ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd25c16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BC029142.1| Homo sapiens, clone IMAGE:5196881, mRNA 729 0.0
2gb|AF498268.1| Haynaldia villosa clone kong28 mRNA 682 0.0
3ref|XM_507550.1| PREDICTED Oryza sativa (japonica cultivar-group... 202 7e-49
4ref|XM_507549.1| PREDICTED Oryza sativa (japonica cultivar-group... 202 7e-49
5ref|XM_507051.2| PREDICTED Oryza sativa (japonica cultivar-group... 202 7e-49
6ref|XM_468415.1| Oryza sativa (japonica cultivar-group), mRNA 202 7e-49
7gb|AY346465.1| Oryza sativa (indica cultivar-group) putative bro... 202 7e-49
8dbj|AK104947.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 7e-49
9dbj|AK104525.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 7e-49
10dbj|AK104684.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 7e-49
11dbj|AK104103.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 7e-49
12dbj|AK071580.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 7e-49
13dbj|AK065134.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 7e-49
14gb|AY346466.1| Oryza sativa (indica cultivar-group) brown planth... 188 1e-44
15gb|AY112171.1| Zea mays CL11049_1 mRNA sequence 141 2e-30
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
17dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
18dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
19dbj|AK068163.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
20gb|AC037492.5|AC037492 Homo sapiens chromosome 8, clone RP11-38H... 44 0.41
21gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 6.3
22ref|XM_841417.1| Trypanosoma brucei TREU927 hypothetical protein... 40 6.3
23gb|AC018738.4| Homo sapiens BAC clone RP11-419H23 from 2, comple... 40 6.3
24emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.3
25gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.3
26gb|AF131950.1| Human papillomavirus candHPV85, complete genome 40 6.3
27gb|AC008750.9| Homo sapiens chromosome 19 clone CTD-2616J11, com... 40 6.3
28gb|AE004451.1| Pseudomonas aeruginosa PAO1, section 12 of 529 of... 40 6.3
29dbj|AP002347.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.3
30dbj|AP000790.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.3

>gb|BC029142.1| Homo sapiens, clone IMAGE:5196881, mRNA
          Length = 1061

 Score =  729 bits (368), Expect = 0.0
 Identities = 441/460 (95%), Gaps = 4/460 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   cggttgtcgacagcgcccgccgatgtgtcggggtcgtcgtcaagtagcgatcgcgcgagg 62
           ||||||||||||| |||||||||||||||||||||||||||||| ||||||| || ||||
Sbjct: 429 cggttgtcgacagtgcccgccgatgtgtcggggtcgtcgtcaag-agcgatcacgtgagg 487

                                                                       
Query: 63  gcttcacatgggtcaaggacgaagattgcagatgtgatgacatctccagcaatcacgcta 122
           |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gcttcacatgggccaaagacgaagattgcagatgtgatgacatctccagcaatcacgcta 547

                                                                       
Query: 123 tcatgcgataaaacagtgaccgatgccgcagctctgatgctcaagaagaagatccacaga 182
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 548 tcatgcgataaaacagtgaccgatgccgcagctctgatgctcaggaagaagatccacaga 607

                                                                       
Query: 183 ttaccgatagtaaaccaggacaatcaagtaataggtatagttacccgcgatgacgttctt 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ttaccgatagtaaaccaggacaatcaagtaataggtatagttacccgcgatgacgttctt 667

                                                                       
Query: 243 cgcgcgttggaggccatgctgaagttttagaggcgcaggagcccatgcccggtacttgtg 302
           ||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||
Sbjct: 668 cgcgcgttggaggccatgctgaagttttagagatgcaggagtccatgcccggtacttgtg 727

                                                                       
Query: 303 gatctgtaaatatgtgtgtccgcggtacttttgagtagcaggcagatcctatag-atgta 361
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||
Sbjct: 728 gatctgtaaatatgtgtgtccgcggtac-tttgagtagcaggcagatcctatagtctgta 786

                                                                       
Query: 362 aaagtgtttgtagcctgtatcgc-aaaaatatgcctgggagcatttaggagagcttttcc 420
           |||||||||| || ||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 787 aaagtgtttgcagtctgtatcgcaaaaaataagcctgggagcatttaggagagcttttcc 846

                                                   
Query: 421 ttgtaaagaagcacgccaggaagattctgttctgtactgt 460
           ||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 847 ttgtaaagaagcacgccaggaagcttctgctctgtactgt 886



