ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd24n13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1112 bits (561), Expect = 0.0 Identities = 587/592 (99%), Gaps = 3/592 (0%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 119709 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 119651 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119650 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119592 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119591 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 119532 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119531 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 119472 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119471 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 119412 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119411 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 119352 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119351 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 119292 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119291 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 119232 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119231 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 119172 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119171 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 119120 Score = 1112 bits (561), Expect = 0.0 Identities = 587/592 (99%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 95185 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 95243 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95244 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 95302 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95303 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 95362 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95363 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 95422 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95423 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 95482 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95483 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 95542 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95543 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 95602 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95603 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 95662 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95663 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 95722 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95723 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 95774
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 118490 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 118432 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118431 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 118373 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118372 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 118313 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118312 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 118253 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118252 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 118193 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118192 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 118133 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118132 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 118073 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118072 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 118013 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118012 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 117953 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117952 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 117901
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 119574 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 119516 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119515 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119457 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119456 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 119397 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119396 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 119337 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119336 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 119277 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119276 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 119217 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119216 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 119157 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119156 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 119097 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119096 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 119037 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119036 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 118985 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 95582 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 95640 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95641 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 95699 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95700 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 95759 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95760 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 95819 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95820 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 95879 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95880 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 95939 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95940 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 95999 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96000 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 96059 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96060 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 96119 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96120 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 96171
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 119574 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 119516 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119515 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119457 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119456 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 119397 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119396 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 119337 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119336 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 119277 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119276 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 119217 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119216 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 119157 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119156 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 119097 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119096 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 119037 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119036 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 118985 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 95582 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 95640 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95641 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 95699 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95700 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 95759 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95760 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 95819 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95820 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 95879 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95880 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 95939 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95940 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 95999 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96000 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 96059 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96060 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 96119 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96120 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 96171
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 119523 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 119465 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119464 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119406 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119405 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 119346 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119345 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 119286 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119285 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 119226 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119225 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 119166 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119165 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 119106 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119105 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 119046 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119045 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 118986 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118985 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 118934 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 95527 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 95585 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95586 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 95644 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95645 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 95704 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95705 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 95764 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95765 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 95824 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95825 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 95884 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95885 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 95944 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95945 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 96004 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96005 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 96064 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96065 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 96116
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 31508160 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 31508218 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508219 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 31508277 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508278 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 31508337 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508338 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 31508397 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508398 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 31508457 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508458 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 31508517 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508518 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 31508577 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508578 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 31508637 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508638 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 31508697 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508698 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 31508749 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 545 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 |||| ||||||||||||||| |||||| |||||| || |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacc 35945487
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 84436 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 84378 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84377 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 84319 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84318 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 84259 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84258 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 84199 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84198 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 84139 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84138 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 84079 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84078 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 84019 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84018 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 83959 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83958 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 83899 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83898 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 83847
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 119543 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 119485 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119484 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119426 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119425 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 119366 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119365 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 119306 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119305 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 119246 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119245 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 119186 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119185 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 119126 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119125 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 119066 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119065 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 119006 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119005 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 118954 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 95575 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 95633 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95634 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 95692 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95693 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 95752 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95753 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 95812 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95813 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 95872 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95873 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 95932 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95933 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 95992 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95993 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 96052 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96053 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 96112 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96113 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 96164
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 58262 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 58204 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58203 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 58145 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58144 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 58085 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58084 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 58025 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58024 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 57965 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57964 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 57905 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57904 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 57845 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57844 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 57785 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57784 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 57725 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57724 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 57673
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 9268509 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 9268567 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268568 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 9268626 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268627 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 9268686 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268687 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 9268746 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268747 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 9268806 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268807 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 9268866 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268867 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 9268926 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268927 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 9268986 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268987 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 9269046 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269047 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 9269098 Score = 1096 bits (553), Expect = 0.0 Identities = 585/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 9228009 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 9228067 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228068 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 9228126 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228127 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 9228186 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228187 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 9228246 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228247 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 9228306 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 9228307 tcttcatagggcgattgtcactgcttatggacccgaacctaggtgatctatccatgacca 9228366 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228367 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 9228426 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228427 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 9228486 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228487 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 9228546 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228547 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 9228598 Score = 1096 bits (553), Expect = 0.0 Identities = 585/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 9056423 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcctgtgtgaatcagca 9056481 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056482 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 9056540 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056541 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 9056600 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056601 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 9056660 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056661 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 9056720 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056721 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 9056780 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056781 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 9056840 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056841 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 9056900 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056901 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 9056960 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056961 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 9057012 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 9164598 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 9164656 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164657 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 9164715 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164716 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 9164775 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164776 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 9164835 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164836 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 9164895 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 9164896 tcttcatagggcgattgtcactgcttatggacccgaa-ctaggtgatctatccatgacca 9164954 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164955 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 9165014 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165015 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 9165074 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165075 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 9165134 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165135 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 9165186 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 91 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 150 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 151 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 197 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 19938494 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 19938552 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938553 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 19938611 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938612 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 19938671 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938672 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 19938731 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938732 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 19938791 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938792 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 19938851 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938852 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 19938911 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938912 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 19938971 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938972 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 19939031 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939032 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 19939083 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 10276937 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 10276879 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276878 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 10276820 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276819 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 10276760 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276759 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 10276700 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276699 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 10276640 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276639 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 10276580 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276579 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 10276520 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276519 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 10276460 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276459 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 10276400 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276399 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 10276348 Score = 1096 bits (553), Expect = 0.0 Identities = 585/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 10387361 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 10387419 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387420 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 10387478 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387479 ggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 10387538 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387539 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 10387598 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387599 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 10387658 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387659 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 10387718 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387719 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 10387778 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387779 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 10387838 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387839 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 10387898 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387899 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 10387950 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 109 agtaccgtgagggaaaggtgaaaagaacccc 139 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 552 gtaccaaatcgaggcaaactctgaatactagatatgac 589 ||||||||||||| |||| ||| |||||||||| |||| Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtgac 781090
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 31598676 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 31598734 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598735 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 31598793 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598794 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 31598853 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598854 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 31598913 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598914 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 31598973 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598974 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 31599033 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599034 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 31599093 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599094 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 31599153 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599154 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 31599213 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599214 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 31599265 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 545 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 |||| ||||||||||||||| |||||| |||||| || |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacc 36035561
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 33525992 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 33526050 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526051 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 33526109 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526110 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 33526169 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526170 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 33526229 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526230 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 33526289 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526290 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 33526349 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526350 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 33526409 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526410 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 33526469 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526470 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 33526529 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526530 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 33526581 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 113 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 172 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 173 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 232 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 233 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 127 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 186 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 187 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 236 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 93 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 139 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 93 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 139 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 158 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 47549 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 47491 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47490 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 47432 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47431 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 47372 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47371 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 47312 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47311 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 47252 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47251 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 47192 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47191 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 47132 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47131 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 47072 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47071 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 47012 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47011 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 46960
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 71189 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 71247 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71248 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 71306 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71307 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 71366 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71367 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 71426 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71427 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 71486 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71487 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 71546 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71547 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 71606 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71607 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 71666 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71667 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 71726 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71727 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 71778 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 93 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 139 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 93 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 139 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 153 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 211 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 270 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 271 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 330 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 331 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 390 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 391 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 450 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 510 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 570 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 571 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 630 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 631 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 690 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 691 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 742
