand = Plus / Plus Query: 336 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 417 gggtactacgacgggcggtactggaccatgtggaagctgcccatgttcgggtgcaccgac 476 Query: 396 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 455 || |||||| || |||||||||||| ||||||||||||||| |||| | || Sbjct: 477 gctgtgcaggtggcgaaggaggtggaggagtgcaagaaggagtacccccacgccttcatc 536 Query: 456 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 515 ||||||||||| |||||||||| || |||||||||||| |||| |||||||||| |||| Sbjct: 537 cgcatcatcggcttcgacaacaaccgccaggtgcagtgcatcagtttcatcgcctacaag 596 Query: 516 cc 517 || Sbjct: 597 cc 598 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 158 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 208 ||||||| |||||||||| ||||||||| | |||||||| ||||||||||| Sbjct: 239 gtgcatgaaggtgtggccgatcgagggcgtgaagaagtttgagaccctgtc 289
>emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1648 Score = 137 bits (69), Expect = 5e-29 Identities = 136/157 (86%), Gaps = 5/157 (3%) Strand = Plus / Plus Query: 15 cagctatggcccccaccgtgn--atggcctcgtcggccacctccgtcgctcctttccagg 72 |||| ||||| ||||||||| |||||||||||||||||| |||||||||| ||||||| Sbjct: 486 cagccatggcgcccaccgtgatgatggcctcgtcggccaccgccgtcgctccgttccagg 545 Query: 73 ggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggca 132 ||||||||||||||||| ||||||||||| ||||||||| | | |||||||||| Sbjct: 546 ggctcaagtccaccgccagcctccccgtcgcccgccgctcctccag---aagcctcggca 602 Query: 133 gcgtcagcaacggtggaaggatcaggtgcatgcaggt 169 |||||||||||| ||||||||| ||||||||||||| Sbjct: 603 acgtcagcaacggcggaaggatccggtgcatgcaggt 639 Score = 85.7 bits (43), Expect = 2e-13 Identities = 145/179 (81%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 |||||||| ||||| |||||||| |||||||||||||| |||||||| |||| ||||||| Sbjct: 969 tactacgacggccgctactggaccatgtggaagctgcccatgttcggctgcaacgacgcc 1028 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 || |||||| ||| ||| || |||||| || || ||||| ||||| | |||| Sbjct: 1029 acccaggtgtacaaggagctgcaggaggccatcaaatcctacccggacgccttccaccgc 1088 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 517 ||||||| ||||||||||| ||| ||||||||||||||||||||||| |||||| Sbjct: 1089 gtcatcggcttcgacaacatcaagcagacgcagtgcgtcagcttcatcgcctacaagcc 1147
>emb|X00137.1|LGRUBP Lemna gibba ribulose 1.5-bisphospate carboxylase small subunit (cDNA clone pLg ssu1) Length = 776 Score = 137 bits (69), Expect = 5e-29 Identities = 201/245 (82%) Strand = Plus / Plus Query: 273 tgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatct 332 ||||| || ||| |||||||| ||||| |||||| | | ||||||| ||||||| || Sbjct: 286 tgggttccctgcatcgagttctccaaggaggggttcgtgtaccgtgagaacaacgcgtcg 345 Query: 333 cctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcacc 392 || ||||||||||| || |||||||||| |||||||||||||| |||||||| |||||| Sbjct: 346 cccgggtactacgacgggaggtactggacgatgtggaagctgcccatgttcggctgcacc 405 Query: 393 gacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtat 452 ||||||| |||||| || |||||||||||||| |||||||| ||||| || | Sbjct: 406 gacgccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtatttc 465 Query: 453 gtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttc 512 ||| | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| | Sbjct: 466 gtcagaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctac 525 Query: 513 aagcc 517 ||||| Sbjct: 526 aagcc 530 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 159 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 214 ||||||||||||||||| |||||| | ||||||||||||||||| || ||||| Sbjct: 172 tgcatgcaggtgtggccgccggagggcctgaagaagttcgagaccctctcctactt 227
>emb|X17235.1|LGRBCS1 Lemna gibba rbcS mRNA SSU1 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 764 Score = 137 bits (69), Expect = 5e-29 Identities = 201/245 (82%) Strand = Plus / Plus Query: 273 tgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatct 332 ||||| || ||| |||||||| ||||| |||||| | | ||||||| ||||||| || Sbjct: 271 tgggttccctgcatcgagttctccaaggaggggttcgtgtaccgtgagaacaacgcgtcg 330 Query: 333 cctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcacc 392 || ||||||||||| || |||||||||| |||||||||||||| |||||||| |||||| Sbjct: 331 cccgggtactacgacgggaggtactggacgatgtggaagctgcccatgttcggctgcacc 390 Query: 393 gacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtat 452 ||||||| |||||| || |||||||||||||| |||||||| ||||| || | Sbjct: 391 gacgccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtatttc 450 Query: 453 gtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttc 512 ||| | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| | Sbjct: 451 gtcagaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctac 510 Query: 513 aagcc 517 ||||| Sbjct: 511 aagcc 515
>gb|AY103730.1| Zea mays PCO095823 mRNA sequence Length = 1172 Score = 133 bits (67), Expect = 8e-28 Identities = 313/395 (79%) Strand = Plus / Plus Query: 123 agcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgag 182 |||||||||| |||||||||||| ||||||||| ||||||||||||||||||| | | Sbjct: 288 agcctcggcaacgtcagcaacggcggaaggatccggtgcatgcaggtgtggccggcctac 347 Query: 183 ggcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctcctt 242 |||| ||||||||||||||| ||||| ||| |||| || || ||||| | ||| || Sbjct: 348 ggcaacaagaagttcgagacgctgtcgtacctgccgccgctgtcgacggacgacctgctg 407 Query: 243 aagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggtt 302 |||||||| ||||||||| | ||| | ||| | || |||||||||||||||||| | Sbjct: 408 aagcaggtggactacctgctgcgcaacggctggataccctgcctcgagttcagcaagctc 467 Query: 303 gggttcatcttccgtgagcacaacgcatctcctgggtactacgatggccggtactggaca 362 |||||| | | ||| ||| || | | || || | |||||||| ||||| |||||||| Sbjct: 468 gggttcgtgtaccgcgagaactccacctccccgtgctactacgacggccgctactggacc 527 Query: 363 atgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggag 422 |||||||||||||| |||||||| |||| ||||||||| |||||| ||| ||| || || Sbjct: 528 atgtggaagctgcccatgttcggctgcaacgacgccacccaggtgtacaaggagctgcag 587 Query: 423 gaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgt 482 |||| || || ||||| ||||| | |||| ||||||| ||||||||||| Sbjct: 588 gaggccatcaaatcctacccggacgccttccaccgcgtcatcggcttcgacaacatcaag 647 Query: 483 caggtgcagtgcgtcagcttcatcgccttcaagcc 517 ||| ||||||||||||||||||||||| |||||| Sbjct: 648 cagacgcagtgcgtcagcttcatcgcctacaagcc 682 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 |||||||||||||| ||| ||||||| || |||||||| ||||||||| ||||| ||||| Sbjct: 204 atggcctcgtcggcaaccgccgtcgccccgttccagggtctcaagtccgccgccagcctc 263 Query: 96 cccgtcagccgccgc 110 |||||| ||||||| Sbjct: 264 cccgtcgcccgccgc 278
>emb|X17234.1|LGRBCS4B Lemna gibba rbcS gene SSU40B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 131 bits (66), Expect = 3e-27 Identities = 153/182 (84%) Strand = Plus / Plus Query: 336 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 428 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcggctgcaccgac 487 Query: 396 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 455 |||| |||||| || |||||||||||||| |||||||| ||||| || | ||| Sbjct: 488 gccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtacttcgtc 547 Query: 456 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 515 | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| |||| Sbjct: 548 agaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctacaag 607 Query: 516 cc 517 || Sbjct: 608 cc 609 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Plus Query: 137 cagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagtt 196 ||||||||| || ||| | || ||||||||||||||||| |||||| | |||||||| Sbjct: 147 cagcaacggcggcagggttagctgcatgcaggtgtggccgccggagggcctgaagaagtt 206 Query: 197 cgagaccct 205 ||||||||| Sbjct: 207 cgagaccct 215
>emb|X17233.1|LGRBCS4A Lemna gibba rbcS gene SSU40A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 131 bits (66), Expect = 3e-27 Identities = 153/182 (84%) Strand = Plus / Plus Query: 336 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 426 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcggctgcaccgac 485 Query: 396 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 455 |||| |||||| || |||||||||||||| |||||||| ||||| || | ||| Sbjct: 486 gccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtacttcgtc 545 Query: 456 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 515 | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| |||| Sbjct: 546 agaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctacaag 605 Query: 516 cc 517 || Sbjct: 606 cc 607 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 159 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 205 ||||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 169 tgcatgcaggtgtggccgccggagggcctgaagaagttcgagaccct 215
>emb|X17231.1|LGRBCS5B Lemna gibba rbcS gene SSU5B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 800 Score = 131 bits (66), Expect = 3e-27 Identities = 153/182 (84%) Strand = Plus / Plus Query: 336 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 447 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcggctgcaccgac 506 Query: 396 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 455 |||| |||||| || |||||||||||||| |||||||| ||||| || | ||| Sbjct: 507 gccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtatttcgtc 566 Query: 456 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 515 | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| |||| Sbjct: 567 agaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctacaag 626 Query: 516 cc 517 || Sbjct: 627 cc 628 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 137 cagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagtt 196 ||||||||| || ||| | || ||||||||||||||||| |||||| |||||||||| Sbjct: 147 cagcaacggcggcagggttagctgcatgcaggtgtggccgccggagggcctcaagaagtt 206 Query: 197 cgagaccct 205 ||||||||| Sbjct: 207 cgagaccct 215
>emb|X17230.1|LGRBCS5A Lemna gibba rbcS gene SSU5A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 858 Score = 131 bits (66), Expect = 3e-27 Identities = 153/182 (84%) Strand = Plus / Plus Query: 336 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 423 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcggctgcaccgac 482 Query: 396 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 455 |||| |||||| || |||||||||||||| |||||||| ||||| || | ||| Sbjct: 483 gccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtatttcgtc 542 Query: 456 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 515 | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| |||| Sbjct: 543 agaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctacaag 602 Query: 516 cc 517 || Sbjct: 603 cc 604 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 137 cagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagtt 196 ||||||||| || ||| | || ||||||||||||||||| |||||| |||||||||| Sbjct: 147 cagcaacggcggcagggttagctgcatgcaggtgtggccgccggagggcctcaagaagtt 206 Query: 197 cgagaccct 205 ||||||||| Sbjct: 207 cgagaccct 215
>gb|AY693395.1| Lolium perenne ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 195 Score = 129 bits (65), Expect = 1e-26 Identities = 145/169 (85%), Gaps = 2/169 (1%) Strand = Plus / Plus Query: 231 gaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgag 290 ||||||||||| |||||| |||||| ||||||||||||| ||||| || ||| | ||| Sbjct: 28 gaggccctcctgaagcagatcgactttttgatccgctccaaatgggttccctgcttggag 87 Query: 291 ttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtactacgatgg 349 |||||||||||||| ||||||||||||||| | | ||| |||| || |||||||| || Sbjct: 88 ttcagcaaggttggcttcatcttccgtgagttcggcagca-ctcccggatactacgacgg 146 Query: 350 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 | ||||||||||||||||||||||||| |||||||| ||||| |||||| Sbjct: 147 caggtactggacaatgtggaagctgcccatgttcggctgcactgacgcc 195
>emb|AJ428877.1|ROB428877 Rumex obtusifolius mRNA for putative ribulose 1,5 biphosphate carboxylase small subunit percursor (rbcs gene) Length = 686 Score = 123 bits (62), Expect = 8e-25 Identities = 140/166 (84%) Strand = Plus / Plus Query: 352 ggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctca 411 |||||||||| |||||||||||||| |||||||| ||||| |||||||| ||||| || Sbjct: 416 ggtactggaccatgtggaagctgcccatgttcgggtgcactgacgccacccaggttgtcg 475 Query: 412 acgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcg 471 |||| | ||||||| ||||||| ||||| | || | |||||||| |||||||||| Sbjct: 476 ccgagctcgaggaggctaagaaggcttacccacatgctttcgtccgcattatcggattcg 535 Query: 472 acaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 517 ||||| | ||||| ||||||||||||||||||||||||| |||||| Sbjct: 536 acaacgtccgtcaagtgcagtgcgtcagcttcatcgcctacaagcc 581