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>gb|AF498268.1| Haynaldia villosa clone kong28 mRNA
          Length = 1474

 Score =  682 bits (344), Expect = 0.0
 Identities = 426/448 (95%), Gaps = 4/448 (0%)
 Strand = Plus / Minus

                                                                       
Query: 3   cggttgtcgacagcgcccgccgatgtgtcggggtcgtcgtcaagtagcgatcgcgcgagg 62
           |||||||||||||||| ||| |||| |||||||||||||| ||| |||||| ||||||||
Sbjct: 479 cggttgtcgacagcgctcgcagatgcgtcggggtcgtcgtgaag-agcgattgcgcgagg 421

                                                                       
Query: 63  gcttcacatgggtcaaggacgaagattgcagatgtgatgacatctccagcaatcacgcta 122
           |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gcttcacatgggccaaagacgaagattgcagatgtgatgacatctccagcaatcacgcta 361

                                                                       
Query: 123 tcatgcgataaaacagtgaccgatgccgcagctctgatgctcaagaagaagatccacaga 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tcatgcgataaaacagtgaccgatgccgcagctctgatgctcaagaagaagatccacaga 301

                                                                       
Query: 183 ttaccgatagtaaaccaggacaatcaagtaataggtatagttacccgcgatgacgttctt 242
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 300 ttaccgatagtaaaccaggacaatcaagtaataggtatagttacccgcgacgacgttctt 241

                                                                       
Query: 243 cgcgcgttggaggccatgctgaagttttagaggcgcaggagcccatgcccggtacttgtg 302
           ||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||
Sbjct: 240 cgcgcgttggaggccatgctgaagttttagagatgcaggagtccatgcccggtacttgtg 181

                                                                       
Query: 303 gatctgtaaatatgtgtgtccgcggtacttttgagtagcaggcagatcctatag-atgta 361
           |||||||||||||||||||||||||| |||||||||||||||||||| ||||||  ||||
Sbjct: 180 gatctgtaaatatgtgtgtccgcggtgcttttgagtagcaggcagat-ctatagtctgta 122

                                                                       
Query: 362 aaagtgtttgtagcctgtatcgcaaaaatatgcctgggagcatttaggagagcttttcct 421
           |||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||||||
Sbjct: 121 aaagtg-ttgtagcctgtatcgcaaaaataagcctgggaacttttaggagagcttttcct 63

                                       
Query: 422 tgtaaagaagcacgccaggaagattctg 449
           |||||||||||||||| ||||| |||||
Sbjct: 62  tgtaaagaagcacgcccggaagcttctg 35



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>ref|XM_507550.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 916

 Score =  202 bits (102), Expect = 7e-49
 Identities = 186/214 (86%)
 Strand = Plus / Plus

                                                                       
Query: 60  agggcttcacatgggtcaaggacgaagattgcagatgtgatgacatctccagcaatcacg 119
           |||||||| |||||||||| ||||||||||||||| |||||||| |||||||| ||||| 
Sbjct: 477 agggcttctcatgggtcaaagacgaagattgcagaagtgatgacctctccagccatcact 536

                                                                       
Query: 120 ctatcatgcgataaaacagtgaccgatgccgcagctctgatgctcaagaagaagatccac 179
           ||| |||  || |||||||| |  ||||| |||||||||||||| |||||||||||||||
Sbjct: 537 ctaccatctgacaaaacagtaatggatgcggcagctctgatgctaaagaagaagatccac 596

                                                                       
Query: 180 agattaccgatagtaaaccaggacaatcaagtaataggtatagttacccgcgatgacgtt 239
           |||||||| || ||||| |||||||  ||||| ||||||||||||||||| | |||||||
Sbjct: 597 agattaccaattgtaaatcaggacagacaagtgataggtatagttacccgtgctgacgtt 656

                                             
Query: 240 cttcgcgcgttggaggccatgctgaagttttaga 273
           ||||||| |||||| ||| ||||| || ||||||
Sbjct: 657 cttcgcgagttggaagccctgctggaggtttaga 690



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>ref|XM_507549.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 1002

 Score =  202 bits (102), Expect = 7e-49
 Identities = 186/214 (86%)
 Strand = Plus / Plus