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 361 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 419 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 478 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 538 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 599 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 658 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 718 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 719 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 778 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 779 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 838 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 839 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 898 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 899 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 950
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 156 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 214 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 215 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 273 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 333 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 393 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 453 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 513 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 573 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 633 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 634 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 693 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 745
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 268 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 326 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 385 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 445 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 446 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 505 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 506 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 565 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 566 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 625 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 626 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 685 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 686 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 745 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 805 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 806 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 857
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 27 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 85 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 144 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 204 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 264 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 324 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 325 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 384 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 444 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 504 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 505 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 564 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 616
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 158 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 216 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 275 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 335 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 336 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 395 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 455 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 456 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 515 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 516 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 575 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 576 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 635 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 636 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 695 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 696 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 747
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 156 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 214 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 215 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 273 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 333 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 393 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 453 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 513 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 573 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 633 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 634 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 693 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 745
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 158 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 216 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 275 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 335 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 336 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 395 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 455 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 456 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 515 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 516 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 575 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 576 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 635 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 636 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 695 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 696 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 747
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 19949770 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 19949828 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949829 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 19949887 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949888 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 19949947 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949948 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 19950007 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950008 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 19950067 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950068 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 19950127 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950128 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 19950187 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950188 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 19950247 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950248 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 19950307 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950308 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 19950359 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 10282976 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 10282918 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282917 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 10282859 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282858 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 10282799 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282798 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 10282739 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282738 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 10282679 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282678 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 10282619 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282618 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 10282559 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282558 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 10282499 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282498 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 10282439 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282438 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 10282387 Score = 1096 bits (553), Expect = 0.0 Identities = 585/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 10393400 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 10393458 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393459 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 10393517 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393518 ggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 10393577 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393578 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 10393637 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393638 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 10393697 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393698 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 10393757 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393758 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 10393817 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393818 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 10393877 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393878 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 10393937 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393938 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 10393989 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 93 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 139 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 552 gtaccaaatcgaggcaaactctgaatactagatatgac 589 ||||||||||||| |||| ||| |||||||||| |||| Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtgac 781087
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 119517 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 119459 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119458 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119400 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119399 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 119340 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119339 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 119280 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119279 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 119220 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119219 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 119160 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119159 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 119100 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119099 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 119040 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119039 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 118980 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118979 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 118928 Score = 1104 bits (557), Expect = 0.0 Identities = 586/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 95522 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 95580 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95581 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 95639 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95640 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 95699 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95700 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 95759 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95760 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 95819 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95820 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 95879 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95880 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 95939 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95940 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 95999 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96000 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 96059 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96060 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 96111
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1096 bits (553), Expect = 0.0 Identities = 585/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 620 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 562 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 503 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 502 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 443 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 383 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382 actcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgag 323 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 322 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 263 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 203 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 143 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 83 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 31
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1096 bits (553), Expect = 0.0 Identities = 585/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 14349 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcctgtgtgaatcagca 14407 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14408 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 14466 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14467 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 14526 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14527 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 14586 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14587 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 14646 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14647 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 14706 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14707 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 14766 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14767 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 14826 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14827 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 14886 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14887 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 14938 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 122624 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 122682 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122683 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 122741 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122742 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 122801 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122802 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 122861 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122862 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 122921 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 122922 tcttcatagggcgattgtcactgcttatggacccgaa-ctaggtgatctatccatgacca 122980 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122981 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 123040 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123041 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 123100 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123101 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 123160 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123161 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 123212
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1096 bits (553), Expect = 0.0 Identities = 585/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 141157 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcctgtgtgaatcagca 141215 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141216 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 141274 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141275 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 141334 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141335 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 141394 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141395 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 141454 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141455 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 141514 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141515 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 141574 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141575 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 141634 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141635 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 141694 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141695 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 141746
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1096 bits (553), Expect = 0.0 Identities = 585/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 93753 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 93811 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93812 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 93870 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93871 ggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 93930 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93931 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 93990 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93991 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 94050 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94051 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 94110 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94111 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 94170 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94171 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 94230 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94231 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 94290 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94291 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 94342
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1096 bits (553), Expect = 0.0 Identities = 585/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 20584 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 20642 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20643 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 20701 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20702 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 20761 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20762 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 20821 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 20822 actcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgag 20881 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20882 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 20941 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20942 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 21001 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21002 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 21061 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21062 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 21121 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21122 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 21173 Score = 1059 bits (534), Expect = 0.0 Identities = 582/593 (98%), Gaps = 4/593 (0%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 44534 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 44476 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44475 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 44417 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44416 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 44357 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44356 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 44297 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| Sbjct: 44296 actcataggcagtggcttggttaagggaatggaaccctccggagccgtagtgaaagcgag 44237 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44236 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 44177 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44176 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 44117 Query: 420 gatgagttgtggttaggggtg-aaatgccactcgaacccagagctagctggttctccccg 478 ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 44116 gatgagttgtggttaggggtgtaaatgccactcgaacccagagctagttggttctccccg 44057 Query: 479 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44056 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 43997 Query: 539 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43996 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 43944
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1096 bits (553), Expect = 0.0 Identities = 585/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 1163 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 1105 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1104 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 1046 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1045 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 986 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 985 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 926 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 925 actcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgag 866 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 865 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 806 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 805 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 746 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 686 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 685 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 626 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 625 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 574
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1096 bits (553), Expect = 0.0 Identities = 585/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 27817 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 27875 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27876 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 27934 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27935 ggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 27994 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27995 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 28054 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28055 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 28114 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28115 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 28174 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28175 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 28234 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28235 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 28294 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28295 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 28354 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28355 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 28406
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1096 bits (553), Expect = 0.0 Identities = 585/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 123373 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 123315 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123314 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 123256 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123255 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 123196 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123195 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 123136 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 123135 actcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgag 123076 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123075 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 123016 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123015 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 122956 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122955 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 122896 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122895 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 122836 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122835 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 122784 Score = 1096 bits (553), Expect = 0.0 Identities = 585/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 99464 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 99522 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99523 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 99581 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99582 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 99641 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99642 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 99701 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 99702 actcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgag 99761 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99762 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 99821 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99822 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 99881 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99882 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 99941 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99942 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 100001 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100002 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 100053
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1096 bits (553), Expect = 0.0 Identities = 585/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 155 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 213 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 272 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 332 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 392 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 452 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 512 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 513 ggatgaagcttggatgaaaccaagcagaggtccgaaccgactgatgttgaagaatcagcg 572 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 632 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 692 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 744
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1096 bits (553), Expect = 0.0 Identities = 585/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 124090 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 124032 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124031 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 123973 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123972 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 123913 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123912 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 123853 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 123852 actcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgag 123793 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123792 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 123733 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123732 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 123673 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123672 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 123613 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123612 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 123553 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123552 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 123501 Score = 1096 bits (553), Expect = 0.0 Identities = 585/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 100141 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 100199 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100200 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 100258 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100259 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 100318 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100319 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 100378 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 100379 actcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgag 100438 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100439 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 100498 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100499 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 100558 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100559 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 100618 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100619 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 100678 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100679 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 100730
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1088 bits (549), Expect = 0.0 Identities = 584/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 9241772 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 9241714 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241713 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 9241655 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241654 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 9241595 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 9241594 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcg 9241535 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241534 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 9241475 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241474 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 9241415 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 9241414 ggatgaagcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcg 9241355 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241354 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 9241295 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241294 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 9241235 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241234 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 9241183 Score = 101 bits (51), Expect = 3e-18 Identities = 69/75 (92%) Strand = Plus / Minus Query: 517 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 576 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 577 tactagatatgaccc 591 ||||||||||||||| Sbjct: 3580489 tactagatatgaccc 3580475
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1088 bits (549), Expect = 0.0 Identities = 584/592 (98%), Gaps = 3/592 (0%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 52985 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 52927 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52926 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 52868 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52867 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 52808 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 52807 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcg 52748 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52747 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 52688 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52687 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 52628 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 52627 ggatgaagcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcg 52568 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52567 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 52508 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52507 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 52448 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52447 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 52396