>emb|X17232.1|LGRBCS26 Lemna gibba rbcS gene SSU26 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 936 Score = 115 bits (58), Expect = 2e-22 Identities = 151/182 (82%) Strand = Plus / Plus Query: 336 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| || |||||||||| ||||||||| |||| |||||||| ||||||||| Sbjct: 404 gggtactacgacgggaggtactggacgatgtggaagttgcccatgttcggctgcaccgac 463 Query: 396 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 455 |||| |||||| || |||||||||||||| |||||||| ||||| || | ||| Sbjct: 464 gccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtacttcgtc 523 Query: 456 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 515 | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| |||| Sbjct: 524 agaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctacaag 583 Query: 516 cc 517 || Sbjct: 584 cc 585 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 159 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 205 ||||||||||||||||| |||||| |||||||||| |||||||| Sbjct: 169 tgcatgcaggtgtggccgccggagggcctcaagaagtttgagaccct 215
>dbj|AB067656.1| Oryza sativa (japonica cultivar-group) OsrbcS gene for small subunit of ribulose-1,5-bisphosphate carboxylase, promoter region and partial cds Length = 1815 Score = 115 bits (58), Expect = 2e-22 Identities = 128/150 (85%), Gaps = 1/150 (0%) Strand = Plus / Plus Query: 20 atggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttccaggggctcaa 79 ||||||||| ||||| ||||| |||||||||||| |||||||||| |||||||||||||| Sbjct: 1551 atggccccctccgtg-atggcgtcgtcggccaccaccgtcgctcccttccaggggctcaa 1609 Query: 80 gtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcggcagcgtcag 139 ||||||||||||| | |||||| ||||||||| | | ||| |||||| |||||| Sbjct: 1610 gtccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcag 1669 Query: 140 caacggtggaaggatcaggtgcatgcaggt 169 ||| || || |||||||||||||||||||| Sbjct: 1670 caatggcggcaggatcaggtgcatgcaggt 1699
>gb|L24497.1|PYPRBCS Pyrus malus X domestica ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, complete cds Length = 813 Score = 101 bits (51), Expect = 3e-18 Identities = 171/211 (81%) Strand = Plus / Plus Query: 314 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 373 ||||||| ||||| ||| || || ||||| ||||| |||||||||||||||||||||| Sbjct: 349 ccgtgagaacaacagatccccaggatactatgatggaaggtactggacaatgtggaagct 408 Query: 374 gcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaa 433 ||| |||||||||||||||||| | | |||||| | || ||| |||| |||| |||||| Sbjct: 409 gcccatgttcggatgcaccgactcttcccaggtgttgaaagagctggaagaggccaagaa 468 Query: 434 ggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtg 493 || ||||| | | | |||| ||||||||||||||||| | ||||| |||||||| Sbjct: 469 ggcctacccccaatccttcatccgtatcatcggattcgacaatgtccgtcaagtgcagtg 528 Query: 494 cgtcagcttcatcgccttcaagccaccaggc 524 | |||| |||||||| | |||||| |||||| Sbjct: 529 catcagtttcatcgcttacaagcctccaggc 559 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 aagaagttcgagaccctgtcttac 212 ||||||||||||||||| |||||| Sbjct: 221 aagaagttcgagaccctctcttac 244
>gb|L10212.1|CIP1RSS Mesembryanthemum crystallinum (clone: rbcs-1) rubisco small subunit gene, complete cds Length = 3552 Score = 101 bits (51), Expect = 3e-18 Identities = 147/179 (82%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||||||||| || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 2349 tactacgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 2408 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | |||||| || ||| | ||||||| |||||||| |||||||| || | |||| Sbjct: 2409 tcccaggtggtcgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 2468 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 517 |||||||||||||||||| ||||||| || ||||| |||| |||||||||| |||||| Sbjct: 2469 atcatcggattcgacaacgtgcgtcaagtacagtgtatcagtttcatcgcctacaagcc 2527
>gb|M86717.1|SCFBCS1A Saccharum hybrid cultivar H32-8560 ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit gene, complete cds Length = 2328 Score = 99.6 bits (50), Expect = 1e-17 Identities = 134/160 (83%), Gaps = 4/160 (2%) Strand = Plus / Plus Query: 10 tagtacagctatggcccccaccgtgnatggcctcgtcggccacctccgtcgctcctttcc 69 |||| |||| ||||| | ||||||| ||||||||||| |||||| ||| ||||| |||| Sbjct: 1162 tagtccagccatggcgctcaccgtg-atggcctcgtccgccaccgccgctgctccgttcc 1220 Query: 70 aggggctcaagtccaccgccggcctccccgtcagccgccgctcgaacggtgctagcctcg 129 |||||||||||||||||||| ||||||||||| ||| ||||| | | | ||||||| Sbjct: 1221 aggggctcaagtccaccgccagcctccccgtcgcccgacgctccacc---accagcctcg 1277 Query: 130 gcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 169 || ||||||||||| ||||||||| ||||||||||||| Sbjct: 1278 ccaaagtcagcaacggcggaaggatccggtgcatgcaggt 1317 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgc 397 |||||||| |||||||||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 1582 tactacgacggccggtactggaccatgtggaagctgcccatgttcggctgcaccgacgc 1640 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 243 aagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaagg 300 |||||||| ||||||||| | ||| ||| |||||||| ||||||||||||||||||| Sbjct: 1486 aagcaggtggactacctgctgcgcaacaactgggtgccctgcctcgagttcagcaagg 1543
>dbj|AB236868.1| Panax ginseng mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 790 Score = 97.6 bits (49), Expect = 4e-17 Identities = 151/185 (81%) Strand = Plus / Plus Query: 336 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 |||||||| || || || ||||||||||||||||||||||| ||||| |||||||| || Sbjct: 392 gggtactatgacggacgttactggacaatgtggaagctgcccatgtttggatgcactgat 451 Query: 396 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 455 | | |||||| | || || || |||||| ||||||||||||||| | || || || Sbjct: 452 tcatctcaggtgttgaaagaagtagaggagtgcaagaaggagtacccaaatgcatacatc 511 Query: 456 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 515 || || || |||||||||||| | ||||| ||||||||| |||| ||||| ||||||||| Sbjct: 512 cgaattattggattcgacaacgtccgtcaagtgcagtgcatcagtttcattgccttcaag 571 Query: 516 ccacc 520 ||||| Sbjct: 572 ccacc 576 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 189 aagaagttcgagaccctgtcttacttgccaccactca 225 |||||||||||||| ||||||||| | |||| ||||| Sbjct: 242 aagaagttcgagactctgtcttacctcccacaactca 278
>gb|AF039015.1|AF039015 Fritillaria agrestis clone TA1 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 97.6 bits (49), Expect = 4e-17 Identities = 55/57 (96%) Strand = Plus / Plus Query: 329 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 385 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 483 atctcctgggtactacgatgggcggtactggacaatgtggaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccct 205 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039013.1|AF039013 Fritillaria agrestis clone TA26 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 97.6 bits (49), Expect = 4e-17 Identities = 55/57 (96%) Strand = Plus / Plus Query: 329 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 385 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 483 atctcctgggtactacgatgggcggtactggacaatgtggaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccct 205 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039009.1|AF039009 Fritillaria agrestis clone TA23 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 97.6 bits (49), Expect = 4e-17 Identities = 55/57 (96%) Strand = Plus / Plus Query: 329 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 385 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 483 atctcctgggtactacgatggacggtactggacaatgtggaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccct 205 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF024574.1|AF024574 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type III (rbcS3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 97.6 bits (49), Expect = 4e-17 Identities = 55/57 (96%) Strand = Plus / Plus Query: 329 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 385 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 363 atctcctgggtactacgatgggcggtactggacaatgtggaagctgcccatgttcgg 419 Score = 40.1 bits (20), Expect = 8.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 158 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 205 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 192 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 239
>gb|BC038257.1| Mus musculus cDNA clone MGC:47002 IMAGE:5148367, complete cds Length = 763 Score = 95.6 bits (48), Expect = 2e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 314 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 373 ||||||||||||| ||| || || ||||| ||||| || |||||||| ||||||||| | Sbjct: 379 ccgtgagcacaacaaatcgccaggatactatgatggtcgctactggactatgtggaagtt 438 Query: 374 gcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaa 433 |||||||||||| ||||| ||| | | |||||| | || ||||| |||||||||||||| Sbjct: 439 gcctatgttcgggtgcactgacccagctcaggtggtgaatgaggttgaggaggtcaagaa 498 Query: 434 ggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtg 493 || |||||||| || | ||| | ||||| || |||||||||| ||||| ||||| || Sbjct: 499 ggcttaccctgatgcttttgttaggatcattgggttcgacaacaaacgtcaagtgcaatg 558 Query: 494 cgtcagcttcatcgccttcaagcc 517 | | || ||||| |||| |||||| Sbjct: 559 cattagtttcattgcctacaagcc 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 189 aagaagttcgagaccctgtcttacttgccaccactca 225 ||||||||||||||||| |||||| | ||||| |||| Sbjct: 251 aagaagttcgagaccctctcttaccttccacctctca 287
>emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene Length = 1274 Score = 95.6 bits (48), Expect = 2e-16 Identities = 156/192 (81%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 |||||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 632 tactacgacggccgctactggaccatgtggaagctgcccatgttcggctgcaccgacgcc 691 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 || |||||| ||| ||| || |||||| || | |||||| ||||| | |||| Sbjct: 692 acgcaggtgtacaaggagctgcaggaggccatcgccgcgtacccggacgccttccaccgc 751 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||| ||||||||| | | ||| ||||||||||||||||||||||| |||||| Sbjct: 752 gtcatcggcttcgacaacgtcaggcagacgcagtgcgtcagcttcatcgcctacaagccc 811 Query: 519 ccaggctgcgag 530 || ||| ||||| Sbjct: 812 cccggcagcgag 823 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 36 atggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctc 95 |||||||||||||| ||| ||||||| || |||||||| ||||||||| ||||| ||||| Sbjct: 214 atggcctcgtcggcaaccgccgtcgccccgttccagggtctcaagtccgccgccagcctc 273 Query: 96 cccgtcagccgccgc 110 |||||| ||||||| Sbjct: 274 cccgtcgcccgccgc 288 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 123 agcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 169 |||||||||| |||||||||||| ||||||||| ||||||||||||| Sbjct: 298 agcctcggcaacgtcagcaacggcggaaggatccggtgcatgcaggt 344
>dbj|D00572.1|PYPRBCO Pyrus pyrifolia var. culta mRNA for RuBisCO small subunit, complete cds Length = 844 Score = 93.7 bits (47), Expect = 7e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 406 tactatgatggaaggtactggacaatgtggaagctgcccatgttcggatgcaccgactct 465 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | |||||| | || ||| |||| |||| |||||||| ||||| | | | |||| Sbjct: 466 tcccaggtgttgaaggagctggaagaggccaagaaggcttacccccagtccttcatccgt 525 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 517 ||||||||||||||||| | ||||| ||||||||| |||| |||||||| | |||||| Sbjct: 526 atcatcggattcgacaatgtccgtcaagtgcagtgcatcagtttcatcgcttacaagcc 584 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 aagaagttcgagaccctgtcttac 212 ||||||||||||||||| |||||| Sbjct: 253 aagaagttcgagaccctctcttac 276