                                                                       
Query: 60  agggcttcacatgggtcaaggacgaagattgcagatgtgatgacatctccagcaatcacg 119
           |||||||| |||||||||| ||||||||||||||| |||||||| |||||||| ||||| 
Sbjct: 477 agggcttctcatgggtcaaagacgaagattgcagaagtgatgacctctccagccatcact 536

                                                                       
Query: 120 ctatcatgcgataaaacagtgaccgatgccgcagctctgatgctcaagaagaagatccac 179
           ||| |||  || |||||||| |  ||||| |||||||||||||| |||||||||||||||
Sbjct: 537 ctaccatctgacaaaacagtaatggatgcggcagctctgatgctaaagaagaagatccac 596

                                                                       
Query: 180 agattaccgatagtaaaccaggacaatcaagtaataggtatagttacccgcgatgacgtt 239
           |||||||| || ||||| |||||||  ||||| ||||||||||||||||| | |||||||
Sbjct: 597 agattaccaattgtaaatcaggacagacaagtgataggtatagttacccgtgctgacgtt 656

                                             
Query: 240 cttcgcgcgttggaggccatgctgaagttttaga 273
           ||||||| |||||| ||| ||||| || ||||||
Sbjct: 657 cttcgcgagttggaagccctgctggaggtttaga 690



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>ref|XM_507051.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 956

 Score =  202 bits (102), Expect = 7e-49
 Identities = 186/214 (86%)
 Strand = Plus / Plus

                                                                       
Query: 60  agggcttcacatgggtcaaggacgaagattgcagatgtgatgacatctccagcaatcacg 119
           |||||||| |||||||||| ||||||||||||||| |||||||| |||||||| ||||| 
Sbjct: 483 agggcttctcatgggtcaaagacgaagattgcagaagtgatgacctctccagccatcact 542

                                                                       
Query: 120 ctatcatgcgataaaacagtgaccgatgccgcagctctgatgctcaagaagaagatccac 179
           ||| |||  || |||||||| |  ||||| |||||||||||||| |||||||||||||||
Sbjct: 543 ctaccatctgacaaaacagtaatggatgcggcagctctgatgctaaagaagaagatccac 602

                                                                       
Query: 180 agattaccgatagtaaaccaggacaatcaagtaataggtatagttacccgcgatgacgtt 239
           |||||||| || ||||| |||||||  ||||| ||||||||||||||||| | |||||||
Sbjct: 603 agattaccaattgtaaatcaggacagacaagtgataggtatagttacccgtgctgacgtt 662

                                             
Query: 240 cttcgcgcgttggaggccatgctgaagttttaga 273
           ||||||| |||||| ||| ||||| || ||||||
Sbjct: 663 cttcgcgagttggaagccctgctggaggtttaga 696



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>ref|XM_468415.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 833

 Score =  202 bits (102), Expect = 7e-49
 Identities = 186/214 (86%)
 Strand = Plus / Plus

                                                                       
Query: 60  agggcttcacatgggtcaaggacgaagattgcagatgtgatgacatctccagcaatcacg 119
           |||||||| |||||||||| ||||||||||||||| |||||||| |||||||| ||||| 
Sbjct: 469 agggcttctcatgggtcaaagacgaagattgcagaagtgatgacctctccagccatcact 528

                                                                       
Query: 120 ctatcatgcgataaaacagtgaccgatgccgcagctctgatgctcaagaagaagatccac 179
           ||| |||  || |||||||| |  ||||| |||||||||||||| |||||||||||||||
Sbjct: 529 ctaccatctgacaaaacagtaatggatgcggcagctctgatgctaaagaagaagatccac 588

                                                                       
Query: 180 agattaccgatagtaaaccaggacaatcaagtaataggtatagttacccgcgatgacgtt 239
           |||||||| || ||||| |||||||  ||||| ||||||||||||||||| | |||||||
Sbjct: 589 agattaccaattgtaaatcaggacagacaagtgataggtatagttacccgtgctgacgtt 648

                                             
Query: 240 cttcgcgcgttggaggccatgctgaagttttaga 273
           ||||||| |||||| ||| ||||| || ||||||
Sbjct: 649 cttcgcgagttggaagccctgctggaggtttaga 682



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>gb|AY346465.1| Oryza sativa (indica cultivar-group) putative brown planthopper
            susceptibility protein Hd002A mRNA, complete cds
          Length = 1265

 Score =  202 bits (102), Expect = 7e-49
 Identities = 186/214 (86%)
 Strand = Plus / Plus