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1078 bits (544), Expect = 0.0 Identities = 564/568 (99%), Gaps = 2/568 (0%) Strand = Plus / Plus Query: 24 agcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaat 83 |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1 agcatggggcacgtgg-aatcccgtgtgaatcagcaagg-accaccttgcaaggctaaat 58 Query: 84 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 118 Query: 144 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 203 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119 gggtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 178 Query: 204 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 238 Query: 264 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 323 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 239 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 298 Query: 324 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 358 Query: 384 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 418 Query: 444 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 478 Query: 504 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 538 Query: 564 ggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||| Sbjct: 539 ggcaaactctgaatactagatatgaccc 566
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1072 bits (541), Expect = 0.0 Identities = 580/588 (98%), Gaps = 4/588 (0%) Strand = Plus / Minus Query: 5 gcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaaggn 63 ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 123309 gcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagcaagg- 123252 Query: 64 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123251 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 123192 Query: 124 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123191 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 123132 Query: 184 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123131 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 123072 Query: 244 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 303 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123071 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 123012 Query: 304 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123011 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 122952 Query: 364 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122951 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 122892 Query: 424 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122891 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 122832 Query: 484 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 122831 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctg 122773 Query: 544 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122772 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 122725 Score = 1072 bits (541), Expect = 0.0 Identities = 580/588 (98%), Gaps = 4/588 (0%) Strand = Plus / Plus Query: 5 gcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaaggn 63 ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 99428 gcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagcaagg- 99485 Query: 64 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99486 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 99545 Query: 124 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99546 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 99605 Query: 184 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99606 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 99665 Query: 244 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 303 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 99666 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 99725 Query: 304 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99726 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 99785 Query: 364 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99786 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 99845 Query: 424 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99846 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 99905 Query: 484 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 99906 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctg 99964 Query: 544 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99965 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 100012
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1072 bits (541), Expect = 0.0 Identities = 580/588 (98%), Gaps = 4/588 (0%) Strand = Plus / Plus Query: 5 gcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaaggn 63 ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 5781 gcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagcaagg- 5838 Query: 64 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5839 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 5898 Query: 124 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5899 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 5958 Query: 184 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5959 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 6018 Query: 244 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 303 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 6019 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 6078 Query: 304 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6079 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 6138 Query: 364 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6139 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 6198 Query: 424 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6199 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 6258 Query: 484 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 6259 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctg 6317 Query: 544 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6318 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 6365
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1072 bits (541), Expect = 0.0 Identities = 580/588 (98%), Gaps = 4/588 (0%) Strand = Plus / Plus Query: 5 gcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaaggn 63 ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 369 gcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagcaagg- 426 Query: 64 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 486 Query: 124 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 546 Query: 184 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 606 Query: 244 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 303 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 607 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 666 Query: 304 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 726 Query: 364 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 727 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 786 Query: 424 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 846 Query: 484 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 847 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctg 905 Query: 544 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 906 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 953
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1068 bits (539), Expect = 0.0 Identities = 549/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 41 aatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgat 100 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaagg-accaccttgcaaggctaaatactcctgggtgaccgat 59 Query: 101 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 119 Query: 161 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 179 Query: 221 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 239 Query: 281 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 340 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 240 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 299 Query: 341 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 359 Query: 401 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 419 Query: 461 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 479 Query: 521 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 539 Query: 581 agatatgaccc 591 ||||||||||| Sbjct: 540 agatatgaccc 550
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 1027 bits (518), Expect = 0.0 Identities = 546/553 (98%), Gaps = 3/553 (0%) Strand = Plus / Minus Query: 41 aatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgat 100 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 122815 aatcccgtgtgaatcagcaagg-accaccttgcaaggctaaatactcctgggtgaccgat 122757 Query: 101 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122756 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 122697 Query: 161 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122696 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 122637 Query: 221 gttgaagaatgagccggcgactcataggcagtg--gcttggttaagggaacggaacccac 278 ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 122636 gttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaacccac 122577 Query: 279 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 338 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 122576 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 122517 Query: 339 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 398 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 122516 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcgaaccg 122457 Query: 399 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122456 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 122397 Query: 459 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122396 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 122337 Query: 519 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 578 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 122336 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaata 122277 Query: 579 ctagatatgaccc 591 ||||||||||||| Sbjct: 122276 ctagatatgaccc 122264 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtgg 39 ||||||||| |||||| |||| ||||||||||||||||| Sbjct: 123107 actagcttacgctctgccccgagtagcatggggcacgtgg 123068
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 1027 bits (518), Expect = 0.0 Identities = 546/553 (98%), Gaps = 3/553 (0%) Strand = Plus / Minus Query: 41 aatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgat 100 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 12825356 aatcccgtgtgaatcagcaagg-accaccttgcaaggctaaatactcctgggtgaccgat 12825298 Query: 101 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825297 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 12825238 Query: 161 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825237 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 12825178 Query: 221 gttgaagaatgagccggcgactcataggcagtg--gcttggttaagggaacggaacccac 278 ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 12825177 gttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaacccac 12825118 Query: 279 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 338 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12825117 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 12825058 Query: 339 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 398 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 12825057 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcgaaccg 12824998 Query: 399 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824997 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 12824938 Query: 459 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824937 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 12824878 Query: 519 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 578 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 12824877 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaata 12824818 Query: 579 ctagatatgaccc 591 ||||||||||||| Sbjct: 12824817 ctagatatgaccc 12824805 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtgg 39 ||||||||| |||||| |||| ||||||||||||||||| Sbjct: 12825648 actagcttacgctctgccccgagtagcatggggcacgtgg 12825609
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 934 bits (471), Expect = 0.0 Identities = 565/592 (95%), Gaps = 11/592 (1%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 127502 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 127444 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127443 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 127385 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||| ||| ||||||||||||| |||||||||| ||||| Sbjct: 127384 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---agctc 127328 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 127327 ccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcg 127268 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 127267 actcataggcagtggcttggttaagggaat-----ccaccgtagccgtagcgaaagcgag 127213 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127212 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 127153 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 127152 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 127093 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127092 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 127033 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127032 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 126973 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 || ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126972 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 126921 Score = 934 bits (471), Expect = 0.0 Identities = 565/592 (95%), Gaps = 11/592 (1%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 107420 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 107478 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107479 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 107537 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||| ||| ||||||||||||| |||||||||| ||||| Sbjct: 107538 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---agctc 107594 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 107595 ccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcg 107654 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 107655 actcataggcagtggcttggttaagggaat-----ccaccgtagccgtagcgaaagcgag 107709 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107710 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 107769 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107770 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 107829 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107830 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 107889 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107890 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 107949 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 || ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107950 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 108001
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 934 bits (471), Expect = 0.0 Identities = 565/592 (95%), Gaps = 11/592 (1%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 133861 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 133803 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133802 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 133744 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 133743 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 133687 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 133686 ccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcg 133627 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 133626 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 133572 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133571 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 133512 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 133511 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 133452 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133451 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 133392 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 133391 aatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgg 133332 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 || ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133331 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 133280 Score = 934 bits (471), Expect = 0.0 Identities = 565/592 (95%), Gaps = 11/592 (1%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 104110 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 104168 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104169 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 104227 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 104228 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 104284 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104285 ccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcg 104344 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 104345 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 104399 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104400 tcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 104459 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104460 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 104519 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104520 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 104579 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 104580 aatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgg 104639 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 || ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104640 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 104691
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 918 bits (463), Expect = 0.0 Identities = 560/588 (95%), Gaps = 11/588 (1%) Strand = Plus / Minus Query: 5 gcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaaggn 63 ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 139220 gcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagcaagg- 139163 Query: 64 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139162 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 139103 Query: 124 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 183 |||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||| Sbjct: 139102 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaa 139046 Query: 184 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 243 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139045 gcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 138986 Query: 244 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 303 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 138985 ataggcagtggcttggttaagggaac-----ccaccggagccatagcgaaagcgagtctt 138931 Query: 304 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 363 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138930 catagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 138871 Query: 364 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 423 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 138870 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatg 138811 Query: 424 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138810 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 138751 Query: 484 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 138750 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 138691 Query: 544 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138690 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 138643 Score = 918 bits (463), Expect = 0.0 Identities = 560/588 (95%), Gaps = 11/588 (1%) Strand = Plus / Plus Query: 5 gcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaaggn 63 ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 110725 gcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagcaagg- 110782 Query: 64 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110783 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 110842 Query: 124 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 183 |||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||| Sbjct: 110843 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaa 110899 Query: 184 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 243 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110900 gcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 110959 Query: 244 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 303 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 110960 ataggcagtggcttggttaagggaac-----ccaccggagccatagcgaaagcgagtctt 111014 Query: 304 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 363 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111015 catagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 111074 Query: 364 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 423 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 111075 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatg 111134 Query: 424 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111135 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 111194 Query: 484 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 111195 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 111254 Query: 544 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111255 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 111302
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 918 bits (463), Expect = 0.0 Identities = 560/588 (95%), Gaps = 11/588 (1%) Strand = Plus / Minus Query: 5 gcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaaggn 63 ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 141742 gcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagcaagg- 141685 Query: 64 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 123 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141684 accaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 141625 Query: 124 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 183 |||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||| Sbjct: 141624 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaa 141568 Query: 184 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 243 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141567 gcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 141508 Query: 244 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 303 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 141507 ataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtctt 141453 Query: 304 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 363 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141452 catagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 141393 Query: 364 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 423 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 141392 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatg 141333 Query: 424 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141332 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 141273 Query: 484 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 141272 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 141213 Query: 544 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141212 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 141165 Score = 918 bits (463), Expect = 0.0 Identities = 560/588 (95%), Gaps = 11/588 (1%) Strand = Plus / Plus Query: 5 gcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaaggn 63 ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 111915 gcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagcaagg- 111972 Query: 64 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 123 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111973 accaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 112032 Query: 124 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 183 |||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||| Sbjct: 112033 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaa 112089 Query: 184 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 243 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112090 gcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 112149 Query: 244 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 303 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112150 ataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtctt 112204 Query: 304 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 363 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112205 catagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 112264 Query: 364 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 423 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 112265 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatg 112324 Query: 424 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112325 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 112384 Query: 484 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 112385 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 112444 Query: 544 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112445 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 112492
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 894 bits (451), Expect = 0.0 Identities = 560/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 135937 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 135879 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135878 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 135820 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 135819 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 135763 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 135762 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 135705 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 135704 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 135650 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135649 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 135590 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135589 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 135530 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135529 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 135470 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135469 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 135410 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135409 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 135359 Score = 894 bits (451), Expect = 0.0 Identities = 560/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 106693 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 106751 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106752 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 106810 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 106811 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 106867 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 106868 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 106925 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 106926 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 106980 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106981 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 107040 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107041 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 107100 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107101 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 107160 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107161 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 107220 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107221 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 107271
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 894 bits (451), Expect = 0.0 Identities = 540/566 (95%), Gaps = 14/566 (2%) Strand = Plus / Minus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134596 tagcatggggcacgtgg-aatcccgtgtgaatcagcaagg-accaccttgcaaggctaaa 134539 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134538 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccat 134479 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| |||||||||| |||||||||||||||||||| |||| Sbjct: 134478 cggggagtgaaatagaacatgaaaccgtg---agctcccaagcagtgggaggagaaa--- 134425 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134424 -tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 134366 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 134365 agggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 134311 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134310 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 134251 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134250 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134191 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134190 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 134131 Query: 503 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 562 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 134130 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 134071 Query: 563 aggcaaactctgaatactagatatga 588 |||||||||||||||||||||||||| Sbjct: 134070 aggcaaactctgaatactagatatga 134045 Score = 894 bits (451), Expect = 0.0 Identities = 540/566 (95%), Gaps = 14/566 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 105686 tagcatggggcacgtgg-aatcccgtgtgaatcagcaagg-accaccttgcaaggctaaa 105743 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105744 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccat 105803 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| |||||||||| |||||||||||||||||||| |||| Sbjct: 105804 cggggagtgaaatagaacatgaaaccgtg---agctcccaagcagtgggaggagaaa--- 105857 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105858 -tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 105916 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 105917 agggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 105971 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105972 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 106031 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106032 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 106091 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106092 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 106151 Query: 503 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 562 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 106152 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 106211 Query: 563 aggcaaactctgaatactagatatga 588 |||||||||||||||||||||||||| Sbjct: 106212 aggcaaactctgaatactagatatga 106237
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 894 bits (451), Expect = 0.0 Identities = 560/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 1887 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 1945 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1946 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 2004 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 2005 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 2061 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 2062 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 2119 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2120 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 2174 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2175 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 2234 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2235 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 2294 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2295 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 2354 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2355 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 2414 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2415 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 2465
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 894 bits (451), Expect = 0.0 Identities = 560/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 135935 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 135877 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135876 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 135818 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 135817 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 135761 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 135760 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 135703 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 135702 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 135648 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135647 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 135588 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135587 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 135528 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135527 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 135468 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135467 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 135408 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135407 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 135357 Score = 894 bits (451), Expect = 0.0 Identities = 560/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 106691 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 106749 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106750 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 106808 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 106809 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 106865 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 106866 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 106923 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 106924 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 106978 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106979 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 107038 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107039 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 107098 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107099 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 107158 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107159 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 107218 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107219 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 107269