>emb|X65494.1|MSCARB Malus (unidentified species of crab apple) mRNA for rubisco-1,5-bisphosphate carboxylase Length = 853 Score = 93.7 bits (47), Expect = 7e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 410 tactatgatggaaggtactggacaatgtggaagctgcccatgttcggatgcaccgactct 469 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | |||||| | || ||| |||| |||| |||||||| ||||| | | | |||| Sbjct: 470 tcccaggtgttgaaagagctggaagaggccaagaaggcctacccccaatccttcatccgt 529 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 517 ||||||||||||||||| | ||||| ||||||||| |||| |||||||| | |||||| Sbjct: 530 atcatcggattcgacaatgtccgtcaagtgcagtgcatcagtttcatcgcttacaagcc 588 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 aagaagttcgagaccctgtcttac 212 ||||||||||||||||| |||||| Sbjct: 257 aagaagttcgagaccctctcttac 280
>gb|M38316.1|CIPRBCS2 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-2) mRNA, complete cds Length = 680 Score = 93.7 bits (47), Expect = 7e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 380 tactatgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 439 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | |||||| | ||| | ||||||| |||||||| |||||||| || | |||| Sbjct: 440 tcccaggtggttgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 499 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 517 |||||||||||||||||| ||||||| || |||||| |||| |||||||||| |||||| Sbjct: 500 atcatcggattcgacaacgtgcgtcaagtacagtgcatcagtttcatcgcctacaagcc 558 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 aagaagttcgagaccctgtcttac 212 |||||||||||||| ||||||||| Sbjct: 227 aagaagttcgagactctgtcttac 250
>gb|AF034479.1| Zantedeschia aethiopica ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 968 Score = 91.7 bits (46), Expect = 3e-15 Identities = 148/182 (81%) Strand = Plus / Plus Query: 336 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| || || |||||||| ||||||||| |||| |||||||| ||||||||| Sbjct: 383 gggtactacgacgggcgctactggaccatgtggaagttgcccatgttcgggtgcaccgac 442 Query: 396 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 455 || | ||||||||||| |||||||| ||| || |||| |||||| ||| | | Sbjct: 443 tcctcccaggtgctcaaggaggtggacgagtgcagtaaggcgtaccccgactacttcaac 502 Query: 456 cgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 515 || |||||||| |||||||||| ||| || ||||||||| |||||||| || ||| |||| Sbjct: 503 cggatcatcggcttcgacaacacgcgccaagtgcagtgcatcagcttcctcacctacaag 562 Query: 516 cc 517 || Sbjct: 563 cc 564 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 157 ggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgc 216 ||||||||||||||||||| ||||||| |||||||||||||||||||| ||| ||| Sbjct: 204 ggtgcatgcaggtgtggccgccggagggcaagaagaagttcgagaccctgtcctacctgc 263 Query: 217 caccactca 225 ||||||||| Sbjct: 264 caccactca 272
>gb|AY843526.1| Ammopiptanthus mongolicus ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 824 Score = 89.7 bits (45), Expect = 1e-14 Identities = 156/193 (80%) Strand = Plus / Plus Query: 333 cctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcacc 392 ||||| ||||| ||||| || |||||||| |||||||||||||||||||| || |||| Sbjct: 372 cctggatactatgatggacgctactggaccatgtggaagctgcctatgtttgggtgcagt 431 Query: 393 gacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtat 452 || || |||||||| | || ||| | |||||| ||||||||| ||||| || | Sbjct: 432 gatgcttcacaggtgatgaaggagcttgaggagtgcaagaaggaataccccactgctttc 491 Query: 453 gtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttc 512 ||||| ||||| ||||||||||||| ||||| || |||||| |||| ||||| |||| | Sbjct: 492 gtccgaatcattggattcgacaacaaacgtcaagttcagtgcatcagtttcattgcctac 551 Query: 513 aagccaccaggct 525 ||||||||||||| Sbjct: 552 aagccaccaggct 564 Score = 40.1 bits (20), Expect = 8.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 189 aagaagttcgagaccctgtcttacttgccaccactc 224 |||||||||||||| || || ||| ||||||||||| Sbjct: 225 aagaagttcgagactctttcctacctgccaccactc 260
>gb|AF044400.1|AF044400 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P2A (rbcS-P2A) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 534 Score = 89.7 bits (45), Expect = 1e-14 Identities = 129/157 (82%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||||||||||||| ||||||||||||||||||||||| | | || ||| | || Sbjct: 220 tactggacaatgtggaagttgcctatgttcggatgcaccgactcggcccaagtgatgaag 279 Query: 414 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 473 ||| | | ||| |||||||||||||||| | || | |||| ||||||||||||||| Sbjct: 280 gagcttcaagagtgcaagaaggagtaccctcaggcatggatccgtatcatcggattcgac 339 Query: 474 aacatgcgtcaggtgcagtgcgtcagcttcatcgcct 510 ||| | ||||| ||||| |||||||| ||||| |||| Sbjct: 340 aacgttcgtcaagtgcaatgcgtcagtttcattgcct 376
>gb|AF044399.1|AF044399 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P1B (rbcS-P1B) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 629 Score = 89.7 bits (45), Expect = 1e-14 Identities = 129/157 (82%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||||||||||||| ||||||||||||||||||||||| | | || ||| | || Sbjct: 220 tactggacaatgtggaagttgcctatgttcggatgcaccgactcggcccaagtgatgaag 279 Query: 414 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 473 ||| | | ||| |||||||||||||||| | || | |||| ||||||||||||||| Sbjct: 280 gagcttcaagagtgcaagaaggagtaccctcaggcatggatccgtatcatcggattcgac 339 Query: 474 aacatgcgtcaggtgcagtgcgtcagcttcatcgcct 510 ||| | ||||| ||||| |||||||| ||||| |||| Sbjct: 340 aacgttcgtcaagtgcaatgcgtcagtttcattgcct 376
>gb|AF039012.1|AF039012 Fritillaria agrestis clone TA27 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 329 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 385 ||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| Sbjct: 483 atctcctgggtactacgatgggcggtactggacaatgttgaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccct 205 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039010.1|AF039010 Fritillaria agrestis clone TA24 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 329 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 385 ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 483 atctcctgggtactacgatgggcgctactggacaatgtggaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccct 205 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF031543.1|AF031543 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase small subunit type IV (rbcS4) mRNA, complete cds Length = 732 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 329 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 385 ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 358 atctcctgggtactacgatgggcgctactggacaatgtggaagctgccgatgttcgg 414 Score = 40.1 bits (20), Expect = 8.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 158 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 205 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 187 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 234
>gb|AF024572.1|AF024572 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type I (rbcS1) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 713 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 329 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 385 ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 357 atctcctgggtactacgatgggcgctactggacaatgtggaagctgccgatgttcgg 413 Score = 40.1 bits (20), Expect = 8.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 158 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 205 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 186 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 233
>ref|NM_202369.1| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT1G67090 transcript variant AT1G67090.2 mRNA, complete cds Length = 871 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 367 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 426 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 427 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 486 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 487 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 546 Query: 519 cca 521 ||| Sbjct: 547 cca 549
>ref|NM_105379.2| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT1G67090 transcript variant AT1G67090.1 mRNA, complete cds Length = 878 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 374 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 433 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 434 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 493 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 494 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 553 Query: 519 cca 521 ||| Sbjct: 554 cca 556
>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete sequence Length = 90387 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Minus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 78365 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 78306 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 78305 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 78246 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 78245 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 78186 Query: 519 cca 521 ||| Sbjct: 78185 cca 78183
>gb|AY142543.1| Arabidopsis thaliana clone RAFL04-14-I04 (R09825) mRNA sequence Length = 2116 Score = 85.7 bits (43), Expect = 2e-13 Identities = 145/179 (81%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| || Sbjct: 1751 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgactcc 1810 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | |||||| | || || || || || ||||||||||||||| | ||| | | | Sbjct: 1811 gctcaggtgttgaaggaagttgaagaatgcaagaaggagtacccgggcgccttcattagg 1870 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 517 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 1871 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 1929
>gb|BT000362.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090) mRNA, complete cds Length = 583 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 346 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 405 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 406 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 465 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 466 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 525 Query: 519 cca 521 ||| Sbjct: 526 cca 528
>gb|AY097366.1| Arabidopsis thaliana At1g67090/F1O19.10 mRNA, complete cds Length = 543 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 346 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 405 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 406 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 465 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 466 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 525 Query: 519 cca 521 ||| Sbjct: 526 cca 528
>gb|AY093380.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (F5A8.1) mRNA, complete cds Length = 583 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 346 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 405 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 406 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 465 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 466 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 525 Query: 519 cca 521 ||| Sbjct: 526 cca 528
>gb|AY065101.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (F5A8.1) mRNA, complete cds Length = 617 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 368 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 427 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 428 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 487 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 488 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 547 Query: 519 cca 521 ||| Sbjct: 548 cca 550
>gb|AY062711.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090; F5A8.1) mRNA, complete cds Length = 772 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 372 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 431 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 432 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 491 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 492 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 551 Query: 519 cca 521 ||| Sbjct: 552 cca 554
>gb|AY062612.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (F5A8.1) mRNA, complete cds Length = 750 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 372 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 431 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 432 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 491 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 492 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 551 Query: 519 cca 521 ||| Sbjct: 552 cca 554
