>gb|AY549888.2| Triticum aestivum putative proteinase inhibitor-related protein
           (wrsi5-1) mRNA, complete cds
          Length = 608

 Score =  504 bits (254), Expect = e-139
 Identities = 319/344 (92%)
 Strand = Plus / Plus

                                                                       
Query: 27  catgaagagcaccaagctcgcggcgatcctgatcctccaggccgtcctggtcatggggat 86
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86  catgaagagcaccaagctcgcggcgatcctgatcctccaggccgtcctggtcatggggat 145

                                                                       
Query: 87  cctctcccacgttaacgccgacttcttccccaagtgctgcaacaactgcaggtccttctc 146
           |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 cctctcacacgtgaacgccgacttcttccccaagtgctgcaacaactgcaggtccttctc 205

                                                                       
Query: 147 gggggtnnangtctgcgacgacgcccacccccagtgccccaagggctgntcnnnctgccg 206
            |||||  | |||||||||||||||||||||||||||||||||||||| ||   ||||||
Sbjct: 206 cggggtcgacgtctgcgacgacgcccacccccagtgccccaagggctgctcggcctgccg 265

                                                                       
Query: 207 cgtggtgaccccgagccctcacaagacgttccgctgcgccgacatgaanagcaccgtcga 266
           ||||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 266 cgtggtgacgcccagccctcacaagacgttccggtgcgccgacatgaagagcaccgtcga 325

                                                                       
Query: 267 cggcacctgcggtggcccatgcaaaaagcactgatcgcttcanggcttcaggctcggacg 326
            ||||||||||| || ||||||||||||||||||||  |||| |||||||| ||| ||||
Sbjct: 326 tggcacctgcggcgggccatgcaaaaagcactgatccgttcagggcttcagtctcagacg 385

                                                       
Query: 327 aggtgtgccgcctagaataaagctcagatgagatgagcagncat 370
           ||| |||||||||| ||||||||||||||||||||||||| |||
Sbjct: 386 aggggtgccgcctaaaataaagctcagatgagatgagcagtcat 429

>emb|Z48729.1|HVBSI1 H.vulgare Bsi1 gene for putative protease inhibitor
          Length = 498

 Score =  281 bits (142), Expect = 8e-73
 Identities = 244/280 (87%), Gaps = 3/280 (1%)
 Strand = Plus / Plus

                                                                       
Query: 26  ccatgaagagcaccaagctcgcggcgatcctgatcctccaggccgtcctggtcatgggga 85
           |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||  
Sbjct: 10  ccatgaagggcaccaagctcgcggcgattctgatcctccaggccgtcctggtcatgggag 69

                                                                       
Query: 86  tcctctcccacgttaacgccgacttcttccccaagtgctgcaacaactgcaggtccttct 145
           ||||||| ||||| ||||||| ||  ||||||| ||||||||||||||||||||||||||
Sbjct: 70  tcctctcgcacgtgaacgccgtctatttccccacgtgctgcaacaactgcaggtccttct 129

                                                                       
Query: 146 cgggggtnnangtctgcgacgacgcccacccccagtgccccaagggctgntcnnnctgcc 205
           | |||||  | ||||||||||||||||| || ||||||||||  ||||| ||    ||||
Sbjct: 130 ccggggtcgacgtctgcgacgacgcccatccgcagtgccccaccggctgctcggcgtgcc 189

                                                                       
Query: 206 gcgtggtgaccccgagccctcacaagacgttccgctgcgccgacatgaanagcaccgtcg 265
           ||||||||||| ||| |||   | |||||||||||||||||||||||||   ||||||||
Sbjct: 190 gcgtggtgaccacgaaccc---ccagacgttccgctgcgccgacatgaaagccaccgtcg 246

                                                   
Query: 266 acggcacctgcggtggcccatgcaaaaagcactgatcgct 305
           ||||||||||||| || |||||||| ||| ||||||||||
Sbjct: 247 acggcacctgcggcgggccatgcaagaagtactgatcgct 286

>gb|L11882.1|WHTWALI5A Triticum aestivum protein of unknown function (wali5) mRNA,
           complete cds
          Length = 520

 Score =  264 bits (133), Expect = 2e-67
 Identities = 244/283 (86%), Gaps = 3/283 (1%)
 Strand = Plus / Plus

                                                                       
Query: 26  ccatgaagagcaccaagctcgcggcgatcctgatcctccaggccgtcctggtcatgggga 85
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 71  ccatgaagggcaccaagctcgcggcgatcctgatcctccaggccgtcctggtcatgggac 130

                                                                       
Query: 86  tcctctcccacgttaacgccgacttcttccccaagtgctgcaacaactgcaggtccttct 145
           ||||||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 131 tcctctcacacgtgaacgccgattttttccccaagtgctgcaacaactgcaggtccttct 190