                                                                        
Query: 60   agggcttcacatgggtcaaggacgaagattgcagatgtgatgacatctccagcaatcacg 119
            |||||||| |||||||||| ||||||||||||||| |||||||| |||||||| ||||| 
Sbjct: 901  agggcttctcatgggtcaaagacgaagattgcagaagtgatgacctctccagccatcact 960

                                                                        
Query: 120  ctatcatgcgataaaacagtgaccgatgccgcagctctgatgctcaagaagaagatccac 179
            ||| |||  || |||||||| |  ||||| |||||||||||||| |||||||||||||||
Sbjct: 961  ctaccatctgacaaaacagtaatggatgcggcagctctgatgctaaagaagaagatccac 1020

                                                                        
Query: 180  agattaccgatagtaaaccaggacaatcaagtaataggtatagttacccgcgatgacgtt 239
            |||||||| || ||||| |||||||  ||||| ||||||||||||||||| | |||||||
Sbjct: 1021 agattaccaattgtaaatcaggacagacaagtgataggtatagttacccgtgctgacgtt 1080

                                              
Query: 240  cttcgcgcgttggaggccatgctgaagttttaga 273
            ||||||| |||||| ||| ||||| || ||||||
Sbjct: 1081 cttcgcgagttggaagccctgctggaggtttaga 1114



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>dbj|AK104947.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G08, full
           insert sequence
          Length = 833

 Score =  202 bits (102), Expect = 7e-49
 Identities = 186/214 (86%)
 Strand = Plus / Plus

                                                                       
Query: 60  agggcttcacatgggtcaaggacgaagattgcagatgtgatgacatctccagcaatcacg 119
           |||||||| |||||||||| ||||||||||||||| |||||||| |||||||| ||||| 
Sbjct: 469 agggcttctcatgggtcaaagacgaagattgcagaagtgatgacctctccagccatcact 528

                                                                       
Query: 120 ctatcatgcgataaaacagtgaccgatgccgcagctctgatgctcaagaagaagatccac 179
           ||| |||  || |||||||| |  ||||| |||||||||||||| |||||||||||||||
Sbjct: 529 ctaccatctgacaaaacagtaatggatgcggcagctctgatgctaaagaagaagatccac 588

                                                                       
Query: 180 agattaccgatagtaaaccaggacaatcaagtaataggtatagttacccgcgatgacgtt 239
           |||||||| || ||||| |||||||  ||||| ||||||||||||||||| | |||||||
Sbjct: 589 agattaccaattgtaaatcaggacagacaagtgataggtatagttacccgtgctgacgtt 648

                                             
Query: 240 cttcgcgcgttggaggccatgctgaagttttaga 273
           ||||||| |||||| ||| ||||| || ||||||
Sbjct: 649 cttcgcgagttggaagccctgctggaggtttaga 682



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>dbj|AK104525.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H03, full
           insert sequence
          Length = 994

 Score =  202 bits (102), Expect = 7e-49
 Identities = 186/214 (86%)
 Strand = Plus / Plus

                                                                       
Query: 60  agggcttcacatgggtcaaggacgaagattgcagatgtgatgacatctccagcaatcacg 119
           |||||||| |||||||||| ||||||||||||||| |||||||| |||||||| ||||| 
Sbjct: 469 agggcttctcatgggtcaaagacgaagattgcagaagtgatgacctctccagccatcact 528

                                                                       
Query: 120 ctatcatgcgataaaacagtgaccgatgccgcagctctgatgctcaagaagaagatccac 179
           ||| |||  || |||||||| |  ||||| |||||||||||||| |||||||||||||||
Sbjct: 529 ctaccatctgacaaaacagtaatggatgcggcagctctgatgctaaagaagaagatccac 588

                                                                       
Query: 180 agattaccgatagtaaaccaggacaatcaagtaataggtatagttacccgcgatgacgtt 239
           |||||||| || ||||| |||||||  ||||| ||||||||||||||||| | |||||||
Sbjct: 589 agattaccaattgtaaatcaggacagacaagtgataggtatagttacccgtgctgacgtt 648

                                             
Query: 240 cttcgcgcgttggaggccatgctgaagttttaga 273
           ||||||| |||||| ||| ||||| || ||||||
Sbjct: 649 cttcgcgagttggaagccctgctggaggtttaga 682



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>dbj|AK104684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B10, full
           insert sequence
          Length = 916

 Score =  202 bits (102), Expect = 7e-49
 Identities = 186/214 (86%)
 Strand = Plus / Plus