>gb|AY059940.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090; F5A8.1) mRNA, complete cds Length = 721 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 375 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 434 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 435 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 494 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 495 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 554 Query: 519 cca 521 ||| Sbjct: 555 cca 557
>gb|AY058831.1| Arabidopsis thaliana At1g67090/F1O19.10 mRNA, complete cds Length = 788 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 372 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 431 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 432 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 491 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 492 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 551 Query: 519 cca 521 ||| Sbjct: 552 cca 554
>gb|AY054188.1| Arabidopsis thaliana At1g67090/F1O19.10 mRNA, complete cds Length = 711 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 374 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 433 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 434 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 493 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 494 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 553 Query: 519 cca 521 ||| Sbjct: 554 cca 556
>gb|AY054581.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090; F5A8.1) mRNA, complete cds Length = 702 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 375 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 434 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 435 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 494 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 495 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 554 Query: 519 cca 521 ||| Sbjct: 555 cca 557
>gb|AF410291.1|AF410291 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds Length = 752 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 373 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 432 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 433 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 492 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 493 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 552 Query: 519 cca 521 ||| Sbjct: 553 cca 555
>gb|AY050459.1| Arabidopsis thaliana AT4g36870/C7A10_490 mRNA, complete cds Length = 3162 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 374 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 433 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 434 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 493 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 494 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 553 Query: 519 cca 521 ||| Sbjct: 554 cca 556
>gb|AC004146.1|AC004146 Arabidopsis thaliana chromosome I BAC F5A8, complete sequence Length = 101933 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Minus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 2254 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 2195 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 2194 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 2135 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 2134 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 2075 Query: 519 cca 521 ||| Sbjct: 2074 cca 2072
>gb|AF325004.2|AF325004 Arabidopsis thaliana At1g67090 (At1g67090/F1O19.10) mRNA, complete cds Length = 754 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 373 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 432 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 433 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 492 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 493 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 552 Query: 519 cca 521 ||| Sbjct: 553 cca 555
>gb|AF372874.1|AF372874 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds Length = 632 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 197 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 256 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 257 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 316 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 317 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 376 Query: 519 cca 521 ||| Sbjct: 377 cca 379
>emb|BX814212.1|CNS0ADS1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZA04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 735 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 352 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 411 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 412 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 471 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 472 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 531 Query: 519 cca 521 ||| Sbjct: 532 cca 534
>emb|BX818334.1|CNS0ACND Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL73ZC07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 735 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 352 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 411 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 412 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 471 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 472 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 531 Query: 519 cca 521 ||| Sbjct: 532 cca 534
>emb|BX818366.1|CNS0ACKZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL75ZD08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 697 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 314 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 373 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 374 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 433 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 434 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 493 Query: 519 cca 521 ||| Sbjct: 494 cca 496
>emb|BX817617.1|CNS0ACFY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL32ZH02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 730 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 347 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 406 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 407 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 466 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 467 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 526 Query: 519 cca 521 ||| Sbjct: 527 cca 529
>gb|AF325011.1|AF325011 Arabidopsis thaliana 000C10C11 mRNA, complete cds Length = 825 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 373 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 432 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 433 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 492 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 493 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 552 Query: 519 cca 521 ||| Sbjct: 553 cca 555
>emb|X13711.1|NPRBCS8B Nicotiana plumbaginifolia rbcS-8B gene for ribulose bisphosphate carboxylase small subunit Length = 2293 Score = 85.7 bits (43), Expect = 2e-13 Identities = 136/167 (81%) Strand = Plus / Plus Query: 352 ggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctca 411 |||||||||| ||||||||||| ||||||||||||||||| || ||||| || ||| | Sbjct: 1814 ggtactggaccatgtggaagctacctatgttcggatgcactgatgccacccaagtgttgg 1873 Query: 412 acgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcg 471 |||||||| |||| ||||||| ||||| | || | ||||| || || ||||||| Sbjct: 1874 ctgaggtggaagaggcgaagaaggcatacccacaggcctgggtccgtattattggattcg 1933 Query: 472 acaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||| ||||||| ||||||||| |||| ||||| |||| ||||||| Sbjct: 1934 acaacgtgcgtcaagtgcagtgcatcagtttcattgcctacaagcca 1980
>emb|X03821.1|PERBCS11 Petunia x hybrida rbcS gene (ssu11A) for ribulose 1,5-bisphosphate carboxylase small subunit Length = 1314 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 314 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 373 ||||||| || | |||||||| ||||||| |||||| |||||||||| ||||||||||| Sbjct: 972 ccgtgagtaccatgcatctccaaggtactatgatggcaggtactggaccatgtggaagct 1031 Query: 374 gcctatgttcggatgcaccgacgccac 400 ||| |||||||| |||||||| ||||| Sbjct: 1032 gcccatgttcgggtgcaccgatgccac 1058 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||| |||||||||||| ||||||| ||||| ||| |||| ||||| |||| |||||| Sbjct: 1117 atcattggattcgacaacgtgcgtcaagtgcaatgcatcagtttcattgcctacaagccc 1176 Query: 519 ccaggct 525 ||||||| Sbjct: 1177 ccaggct 1183
>gb|BT002076.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090) mRNA, complete cds Length = 583 Score = 85.7 bits (43), Expect = 2e-13 Identities = 148/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 346 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 405 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 406 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 465 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 466 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 525 Query: 519 cca 521 ||| Sbjct: 526 cca 528
>emb|X14564.1|ATATSGS A.thaliana ats1B, ats2B and ats3B gene for ribulose-1,5-biphosphate carboxylase small subunit (rbcS) (EC 4.1.1.39) Length = 9647 Score = 85.7 bits (43), Expect = 2e-13 Identities = 145/179 (81%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| || Sbjct: 9047 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgactcc 9106 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || ||||| || || ||||||||||||||| | ||| | | | Sbjct: 9107 gctcaagtgttgaaggaggttgaagaatgcaagaaggagtacccgggcgccttcattagg 9166 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 517 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 9167 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 9225 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 2200 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 2256 Score = 69.9 bits (35), Expect = 1e-08 Identities = 143/179 (79%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| || |||||||||||||||||||| || ||||||||||||||||| || Sbjct: 5348 tactatgatggacgatactggacaatgtggaagcttccattgttcggatgcaccgactcc 5407 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || || || || ||||||||||||||||| ||| | | | Sbjct: 5408 gctcaagtgttgaaggaagttgaagaatgcaagaaggagtaccctggcgccttcattagg 5467 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 517 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 5468 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 5526 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 517 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| |||||| Sbjct: 2320 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcc 2378
>gb|M36685.1|TOBRBCS8B N.plumbaginifolia ribulose bisphosphate carboxylase (rbcS-8B) gene, complete cds Length = 2293 Score = 85.7 bits (43), Expect = 2e-13 Identities = 136/167 (81%) Strand = Plus / Plus Query: 352 ggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctca 411 |||||||||| ||||||||||| ||||||||||||||||| || ||||| || ||| | Sbjct: 1814 ggtactggaccatgtggaagctacctatgttcggatgcactgatgccacccaagtgttgg 1873 Query: 412 acgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcg 471 |||||||| |||| ||||||| ||||| | || | ||||| || || ||||||| Sbjct: 1874 ctgaggtggaagaggcgaagaaggcatacccacaggcctgggtccgtattattggattcg 1933 Query: 472 acaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||| ||||||| ||||||||| |||| ||||| |||| ||||||| Sbjct: 1934 acaacgtgcgtcaagtgcagtgcatcagtttcattgcctacaagcca 1980