                                                                       
Query: 146 cgggggtnnangtctgcgacgacgcccacccccagtgccccaagggctgntcnnnctgcc 205
           |||||||  | ||||||||||||||||||||| |||| ||| ||||||| ||    ||||
Sbjct: 191 cgggggtcgacgtctgcgacgacgcccaccccaagtgtccccagggctgctcggcgtgcc 250

                                                                       
Query: 206 gcgtggtgaccccgagccctcacaagacgttccgctgcgccgacatgaanagcaccgtcg 265
           |||||||| |  |||||||   | | | ||  |||||||| || |||||   ||||||||
Sbjct: 251 gcgtggtgtcgacgagccc---cgaaatgtggcgctgcgcggatatgaaatccaccgtcg 307

                                                      
Query: 266 acggcacctgcggtggcccatgcaaaaagcactgatcgcttca 308
           |||||||||||||||| || ||||| ||| |||||||| ||||
Sbjct: 308 acggcacctgcggtggaccctgcaagaagtactgatcggttca 350

>gb|L28009.1|WHTWALIA Triticum aestivum (wali6) mRNA, complete cds
          Length = 585

 Score =  107 bits (54), Expect = 3e-20
 Identities = 131/157 (83%), Gaps = 3/157 (1%)
 Strand = Plus / Plus

                                                                       
Query: 28  atgaagagcaccaagctcgcggcgatcctgatcctccaggccgtcctggtcatggggatc 87
           |||||||| | || ||||| |||||||||||| ||||||||||||||||||||||| |||
Sbjct: 76  atgaagagtagcacgctcgtggcgatcctgattctccaggccgtcctggtcatgggaatc 135

                                                                       
Query: 88  ctctcccacgttaacgccgacttcttccccaagtgctgcaacaactgcaggtccttctcg 147
           ||||| || |  ||||||||    ||||| || |||||| |||||||||||| |||||||
Sbjct: 136 ctctcacaggcgaacgccga---gttcccgaaatgctgcgacaactgcaggttcttctcg 192

                                                
Query: 148 ggggtnnangtctgcgacgacgcccacccccagtgcc 184
           ||||     |||||||||||||||  |||| ||||||
Sbjct: 193 ggggccgtggtctgcgacgacgccggccccaagtgcc 229

>gb|L11881.1|WHTWALI3A Triticum aestivum protein of unknown function (wali3) mRNA,
           complete cds
          Length = 564

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 88/100 (88%), Gaps = 3/100 (3%)
 Strand = Plus / Plus

                                                                       
Query: 52  atcctgatcctccaggccgtcctggtcatggggatcctctcccacgttaacgccgacttc 111
           ||||||||||| |||||||||||||||||||| |||||||| || |  ||||||||    
Sbjct: 79  atcctgatccttcaggccgtcctggtcatgggaatcctctcacaggcgaacgccga---g 135

                                                   
Query: 112 ttccccaagtgctgcaacaactgcaggtccttctcggggg 151
           ||||||||||||||| |||||||||||| |||||||||||
Sbjct: 136 ttccccaagtgctgcgacaactgcaggttcttctcggggg 175

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                           
Query: 25      gccatgaagagcaccaagctcgcggcgatcctgatcctccaggccgtcctggtcatgggg 84
               ||||||||||||| || ||||  || ||||||| | ||||||||||||||||||||||||
Sbjct: 1757733 gccatgaagagcagcacgctcatggtgatcctggttctccaggccgtcctggtcatgggg 1757674

                 
Query: 85      at 86
               ||
Sbjct: 1757673 at 1757672

>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0504H10
          Length = 143515

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                          
Query: 25     gccatgaagagcaccaagctcgcggcgatcctgatcctccaggccgtcctggtcatgggg 84
              ||||||||||||| || ||||  || ||||||| | ||||||||||||||||||||||||
Sbjct: 100076 gccatgaagagcagcacgctcatggtgatcctggttctccaggccgtcctggtcatgggg 100017

                
Query: 85     at 86
              ||
Sbjct: 100016 at 100015

>ref|NM_184249.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 306

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                     
Query: 28 atgaagagcaccaagctcgcggcgatcctgatcctccaggccgtcctggtcatggggat 86
          |||||||||| || ||||  || ||||||| | ||||||||||||||||||||||||||
Sbjct: 1  atgaagagcagcacgctcatggtgatcctggttctccaggccgtcctggtcatggggat 59

>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete
             sequence; splicing factor SF2-like protein (SF2) and
             universal stress protein (USP1) genes and Hv
             receptor-kinase-like pseudogene, complete cds; and
             retrotransposons Sandra6 and Sandra7, complete sequence
          Length = 82293

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 59    tcctccaggccgtcctggtcatggggatcctctccc 94
             ||||||||||| ||||||||||||| ||||||||||
Sbjct: 71810 tcctccaggccatcctggtcatgggaatcctctccc 71845