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 894 bits (451), Expect = 0.0 Identities = 560/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 135666 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 135608 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135607 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 135549 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 135548 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 135492 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 135491 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 135434 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 135433 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 135379 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135378 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 135319 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135318 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 135259 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135258 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 135199 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135198 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 135139 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135138 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 135088 Score = 894 bits (451), Expect = 0.0 Identities = 560/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 106472 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 106530 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106531 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 106589 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 106590 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 106646 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 106647 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 106704 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 106705 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 106759 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106760 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 106819 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106820 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 106879 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106880 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 106939 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106940 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 106999 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107000 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 107050
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 886 bits (447), Expect = 0.0 Identities = 559/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 136575 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 136517 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136516 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 136458 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 136457 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 136401 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 136400 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 136343 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 136342 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 136288 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136287 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 136228 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 136227 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 136168 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136167 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 136108 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136107 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 136048 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136047 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 135997 Score = 886 bits (447), Expect = 0.0 Identities = 559/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 106982 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 107040 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107041 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 107099 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 107100 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 107156 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 107157 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 107214 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 107215 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 107269 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107270 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 107329 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107330 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 107389 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107390 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 107449 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107450 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 107509 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107510 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 107560
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 886 bits (447), Expect = 0.0 Identities = 559/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 135183 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 135125 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135124 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 135066 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 135065 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 135009 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 135008 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 134951 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 134950 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 134896 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134895 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 134836 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 134835 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 134776 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134775 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 134716 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134715 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 134656 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134655 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 134605 Score = 886 bits (447), Expect = 0.0 Identities = 559/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 105853 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 105911 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105912 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 105970 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 105971 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 106027 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 106028 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 106085 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 106086 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 106140 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106141 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 106200 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106201 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 106260 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106261 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 106320 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106321 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 106380 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106381 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 106431
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 886 bits (447), Expect = 0.0 Identities = 559/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 136229 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 136171 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136170 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 136112 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 136111 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 136055 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 136054 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 135997 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 135996 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 135942 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135941 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 135882 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135881 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 135822 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135821 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 135762 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135761 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 135702 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135701 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 135651 Score = 886 bits (447), Expect = 0.0 Identities = 559/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 106196 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 106254 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106255 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 106313 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 106314 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 106370 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 106371 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 106428 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 106429 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 106483 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106484 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 106543 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106544 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 106603 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106604 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 106663 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106664 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 106723 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106724 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 106774
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 886 bits (447), Expect = 0.0 Identities = 559/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 135318 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 135260 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135259 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 135201 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 135200 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 135144 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 135143 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 135086 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 135085 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 135031 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135030 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 134971 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 134970 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 134911 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134910 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 134851 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134850 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 134791 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134790 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 134740 Score = 886 bits (447), Expect = 0.0 Identities = 559/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 106025 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 106083 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106084 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 106142 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 106143 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 106199 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 106200 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 106257 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 106258 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 106312 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106313 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 106372 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106373 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 106432 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106433 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 106492 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106493 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 106552 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106553 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 106603
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 886 bits (447), Expect = 0.0 Identities = 559/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 135316 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 135258 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135257 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 135199 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 135198 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 135142 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 135141 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 135084 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 135083 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 135029 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135028 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 134969 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 134968 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 134909 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134908 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 134849 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134848 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 134789 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134788 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 134738 Score = 886 bits (447), Expect = 0.0 Identities = 559/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 106022 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 106080 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106081 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 106139 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 106140 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 106196 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 106197 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 106254 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 106255 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 106309 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106310 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 106369 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106370 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 106429 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106430 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 106489 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106490 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 106549 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106550 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 106600
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 886 bits (447), Expect = 0.0 Identities = 559/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 135228 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 135170 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135169 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 135111 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 135110 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 135054 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 135053 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 134996 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 134995 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 134941 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134940 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 134881 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 134880 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 134821 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134820 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 134761 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134760 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 134701 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134700 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 134650 Score = 886 bits (447), Expect = 0.0 Identities = 559/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 105900 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 105958 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105959 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 106017 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 106018 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 106074 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 106075 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 106132 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 106133 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 106187 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106188 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 106247 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106248 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 106307 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106308 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 106367 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106368 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 106427 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106428 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 106478
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 884 bits (446), Expect = 0.0 Identities = 559/591 (94%), Gaps = 12/591 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 132413 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 132355 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132354 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 132296 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 132295 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 132239 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 132238 ccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcg 132180 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 132179 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 132125 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132124 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 132065 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 132064 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 132005 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132004 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 131945 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131944 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 131885 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131884 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 131834 Score = 884 bits (446), Expect = 0.0 Identities = 559/591 (94%), Gaps = 12/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 104465 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 104523 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104524 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 104582 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 104583 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 104639 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 104640 ccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcg 104698 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 104699 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 104753 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104754 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 104813 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104814 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 104873 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104874 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 104933 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104934 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 104993 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104994 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 105044
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 884 bits (446), Expect = 0.0 Identities = 559/591 (94%), Gaps = 12/591 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 131429 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 131371 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131370 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 131312 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 131311 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 131255 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||| | || | ||||||||||||||||||||||||||||||||| Sbjct: 131254 tcaagcagtgggagggggaccagacc-ctgaccgcgtgcctgttgaagaatgagccggcg 131196 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 131195 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 131141 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131140 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 131081 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 131080 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 131021 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131020 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 130961 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130960 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 130901 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130900 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 130850 Score = 884 bits (446), Expect = 0.0 Identities = 559/591 (94%), Gaps = 12/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 102016 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 102074 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102075 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 102133 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 102134 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 102190 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||| | || | ||||||||||||||||||||||||||||||||| Sbjct: 102191 tcaagcagtgggagggggaccagacc-ctgaccgcgtgcctgttgaagaatgagccggcg 102249 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 102250 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 102304 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102305 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 102364 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 102365 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 102424 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102425 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 102484 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102485 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 102544 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102545 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 102595
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 884 bits (446), Expect = 0.0 Identities = 559/591 (94%), Gaps = 12/591 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 132406 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 132348 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132347 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 132289 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 132288 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 132232 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 132231 ccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcg 132173 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 132172 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 132118 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132117 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 132058 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 132057 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 131998 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131997 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 131938 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131937 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 131878 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131877 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 131827 Score = 884 bits (446), Expect = 0.0 Identities = 559/591 (94%), Gaps = 12/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 104463 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 104521 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104522 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 104580 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 104581 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 104637 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 104638 ccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcg 104696 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 104697 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 104751 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104752 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 104811 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104812 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 104871 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104872 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 104931 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104932 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 104991 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104992 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 105042
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 878 bits (443), Expect = 0.0 Identities = 558/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 142516 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 142458 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142457 agg-accaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 142399 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| |||| Sbjct: 142398 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtag---gctc 142342 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 142341 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 142284 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 142283 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 142229 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142228 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 142169 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 142168 ggatgaagcttggatgaaactaagcggaggtccgaaccgactgatgttgaagaatcagcg 142109 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 142108 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctcgttctccccga 142049 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142048 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 141989 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141988 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 141938 Score = 878 bits (443), Expect = 0.0 Identities = 558/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 110812 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 110870 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110871 agg-accaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 110929 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| |||| Sbjct: 110930 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtag---gctc 110986 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 110987 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 111044 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 111045 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 111099 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111100 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 111159 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 111160 ggatgaagcttggatgaaactaagcggaggtccgaaccgactgatgttgaagaatcagcg 111219 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 111220 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctcgttctccccga 111279 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111280 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 111339 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111340 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 111390
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 876 bits (442), Expect = 0.0 Identities = 558/591 (94%), Gaps = 12/591 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 131305 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 131247 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131246 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 131188 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 131187 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 131131 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 131130 ccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcg 131072 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 131071 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 131017 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131016 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 130957 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 130956 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 130897 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130896 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 130837 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130836 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 130777 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130776 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 130726 Score = 876 bits (442), Expect = 0.0 Identities = 558/591 (94%), Gaps = 12/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 103330 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 103388 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103389 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 103447 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 103448 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 103504 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 103505 ccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcg 103563 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 103564 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 103618 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103619 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 103678 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 103679 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 103738 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103739 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 103798 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103799 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 103858 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103859 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 103909
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 870 bits (439), Expect = 0.0 Identities = 557/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 135195 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 135137 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135136 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 135078 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 135077 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 135021 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 135020 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 134963 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 134962 actaataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 134908 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134907 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 134848 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 134847 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 134788 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134787 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 134728 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134727 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 134668 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 134667 gccgcgagagcggtaccaaatcgaggcaaactctgaataatagatatgacc 134617 Score = 870 bits (439), Expect = 0.0 Identities = 557/591 (94%), Gaps = 13/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 105867 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 105925 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105926 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 105984 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 105985 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 106041 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 106042 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 106099 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 106100 actaataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 106154 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106155 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 106214 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106215 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 106274 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106275 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 106334 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106335 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 106394 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106395 gccgcgagagcggtaccaaatcgaggcaaactctgaataatagatatgacc 106445