>gb|M38318.1|CIPRBCS4 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-4) mRNA, complete cds Length = 747 Score = 85.7 bits (43), Expect = 2e-13 Identities = 145/179 (81%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||||||||| || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 373 tactacgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 432 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | ||||| | ||| | ||||||| |||||||| |||||||| || | |||| Sbjct: 433 tcccaggttgttgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 492 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 517 ||||| |||||||||||| ||||||| || ||||| ||||| |||||||||| |||||| Sbjct: 493 atcataggattcgacaacgtgcgtcaagtccagtgtgtcagtttcatcgcctacaagcc 551
>gb|L10215.1|CIP345RSS Mesembryanthemum crystallinum (clones: rbcs-3 and -4) rubisco small subunit genes, complete cds, (clone: rbcs-5) rubisco small submnit gene, partial cds Length = 8682 Score = 85.7 bits (43), Expect = 2e-13 Identities = 145/179 (81%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||||||||| || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 7511 tactacgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 7570 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | ||||| | ||| | ||||||| |||||||| |||||||| || | |||| Sbjct: 7571 tcccaggttgttgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 7630 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 517 ||||| |||||||||||| ||||||| || ||||| ||||| |||||||||| |||||| Sbjct: 7631 atcataggattcgacaacgtgcgtcaagtccagtgtgtcagtttcatcgcctacaagcc 7689 Score = 85.7 bits (43), Expect = 2e-13 Identities = 145/179 (81%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||||||||| || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 3529 tactacgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 3588 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | ||||| | ||| | ||||||| |||||||| |||||||| || | |||| Sbjct: 3589 tcccaggttgttgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 3648 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 517 ||||| |||||||||||| ||||||| || ||||| ||||| |||||||||| |||||| Sbjct: 3649 atcataggattcgacaacgtgcgtcaagtccagtgtgtcagtttcatcgcctacaagcc 3707 Score = 71.9 bits (36), Expect = 3e-09 Identities = 132/164 (80%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||||||||||||| |||| |||||||| ||||| ||| | | ||||| | Sbjct: 1178 tactggacaatgtggaagttgcccatgttcggttgcactgacccatcccaggttgttgct 1237 Query: 414 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 473 ||| | ||||||| |||||||| |||||||| || | |||| ||||||||||||||| Sbjct: 1238 gagctcgaggaggccaagaaggcttaccctgaggccttcatccgtatcatcggattcgac 1297 Query: 474 aacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 517 ||| ||||||| || ||||| |||| |||||||||| |||||| Sbjct: 1298 aacgtgcgtcaagtccagtgtatcagtttcatcgcctacaagcc 1341 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 aagaagttcgagaccctgtcttac 212 |||||||||||||| ||||||||| Sbjct: 895 aagaagttcgagactctgtcttac 918
>gb|L10214.1|CIP2RSS Mesembryanthemum crystallinum (clone: rbcs-2) rubisco small subunit gene, complete cds Length = 2671 Score = 85.7 bits (43), Expect = 2e-13 Identities = 145/179 (81%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 1862 tactatgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 1921 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | |||||| | ||| | ||||||| |||||||| |||||||| || | ||| Sbjct: 1922 tcccaggtggttgctgagctcgaggaggccaagaaggcttaccctgaggccttcacccgt 1981 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 517 |||||||||||||||||| ||||||| || |||||| |||| |||||||||| |||||| Sbjct: 1982 atcatcggattcgacaacgtgcgtcaagtacagtgcatcagtttcatcgcctacaagcc 2040 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 aagaagttcgagaccctgtcttac 212 |||||||||||||| ||||||||| Sbjct: 1499 aagaagttcgagactctgtcttac 1522
>gb|AF039007.1|AF039007 Fritillaria agrestis clone TA10 rbcS pseudogene, partial sequence Length = 584 Score = 83.8 bits (42), Expect = 7e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 329 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 382 ||||||||||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 472 atctcctgggtactacgatgggcgctactggacaatgtggaagctgcccatgtt 525 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccct 205 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 233 aggtctggcccatcgtggggttgaagaagttcgagaccct 272
>gb|AF039006.1|AF039006 Fritillaria agrestis clone TA17 rbcS pseudogene, partial sequence Length = 584 Score = 83.8 bits (42), Expect = 7e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 329 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 382 ||||||||||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 472 atctcctgggtactacgatgggcgctactggacaatgtggaagctgcccatgtt 525 Score = 40.1 bits (20), Expect = 8.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccct 205 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 233 aggtctggcccatcgtggggttgaagaagttcgagaccct 272
>gb|AF039005.1|AF039005 Fritillaria agrestis clone TA13 rbcS pseudogene, partial sequence Length = 584 Score = 83.8 bits (42), Expect = 7e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 329 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 382 ||||||||||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 472 atctcctgggtactacgatgggcgctactggacaatgtggaagctgcccatgtt 525
>gb|M29642.1|PETRBCB Petunia ribulose 1,5-bisphosphate carboxylase small subunit mRNA (clone pSSU 51), partial cds Length = 212 Score = 83.8 bits (42), Expect = 7e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 327 gcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgga 386 |||||||| |||||||| |||||| |||||||||| |||||||||||||| |||||||| Sbjct: 4 gcatctccagggtactatgatggcaggtactggaccatgtggaagctgcccatgttcggg 63 Query: 387 tgcaccgacgccac 400 ||||| || ||||| Sbjct: 64 tgcactgatgccac 77
>ref|NM_123204.3| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38430 mRNA, complete cds Length = 808 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 375 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 431
>ref|NM_123202.2| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38410 transcript variant AT5G38410.1 mRNA, complete cds Length = 925 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 397 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 453
>ref|NM_001036904.1| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38410 transcript variant AT5G38410.2 mRNA, complete cds Length = 963 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 435 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 491
>gb|AY267351.1| Flaveria bidentis ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (RbcS2) mRNA, complete cds Length = 787 Score = 81.8 bits (41), Expect = 3e-12 Identities = 128/157 (81%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||||||||||||| ||||||||||||||||||||||| | | || ||| | || Sbjct: 399 tactggacaatgtggaagttgcctatgttcggatgcaccgactcagcccaagtgatgaag 458 Query: 414 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 473 ||| | | ||| |||||||||||||||| | || | |||| ||||||||||| ||| Sbjct: 459 gagcttcaagagtgcaagaaggagtaccctcaggcatggatccgtatcatcggatttgac 518 Query: 474 aacatgcgtcaggtgcagtgcgtcagcttcatcgcct 510 ||| | ||||| ||||| |||||||| ||||| |||| Sbjct: 519 aacgtccgtcaagtgcaatgcgtcagtttcattgcct 555
>gb|AY143814.1| Arabidopsis thaliana At5g38430/F1O19.10 mRNA, complete cds Length = 546 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 346 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 402
>gb|BT000721.1| Arabidopsis thaliana clone RAFL04-15-J15 (R09791) putative ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (At5g38410) mRNA, complete cds Length = 772 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 398 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 454
>gb|AY051025.1| Arabidopsis thaliana putative RuBisCO small 3b subunit precursor (At5g38410) mRNA, complete cds Length = 577 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 346 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 402
>gb|AF360124.1| Arabidopsis thaliana putative ribulose bisphosphate carboxylase small chain 3b precursor (At5g38410) mRNA, complete cds Length = 720 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 397 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 453
>emb|X02353.1|NTRUBSS Tobacco gene for ribulose 1,5-bisphosphate carboxylase small subunit Length = 2362 Score = 81.8 bits (41), Expect = 3e-12 Identities = 134/165 (81%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||| ||||||||||| ||||||||||||||||| || ||||| || ||| | Sbjct: 1808 tactggaccatgtggaagctacctatgttcggatgcactgatgccacccaagtgttggct 1867 Query: 414 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 473 |||||||| |||| ||||||| ||||| | || | |||| ||||| ||||||||| Sbjct: 1868 gaggtggaagaggcgaagaaggcatacccacaggcctggatccgtatcattggattcgac 1927 Query: 474 aacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||| ||||||| ||||||||| |||| ||||| |||| ||||||| Sbjct: 1928 aacgtgcgtcaagtgcagtgcatcagtttcattgcctacaagcca 1972
>emb|AJ843975.1| Plantago major mRNA for Rubisco SSU (rbcs1a gene) Length = 761 Score = 81.8 bits (41), Expect = 3e-12 Identities = 155/193 (80%) Strand = Plus / Plus Query: 333 cctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcacc 392 ||||| ||||| || || || |||||||||||||||||||| || ||||||||||||||| Sbjct: 373 cctggatactatgacggacgctactggacaatgtggaagctacccatgttcggatgcacc 432 Query: 393 gacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtat 452 || |||| || || | ||| |||||||| ||||||||| ||||| |||| | Sbjct: 433 gatgccagccaagtcattgctgagctggaggagtgcaagaaggaataccccaacgcctgg 492 Query: 453 gtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttc 512 ||| | |||||||| ||||||||| | || || || |||||| |||| ||||| |||| | Sbjct: 493 gtcaggatcatcggcttcgacaacgttcgccaagtccagtgcatcagtttcattgcctcc 552 Query: 513 aagccaccaggct 525 ||||||||||||| Sbjct: 553 aagccaccaggct 565 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Plus Query: 250 tcgactacctgatccgctccaagtgggtgccttgcctcgagttc 293 |||||||||| |||||||||||||| | |||||||| |||||| Sbjct: 287 tcgactaccttctccgctccaagtggattccttgccttgagttc 330
>gb|AY098970.1| Arabidopsis thaliana At5g38410/F1O19.10 mRNA, complete cds Length = 546 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 346 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 402
>gb|AF462822.1|AF462822 Arabidopsis thaliana At5g38410/F1O19.10 mRNA, complete cds Length = 764 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 397 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 453
>gb|AY065026.1| Arabidopsis thaliana AT5g53140/MFH8_8 mRNA, complete cds Length = 2204 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 21 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 77
>gb|AY064686.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (At5g38410; MXI10.13) mRNA, complete cds Length = 595 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 346 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 402
>gb|AY054552.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (At5g38410; MXI10.13) mRNA, complete cds Length = 772 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 389 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 445
>gb|AF410314.1|AF410314 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds Length = 728 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 397 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 453
>gb|AF410283.1|AF410283 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds Length = 652 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 372 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 428
>gb|AF044401.1|AF044401 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P2B (rbcS-P2B) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 532 Score = 81.8 bits (41), Expect = 3e-12 Identities = 128/157 (81%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||| ||||||||| ||||||||||||||||||||||| | | || ||| | || Sbjct: 220 tactggacgatgtggaagttgcctatgttcggatgcaccgactcggcccaagtgatgaag 279 Query: 414 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 473 ||| | | ||| |||||||||||||||| | || | |||| ||||||||||||||| Sbjct: 280 gagcttcaagagtgcaagaaggagtaccctcaggcatggatccgtatcatcggattcgac 339 Query: 474 aacatgcgtcaggtgcagtgcgtcagcttcatcgcct 510 ||| | ||||| ||||| |||||||| ||||| |||| Sbjct: 340 aacgttcgtcaagtgcaatgcgtcagtttcattgcct 376