                                                                       
Query: 60  agggcttcacatgggtcaaggacgaagattgcagatgtgatgacatctccagcaatcacg 119
           |||||||| |||||||||| ||||||||||||||| |||||||| |||||||| ||||| 
Sbjct: 477 agggcttctcatgggtcaaagacgaagattgcagaagtgatgacctctccagccatcact 536

                                                                       
Query: 120 ctatcatgcgataaaacagtgaccgatgccgcagctctgatgctcaagaagaagatccac 179
           ||| |||  || |||||||| |  ||||| |||||||||||||| |||||||||||||||
Sbjct: 537 ctaccatctgacaaaacagtaatggatgcggcagctctgatgctaaagaagaagatccac 596

                                                                       
Query: 180 agattaccgatagtaaaccaggacaatcaagtaataggtatagttacccgcgatgacgtt 239
           |||||||| || ||||| |||||||  ||||| ||||||||||||||||| | |||||||
Sbjct: 597 agattaccaattgtaaatcaggacagacaagtgataggtatagttacccgtgctgacgtt 656

                                             
Query: 240 cttcgcgcgttggaggccatgctgaagttttaga 273
           ||||||| |||||| ||| ||||| || ||||||
Sbjct: 657 cttcgcgagttggaagccctgctggaggtttaga 690



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>dbj|AK104103.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B08, full
           insert sequence
          Length = 1002

 Score =  202 bits (102), Expect = 7e-49
 Identities = 186/214 (86%)
 Strand = Plus / Plus

                                                                       
Query: 60  agggcttcacatgggtcaaggacgaagattgcagatgtgatgacatctccagcaatcacg 119
           |||||||| |||||||||| ||||||||||||||| |||||||| |||||||| ||||| 
Sbjct: 477 agggcttctcatgggtcaaagacgaagattgcagaagtgatgacctctccagccatcact 536

                                                                       
Query: 120 ctatcatgcgataaaacagtgaccgatgccgcagctctgatgctcaagaagaagatccac 179
           ||| |||  || |||||||| |  ||||| |||||||||||||| |||||||||||||||
Sbjct: 537 ctaccatctgacaaaacagtaatggatgcggcagctctgatgctaaagaagaagatccac 596

                                                                       
Query: 180 agattaccgatagtaaaccaggacaatcaagtaataggtatagttacccgcgatgacgtt 239
           |||||||| || ||||| |||||||  ||||| ||||||||||||||||| | |||||||
Sbjct: 597 agattaccaattgtaaatcaggacagacaagtgataggtatagttacccgtgctgacgtt 656

                                             
Query: 240 cttcgcgcgttggaggccatgctgaagttttaga 273
           ||||||| |||||| ||| ||||| || ||||||
Sbjct: 657 cttcgcgagttggaagccctgctggaggtttaga 690



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>dbj|AK071580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106O04, full
           insert sequence
          Length = 1514

 Score =  202 bits (102), Expect = 7e-49
 Identities = 186/214 (86%)
 Strand = Plus / Plus

                                                                       
Query: 60  agggcttcacatgggtcaaggacgaagattgcagatgtgatgacatctccagcaatcacg 119
           |||||||| |||||||||| ||||||||||||||| |||||||| |||||||| ||||| 
Sbjct: 470 agggcttctcatgggtcaaagacgaagattgcagaagtgatgacctctccagccatcact 529

                                                                       
Query: 120 ctatcatgcgataaaacagtgaccgatgccgcagctctgatgctcaagaagaagatccac 179
           ||| |||  || |||||||| |  ||||| |||||||||||||| |||||||||||||||
Sbjct: 530 ctaccatctgacaaaacagtaatggatgcggcagctctgatgctaaagaagaagatccac 589

                                                                       
Query: 180 agattaccgatagtaaaccaggacaatcaagtaataggtatagttacccgcgatgacgtt 239
           |||||||| || ||||| |||||||  ||||| ||||||||||||||||| | |||||||
Sbjct: 590 agattaccaattgtaaatcaggacagacaagtgataggtatagttacccgtgctgacgtt 649

                                             
Query: 240 cttcgcgcgttggaggccatgctgaagttttaga 273
           ||||||| |||||| ||| ||||| || ||||||
Sbjct: 650 cttcgcgagttggaagccctgctggaggtttaga 683



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>dbj|AK065134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P24, full
           insert sequence
          Length = 955