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 868 bits (438), Expect = 0.0 Identities = 557/591 (94%), Gaps = 12/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 361 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 419 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 478 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 479 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 535 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || ||||||||||||||||||||||||||||||||||| Sbjct: 536 ccaagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagccggcg 594 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 595 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 649 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 650 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatgacca 709 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 710 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcg 769 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 829 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 830 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 889 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 890 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 940
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 868 bits (438), Expect = 0.0 Identities = 557/591 (94%), Gaps = 12/591 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 132636 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 132578 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132577 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 132519 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 132518 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 132462 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || ||||||||||||||||||||||||||||||||||| Sbjct: 132461 ccaagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagccggcg 132403 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 132402 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 132348 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 132347 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatgacca 132288 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 132287 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcg 132228 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132227 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 132168 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132167 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 132108 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132107 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 132057 Score = 868 bits (438), Expect = 0.0 Identities = 557/591 (94%), Gaps = 12/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 104128 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 104186 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104187 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 104245 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 104246 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 104302 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || ||||||||||||||||||||||||||||||||||| Sbjct: 104303 ccaagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagccggcg 104361 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 104362 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 104416 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 104417 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatgacca 104476 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 104477 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcg 104536 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104537 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 104596 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104597 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 104656 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104657 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 104707
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 868 bits (438), Expect = 0.0 Identities = 557/591 (94%), Gaps = 12/591 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 133597 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 133539 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133538 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 133480 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 133479 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 133423 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || ||||||||||||||||||||||||||||||||||| Sbjct: 133422 ccaagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagccggcg 133364 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 133363 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 133309 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 133308 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatgacca 133249 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 133248 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcg 133189 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133188 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 133129 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133128 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 133069 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133068 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 133018 Score = 868 bits (438), Expect = 0.0 Identities = 557/591 (94%), Gaps = 12/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 105052 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 105110 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105111 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 105169 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 105170 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 105226 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || ||||||||||||||||||||||||||||||||||| Sbjct: 105227 ccaagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagccggcg 105285 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 105286 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 105340 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 105341 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatgacca 105400 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 105401 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcg 105460 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105461 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 105520 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105521 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 105580 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105581 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 105631
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 868 bits (438), Expect = 0.0 Identities = 557/591 (94%), Gaps = 12/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 363 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 421 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 422 agg-accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgag 480 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 481 ggaagggtgaaaagaacccccaccggggagtgaaatagaacatgaaaccgta---agctc 537 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 538 ccaagcagtgggaggagcctgggg-ctctgaccgcgtgcctgttgaagaatgagccggcg 596 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 597 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 651 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 652 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 711 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 712 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 771 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 831 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 832 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 891 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 892 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 942
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 866 bits (437), Expect = 0.0 Identities = 558/593 (94%), Gaps = 13/593 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 139350 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 139292 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 139291 agg-accaccttgcaaggctaaatactcctgggtgacccatagcgaagtagtaccgtgag 139233 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 139232 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 139176 Query: 180 ccaagcagtgggagggga--aagtgatctctgaccgcgtgcctgttgaagaatgagccgg 237 ||||||||||||||| || | | ||||||||||||||||||||||||||||||||| Sbjct: 139175 ccaagcagtgggaggagactactaggactctgaccgcgtgcctgttgaagaatgagccgg 139116 Query: 238 cgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcg 297 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 139115 cgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcg 139061 Query: 298 agtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgac 357 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139060 agtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgac 139001 Query: 358 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 417 ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 139000 caggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcag 138941 Query: 418 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138940 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 138881 Query: 478 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138880 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 138821 Query: 538 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 |||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138820 gggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 138768 Score = 866 bits (437), Expect = 0.0 Identities = 558/593 (94%), Gaps = 13/593 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 109949 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 110007 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 110008 agg-accaccttgcaaggctaaatactcctgggtgacccatagcgaagtagtaccgtgag 110066 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 110067 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 110123 Query: 180 ccaagcagtgggagggga--aagtgatctctgaccgcgtgcctgttgaagaatgagccgg 237 ||||||||||||||| || | | ||||||||||||||||||||||||||||||||| Sbjct: 110124 ccaagcagtgggaggagactactaggactctgaccgcgtgcctgttgaagaatgagccgg 110183 Query: 238 cgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcg 297 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 110184 cgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcg 110238 Query: 298 agtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgac 357 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110239 agtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgac 110298 Query: 358 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 417 ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 110299 caggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcag 110358 Query: 418 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110359 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 110418 Query: 478 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110419 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 110478 Query: 538 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 |||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110479 gggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 110531
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 864 bits (436), Expect = 0.0 Identities = 558/592 (94%), Gaps = 14/592 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 139142 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 139084 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139083 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 139025 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| |||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 139024 ggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccgta---agctc 138968 Query: 180 ccaagcagtgggaggggaa-agtgatctctgaccgcgtgcctgttgaagaatgagccggc 238 ||||||||||||||| | || | |||||||||||||||||||||||||||||||||| Sbjct: 138967 ccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatgagccggc 138910 Query: 239 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 298 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 138909 gactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 138855 Query: 299 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 358 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138854 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 138795 Query: 359 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 418 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 138794 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 138735 Query: 419 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138734 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 138675 Query: 479 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138674 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 138615 Query: 539 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138614 ggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 138563 Score = 864 bits (436), Expect = 0.0 Identities = 558/592 (94%), Gaps = 14/592 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 109955 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 110013 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110014 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 110072 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| |||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 110073 ggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccgta---agctc 110129 Query: 180 ccaagcagtgggaggggaa-agtgatctctgaccgcgtgcctgttgaagaatgagccggc 238 ||||||||||||||| | || | |||||||||||||||||||||||||||||||||| Sbjct: 110130 ccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatgagccggc 110187 Query: 239 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 298 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 110188 gactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 110242 Query: 299 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 358 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110243 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 110302 Query: 359 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 418 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 110303 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 110362 Query: 419 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110363 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 110422 Query: 479 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110423 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 110482 Query: 539 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110483 ggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 110534
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 864 bits (436), Expect = 0.0 Identities = 559/592 (94%), Gaps = 15/592 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 2131 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 2189 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2190 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 2248 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 2249 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 2305 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 2306 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 2363 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2364 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 2418 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2419 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 2478 Query: 360 ggatgaagcttggatgaaactaagcagagg-tccgaaccgactgatgttgaagaatcagc 418 ||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 2479 ggatgaagcttgggtgaaactaagtggagggtccgaaccgactgatgttgaagaatcagc 2538 Query: 419 ggatgagttgtggttaggggtgaaatg-ccactcgaacccagagctagctggttctcccc 477 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2539 ggatgagttgtggttaggggtgaaatggccactcgaacccagagctagctggttctcccc 2598 Query: 478 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2599 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 2658 Query: 538 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac 589 |||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2659 gggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgac 2710
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 860 bits (434), Expect = 0.0 Identities = 556/591 (94%), Gaps = 12/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 370 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 428 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 487 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 488 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 544 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 545 ccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcg 603 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 604 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 658 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 tcttcgtagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 718 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 719 ggatggagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 778 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 779 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 838 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 839 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 898 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 899 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 949
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 856 bits (432), Expect = 0.0 Identities = 554/589 (94%), Gaps = 12/589 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 106367 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 106425 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 106426 agg-accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgag 106484 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| |||| Sbjct: 106485 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctt 106541 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 106542 ccaagcagtgggaggagacgagga-ctctgaccgcgtgcctgttgaagaatgagccggcg 106600 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 106601 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 106655 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106656 tcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 106715 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106716 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 106775 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106776 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 106835 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106836 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 106895 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 588 || ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106896 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatga 106944 Score = 835 bits (421), Expect = 0.0 Identities = 532/566 (93%), Gaps = 10/566 (1%) Strand = Plus / Minus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||| | | ||||||||||||||||||| Sbjct: 135517 tagcatggggcacgtgg-aatcccgtgtgaatcagccaaggaccaccttgcaaggctaaa 135459 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 135458 tactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccat 135399 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||||||| |||| ||||||||||||||| || | Sbjct: 135398 cggggagtgaaatagaacatgaaaccgta---agcttccaagcagtgggaggagacgagg 135342 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135341 a-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 135283 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 ||||||| ||||||||||||||||||||||||||||| || |||| |||||||||| Sbjct: 135282 agggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactg 135228 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135227 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 135168 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135167 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 135108 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135107 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 135048 Query: 503 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 562 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 135047 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 134988 Query: 563 aggcaaactctgaatactagatatga 588 |||||||||||||||||||||||||| Sbjct: 134987 aggcaaactctgaatactagatatga 134962
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 856 bits (432), Expect = 0.0 Identities = 551/585 (94%), Gaps = 12/585 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 139998 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 139940 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139939 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 139881 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| || || Sbjct: 139880 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agttc 139824 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| || | | ||||||||||||||||||||||||||||||||||| Sbjct: 139823 ccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgagccggcg 139765 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 139764 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 139710 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139709 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 139650 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 139649 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 139590 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139589 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 139530 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139529 aatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgg 139470 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 584 || ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 139469 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 139425 Score = 856 bits (432), Expect = 0.0 Identities = 551/585 (94%), Gaps = 12/585 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 110062 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 110120 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110121 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 110179 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| || || Sbjct: 110180 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agttc 110236 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| || | | ||||||||||||||||||||||||||||||||||| Sbjct: 110237 ccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgagccggcg 110295 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 110296 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 110350 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110351 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 110410 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 110411 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 110470 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110471 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 110530 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110531 aatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgg 110590 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 584 || ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110591 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 110635
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 856 bits (432), Expect = 0.0 Identities = 554/589 (94%), Gaps = 12/589 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 135818 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 135760 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 135759 agg-accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgag 135701 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| |||| Sbjct: 135700 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctt 135644 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 135643 ccaagcagtgggaggagacgagga-ctctgaccgcgtgcctgttgaagaatgagccggcg 135585 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 135584 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 135530 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135529 tcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 135470 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135469 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 135410 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135409 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 135350 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135349 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 135290 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 588 || ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135289 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatga 135241 Score = 856 bits (432), Expect = 0.0 Identities = 554/589 (94%), Gaps = 12/589 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 106589 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 106647 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 106648 agg-accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgag 106706 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| |||| Sbjct: 106707 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctt 106763 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 106764 ccaagcagtgggaggagacgagga-ctctgaccgcgtgcctgttgaagaatgagccggcg 106822 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 106823 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 106877 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106878 tcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 106937 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106938 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 106997 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106998 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 107057 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107058 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 107117 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 588 || ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107118 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatga 107166
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 850 bits (429), Expect = 0.0 Identities = 555/591 (93%), Gaps = 16/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| || Sbjct: 463 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcgaca 521 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 580 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||| | ||| ||||||||||||| ||||||||| ||||| Sbjct: 581 ggaagggtgaaaagaacccc-atcggggagtgaaatagaacatgaaaccgta---agctc 636 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | | ||||||||||||||||||||||||||||||||||| Sbjct: 637 ccaagcagtgggaggccaggg----ctctgaccgcgtgcctgttgaagaatgagccggcg 692 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 693 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 747 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 807 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 808 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 867 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 927 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 987 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 988 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 1038
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 846 bits (427), Expect = 0.0 Identities = 556/592 (93%), Gaps = 13/592 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 131506 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 131448 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 131447 agg-accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgag 131389 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 131388 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 131332 Query: 180 ccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 238 ||||||||||||||| || | || |||||||||||||||||||||||||||||||||| Sbjct: 131331 ccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggc 131273 Query: 239 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 298 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 131272 gactcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaaagcga 131218 Query: 299 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 358 ||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131217 gtcttcacagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 131158 Query: 359 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 418 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 131157 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 131098 Query: 419 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131097 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 131038 Query: 479 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 538 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131037 aaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcg 130978 Query: 539 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130977 ggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 130926 Score = 846 bits (427), Expect = 0.0 Identities = 556/592 (93%), Gaps = 13/592 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 103888 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 103946 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 103947 agg-accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgag 104005 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 104006 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 104062 Query: 180 ccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 238 ||||||||||||||| || | || |||||||||||||||||||||||||||||||||| Sbjct: 104063 ccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggc 104121 Query: 239 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 298 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 104122 gactcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaaagcga 104176 Query: 299 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 358 ||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104177 gtcttcacagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 104236 Query: 359 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 418 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 104237 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 104296 Query: 419 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104297 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 104356 Query: 479 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 538 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 104357 aaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcg 104416 Query: 539 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104417 ggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 104468
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 842 bits (425), Expect = 0.0 Identities = 555/592 (93%), Gaps = 15/592 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 858 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 916 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc-gtga 118 ||| |||||||||||||||||||||||||||||||||||||||| || ||||||| |||| Sbjct: 917 agg-accaccttgcaaggctaaatactcctgggtgaccgatagccaaatagtacccgtga 975 Query: 119 gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagct 178 ||||||||||||||||||||||| ||| ||||||||||||| ||||||||| |||| Sbjct: 976 gggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agct 1032 Query: 179 cccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 238 | |||||||||||||| || || |||||||||||||||||||||||||||||||||| Sbjct: 1033 ctcaagcagtgggaggagacagg---ctctgaccgcgtgcctgttgaagaatgagccggc 1089 Query: 239 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 298 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1090 gactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 1144 Query: 299 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 358 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1145 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 1204 Query: 359 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 418 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1205 aggatgaagcttgggtgaaactaagtgagggtccgaaccgactgatgttgaagaatcagc 1264 Query: 419 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1265 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 1324 Query: 479 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1325 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 1384 Query: 539 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1385 ggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 1436