>emb|BX833384.1|CNS0A1LA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL51ZA07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 703 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 373 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 429
>emb|BX830381.1|CNS0A1HW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 717 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 355 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 411
>emb|BX830099.1|CNS0A1FH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB59ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 372 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 79 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 135
>emb|BX832776.1|CNS0A0L8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL10ZE03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 715 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 385 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 441
>emb|BX831203.1|CNS0A0SX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS68ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 706 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 374 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 430
>emb|BX833789.1|CNS0A0DD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL77ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 700 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 368 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 424
>emb|BX833660.1|CNS0A0FN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL69ZD11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 716 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 384 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 440
>emb|BX832874.1|CNS0A0CD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL19ZB09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 709 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 379 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 435
>gb|BT005730.1| Arabidopsis thaliana clone RAFL15-16-B15 (R20676) Length = 1794 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 392 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 448
>dbj|AB005248.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXI10 Length = 83646 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 57682 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 57626 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 50833 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 50777 Score = 69.9 bits (35), Expect = 1e-08 Identities = 143/179 (79%) Strand = Plus / Minus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| || |||||||||||||||||||| || ||||||||||||||||| || Sbjct: 54535 tactatgatggacgatactggacaatgtggaagcttccattgttcggatgcaccgactcc 54476 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || || || || ||||||||||||||||| ||| | | | Sbjct: 54475 gctcaagtgttgaaggaagttgaagaatgcaagaaggagtaccctggcgccttcattagg 54416 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 517 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 54415 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 54357
>gb|AF039014.1|AF039014 Fritillaria agrestis clone TA8 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 592 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 329 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 385 ||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 480 atctcctggttactacgatgggcgatactggacaatgtggaagctgcccatgttcgg 536 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccct 205 ||||||||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtgtggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039011.1|AF039011 Fritillaria agrestis clone TA22 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 591 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 329 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 385 ||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 479 atctcctggttactacgatgggcgatactggacaatgtggaagctgcccatgttcgg 535 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccct 205 ||||||||||||||| ||| | ||||||||||||||||| Sbjct: 243 aggtgtggcccatcgtggggttgaagaagttcgagaccct 282
>gb|AF039008.1|AF039008 Fritillaria agrestis clone TA15 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 592 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 329 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 385 ||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 480 atctcctggttactacgatgggcgatactggacaatgtggaagctgcccatgttcgg 536 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccct 205 ||||||||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtgtggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039004.1|AF039004 Fritillaria agrestis clone TA9 rbcS pseudogene, partial sequence Length = 594 Score = 81.8 bits (41), Expect = 3e-12 Identities = 54/57 (94%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 329 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 385 ||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| Sbjct: 483 atctcctgggtactacgatgggcggtactggacaatgt-gaagctgcccatgttcgg 538 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 214 |||| |||||||||| ||| | ||||||||||||||||| || ||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccctctcctactt 292
>gb|AF031544.1|AF031544 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase small subunit type V (rbcS5) mRNA, complete cds Length = 728 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 329 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 385 ||||||||||||||||||||| || |||||||| |||||||||||||| |||||||| Sbjct: 385 atctcctgggtactacgatgggcgctactggacgatgtggaagctgcccatgttcgg 441 Score = 40.1 bits (20), Expect = 8.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 158 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 205 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 214 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 261
>gb|AF303941.1|AF303941 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS3 mRNA, complete cds Length = 772 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 454 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 513 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 495 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 554 Query: 514 agccaccaggct 525 |||| ||||||| Sbjct: 555 agcccccaggct 566 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 314 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 373 ||||||||||||| || || || ||||||||||| || |||||||| ||||||||||| Sbjct: 355 ccgtgagcacaacaggtcaccaggatactacgatggacgctactggaccatgtggaagct 414 Query: 374 gcctatgttcggatgcac 391 ||||||||| || ||||| Sbjct: 415 gcctatgtttggttgcac 432
>gb|AF303940.1|AF303940 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS2 mRNA, complete cds Length = 830 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 454 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 513 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 495 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 554 Query: 514 agccaccaggct 525 |||| ||||||| Sbjct: 555 agcccccaggct 566 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 314 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 373 ||||||||||||| || || || ||||||||||| || |||||||| ||||||||||| Sbjct: 355 ccgtgagcacaacaggtcaccaggatactacgatggacgctactggaccatgtggaagct 414 Query: 374 gcctatgttcggatgcac 391 ||||||||| || ||||| Sbjct: 415 gcctatgtttggttgcac 432
>gb|AF303939.1|AF303939 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS1 mRNA, complete cds Length = 750 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 454 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 513 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 495 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 554 Query: 514 agccaccaggct 525 |||| ||||||| Sbjct: 555 agcccccaggct 566 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 314 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 373 ||||||||||||| || || || ||||||||||| || |||||||| ||||||||||| Sbjct: 355 ccgtgagcacaacaggtcaccaggatactacgatggacgctactggaccatgtggaagct 414 Query: 374 gcctatgttcggatgcac 391 ||||||||| || ||||| Sbjct: 415 gcctatgtttggttgcac 432
>gb|U39567.1|GMU39567 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 765 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 454 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 513 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 492 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 551 Query: 514 agccaccaggct 525 |||| ||||||| Sbjct: 552 agcccccaggct 563 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 314 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 373 ||||||||||||| || || || ||||||||||| || |||||||| ||||||||||| Sbjct: 352 ccgtgagcacaacaggtcaccaggatactacgatggacgctactggaccatgtggaagct 411 Query: 374 gcctatgttcggatgcac 391 ||||||||| || ||||| Sbjct: 412 gcctatgtttggttgcac 429
>gb|AF024573.1|AF024573 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type II (rbcS2) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 784 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Plus Query: 330 tctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 385 |||||||||||||||||||| || |||||||| |||||||||||||| |||||||| Sbjct: 362 tctcctgggtactacgatgggcgctactggacgatgtggaagctgcccatgttcgg 417 Score = 40.1 bits (20), Expect = 8.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 158 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 205 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 190 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 237
>emb|AJ786660.1| Limonium gibertii partial mRNA for ribulose 1,5 bisphosphate carboxylase/oxygenase small subunit (rbcS1 gene) Length = 459 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 463 tcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacca 521 ||||||||||||||| |||||| ||||||||| |||| |||||||||| |||||||||| Sbjct: 401 tcggattcgacaacaagcgtcaagtgcagtgcatcagtttcatcgcctacaagccacca 459 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcac 391 |||||||||||||||||||| || |||| ||||||||| Sbjct: 292 tactggacaatgtggaagcttcccatgtacggatgcac 329
>emb|X13611.1|ATRBCSA Arabidopsis thaliana ats1A gene for ribulose 1.5-biphoshate carboxylase small subunit (EC 4.1.1.39) Length = 2821 Score = 77.8 bits (39), Expect = 4e-11 Identities = 147/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 2319 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 2378 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 2379 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 2438 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| ||| | |||| ||||||| Sbjct: 2439 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcgttgcctacaagcca 2498 Query: 519 cca 521 ||| Sbjct: 2499 cca 2501
>gb|AY093388.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090) mRNA, complete cds Length = 583 Score = 77.8 bits (39), Expect = 4e-11 Identities = 147/183 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 346 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 405 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 406 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattaga 465 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 || |||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 466 ataatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 525 Query: 519 cca 521 ||| Sbjct: 526 cca 528
>gb|AF312228.1|AF312228 Citrus reticulata ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit precursor, gene, partial cds, nuclear gene for chloroplast product Length = 353 Score = 77.8 bits (39), Expect = 4e-11 Identities = 135/167 (80%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||||||||| || ||||||||||||||||||||||| |||| || ||||| || || Sbjct: 184 tactacgatggacgctactggacaatgtggaagctgcccatgtatgggtgcacagatgca 243 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 || ||||| | || ||||| | ||||||| ||||||| ||||| | | | ||||| Sbjct: 244 acccaggttttgaaggaggttggggaggtccagaaggaatacccacattcattcgtccga 303 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcat 505 || |||||||| ||||||| |||||| ||||||||| |||| ||||| Sbjct: 304 attatcggatttgacaacaagcgtcaagtgcagtgcatcagtttcat 350