 Score =  202 bits (102), Expect = 7e-49
 Identities = 186/214 (86%)
 Strand = Plus / Plus

                                                                       
Query: 60  agggcttcacatgggtcaaggacgaagattgcagatgtgatgacatctccagcaatcacg 119
           |||||||| |||||||||| ||||||||||||||| |||||||| |||||||| ||||| 
Sbjct: 482 agggcttctcatgggtcaaagacgaagattgcagaagtgatgacctctccagccatcact 541

                                                                       
Query: 120 ctatcatgcgataaaacagtgaccgatgccgcagctctgatgctcaagaagaagatccac 179
           ||| |||  || |||||||| |  ||||| |||||||||||||| |||||||||||||||
Sbjct: 542 ctaccatctgacaaaacagtaatggatgcggcagctctgatgctaaagaagaagatccac 601

                                                                       
Query: 180 agattaccgatagtaaaccaggacaatcaagtaataggtatagttacccgcgatgacgtt 239
           |||||||| || ||||| |||||||  ||||| ||||||||||||||||| | |||||||
Sbjct: 602 agattaccaattgtaaatcaggacagacaagtgataggtatagttacccgtgctgacgtt 661

                                             
Query: 240 cttcgcgcgttggaggccatgctgaagttttaga 273
           ||||||| |||||| ||| ||||| || ||||||
Sbjct: 662 cttcgcgagttggaagccctgctggaggtttaga 695



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>gb|AY346466.1| Oryza sativa (indica cultivar-group) brown planthopper-induced
           resistance protein 1 (Bi1) mRNA, complete cds
          Length = 1098

 Score =  188 bits (95), Expect = 1e-44
 Identities = 186/215 (86%), Gaps = 1/215 (0%)
 Strand = Plus / Plus

                                                                       
Query: 60  agggcttcacatgggtcaaggacgaagattgcagatgtgatgacatctccagcaatcacg 119
           |||||||| |||||||||| ||||||||||||||| |||||||| |||||||| ||||| 
Sbjct: 735 agggcttctcatgggtcaaagacgaagattgcagaagtgatgacctctccagccatcact 794

                                                                       
Query: 120 ctatcatgcgataaaacagtgaccgatgccgcagctctgatgctcaagaagaa-gatcca 178
           ||| |||  || |||||||| |  ||||| |||||||||||||| |||||||| ||||||
Sbjct: 795 ctaccatctgacaaaacagtaatggatgcggcagctctgatgctaaagaagaaggatcca 854

                                                                       
Query: 179 cagattaccgatagtaaaccaggacaatcaagtaataggtatagttacccgcgatgacgt 238
           ||||||||| || ||||| |||||||  ||||| ||||||||||||||||| | ||||||
Sbjct: 855 cagattaccaattgtaaatcaggacagacaagtgataggtatagttacccgtgctgacgt 914

                                              
Query: 239 tcttcgcgcgttggaggccatgctgaagttttaga 273
           |||||||| |||||| ||| ||||| || ||||||
Sbjct: 915 tcttcgcgagttggaagccctgctggaggtttaga 949



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>gb|AY112171.1| Zea mays CL11049_1 mRNA sequence
          Length = 803

 Score =  141 bits (71), Expect = 2e-30
 Identities = 220/270 (81%), Gaps = 1/270 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   cggttgtcgacagcgcccgccgatgtgtcggggtcgtcgtcaagtagcgatcgcgcgagg 62
           |||| |||||||||| || | |||| ||||||||  |||||||| | ||| || || || 
Sbjct: 326 cggtcgtcgacagcggcctcagatgcgtcggggtgatcgtcaagaa-cgaccgggcaaga 384

                                                                       
Query: 63  gcttcacatgggtcaaggacgaagattgcagatgtgatgacatctccagcaatcacgcta 122
           || || |||||||| | |||||||||  | || ||||||||||||||||| ||||| |||
Sbjct: 385 gcctctcatgggtccaagacgaagatatcggaagtgatgacatctccagctatcacacta 444

                                                                       
Query: 123 tcatgcgataaaacagtgaccgatgccgcagctctgatgctcaagaagaagatccacaga 182
           || |  || ||||| ||||  ||||| || | ||| ||||||||||||||||||||||||
Sbjct: 445 tcgtctgacaaaaccgtgatggatgctgctgttctcatgctcaagaagaagatccacaga 504