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 841 bits (424), Expect = 0.0 Identities = 553/591 (93%), Gaps = 14/591 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 370 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 428 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 429 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgag 487 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||| ||| ||||||||| ||||| Sbjct: 488 ggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccgta---agctc 544 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||| || || |||||| ||||||||||||||| |||||||||||| Sbjct: 545 tcaagcagtgggaggagacagg---ctctgaacgcgtgcctgttgaaaaatgagccggcg 601 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 602 actcatacgcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 656 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 657 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 716 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 717 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 776 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 777 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 836 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 837 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 896 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 897 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 947
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 835 bits (421), Expect = 0.0 Identities = 552/590 (93%), Gaps = 12/590 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||| ||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 363 actagtttatgctctaacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 421 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 agg-accaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 480 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 481 ggaaaggtgaaaagaacccccataggggagtgaaatagaacatgaaaccgta---agctc 537 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 538 ccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcg 597 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||| ||||| |||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 598 acttataggtagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcgag 652 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 653 tcttcctagggcaattgtcactacttatggacccgaacctgggtgatctatccatgacca 712 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 713 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcg 772 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 832 Query: 480 aatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcg 538 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 833 aatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcg 892 Query: 539 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 588 ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 ggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatga 942
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 831 bits (419), Expect = 0.0 Identities = 547/584 (93%), Gaps = 12/584 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 115848 actagcttaggctctaacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 115790 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115789 agg-accaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 115731 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 115730 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 115674 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 115673 ccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagccggcg 115614 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||| |||||||||||| ||||||||||| | ||||||||||||||||||||||||| Sbjct: 115613 acttataggcagtggcctggttaagggagc-----ccaccggagccgtagcgaaagcgag 115559 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115558 tcttcttagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 115499 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 115498 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcg 115439 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115438 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 115379 Query: 480 aatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcg 538 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 115378 aatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcg 115319 Query: 539 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 582 ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 115318 ggctgcgagagcggtaccaaatcgaggcaaactctgaatactag 115275 Score = 831 bits (419), Expect = 0.0 Identities = 547/584 (93%), Gaps = 12/584 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 86272 actagcttaggctctaacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 86330 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86331 agg-accaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 86389 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 86390 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 86446 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 86447 ccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagccggcg 86506 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||| |||||||||||| ||||||||||| | ||||||||||||||||||||||||| Sbjct: 86507 acttataggcagtggcctggttaagggagc-----ccaccggagccgtagcgaaagcgag 86561 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86562 tcttcttagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 86621 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 86622 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcg 86681 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86682 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 86741 Query: 480 aatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcg 538 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 86742 aatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcg 86801 Query: 539 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 582 ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 86802 ggctgcgagagcggtaccaaatcgaggcaaactctgaatactag 86845
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 827 bits (417), Expect = 0.0 Identities = 530/563 (94%), Gaps = 11/563 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 86649 tagcatggggcacgtgg-aatcccgtgtgaatcagcaagg-accaccttgcaaggctaaa 86706 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86707 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccat 86766 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||||||| |||||||||||||||||||| || | Sbjct: 86767 cggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggaaaattag 86823 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 86824 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtta 86883 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 ||||||| |||||||||||||||||| |||||||||| || |||| |||||||||| Sbjct: 86884 agggaac-----ccaccggagccgtagcgagagcgagtcttcatggggcaattgtcactg 86938 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 86939 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 86998 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86999 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 87058 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87059 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 87118 Query: 503 actgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 |||||| ||||||||||||||||||||||||||| ||||| ||| ||||||||||||||| Sbjct: 87119 actggaccatctaggggtaaagcactgtttcggtacgggccgcgagagcggtaccaaatc 87178 Query: 562 gaggcaaactctgaatactagat 584 ||||||||||||||||||||||| Sbjct: 87179 gaggcaaactctgaatactagat 87201
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 827 bits (417), Expect = 0.0 Identities = 551/590 (93%), Gaps = 12/590 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 363 actagcttacgctctaacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 421 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 480 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 481 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 537 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 538 ccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcg 597 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||| ||||| |||||| |||||||||| || ||||||||||||||||||||||||| Sbjct: 598 acttataggtagtggcctggttaaggggac-----ccaccggagccgtagcgaaagcgag 652 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 653 tcttcctggggcaattgtcactacttatggacccgaacctgggtgatctatccatgacca 712 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||||| || |||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 713 ggatgaagctcgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcg 772 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 832 Query: 480 aatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcg 538 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 833 aatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcg 892 Query: 539 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 588 ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 ggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatga 942
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 827 bits (417), Expect = 0.0 Identities = 545/582 (93%), Gaps = 12/582 (2%) Strand = Plus / Plus Query: 6 cttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaaggna 64 |||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| | Sbjct: 372 cttatgctctaacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagcaagg-a 429 Query: 65 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 430 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 489 Query: 125 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 184 ||||||||||||||||| ||| ||||||||||||| ||||||||| |||||||||| Sbjct: 490 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctcccaag 546 Query: 185 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 244 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 547 cagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 606 Query: 245 taggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 304 ||||||||||| ||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 607 taggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcaagtcttc 661 Query: 305 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 364 | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 ctggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatg 721 Query: 365 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 424 |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 722 aagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatga 781 Query: 425 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 841 Query: 485 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 543 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 842 gttgaggcgcagcagttgactagactatctaggggtaaagcactgtttcggtgcgggctg 901 Query: 544 cgcgagcggtaccaaatcgaggcaaactctgaatactagata 585 || |||||||||||||||||||||||||||||||||| |||| Sbjct: 902 cgagagcggtaccaaatcgaggcaaactctgaatactggata 943
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 823 bits (415), Expect = 0.0 Identities = 548/587 (93%), Gaps = 13/587 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 4593 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 4651 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4652 agg-accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgag 4710 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 4711 ggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaaaccgta---agctc 4767 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 4768 ccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 4825 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4826 actcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaaagcgag 4880 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4881 tcttcatagggctattgtcactgcttatggacccgaacctgggtgatctatccatgacca 4940 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||| | |||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 4941 ggatgaagcttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcg 5000 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5001 gatgagttgtggttagcggtgaaatgccactcgaacccagagctagctggttctccccga 5060 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5061 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgg 5120 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatat 586 || ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 5121 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatat 5167
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 823 bits (415), Expect = 0.0 Identities = 548/587 (93%), Gaps = 13/587 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 23332 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 23274 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 23273 agg-accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgag 23215 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 23214 ggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaaaccgta---agctc 23158 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 23157 ccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 23100 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 23099 actcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaaagcgag 23045 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23044 tcttcatagggctattgtcactgcttatggacccgaacctgggtgatctatccatgacca 22985 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||| | |||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 22984 ggatgaagcttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcg 22925 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22924 gatgagttgtggttagcggtgaaatgccactcgaacccagagctagctggttctccccga 22865 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 22864 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgg 22805 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatat 586 || ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 22804 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatat 22758
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 819 bits (413), Expect = 0.0 Identities = 529/563 (93%), Gaps = 11/563 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 88735 tagcatggggcacgtgg-aatcccgtgtgaatcagcaagg-accaccttgcaaggctaaa 88792 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88793 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccat 88852 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||||||| |||||||||||||||||||| || | Sbjct: 88853 cggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggaaaattag 88909 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 88910 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtta 88969 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 ||||||| |||||||||||||||||| |||||||||| || |||| |||||||||| Sbjct: 88970 agggaac-----ccaccggagccgtagcgagagcgagtcttcatggggcaattgtcactg 89024 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 89025 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 89084 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 89085 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 89144 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89145 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 89204 Query: 503 actgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 |||||| ||||||||||||||||||||||||||| ||||| || ||||||||||||||| Sbjct: 89205 actggaccatctaggggtaaagcactgtttcggtacgggccacgagagcggtaccaaatc 89264 Query: 562 gaggcaaactctgaatactagat 584 ||||||||||||||||||||||| Sbjct: 89265 gaggcaaactctgaatactagat 89287
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 811 bits (409), Expect = 0.0 Identities = 531/567 (93%), Gaps = 11/567 (1%) Strand = Plus / Minus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 117763 tagcatggggcacgtgg-aatcccgtgtgaatcagcaagg-accaccttgtaaggctaaa 117706 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 117705 tactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccat 117646 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||||||| |||||||||||||||||||| ||| Sbjct: 117645 cggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagaatcga 117589 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 117588 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 117529 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 117528 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 117474 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 117473 cttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaa 117414 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 117413 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 117354 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117353 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 117294 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 117293 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 117234 Query: 562 gaggcaaactctgaatactagatatga 588 ||||||||||||||||||||||||||| Sbjct: 117233 gaggcaaactctgaatactagatatga 117207 Score = 811 bits (409), Expect = 0.0 Identities = 531/567 (93%), Gaps = 11/567 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 90339 tagcatggggcacgtgg-aatcccgtgtgaatcagcaagg-accaccttgtaaggctaaa 90396 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 90397 tactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccat 90456 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||||||| |||||||||||||||||||| ||| Sbjct: 90457 cggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagaatcga 90513 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 90514 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 90573 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 90574 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 90628 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 90629 cttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaa 90688 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 90689 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 90748 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90749 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 90808 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 90809 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 90868 Query: 562 gaggcaaactctgaatactagatatga 588 ||||||||||||||||||||||||||| Sbjct: 90869 gaggcaaactctgaatactagatatga 90895
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 809 bits (408), Expect = 0.0 Identities = 469/488 (96%), Gaps = 14/488 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 75338 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 75280 Query: 60 aggna----ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 115 ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75279 aggaaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 75220 Query: 116 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75219 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 75160 Query: 176 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 235 |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75159 gctccc--------ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 75108 Query: 236 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 295 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 75107 ggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaag 75048 Query: 296 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 355 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75047 cgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 74988 Query: 356 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74987 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 74928 Query: 416 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74927 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 74868 Query: 476 ccgaaatg 483 |||||||| Sbjct: 74867 ccgaaatg 74860 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 93 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 139 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 809 bits (408), Expect = 0.0 Identities = 469/488 (96%), Gaps = 14/488 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 382200 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 382258 Query: 60 aggna----ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 115 ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382259 aggaaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 382318 Query: 116 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382319 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 382378 Query: 176 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 235 |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382379 gctccc--------ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 382430 Query: 236 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 295 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 382431 ggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaag 382490 Query: 296 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 355 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382491 cgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 382550 Query: 356 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382551 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 382610 Query: 416 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382611 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 382670 Query: 476 ccgaaatg 483 |||||||| Sbjct: 382671 ccgaaatg 382678 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 93 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 139 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 93 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 139 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 809 bits (408), Expect = 0.0 Identities = 469/488 (96%), Gaps = 14/488 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 113429 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 113371 Query: 60 aggna----ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 115 ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113370 aggaaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 113311 Query: 116 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113310 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 113251 Query: 176 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 235 |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113250 gctccc--------ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 113199 Query: 236 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 295 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 113198 ggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaag 113139 Query: 296 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 355 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113138 cgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 113079 Query: 356 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113078 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 113019 Query: 416 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113018 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 112959 Query: 476 ccgaaatg 483 |||||||| Sbjct: 112958 ccgaaatg 112951 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 93 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 139 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 809 bits (408), Expect = 0.0 Identities = 472/492 (95%), Gaps = 14/492 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 368111 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 368053 Query: 60 aggna----ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 115 ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368052 aggaaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 367993 Query: 116 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367992 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 367933 Query: 176 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 235 |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367932 gctccc--------ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 367881 Query: 236 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 295 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 367880 ggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaag 367821 Query: 296 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 355 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367820 cgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 367761 Query: 356 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367760 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 367701 Query: 416 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367700 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 367641 Query: 476 ccgaaatgcgtt 487 ||||||| |||| Sbjct: 367640 ccgaaattcgtt 367629 Score = 809 bits (408), Expect = 0.0 Identities = 472/492 (95%), Gaps = 14/492 (2%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 184716 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 184658 Query: 60 aggna----ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 115 ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184657 aggaaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 184598 Query: 116 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184597 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 184538 Query: 176 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 235 |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184537 gctccc--------ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 184486 Query: 236 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 295 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 184485 ggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaag 184426 Query: 296 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 355 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184425 cgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 184366 Query: 356 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184365 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 184306 Query: 416 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184305 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 184246 Query: 476 ccgaaatgcgtt 487 ||||||| |||| Sbjct: 184245 ccgaaattcgtt 184234 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 93 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 139 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 809 bits (408), Expect = 0.0 Identities = 530/566 (93%), Gaps = 11/566 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4275 tagcatggggcacgtgg-aatcccgtgtgaatcagcaagg-accaccttgcaaggctaaa 4332 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4333 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccat 4392 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||| ||| |||| |||||||||| |||| ||| | Sbjct: 4393 cggggagtgaaatagaacatgaaatcgta---agcttccaagcagtgagaggagaatcgg 4449 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 4450 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 4509 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 |||||| |||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 4510 agggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactg 4564 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 4565 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 4624 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 4625 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 4684 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4685 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 4744 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 4745 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 4804 Query: 562 gaggcaaactctgaatactagatatg 587 ||||||||||||||||||||| |||| Sbjct: 4805 gaggcaaactctgaatactaggtatg 4830
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 809 bits (408), Expect = 0.0 Identities = 530/566 (93%), Gaps = 11/566 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 385 tagcatggggcacgtgg-aatcccgtgtgaatcagcaagg-accaccttgcaaggctaaa 442 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccat 502 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||| ||| |||| |||||||||| |||| ||| | Sbjct: 503 cggggagtgaaatagaacatgaaatcgta---agcttccaagcagtgagaggagaatcgg 559 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 560 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 619 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 |||||| |||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 620 agggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactg 674 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 675 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 734 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 735 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 794 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 854 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 855 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 914 Query: 562 gaggcaaactctgaatactagatatg 587 ||||||||||||||||||||| |||| Sbjct: 915 gaggcaaactctgaatactaggtatg 940
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 809 bits (408), Expect = 0.0 Identities = 530/566 (93%), Gaps = 11/566 (1%) Strand = Plus / Minus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 150860 tagcatggggcacgtgg-aatcccgtgtgaatcagcaagg-accaccttgcaaggctaaa 150803 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150802 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccat 150743 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||| ||| |||| |||||||||| |||| ||| | Sbjct: 150742 cggggagtgaaatagaacatgaaatcgta---agcttccaagcagtgagaggagaatcgg 150686 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 150685 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 150626 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 |||||| |||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 150625 agggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactg 150571 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 150570 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 150511 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 150510 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 150451 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150450 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 150391 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 150390 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 150331 Query: 562 gaggcaaactctgaatactagatatg 587 ||||||||||||||||||||| |||| Sbjct: 150330 gaggcaaactctgaatactaggtatg 150305 Score = 809 bits (408), Expect = 0.0 Identities = 530/566 (93%), Gaps = 11/566 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 117806 tagcatggggcacgtgg-aatcccgtgtgaatcagcaagg-accaccttgcaaggctaaa 117863 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117864 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccat 117923 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||| ||| |||| |||||||||| |||| ||| | Sbjct: 117924 cggggagtgaaatagaacatgaaatcgta---agcttccaagcagtgagaggagaatcgg 117980 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 117981 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 118040 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 |||||| |||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 118041 agggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactg 118095 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 118096 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 118155 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 118156 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 118215 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118216 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 118275 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 118276 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 118335 Query: 562 gaggcaaactctgaatactagatatg 587 ||||||||||||||||||||| |||| Sbjct: 118336 gaggcaaactctgaatactaggtatg 118361
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 809 bits (408), Expect = 0.0 Identities = 530/566 (93%), Gaps = 11/566 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 385 tagcatggggcacgtgg-aatcccgtgtgaatcagcaagg-accaccttgcaaggctaaa 442 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccat 502 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||| ||| |||| |||||||||| |||| ||| | Sbjct: 503 cggggagtgaaatagaacatgaaatcgta---agcttccaagcagtgagaggagaatcgg 559 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 560 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 619 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 |||||| |||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 620 agggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactg 674 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 675 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 734 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 735 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 794 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 854 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 855 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 914 Query: 562 gaggcaaactctgaatactagatatg 587 ||||||||||||||||||||| |||| Sbjct: 915 gaggcaaactctgaatactaggtatg 940