>emb|X55937.1|BNRBCSF1 Brassica napus rbcSF1 gene for ribulose-1,5-biphosphate carboxylase/oxygenase small subunit Length = 2006 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| |||||||| |||||| |||| |||||||||| ||||||| Sbjct: 1454 atcatcggattcgacaacaaccgtcaggtccagtgcatcagtttcatcgcctacaagcca 1513 Query: 519 cca 521 ||| Sbjct: 1514 cca 1516 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 391 |||||||||||||| |||||||||||||||||||| || ||||||||||||| Sbjct: 1334 tactacgatggccgttactggacaatgtggaagcttcccttgttcggatgcac 1386
>gb|AY273795.1| Citrus limon ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, partial cds; nuclear gene for chloroplast product Length = 357 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||||||||| || ||||||||||||||||||||||| ||||| || ||||| || || Sbjct: 199 tactacgatggacgctactggacaatgtggaagctgcccatgtttgggtgcacagatgca 258 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaagga 436 |||||||| | || ||||| | ||||||| ||||||| Sbjct: 259 acacaggttttgaaggaggttggggaggtccagaagga 296
>gb|DQ336280.1| Vitis pseudoreticulata ribulose-1,5-bisphophate carboxylase/oxygenase small subunit mRNA, complete cds Length = 543 Score = 75.8 bits (38), Expect = 2e-10 Identities = 128/158 (81%) Strand = Plus / Plus Query: 318 gagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcct 377 ||||||||| |||||| || |||||||| || |||||||||| |||||||||||||| Sbjct: 337 gagcacaacagatctccaggatactacgacggaaggtactggaccatgtggaagctgccc 396 Query: 378 atgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggag 437 |||||||| ||||| ||| | | |||||| | || |||||| | || | || || |||| Sbjct: 397 atgttcgggtgcactgactcagcccaggtgattaaggaggtgcaagaagccaggacggag 456 Query: 438 taccctgacgcgtatgtccgcatcatcggattcgacaa 475 |||||| |||| | |||| ||||||||||||||||| Sbjct: 457 taccctaacgcccacatccgaatcatcggattcgacaa 494
>gb|AF044398.1|AF044398 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P1A (rbcS-P1A) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 608 Score = 75.8 bits (38), Expect = 2e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgac 395 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 220 tactggacaatgtggaagttgcctatgttcggatgcaccgac 261 Score = 60.0 bits (30), Expect = 1e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 428 caagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggt 487 |||||||||||||||| | || | |||| |||||||||||||||||| | ||||| || Sbjct: 294 caagaaggagtaccctcaggcatggatccgtatcatcggattcgacaacgttcgtcaagt 353 Query: 488 gcagtgcgtcagcttcat 505 ||| |||||||| ||||| Sbjct: 354 gcaatgcgtcagtttcat 371
>gb|AF044396.1|AF044396 Flaveria ramosissima ribulose-1,5-bisphosphate carboxylase small subunit R2 (rbcS-R2) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 574 Score = 75.8 bits (38), Expect = 2e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgac 395 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 220 tactggacaatgtggaagttgcctatgttcggatgcaccgac 261 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 428 caagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggt 487 |||||||||||||||| | || | |||| ||||||||||| |||||| | ||||| || Sbjct: 294 caagaaggagtaccctcaggcatggatccgtatcatcggatttgacaacgtccgtcaagt 353 Query: 488 gcagtgcgtcagcttcatcgcct 510 ||| ||| |||| ||||| |||| Sbjct: 354 gcaatgcatcagtttcattgcct 376
>emb|BX833317.1|CNS0A0CV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZC08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 733 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcacc 392 ||||||||||| ||||||||||||||||||||||| || |||||||||||||| Sbjct: 384 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcacc 437 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 517 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 504 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 562
>gb|U29939.1|FPU29939 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS7) mRNA, complete cds Length = 743 Score = 75.8 bits (38), Expect = 2e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgac 395 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 379 tactggacaatgtggaagttgcctatgttcggatgcaccgac 420
>gb|U29938.1|FPU29938 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS6) mRNA, complete cds Length = 724 Score = 75.8 bits (38), Expect = 2e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgac 395 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 364 tactggacaatgtggaagttgcctatgttcggatgcaccgac 405 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 428 caagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggt 487 |||||||||||||||| | || | |||| |||||||||||||||||| | ||||| || Sbjct: 438 caagaaggagtaccctcaggcatggatccgtatcatcggattcgacaacgtccgtcaagt 497 Query: 488 gcagtgcgtcagcttcat 505 ||| ||| |||| ||||| Sbjct: 498 gcaatgcatcagtttcat 515
>gb|U29937.1|FPU29937 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS5) mRNA, complete cds Length = 731 Score = 75.8 bits (38), Expect = 2e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgac 395 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 367 tactggacaatgtggaagttgcctatgttcggatgcaccgac 408
>gb|U29936.1|FPU29936 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS4) mRNA, complete cds Length = 753 Score = 75.8 bits (38), Expect = 2e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgac 395 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 396 tactggacaatgtggaagttgcctatgttcggatgcaccgac 437
>gb|U29935.1|FPU29935 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS3) mRNA, complete cds Length = 746 Score = 75.8 bits (38), Expect = 2e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgac 395 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 381 tactggacaatgtggaagttgcctatgttcggatgcaccgac 422
>gb|U29934.1|FPU29934 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS2) mRNA, complete cds Length = 763 Score = 75.8 bits (38), Expect = 2e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgac 395 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 393 tactggacaatgtggaagttgcctatgttcggatgcaccgac 434 Score = 54.0 bits (27), Expect = 6e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 428 caagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggt 487 |||||||||||||||| | || | |||| ||||||||||| |||||| | ||||| || Sbjct: 467 caagaaggagtaccctcaggcatggatccgtatcatcggatttgacaacgttcgtcaagt 526 Query: 488 gcagtgcgtcagcttcatcgccttcaagcca 518 |||||| |||| |||||||| | ||||||| Sbjct: 527 tcagtgcatcagtttcatcgcttccaagcca 557
>emb|X01722.1|NSRUB1 Nicotiana silvestris mRNA for the small subunit of ribulose bisphosphate carboxylase Length = 796 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 454 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 513 |||| ||||| |||||||||||| ||||||| ||||||||| |||| |||||||||| || Sbjct: 527 tccgtatcattggattcgacaacgtgcgtcaagtgcagtgcatcagtttcatcgcctaca 586 Query: 514 agcca 518 ||||| Sbjct: 587 agcca 591 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| |||||| | |||||||| ||||||||||| ||||||||||||||||| || ||| Sbjct: 412 tactatgatggcagatactggaccatgtggaagctacctatgttcggatgcactgatgcc 471 Query: 399 ac 400 || Sbjct: 472 ac 473
>emb|BX832995.1|CNS0A22F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL28ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 550 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||| ||| || ||||||||||||||||| Sbjct: 203 tactacgatggacggtactggacaatgtggaggcttccattgttcggatgcaccgac 259
>emb|BX830542.1|CNS0A26B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB8ZB01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 538 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| ||||||||||||||||||||||| || | ||||||||||||||| Sbjct: 172 tactacgatggacggtactggacaatgtggaagcttccatttttcggatgcaccgac 228
>dbj|AB004883.1| Marchantia paleacea var. diptera mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 931 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 |||||||||||||| |||||||| ||||||||| |||| |||||||| ||||||||| Sbjct: 407 tactacgatggccgatactggaccatgtggaagttgcccatgttcgggtgcaccgac 463
>emb|AJ419827.1|CAR419827 Coffea arabica rbcs1 gene for rubisco small subunit Length = 2034 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 1774 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 1833 Query: 414 gaggt 418 ||||| Sbjct: 1834 gaggt 1838 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 1879 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 1938
>emb|X07367.1|BNRBCSSU B.napus mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit Length = 726 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 391 |||||||||||||| |||||||||||||||||||| || ||||||||||||| Sbjct: 377 tactacgatggccgttactggacaatgtggaagcttcccttgttcggatgcac 429 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 ||||||||||||||||||| ||||| || |||||| |||| |||||||||| ||||||| Sbjct: 497 atcatcggattcgacaacaaccgtcaagtccagtgcatcagtttcatcgcctacaagcca 556 Query: 519 cca 521 ||| Sbjct: 557 cca 559
>emb|X05037.1|FTRBCR Flaveria trinervia mRNA for ribulose 1,5-biphosphate carboxylase Length = 752 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||| ||||||||| ||||||||||||||||||||||| | | || ||| | || Sbjct: 371 tactggacgatgtggaagttgcctatgttcggatgcaccgactcagcccaagtgatgaag 430 Query: 414 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 473 ||| | | ||| |||||||||||||||| | || | |||| ||||||||||| ||| Sbjct: 431 gagcttcaagagtgcaagaaggagtaccctcaggcatggatccgtatcatcggatttgac 490 Query: 474 aacatgcgtcaggtgcagtgcgtcagcttcatcgcct 510 ||| | ||||| ||||| |||||||| ||||| |||| Sbjct: 491 aacgtccgtcaagtgcaatgcgtcagtttcattgcct 527
>gb|DQ300277.1| Coffea arabica cultivar Rume Sudan plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 414 gaggt 418 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300276.1| Coffea arabica cultivar Colombia plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 414 gaggt 418 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300275.1| Coffea arabica cultivar SL-28 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 414 gaggt 418 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300274.1| Coffea arabica cultivar Kent plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 414 gaggt 418 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300273.1| Coffea arabica cultivar F-502 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 414 gaggt 418 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300272.1| Coffea arabica cultivar Tipica plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 414 gaggt 418 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300271.1| Coffea arabica cultivar Bourbon plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 414 gaggt 418 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300270.1| Coffea arabica cultivar Mundo novo plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 414 gaggt 418 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300269.1| Coffea arabica cultivar Ethiopia 167 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 414 gaggt 418 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300268.1| Coffea arabica cultivar Ethiopia 87 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 414 gaggt 418 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300267.1| Coffea arabica cultivar Alghe plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 414 gaggt 418 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300266.1| Coffea arabica cultivar Dilla plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 413 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 414 gaggt 418 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 518 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|J01308.1|TOBRBPC Nicotiana sylvestris ribulose-1,5-bisphosphate carboxylase small subunit mRNA Length = 453 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 454 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 513 |||| ||||| |||||||||||| ||||||| ||||||||| |||| |||||||||| || Sbjct: 185 tccgtatcattggattcgacaacgtgcgtcaagtgcagtgcatcagtttcatcgcctaca 244 Query: 514 agcca 518 ||||| Sbjct: 245 agcca 249 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| |||||| | |||||||| ||||||||||| ||||||||||||||||| || ||| Sbjct: 70 tactatgatggcagatactggaccatgtggaagctacctatgttcggatgcactgatgcc 129 Query: 399 ac 400 || Sbjct: 130 ac 131