                                                                       
Query: 183 ttaccgatagtaaaccaggacaatcaagtaataggtatagttacccgcgatgacgttctt 242
           |||||  | ||||||||||||      |||||||||||||||||||||| ||| ||||||
Sbjct: 505 ttaccagttgtaaaccaggacgnnnnngtaataggtatagttacccgcgctgatgttctt 564

                                         
Query: 243 cgcgcgttggaggccatgctgaagttttag 272
           |||| |||||| | |||| ||||| |||||
Sbjct: 565 cgcgtgttggaaggcatgttgaagatttag 594



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                            
Query: 144      gatgccgcagctctgatgctcaagaagaagatccacagattaccgatagtaaaccaggac 203
                ||||| |||||||||||||| ||||||||||||||||||||||| || ||||| ||||||
Sbjct: 35111716 gatgcggcagctctgatgctaaagaagaagatccacagattaccaattgtaaatcaggac 35111775

                               
Query: 204      aatcaagtaataggt 218
                |  ||||| ||||||
Sbjct: 35111776 agacaagtgataggt 35111790



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                           
Query: 215      aggtatagttacccgcgatgacgttcttcgcgcgttggaggccatgctgaagttttaga 273
                ||||||||||||||| | |||||||||||||| |||||| ||| ||||| || ||||||
Sbjct: 35111919 aggtatagttacccgtgctgacgttcttcgcgagttggaagccctgctggaggtttaga 35111977



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                            
Query: 74       gtcaaggacgaagattgcagatgtgatgacatctccagcaatcacgctatcatgcgataa 133
                ||||| ||||||||||||||| |||||||| |||||||| ||||| ||| |||  || ||
Sbjct: 35111556 gtcaaagacgaagattgcagaagtgatgacctctccagccatcactctaccatctgacaa 35111615

                      
Query: 134      aacagt 139
                ||||||
Sbjct: 35111616 aacagt 35111621



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>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1202_E07
          Length = 145014

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                        
Query: 144  gatgccgcagctctgatgctcaagaagaagatccacagattaccgatagtaaaccaggac 203
            ||||| |||||||||||||| ||||||||||||||||||||||| || ||||| ||||||
Sbjct: 7072 gatgcggcagctctgatgctaaagaagaagatccacagattaccaattgtaaatcaggac 7131

                           
Query: 204  aatcaagtaataggt 218
            |  ||||| ||||||
Sbjct: 7132 agacaagtgataggt 7146



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                       
Query: 215  aggtatagttacccgcgatgacgttcttcgcgcgttggaggccatgctgaagttttaga 273
            ||||||||||||||| | |||||||||||||| |||||| ||| ||||| || ||||||
Sbjct: 7275 aggtatagttacccgtgctgacgttcttcgcgagttggaagccctgctggaggtttaga 7333



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                        
Query: 74   gtcaaggacgaagattgcagatgtgatgacatctccagcaatcacgctatcatgcgataa 133
            ||||| ||||||||||||||| |||||||| |||||||| ||||| ||| |||  || ||
Sbjct: 6912 gtcaaagacgaagattgcagaagtgatgacctctccagccatcactctaccatctgacaa 6971

                  
Query: 134  aacagt 139
            ||||||
Sbjct: 6972 aacagt 6977



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>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1136_C12
          Length = 103973

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                         
Query: 144   gatgccgcagctctgatgctcaagaagaagatccacagattaccgatagtaaaccaggac 203
             ||||| |||||||||||||| ||||||||||||||||||||||| || ||||| ||||||
Sbjct: 84879 gatgcggcagctctgatgctaaagaagaagatccacagattaccaattgtaaatcaggac 84938

                            
Query: 204   aatcaagtaataggt 218
             |  ||||| ||||||
Sbjct: 84939 agacaagtgataggt 84953



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                        
Query: 215   aggtatagttacccgcgatgacgttcttcgcgcgttggaggccatgctgaagttttaga 273
             ||||||||||||||| | |||||||||||||| |||||| ||| ||||| || ||||||
Sbjct: 85082 aggtatagttacccgtgctgacgttcttcgcgagttggaagccctgctggaggtttaga 85140



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                         
Query: 74    gtcaaggacgaagattgcagatgtgatgacatctccagcaatcacgctatcatgcgataa 133
             ||||| ||||||||||||||| |||||||| |||||||| ||||| ||| |||  || ||
Sbjct: 84719 gtcaaagacgaagattgcagaagtgatgacctctccagccatcactctaccatctgacaa 84778