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 71       tcctggtcatggggatcctctcc 93
                |||||||||||||||||||||||
Sbjct: 25930562 tcctggtcatggggatcctctcc 25930540

>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0017B12
          Length = 157424

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 71    tcctggtcatggggatcctctcc 93
             |||||||||||||||||||||||
Sbjct: 85660 tcctggtcatggggatcctctcc 85638

>dbj|AK070101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044I16, full
           insert sequence
          Length = 2261

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 71  tcctggtcatggggatcctctcc 93
           |||||||||||||||||||||||
Sbjct: 818 tcctggtcatggggatcctctcc 840

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 46      gcggcgatcctgatcctccaggccg 70
               |||||||||||||||||||| ||||
Sbjct: 1946744 gcggcgatcctgatcctccacgccg 1946720

>gb|AC090116.15| Homo sapiens 12q BAC RP11-578B16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 162004

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 347   agctcagatgagatgagcagncat 370
             |||||||||||||||||||| |||
Sbjct: 86131 agctcagatgagatgagcagccat 86154

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 117     caagtgctgcaacaactgca 136
               ||||||||||||||||||||
Sbjct: 2027891 caagtgctgcaacaactgca 2027872

>ref|NM_001040330.1| Danio rerio zgc:136662 (zgc:136662), mRNA
          Length = 2659

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  gcaccgtcgacggcacctgc 276
            ||||||||||||||||||||
Sbjct: 1408 gcaccgtcgacggcacctgc 1389

>ref|XM_753018.1| Ustilago maydis 521 hypothetical protein (UM01964.1) partial mRNA
          Length = 1812

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  ggcagccatgaagagcacca 40
           ||||||||||||||||||||
Sbjct: 267 ggcagccatgaagagcacca 248

>ref|NM_001012370.1| Danio rerio exostoses (multiple) 1c (ext1c), mRNA
          Length = 2214

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  gcaccgtcgacggcacctgc 276
            ||||||||||||||||||||
Sbjct: 1156 gcaccgtcgacggcacctgc 1137

>gb|BC115216.1| Danio rerio exostoses (multiple) 1c, mRNA (cDNA clone MGC:136662
            IMAGE:8000407), complete cds
          Length = 2659

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  gcaccgtcgacggcacctgc 276
            ||||||||||||||||||||
Sbjct: 1408 gcaccgtcgacggcacctgc 1389

>ref|XM_680169.1| PREDICTED: Danio rerio similar to EXT1c (LOC572763), partial mRNA
          Length = 240

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 gcaccgtcgacggcacctgc 276
           ||||||||||||||||||||
Sbjct: 136 gcaccgtcgacggcacctgc 117

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 274     tgcggtggcccatgcaaaaa 293
               ||||||||||||||||||||
Sbjct: 1357655 tgcggtggcccatgcaaaaa 1357636

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 234    gttccgctgcgccgacatga 253
              ||||||||||||||||||||
Sbjct: 807673 gttccgctgcgccgacatga 807692

>dbj|BS000238.1| Pan troglodytes chromosome 22 clone:PTB-016O01, map 22, complete
              sequences
          Length = 168017

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    acgcccacccccagtgcccc 186
              ||||||||||||||||||||
Sbjct: 156620 acgcccacccccagtgcccc 156639

>gb|AF042096.3|AF042096 Bradyrhizobium japonicum UbiE (ubiE) gene, partial cds; AarF (aarF),
            panthotenate metabolism flavoprotein (dfp),
            deoxyuridine-triphosphatase (dut), putative sensor
            protein (bdfA), GalF-like (galF), hypothetical protein
            genes, complete cds; putative helicase 2 gene, partial
            cds; and unknown genes
          Length = 13289

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 234  gttccgctgcgccgacatga 253
            ||||||||||||||||||||
Sbjct: 8366 gttccgctgcgccgacatga 8347

>emb|AL954242.1|PTB109N16 Pan troglodytes chromosome 22 BAC PTB-109N16, complete sequence
          Length = 190477

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   acgcccacccccagtgcccc 186
             ||||||||||||||||||||
Sbjct: 61446 acgcccacccccagtgcccc 61465

>gb|AY734457.1| Danio rerio EXT1c mRNA, complete cds
          Length = 2214

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  gcaccgtcgacggcacctgc 276
            ||||||||||||||||||||
Sbjct: 1156 gcaccgtcgacggcacctgc 1137

>emb|AM118080.1| Ustilago hordei mating type region MAT-1, strain 364
          Length = 526707

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 23     cagccatgaagagcaccaagctcg 46
              ||||||||||||| ||||||||||
Sbjct: 158311 cagccatgaagaggaccaagctcg 158334


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,136,135
Number of Sequences: 3902068
Number of extensions: 2136135
Number of successful extensions: 36939
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36734
Number of HSP's gapped (non-prelim): 201
length of query: 399
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 377
effective length of database: 17,147,199,772
effective search space: 6464494314044
effective search space used: 6464494314044
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)