>dbj|AB026685.1| Physcomitrella patens mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 818 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 462 tactacgatgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 518
>gb|AY705444.1| Fagus sylvatica chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, complete cds; nuclear gene for chloroplast product Length = 562 Score = 71.9 bits (36), Expect = 3e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 336 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 |||||||| ||||| || |||||| |||||||||||||| ||||| ||||||||||| Sbjct: 356 gggtactatgatggacgttactgggtgatgtggaagctgcccatgtttggatgcaccgat 415 Query: 396 gccacacaggtg 407 |||||||||||| Sbjct: 416 gccacacaggtg 427 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 454 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcat 505 |||| ||||||||||||||||||| |||||| ||||||||| |||| ||||| Sbjct: 474 tccgaatcatcggattcgacaacaagcgtcaagtgcagtgcatcagtttcat 525
>gb|AY023648.1| Oryza sativa microsatellite MRG5973 containing (TTC)X13, closest to marker S10704, genomic sequence Length = 239 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 166 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 225 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 173 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 232 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 127 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 169 |||||| ||||||||| || || |||||||||||||||||||| Sbjct: 31 tcggcaacgtcagcaatggcggcaggatcaggtgcatgcaggt 73
>gb|AF101233.1|AF101233 Manihot esculenta clone U291 ribulose 1,5-bisphosphate carboxylase small chain precursor, mRNA, complete cds; chloroplast gene for chloroplast product Length = 780 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 336 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 391 |||||||||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 355 gggtactacgatggacgttactggacaatgtggaagctgccaatgtttgggtgcac 410
>gb|AF101232.1|AF101232 Manihot esculenta clone U216 ribulose 1,5-bisphosphate carboxylase small chain precursor, mRNA, complete cds; chloroplast gene for chloroplast product Length = 793 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 336 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 391 |||||||||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 396 gggtactacgatggacgttactggacaatgtggaagctgccaatgtttgggtgcac 451
>gb|AF101230.1|AF101230 Manihot esculenta clone R312 ribulose 1,5-bisphosphate carboxylase small chain precursor, mRNA, complete cds; chloroplast gene for chloroplast product Length = 811 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 336 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 391 |||||||||||||| || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 355 gggtactacgatggacgttactggacaatgtggaagctgccaatgtttgggtgcac 410
>gb|U39857.1|GTU39857 Glycine tomentella ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit precursor (rbcS) gene, nuclear gene encoding chloroplast protein, complete cds Length = 1069 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 454 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 513 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 992 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 1051 Query: 514 agcc 517 |||| Sbjct: 1052 agcc 1055 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 333 cctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 391 ||||| ||||| ||||| || |||||||| ||||||||||||||| |||| || ||||| Sbjct: 871 cctggatactatgatggacgctactggaccatgtggaagctgcctgtgtttggctgcac 929
>gb|U39856.1|GSU39856 Glycine soja ribulose 1,5-bisphosphate carboxylase small subunit precursor (rbcS) gene, nuclear gene encoding chloroplast protein, complete cds Length = 1089 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 454 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 513 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 1012 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 1071 Query: 514 agcc 517 |||| Sbjct: 1072 agcc 1075 Score = 60.0 bits (30), Expect = 1e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 314 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 373 ||||||||||||| || || || ||||||||||| || | |||||| ||||||||||| Sbjct: 872 ccgtgagcacaacaggtcaccaggatactacgatggacgctgctggaccatgtggaagct 931 Query: 374 gcctatgttcggatgcac 391 ||||||||| || ||||| Sbjct: 932 gcctatgtttggttgcac 949
>emb|X17546.1|EGRBCS Euglena gracilis rbcS mRNA for the small subunits of ribulose 1,5-bisphosphate carboxylase/oxygenase (EC 4.1.1.39) Length = 4300 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 350 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 409 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 3679 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 3738 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 350 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 409 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 2818 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 2877 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 350 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 409 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 2383 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 2442 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 350 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 409 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 1954 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 2013 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 350 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 409 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 661 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 720 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 350 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcca 399 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| Sbjct: 1093 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgcca 1142 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 409 |||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 3251 tactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 3306 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 354 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 409 |||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 1526 tactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 1581
>emb|X79152.1|EGRBCS1 E.gracilis rbcS 1 gene exons 1 to 19 Length = 4446 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 350 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 409 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 3768 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 3827 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 350 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 409 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 3336 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 3395 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 350 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 409 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 2472 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 2531 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 350 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 409 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 2040 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 2099 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 350 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 409 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 1608 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 1667 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 350 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 409 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| |||||||| Sbjct: 744 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgccagccaggtgct 803 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 350 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcca 399 |||||||||||| |||||||||||||| |||||||| ||||| ||||||| Sbjct: 1176 ccggtactggaccatgtggaagctgcccatgttcggctgcacggacgcca 1225 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 350 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgct 409 |||||||||||| |||||||||||||| ||||| || ||||| ||||||| |||||||| Sbjct: 2904 ccggtactggaccatgtggaagctgcccatgtttggctgcacggacgccagccaggtgct 2963
>gb|M16889.1|SOYRUBPA Soybean ribulose 1,5-bisphosphate carboxylase small subunit (SRS4) gene, complete cds Length = 2185 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 454 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 513 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 1663 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 1722 Query: 514 agcc 517 |||| Sbjct: 1723 agcc 1726 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 391 ||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 1548 tactacgatggacgctactggaccatgtggaagctgcctatgtttggttgcac 1600
>gb|L10213.1|CIP6RSS Mesembryanthemum crystallinum (clone: rbcs-6) rubisco small subunit gene, complete cds Length = 3024 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 454 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 513 |||| |||||||||||||||||| ||||||| ||||| || ||||| |||||||||| || Sbjct: 2584 tccgtatcatcggattcgacaacgtgcgtcaagtgcaatgtgtcagtttcatcgcctaca 2643 Query: 514 agcc 517 |||| Sbjct: 2644 agcc 2647 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 391 ||||||||||| || |||||||||||||||||| |||| |||||||| ||||| Sbjct: 2469 tactacgatggacgttactggacaatgtggaagttgcccatgttcggttgcac 2521
>dbj|AB006080.1| Fagus crenata mRNA for small subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase, complete cds Length = 789 Score = 71.9 bits (36), Expect = 3e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 336 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 395 |||||||| ||||| || |||||| |||||||||||||| ||||| ||||||||||| Sbjct: 392 gggtactatgatggacgttactgggtgatgtggaagctgcccatgtttggatgcaccgat 451 Query: 396 gccacacaggtg 407 |||||||||||| Sbjct: 452 gccacacaggtg 463 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 454 tccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcat 505 |||| ||||||||||||||||||| |||||| ||||||||| |||| ||||| Sbjct: 510 tccgaatcatcggattcgacaacaagcgtcaagtgcagtgcatcagtttcat 561
>ref|NM_123203.2| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38420 mRNA, complete cds Length = 837 Score = 69.9 bits (35), Expect = 1e-08 Identities = 143/179 (79%) Strand = Plus / Plus Query: 339 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 398 ||||| ||||| || |||||||||||||||||||| || ||||||||||||||||| || Sbjct: 397 tactatgatggacgatactggacaatgtggaagcttccattgttcggatgcaccgactcc 456 Query: 399 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgc 458 | || ||| | || || || || || ||||||||||||||||| ||| | | | Sbjct: 457 gctcaagtgttgaaggaagttgaagaatgcaagaaggagtaccctggcgccttcattagg 516 Query: 459 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 517 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 517 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 575 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,050,030 Number of Sequences: 3902068 Number of extensions: 5050030 Number of successful extensions: 103463 Number of sequences better than 10.0: 430 Number of HSP's better than 10.0 without gapping: 432 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101817 Number of HSP's gapped (non-prelim): 1528 length of query: 647 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 624 effective length of database: 17,143,297,704 effective search space: 10697417767296 effective search space used: 10697417767296 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