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 801 bits (404), Expect = 0.0 Identities = 526/561 (93%), Gaps = 8/561 (1%) Strand = Plus / Plus Query: 26 catggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaatac 85 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 372 catggggcacgtgg-aatcccgtgtgaatcagcaagg-accaccttgcaaggctaaatac 429 Query: 86 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 430 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcgg 489 Query: 146 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 205 | ||||||||||||| ||||||||| |||| ||||||||||||||| ||| |||| Sbjct: 490 ggagtgaaatagaacatgaaaccgta---agcttccaagcagtgggaggagaatcggatc 546 Query: 206 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 265 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 547 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagg 606 Query: 266 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 325 ||| | | ||||||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 607 gaaagaa--ccaccggagccatagcgaaagcgagtcttcccagggcaattgtcactgctt 664 Query: 326 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 385 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 665 atggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtg 724 Query: 386 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 445 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 725 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 784 Query: 446 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 505 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 785 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcaacagttgact 844 Query: 506 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 |||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 845 ggactatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 904 Query: 565 gcaaactctgaatactagata 585 |||||||||||||||| |||| Sbjct: 905 gcaaactctgaatactggata 925
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 797 bits (402), Expect = 0.0 Identities = 541/582 (92%), Gaps = 13/582 (2%) Strand = Plus / Minus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 |||||| |||||||||||| ||||||||| ||||||| ||||||||||||||||||||| Sbjct: 52321 tagcttgtgctctgacccgagtagcatgggacacgtgg-aatcccgtgtgaatcagcaag 52263 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 52262 g-accaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgaggg 52204 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 181 || ||||||||||||||||| |||| ||||||||||||| ||||||||| ||||||| Sbjct: 52203 aagggtgaaaagaacccccattggggagtgaaatagaacatgaaaccgta---agctccc 52147 Query: 182 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 241 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 52146 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 52089 Query: 242 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 301 |||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 52088 tcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaaagcgagta 52034 Query: 302 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 361 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52033 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 51974 Query: 362 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 421 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 51973 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 51914 Query: 422 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51913 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 51854 Query: 482 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 541 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 51853 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggc 51794 Query: 542 tgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 583 | | ||||||||||||||||| ||||||||||||||||||| Sbjct: 51793 cgtgagagcggtaccaaatcgaagcaaactctgaatactaga 51752 Score = 797 bits (402), Expect = 0.0 Identities = 541/582 (92%), Gaps = 13/582 (2%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 |||||| |||||||||||| ||||||||| ||||||| ||||||||||||||||||||| Sbjct: 37507 tagcttgtgctctgacccgagtagcatgggacacgtgg-aatcccgtgtgaatcagcaag 37565 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 37566 g-accaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgaggg 37624 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 181 || ||||||||||||||||| |||| ||||||||||||| ||||||||| ||||||| Sbjct: 37625 aagggtgaaaagaacccccattggggagtgaaatagaacatgaaaccgta---agctccc 37681 Query: 182 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 241 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 37682 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 37739 Query: 242 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 301 |||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 37740 tcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaaagcgagta 37794 Query: 302 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 361 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37795 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 37854 Query: 362 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 421 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 37855 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 37914 Query: 422 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37915 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 37974 Query: 482 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 541 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 37975 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggc 38034 Query: 542 tgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 583 | | ||||||||||||||||| ||||||||||||||||||| Sbjct: 38035 cgtgagagcggtaccaaatcgaagcaaactctgaatactaga 38076
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 797 bits (402), Expect = 0.0 Identities = 541/582 (92%), Gaps = 13/582 (2%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 |||||| |||||||||||| ||||||||| ||||||| ||||||||||||||||||||| Sbjct: 4435 tagcttgtgctctgacccgagtagcatgggacacgtgg-aatcccgtgtgaatcagcaag 4493 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 4494 g-accaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgaggg 4552 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 181 || ||||||||||||||||| |||| ||||||||||||| ||||||||| ||||||| Sbjct: 4553 aagggtgaaaagaacccccattggggagtgaaatagaacatgaaaccgta---agctccc 4609 Query: 182 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 241 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 4610 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 4667 Query: 242 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 301 |||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 4668 tcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaaagcgagta 4722 Query: 302 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 361 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4723 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 4782 Query: 362 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 421 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4783 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 4842 Query: 422 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4843 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 4902 Query: 482 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 541 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4903 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggc 4962 Query: 542 tgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 583 | | ||||||||||||||||| ||||||||||||||||||| Sbjct: 4963 cgtgagagcggtaccaaatcgaagcaaactctgaatactaga 5004
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 795 bits (401), Expect = 0.0 Identities = 549/592 (92%), Gaps = 14/592 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||| Sbjct: 4862 actagcttatgctctgacccgagtaacatggggcacgtg-aaatcccgtgtgaatcagca 4920 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4921 agg-accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgag 4979 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||| | ||| ||||||||||||| ||||||||| ||||| Sbjct: 4980 ggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaaaccgta---agctc 5036 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||| |||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 5037 ccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 5093 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 5094 actcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaaagcgag 5148 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5149 tcttcatagggctattgtcactgcttatggacccgaacctgggtgatctatccatgacca 5208 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||| || | |||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 5209 ggatgaagtttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcg 5268 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5269 gatgagttgtggttagcggtgaaatgccaatcgaacccagagctagctggttctccccga 5328 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5329 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgg 5388 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 || ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5389 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 5440
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 795 bits (401), Expect = 0.0 Identities = 549/592 (92%), Gaps = 14/592 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||| Sbjct: 4862 actagcttatgctctgacccgagtaacatggggcacgtg-aaatcccgtgtgaatcagca 4920 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4921 agg-accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgag 4979 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||| | ||| ||||||||||||| ||||||||| ||||| Sbjct: 4980 ggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaaaccgta---agctc 5036 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||| |||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 5037 ccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 5093 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 5094 actcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaaagcgag 5148 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5149 tcttcatagggctattgtcactgcttatggacccgaacctgggtgatctatccatgacca 5208 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 |||||||| || | |||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 5209 ggatgaagtttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcg 5268 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5269 gatgagttgtggttagcggtgaaatgccaatcgaacccagagctagctggttctccccga 5328 Query: 480 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 539 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5329 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgg 5388 Query: 540 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 591 || ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5389 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 5440
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 793 bits (400), Expect = 0.0 Identities = 531/570 (93%), Gaps = 11/570 (1%) Strand = Plus / Minus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 128055 tagcatggggcacgtgg-aatcccgtgtgaatcagcaagg-accaccttgcaaggctaaa 127998 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 127997 tactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaacccccat 127938 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||||||| |||||||||||||||||||| ||| | Sbjct: 127937 aggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagaattgg 127881 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 127880 atctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggtta 127821 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 ||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 127820 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactg 127766 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 127765 ctcatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaactaa 127706 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 127705 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 127646 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127645 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 127586 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 || |||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 127585 accggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 127526 Query: 562 gaggcaaactctgaatactagatatgaccc 591 ||||||||||||||||||||| |||||||| Sbjct: 127525 gaggcaaactctgaatactaggtatgaccc 127496 Score = 793 bits (400), Expect = 0.0 Identities = 531/570 (93%), Gaps = 11/570 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 95392 tagcatggggcacgtgg-aatcccgtgtgaatcagcaagg-accaccttgcaaggctaaa 95449 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 95450 tactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaacccccat 95509 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||||||| |||||||||||||||||||| ||| | Sbjct: 95510 aggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagaattgg 95566 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 95567 atctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggtta 95626 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 ||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 95627 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactg 95681 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 95682 ctcatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaactaa 95741 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95742 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 95801 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95802 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 95861 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 || |||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95862 accggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 95921 Query: 562 gaggcaaactctgaatactagatatgaccc 591 ||||||||||||||||||||| |||||||| Sbjct: 95922 gaggcaaactctgaatactaggtatgaccc 95951
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 787 bits (397), Expect = 0.0 Identities = 528/567 (93%), Gaps = 11/567 (1%) Strand = Plus / Minus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||| | |||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 146173 tagcatggggcacgcag-aatcccgtgtgaatcagcaagg-accaccttgtaaggctaaa 146116 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 146115 tactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgt 146056 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||||||| ||||||||||||||||||| ||| | Sbjct: 146055 cggggagtgaaatagaacatgaaaccgtag---gctcccaagcagtgggaggagaatcgg 145999 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 ||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 145998 atccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 145939 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 ||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 145938 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactg 145884 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 145883 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 145824 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 145823 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 145764 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145763 atgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 145704 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 145703 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 145644 Query: 562 gaggcaaactctgaatactagatatga 588 ||||||||||||||||||||| ||||| Sbjct: 145643 gaggcaaactctgaatactaggtatga 145617 Score = 787 bits (397), Expect = 0.0 Identities = 528/567 (93%), Gaps = 11/567 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||| | |||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 112289 tagcatggggcacgcag-aatcccgtgtgaatcagcaagg-accaccttgtaaggctaaa 112346 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 112347 tactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgt 112406 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||||||| ||||||||||||||||||| ||| | Sbjct: 112407 cggggagtgaaatagaacatgaaaccgtag---gctcccaagcagtgggaggagaatcgg 112463 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 ||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 112464 atccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 112523 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 ||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 112524 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactg 112578 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 112579 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 112638 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 112639 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 112698 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112699 atgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 112758 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 112759 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 112818 Query: 562 gaggcaaactctgaatactagatatga 588 ||||||||||||||||||||| ||||| Sbjct: 112819 gaggcaaactctgaatactaggtatga 112845
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 735 bits (371), Expect = 0.0 Identities = 528/574 (91%), Gaps = 14/574 (2%) Strand = Plus / Plus Query: 11 gctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccacc 69 ||||||||||| ||||||||| |||||| |||||||||||||||||||||| |||||| Sbjct: 373 gctctgacccgagtagcatgggacacgtg-taatcccgtgtgaatcagcaagg-accacc 430 Query: 70 ttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtga 129 |||||||||||||||||||||||| ||| |||| ||||||||||||||||||| ||||| Sbjct: 431 ttgcaaggctaaatactcctgggtaaccaatagtaaagtagtaccgtgagggaagggtga 490 Query: 130 aaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtg 189 |||||||||| | |||| ||||||||||||| ||||||||| |||| |||||||||| Sbjct: 491 aaagaacccc-attggggagtgaaatagaacatgaaaccgta---agctaccaagcagtg 546 Query: 190 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 249 ||||| | || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 ggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 604 Query: 250 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagg 309 || ||||||||||||||||| ||||||||||| |||||||||||||| || ||||| Sbjct: 605 agcggcttggttaagggaac-----ccaccggagccatagcgaaagcgagtattcatagg 659 Query: 310 gcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 369 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 660 actattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagct 719 Query: 370 tggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 429 | | |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 720 ttggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgt 779 Query: 430 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttga 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 780 ggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttga 839 Query: 490 ggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgag 549 ||||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||| Sbjct: 840 ggcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccgtgagag 899 Query: 550 cggtaccaaatcgaggcaaactctgaatactaga 583 |||||||||||||| ||||||||||||||||||| Sbjct: 900 cggtaccaaatcgaagcaaactctgaatactaga 933
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 724 bits (365), Expect = 0.0 Identities = 522/567 (92%), Gaps = 13/567 (2%) Strand = Plus / Minus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 6162 tagcatggggcacgtgg-aatcccgtgtgaatcagcaagg-accaccttgcaaggctaaa 6105 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||||||| ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccgta---agcctccaagcagtgggaggagaatgga 5988 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 |||| || |||||||||||||||||| |||||||||| ||||||| |||||||||| Sbjct: 5927 agggcac-----ccaccggagccgtagcgagagcgagtcttcatagggcaattgtcactg 5873 Query: 323 ctt-atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 381 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5872 ctttatggacccgaacctgggtgatctatccatgaccaggatgaagct-ggatgaaacta 5814 Query: 382 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 441 || |||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 5813 agtagaggtccgaaccgactgatgttgcaaaatcagcggatgagttgtggttaggggtga 5754 Query: 442 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5753 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 5694 Query: 502 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 560 ||||||| | ||||||||||||||||||||||||| ||| | | |||||||| | || Sbjct: 5693 gactggaccgtctaggggtaaagcactgtttcggtataggccgtgtaagcggtacgacat 5634 Query: 561 cgaggcaaactctgaatactagatatg 587 ||||||||||| ||||||||||||||| Sbjct: 5633 cgaggcaaactatgaatactagatatg 5607
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 720 bits (363), Expect = 0.0 Identities = 366/367 (99%) Strand = Plus / Plus Query: 225 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 285 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 344 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 345 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 181 Query: 405 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 241 Query: 465 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 301 Query: 525 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 361 Query: 585 atgaccc 591 ||||||| Sbjct: 362 atgaccc 368
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 718 bits (362), Expect = 0.0 Identities = 365/366 (99%) Strand = Plus / Plus Query: 226 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 286 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 345 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 346 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 180 Query: 406 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 240 Query: 466 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 300 Query: 526 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 360 Query: 586 tgaccc 591 |||||| Sbjct: 361 tgaccc 366
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 704 bits (355), Expect = 0.0 Identities = 461/491 (93%), Gaps = 13/491 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 337 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 395 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 454 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 455 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 511 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 512 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 569 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 570 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 624 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 625 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 684 Query: 360 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 419 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 685 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 744 Query: 420 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 804 Query: 480 aatgcgttgag 490 ||||||||||| Sbjct: 805 aatgcgttgag 815
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 688 bits (347), Expect = 0.0 Identities = 500/545 (91%), Gaps = 7/545 (1%) Strand = Plus / Plus Query: 41 aatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgat 100 |||||||||||||||||| ||| ||||||||| ||||||||||| ||||| ||||||||| Sbjct: 144322 aatcccgtgtgaatcagcgagg-accaccttgtaaggctaaatattcctgagtgaccgat 144380 Query: 101 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 160 ||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 144381 agcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaac 144440 Query: 161 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 220 |||||||| | |||||||||||||||||||| ||| | ||||||| ||||||||||| Sbjct: 144441 atgaaaccgcg---agctcccaagcagtgggaggagaatgagatctctaaccgcgtgcct 144497 Query: 221 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 280 |||||||||||||||||||||| ||||| ||||| ||||||||| | ||||| ||| Sbjct: 144498 gttgaagaatgagccggcgacttgtaggcggtggcccggttaagggggag-aaccc-ccg 144555 Query: 281 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 340 ||||||||||||||||||||||| | |||| |||||||| |||||| ||||||||||| Sbjct: 144556 gagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaacctg 144615 Query: 341 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 400 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 144616 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 144675 Query: 401 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 460 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144676 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 144735 Query: 461 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggt 519 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 144736 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggt 144795 Query: 520 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 ||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 144796 aaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 144855 Query: 580 tagat 584 ||||| Sbjct: 144856 tagat 144860 Score = 688 bits (347), Expect = 0.0 Identities = 500/545 (91%), Gaps = 7/545 (1%) Strand = Plus / Minus Query: 41 aatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgat 100 |||||||||||||||||| ||| ||||||||| ||||||||||| ||||| ||||||||| Sbjct: 88529 aatcccgtgtgaatcagcgagg-accaccttgtaaggctaaatattcctgagtgaccgat 88471 Query: 101 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 160 ||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 88470 agcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaac 88411 Query: 161 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 220 |||||||| | |||||||||||||||||||| ||| | ||||||| ||||||||||| Sbjct: 88410 atgaaaccgcg---agctcccaagcagtgggaggagaatgagatctctaaccgcgtgcct 88354 Query: 221 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 280 |||||||||||||||||||||| ||||| ||||| ||||||||| | ||||| ||| Sbjct: 88353 gttgaagaatgagccggcgacttgtaggcggtggcccggttaagggggag-aaccc-ccg 88296 Query: 281 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 340 ||||||||||||||||||||||| | |||| |||||||| |||||| ||||||||||| Sbjct: 88295 gagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaacctg 88236 Query: 341 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 400 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 88235 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 88176 Query: 401 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 460 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88175 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 88116 Query: 461 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggt 519 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 88115 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggt 88056 Query: 520 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 ||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 88055 aaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 87996 Query: 580 tagat 584 ||||| Sbjct: 87995 tagat 87991
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 670 bits (338), Expect = 0.0 Identities = 374/386 (96%), Gaps = 5/386 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46933 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 46992 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46993 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 47052 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47053 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 47112 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 47113 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 47172 Query: 565 gcaaactctgaatactagatatgacc 590 |||||||||||||||||||||||||| Sbjct: 47173 gcaaactctgaatactagatatgacc 47198 Score = 250 bits (126), Expect = 4e-63 Identities = 181/195 (92%), Gaps = 6/195 (3%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 46614 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 46672 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46673 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 46731 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 46732 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 46788 Query: 180 ccaagcagtgggagg 194 |||||||||||||| Sbjct: 46789 tcaagcagtgggagg 46803
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 656 bits (331), Expect = 0.0 Identities = 508/561 (90%), Gaps = 11/561 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 385 tagcatggggcacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 442 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 443 tactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccat 502 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||||||| ||| ||||||||||||||| ||| | Sbjct: 503 cggggagtgaaatagaacatgaaaccgta---agcctccaagcagtgggaggagaatgga 559 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 560 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 619 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 ||| | ||| || |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 620 aggcga--gaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgtcactg 674 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| | || Sbjct: 675 cttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagccaa 734 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 735 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 794 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 795 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 854 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 855 actggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 914 Query: 562 gaggcaaactctgaatactag 582 ||||||||||||||||||||| Sbjct: 915 gaggcaaactctgaatactag 935
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 656 bits (331), Expect = 0.0 Identities = 508/561 (90%), Gaps = 11/561 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 398 tagcatggggcacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 455 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 456 tactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccat 515 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||||||| ||| ||||||||||||||| ||| | Sbjct: 516 cggggagtgaaatagaacatgaaaccgta---agcctccaagcagtgggaggagaatgga 572 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 573 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 632 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 ||| | ||| || |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 633 aggcga--gaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgtcactg 687 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| | || Sbjct: 688 cttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagccaa 747 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 748 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 807 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 808 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 867 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 868 actggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 927 Query: 562 gaggcaaactctgaatactag 582 ||||||||||||||||||||| Sbjct: 928 gaggcaaactctgaatactag 948
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 656 bits (331), Expect = 0.0 Identities = 360/366 (98%), Gaps = 3/366 (0%) Strand = Plus / Plus Query: 2 ctagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaa 60 |||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 265 ctagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagcaa 323 Query: 61 ggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 gg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 382 Query: 121 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 442 Query: 181 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 502 Query: 241 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 503 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 562 Query: 301 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 360 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 563 cttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 622 Query: 361 gatgaa 366 |||||| Sbjct: 623 gatgaa 628
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 652 bits (329), Expect = 0.0 Identities = 509/562 (90%), Gaps = 13/562 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 502 tagcatggggcacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 559 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 560 tactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccat 619 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 620 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 676 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 677 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 736 Query: 263 agggaacg-gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 321 ||| || ||| || |||||||||||||||||||||||| |||||||| ||||||| Sbjct: 737 agg---cgtgaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgtcact 790 Query: 322 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 381 ||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| | | Sbjct: 791 gcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagcca 850 Query: 382 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 441 || ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 851 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtga 910 Query: 442 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 501 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 911 aatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 970 Query: 502 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 560 |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 971 gactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaat 1030 Query: 561 cgaggcaaactctgaatactag 582 |||||||||||||||||||||| Sbjct: 1031 cgaggcaaactctgaatactag 1052