                   
Query: 134   aacagt 139
             ||||||
Sbjct: 84779 aacagt 84784



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>dbj|AK068163.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135B04, full
            insert sequence
          Length = 4217

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                        
Query: 144  gatgccgcagctctgatgctcaagaagaagatccacagattaccgatagtaaaccaggac 203
            ||||| |||||||||||||| ||||||||||||||||||||||| || ||||| ||||||
Sbjct: 2474 gatgcggcagctctgatgctaaagaagaagatccacagattaccaattgtaaatcaggac 2415

                           
Query: 204  aatcaagtaataggt 218
            |  ||||| ||||||
Sbjct: 2414 agacaagtgataggt 2400



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 215  aggtatagttacccgcgatgacgttcttcgcgcgttggaggccatgctgaagttttaga 273
            ||||||||||||||| | |||||||||||||| |||||| ||| ||||| || ||||||
Sbjct: 2271 aggtatagttacccgtgctgacgttcttcgcgagttggaagccctgctggaggtttaga 2213



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 74   gtcaaggacgaagattgcagatgtgatgacatctccagcaatcacgctatcatgcgataa 133
            ||||| ||||||||||||||| |||||||| |||||||| ||||| ||| |||  || ||
Sbjct: 2634 gtcaaagacgaagattgcagaagtgatgacctctccagccatcactctaccatctgacaa 2575

                  
Query: 134  aacagt 139
            ||||||
Sbjct: 2574 aacagt 2569



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>gb|AC037492.5|AC037492 Homo sapiens chromosome 8, clone RP11-38H17, complete sequence
          Length = 168278

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 349    tcctatagatgtaaaagtgttt 370
              ||||||||||||||||||||||
Sbjct: 101188 tcctatagatgtaaaagtgttt 101167



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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 8       gtcgacagcgcccgccgatg 27
               ||||||||||||||||||||
Sbjct: 1917145 gtcgacagcgcccgccgatg 1917126



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>ref|XM_841417.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.1.4760)
            partial mRNA
          Length = 3087

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  tcaagaagaagatccacaga 182
            ||||||||||||||||||||
Sbjct: 1397 tcaagaagaagatccacaga 1378



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>gb|AC018738.4| Homo sapiens BAC clone RP11-419H23 from 2, complete sequence
          Length = 178530

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    agctctgatgctcaagaaga 171
              ||||||||||||||||||||
Sbjct: 171517 agctctgatgctcaagaaga 171536



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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete
             sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     gtcgacagcgcccgccgatg 27
             ||||||||||||||||||||
Sbjct: 75856 gtcgacagcgcccgccgatg 75837



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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 8       gtcgacagcgcccgccgatg 27
               ||||||||||||||||||||
Sbjct: 2567252 gtcgacagcgcccgccgatg 2567233



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>gb|AF131950.1| Human papillomavirus candHPV85, complete genome
          Length = 7812

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tttgtagcctgtatcgcaaa 387
            ||||||||||||||||||||
Sbjct: 3753 tttgtagcctgtatcgcaaa 3734



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>gb|AC008750.9| Homo sapiens chromosome 19 clone CTD-2616J11, complete sequence
          Length = 143045

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   ctgggagcatttaggagagc 414
             ||||||||||||||||||||
Sbjct: 76793 ctgggagcatttaggagagc 76812



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>gb|AE004451.1| Pseudomonas aeruginosa PAO1, section 12 of 529 of the complete genome
          Length = 10700

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 230  cgatgacgttcttcgcgcgttggaggcc 257
            |||||||||||||||||| ||| |||||
Sbjct: 2200 cgatgacgttcttcgcgccttgcaggcc 2227



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>dbj|AP002347.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2514A21, complete
              sequence
          Length = 130977

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 298    ttgtggatctgtaaatatgt 317
              ||||||||||||||||||||
Sbjct: 119967 ttgtggatctgtaaatatgt 119986



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>dbj|AP000790.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-736I10, complete
             sequence
          Length = 176944

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   ttgtggatctgtaaatatgt 317
             ||||||||||||||||||||
Sbjct: 30103 ttgtggatctgtaaatatgt 30122


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,472,895
Number of Sequences: 3902068
Number of extensions: 3472895
Number of successful extensions: 59659
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59536
Number of HSP's gapped (non-prelim): 115
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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