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 650 bits (328), Expect = 0.0 Identities = 367/380 (96%), Gaps = 5/380 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 161 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 220 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 280 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 281 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 340 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 341 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 400 Query: 565 gcaaactctgaatactagat 584 |||||||||||||||||||| Sbjct: 401 gcaaactctgaatactagat 420
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 646 bits (326), Expect = 0.0 Identities = 417/444 (93%), Gaps = 10/444 (2%) Strand = Plus / Plus Query: 148 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 207 ||||||||||||| ||||||||| |||||||||||||||||||| | || ||| Sbjct: 364690 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctc 364745 Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364746 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 364805 Query: 268 acggaacccaccggagccgtagcgaaag-cgagtcttaatagggcgattgtcactgctta 326 || ||||||||||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 364806 ac-----ccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgctta 364860 Query: 327 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 386 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | Sbjct: 364861 tggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtgg 364920 Query: 387 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 446 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 364921 aggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgc 364980 Query: 447 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364981 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 365040 Query: 507 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 566 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 365041 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 365100 Query: 567 aaactctgaatactagatatgacc 590 |||||||||||||||||||||||| Sbjct: 365101 aaactctgaatactagatatgacc 365124 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 93 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 138 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 11520 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 11475
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 646 bits (326), Expect = 0.0 Identities = 371/386 (96%), Gaps = 5/386 (1%) Strand = Plus / Minus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129854 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 129795 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129794 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 129735 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129734 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 129675 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 129674 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 129615 Query: 565 gcaaactctgaatactagatatgacc 590 |||||||||||||||||||||||||| Sbjct: 129614 gcaaactctgaatactagatatgacc 129589 Score = 646 bits (326), Expect = 0.0 Identities = 371/386 (96%), Gaps = 5/386 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102602 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 102661 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102662 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 102721 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102722 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 102781 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 102782 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 102841 Query: 565 gcaaactctgaatactagatatgacc 590 |||||||||||||||||||||||||| Sbjct: 102842 gcaaactctgaatactagatatgacc 102867 Score = 250 bits (126), Expect = 4e-63 Identities = 181/195 (92%), Gaps = 6/195 (3%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 130173 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 130115 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 130114 agg-accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgag 130056 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 130055 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 129999 Query: 180 ccaagcagtgggagg 194 ||||||||||||||| Sbjct: 129998 ccaagcagtgggagg 129984 Score = 250 bits (126), Expect = 4e-63 Identities = 181/195 (92%), Gaps = 6/195 (3%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 102283 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 102341 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 102342 agg-accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgag 102400 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 102401 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 102457 Query: 180 ccaagcagtgggagg 194 ||||||||||||||| Sbjct: 102458 ccaagcagtgggagg 102472
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 642 bits (324), Expect = 0.0 Identities = 366/380 (96%), Gaps = 5/380 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 236 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 296 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 297 gccgctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 356 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 357 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 416 Query: 565 gcaaactctgaatactagat 584 |||||||||||||||||||| Sbjct: 417 gcaaactctgaatactagat 436
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 636 bits (321), Expect = e-179 Identities = 518/578 (89%), Gaps = 12/578 (2%) Strand = Plus / Minus Query: 5 gcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaaggn 63 ||||| ||||||||||| ||||||||||||||||| ||||||||| |||||||| ||| Sbjct: 138901 gcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgcgaatcagcgagg- 138844 Query: 64 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 123 ||||||| | ||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 138843 accacctcgtaaggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaa 138784 Query: 124 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 183 |||||||||||||||||| ||| ||||||||||||| ||||||||| ||||||| | Sbjct: 138783 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctcccga 138727 Query: 184 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 243 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 138726 gcagtgggaggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgactt 138667 Query: 244 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 303 |||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 138666 ataggcggcggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtctt 138612 Query: 304 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 363 ||||| | |||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 138611 cccagggcaactgtcgctgcttatggacccgaacccgggtgatctatccatgaccaggat 138552 Query: 364 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 423 ||||||||||| ||| | | ||||||||||||||||||||||||| |||||||||||| Sbjct: 138551 gaagcttggatagaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatg 138492 Query: 424 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 483 ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 138491 agtcgtggttaggggtgaaatgccactcgaacccggagctagctggttctccccgaaatg 138432 Query: 484 cgttgaggcgcagcagttgact-ggacatctaggggtaaagcactgtttcggtgcgggct 542 |||||||||||||| ||||||| || | || | |||||||||||||| ||||||||||| Sbjct: 138431 cgttgaggcgcagcggttgactaggctacctggaggtaaagcactgttacggtgcgggct 138372 Query: 543 gcgcgagcggtaccaaatcgaggcaaactctgaatact 580 ||| |||| |||||||| |||||||||||||||||||| Sbjct: 138371 gcgagagcagtaccaaaccgaggcaaactctgaatact 138334 Score = 636 bits (321), Expect = e-179 Identities = 518/578 (89%), Gaps = 12/578 (2%) Strand = Plus / Plus Query: 5 gcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaaggn 63 ||||| ||||||||||| ||||||||||||||||| ||||||||| |||||||| ||| Sbjct: 82976 gcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgcgaatcagcgagg- 83033 Query: 64 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 123 ||||||| | ||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 83034 accacctcgtaaggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaa 83093 Query: 124 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 183 |||||||||||||||||| ||| ||||||||||||| ||||||||| ||||||| | Sbjct: 83094 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctcccga 83150 Query: 184 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 243 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 83151 gcagtgggaggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgactt 83210 Query: 244 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 303 |||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 83211 ataggcggcggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtctt 83265 Query: 304 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 363 ||||| | |||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 83266 cccagggcaactgtcgctgcttatggacccgaacccgggtgatctatccatgaccaggat 83325 Query: 364 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 423 ||||||||||| ||| | | ||||||||||||||||||||||||| |||||||||||| Sbjct: 83326 gaagcttggatagaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatg 83385 Query: 424 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 483 ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 83386 agtcgtggttaggggtgaaatgccactcgaacccggagctagctggttctccccgaaatg 83445 Query: 484 cgttgaggcgcagcagttgact-ggacatctaggggtaaagcactgtttcggtgcgggct 542 |||||||||||||| ||||||| || | || | |||||||||||||| ||||||||||| Sbjct: 83446 cgttgaggcgcagcggttgactaggctacctggaggtaaagcactgttacggtgcgggct 83505 Query: 543 gcgcgagcggtaccaaatcgaggcaaactctgaatact 580 ||| |||| |||||||| |||||||||||||||||||| Sbjct: 83506 gcgagagcagtaccaaaccgaggcaaactctgaatact 83543
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 634 bits (320), Expect = e-179 Identities = 413/442 (93%), Gaps = 9/442 (2%) Strand = Plus / Plus Query: 112 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 171 |||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta 60 Query: 172 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 231 || ||||||||||||||||| || | | ||||||||||||||||||||||||||| Sbjct: 61 ---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatg 116 Query: 232 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 291 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 117 agccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcg 171 Query: 292 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 351 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 172 aaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatc 231 Query: 352 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 411 ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 232 catgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaag 291 Query: 412 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 351 Query: 472 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 531 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 352 ctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgttt 411 Query: 532 cggtgcgggctgcgcgagcggt 553 |||||||||| ||| ||||||| Sbjct: 412 cggtgcgggccgcgagagcggt 433
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 630 bits (318), Expect = e-177 Identities = 369/386 (95%), Gaps = 5/386 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatcgag 935 Query: 565 gcaaactctgaatactagatatgacc 590 |||||||||||||||||||||||||| Sbjct: 936 gcaaactctgaatactagatatgacc 961 Score = 234 bits (118), Expect = 3e-58 Identities = 179/195 (91%), Gaps = 6/195 (3%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 370 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 428 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 429 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtactaccgtgag 487 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| || ||||||||||||| |||||||| | ||||| Sbjct: 488 ggaagggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg---taagctc 544 Query: 180 ccaagcagtgggagg 194 ||||||||||||||| Sbjct: 545 ccaagcagtgggagg 559
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 630 bits (318), Expect = e-177 Identities = 370/386 (95%), Gaps = 6/386 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177520 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 177579 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 177580 ggaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtggttaggggtgaaat 177638 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177639 gccactcgcacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 177698 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| Sbjct: 177699 tggacatctaggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatcgag 177758 Query: 565 gcaaactctgaatactagatatgacc 590 |||||||||||||||||||||||||| Sbjct: 177759 gcaaactctgaatactagatatgacc 177784 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 93 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 138 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 93 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 138 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 624 bits (315), Expect = e-176 Identities = 526/588 (89%), Gaps = 14/588 (2%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 ||||||||||| ||||||| ||||||||| ||||||| ||||||||||||||||||||| Sbjct: 383 tagcttatgctttgacccgagtagcatgggacacgtgg-aatcccgtgtgaatcagcaag 441 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | |||||||||||||||||||||||| ||||||||| |||| ||||||||||| |||||| Sbjct: 442 g-accaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtaccatgaggg 500 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 181 || ||||||||||||||| | |||| ||||||||||||| ||||| | | |||| || Sbjct: 501 aagggtgaaaagaacccctattggggagtgaaatagaacatgaaaacata---agctacc 557 Query: 182 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 241 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 558 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 615 Query: 242 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 301 ||||| | |||||| ||||||||| |||| ||||||||||| |||||||||| |||| Sbjct: 616 tcataagtagtggcctggttaagg----ggaa-ccaccggagccatagcgaaagcaagtc 670 Query: 302 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 361 || ||||||| | ||||| |||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 671 ttcatagggcaaatgtcattgcttatgtacccgaacttgggtgatctaaccatgaccagg 730 Query: 362 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 421 ||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 731 atgaaatttggttgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 790 Query: 422 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 481 ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 791 tgagttgtggttaggggtgaaatgccaatcgaacccaaagctagctggttctccccgaaa 850 Query: 482 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 541 |||||| ||| ||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 851 tgcgtttaggggcagcagtt-accggacatctaggggtaaagcactgtttcggtgcgggt 909 Query: 542 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac 589 || |||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 910 ctcgagagcggtaccaaattgaggcaaactatgaatactagatatgac 957
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 611 bits (308), Expect = e-171 Identities = 502/561 (89%), Gaps = 12/561 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||| |||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 387 tagcatgggacacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 444 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagagaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||| ||| |||| |||||||||||||| ||| Sbjct: 505 cggggagtgaaatagaacatgaaatcgta---agctttcaagcagtgggaggagaattca 561 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 621 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 622 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 675 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||||| || Sbjct: 676 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaaaccaa 735 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 795 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 796 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 855 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 856 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 915 Query: 562 gaggcaaactctgaatactag 582 ||||||||||||||||||||| Sbjct: 916 gaggcaaactctgaatactag 936
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 607 bits (306), Expect = e-170 Identities = 367/386 (95%), Gaps = 6/386 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 754 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 814 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 874 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 875 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 934 Query: 565 gcaaactctgaatactagatatgacc 590 |||||||||||||||||||||||||| Sbjct: 935 gcaaactctgaatactagatatgacc 960 Score = 232 bits (117), Expect = 1e-57 Identities = 178/194 (91%), Gaps = 6/194 (3%) Strand = Plus / Plus Query: 2 ctagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaa 60 |||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 371 ctagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagcaa 429 Query: 61 ggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 120 || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 430 gg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagg 488 Query: 121 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 180 ||| ||||||||||||||||| ||| ||||||||| ||| |||||||| | |||||| Sbjct: 489 gaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctcc 545 Query: 181 caagcagtgggagg 194 |||||||||||||| Sbjct: 546 caagcagtgggagg 559
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 605 bits (305), Expect = e-170 Identities = 367/386 (95%), Gaps = 5/386 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 935 Query: 565 gcaaactctgaatactagatatgacc 590 |||||||||||||||||||||||||| Sbjct: 936 gcaaactctgaatactagatatgacc 961 Score = 232 bits (117), Expect = 1e-57 Identities = 178/194 (91%), Gaps = 6/194 (3%) Strand = Plus / Plus Query: 2 ctagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaa 60 |||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 371 ctagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagcaa 429 Query: 61 ggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 120 || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 430 gg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagg 488 Query: 121 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 180 ||| ||||||||||||||||| || ||||||||||||| |||||||| | |||||| Sbjct: 489 gaagggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg---taagctcc 545 Query: 181 caagcagtgggagg 194 |||||||||||||| Sbjct: 546 caagcagtgggagg 559
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 601 bits (303), Expect = e-168 Identities = 368/387 (95%), Gaps = 7/387 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 265 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 323 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 324 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 383 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 384 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 814 Query: 444 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 874 Query: 504 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 563 ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 875 ctggacatctaagggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 934 Query: 564 ggcaaactctgaatactagatatgacc 590 |||||||||||||||||| |||||||| Sbjct: 935 ggcaaactctgaatactaaatatgacc 961 Score = 240 bits (121), Expect = 4e-60 Identities = 179/194 (92%), Gaps = 6/194 (3%) Strand = Plus / Plus Query: 2 ctagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaa 60 |||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 371 ctagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagcaa 429 Query: 61 ggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 120 || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 430 gg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagg 488 Query: 121 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 180 ||| ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||| Sbjct: 489 gaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcc 545 Query: 181 caagcagtgggagg 194 |||||||||||||| Sbjct: 546 caagcagtgggagg 559
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 595 bits (300), Expect = e-167 Identities = 500/561 (89%), Gaps = 12/561 (2%) Strand = Plus / Minus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||| |||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 124878 tagcatgggacacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 124821 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 124820 tactcctgggtgaccgatagagaagaagtaccgcgagggaaaggtgaaaagaacccccat 124761 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||| ||| |||| |||||||||||||| ||| Sbjct: 124760 cggggagtgaaatagaacatgaaatcgta---agctttcaagcagtgggaggagaattca 124704 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 124703 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 124644 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 124643 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 124590 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | || Sbjct: 124589 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagccaa 124530 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 124529 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 124470 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 124469 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 124410 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 124409 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 124350 Query: 562 gaggcaaactctgaatactag 582 ||| ||||||||||||||||| Sbjct: 124349 gagtcaaactctgaatactag 124329 Score = 595 bits (300), Expect = e-167 Identities = 500/561 (89%), Gaps = 12/561 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||| |||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 94988 tagcatgggacacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 95045 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 95046 tactcctgggtgaccgatagagaagaagtaccgcgagggaaaggtgaaaagaacccccat 95105 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||| ||| |||| |||||||||||||| ||| Sbjct: 95106 cggggagtgaaatagaacatgaaatcgta---agctttcaagcagtgggaggagaattca 95162 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 95163 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 95222 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 95223 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 95276 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | || Sbjct: 95277 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagccaa 95336 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 95337 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 95396 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95397 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 95456 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95457 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 95516 Query: 562 gaggcaaactctgaatactag 582 ||| ||||||||||||||||| Sbjct: 95517 gagtcaaactctgaatactag 95537
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 589 bits (297), Expect = e-165 Identities = 396/426 (92%), Gaps = 11/426 (2%) Strand = Plus / Plus Query: 114 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 173 |||||||||| |||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 1 cgtgagggaagggtgaaaagaaccc--atcggggagtgaaatagaacatgaaaccgta-- 56 Query: 174 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 233 || ||||||||||||||||| || | | ||||||||||||||||||||||||||||| Sbjct: 57 -agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgag 114 Query: 234 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 293 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 115 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 169 Query: 294 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 353 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 229 Query: 354 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 413 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 230 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 289 Query: 414 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 290 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggctct 349 Query: 474 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 533 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 350 ccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcg 409 Query: 534 gtgcgg 539 |||||| Sbjct: 410 gtgcgg 415
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 587 bits (296), Expect = e-164 Identities = 338/352 (96%), Gaps = 5/352 (1%) Strand = Plus / Plus Query: 239 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 298 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 299 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 358 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 359 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 418 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 766 Query: 419 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 826 Query: 479 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 886 Query: 539 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 887 ggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 938 Score = 234 bits (118), Expect = 3e-58 Identities = 179/195 (91%), Gaps = 6/195 (3%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 370 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 428 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 429 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtactaccgtgag 487 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||| ||| |||||||| | ||||| Sbjct: 488 ggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctc 544 Query: 180 ccaagcagtgggagg 194 ||||||||||||||| Sbjct: 545 ccaagcagtgggagg 559
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 581 bits (293), Expect = e-162 Identities = 314/321 (97%) Strand = Plus / Plus Query: 270 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 329 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 330 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 389 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 390 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 781 Query: 450 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 841 Query: 510 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 569 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 842 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 901 Query: 570 ctctgaatactagatatgacc 590 ||||||||||||||||||||| Sbjct: 902 ctctgaatactagatatgacc 922 Score = 222 bits (112), Expect = 1e-54 Identities = 183/201 (91%), Gaps = 7/201 (3%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 370 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 428 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 487 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||| ||||| ||| ||||||||| ||| |||||||| | ||||| Sbjct: 488 ggaagggtgaaaagaa-ccccatcggggagtgaaataaaacatgaaaccg---taagctc 543 Query: 180 ccaagcagtgggaggggaaag 200 |||||||||||||| ||||| Sbjct: 544 tcaagcagtgggaggagaaag 564
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 569 bits (287), Expect = e-159 Identities = 468/525 (89%), Gaps = 10/525 (1%) Strand = Plus / Plus Query: 64 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 123 ||||||||| ||||||||||||||||||||||||||||| |||| ||||||| ||||||| Sbjct: 426 accaccttgtaaggctaaatactcctgggtgaccgatagtgaagaagtaccgcgagggaa 485 Query: 124 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 183 |||||||||||||||||| ||| ||||||||||||| ||||||| | |||| ||| Sbjct: 486 aggtgaaaagaacccccataggggagtgaaatagaacatgaaaccata---agctttcaa 542 Query: 184 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 243 ||||||||||| | | | || ||||||||||||||||||||||||||||||||||| Sbjct: 543 gcagtgggaggaggattgaacctttgaccgcgtgcctgttgaagaatgagccggcgactt 602 Query: 244 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 303 |||||||||||| |||||||||||| |||||| |||| |||||||||| |||||| Sbjct: 603 ataggcagtggcatggttaagggaat-----ccaccgaagccatagcgaaagcaagtctt 657 Query: 304 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 363 |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| Sbjct: 658 tc-agggcgattgtcactgtttatggacccgaacccgggtgatctatccatgaccaggat 716 Query: 364 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 423 ||||||||| | |||| ||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 717 gaagcttgggtaaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 776 Query: 424 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 483 |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 777 agttgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatg 836 Query: 484 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 542 |||||||||||||| ||| | ||| | || |||||||||||||||||||||||||||||| Sbjct: 837 cgttgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggct 896 Query: 543 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 587 ||| |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 897 gcgaaagcggtaccaaatcgatgcaaactctgaatactaaatatg 941
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 565 bits (285), Expect = e-158 Identities = 499/563 (88%), Gaps = 12/563 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| ||||||||||||||| || ||| ||||||| | ||| ||||| Sbjct: 384 tagcatggggcacgtg-aaatcccgtgtgaatccgcgagg-accacctcgtaagactaaa 441 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 442 tactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccat 501 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||||||| |||| |||||||||||||| | || Sbjct: 502 cggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggttttg 558 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 559 atctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggtta 618 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 ||| | | || ||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 619 aggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcactg 673 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| | Sbjct: 674 tctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaactca 733 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 734 gtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 793 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||| |||||| | ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 794 atgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 853 Query: 503 act--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 560 | || ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 854 gatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 913 Query: 561 cgaggcaaactctgaatactaga 583 ||| ||||||||||||||||||| Sbjct: 914 cgatgcaaactctgaatactaga 936
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 565 bits (285), Expect = e-158 Identities = 499/563 (88%), Gaps = 12/563 (2%) Strand = Plus / Minus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| ||||||||||||||| || ||| ||||||| | ||| ||||| Sbjct: 115278 tagcatggggcacgtg-aaatcccgtgtgaatccgcgagg-accacctcgtaagactaaa 115221 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 115220 tactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccat 115161 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||||||| |||| |||||||||||||| | || Sbjct: 115160 cggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggttttg 115104 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 115103 atctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggtta 115044 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 ||| | | || ||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 115043 aggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcactg 114989 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| | Sbjct: 114988 tctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaactca 114929 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 114928 gtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 114869 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||| |||||| | ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 114868 atgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 114809 Query: 503 act--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 560 | || ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 114808 gatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 114749 Query: 561 cgaggcaaactctgaatactaga 583 ||| ||||||||||||||||||| Sbjct: 114748 cgatgcaaactctgaatactaga 114726 Score = 565 bits (285), Expect = e-158 Identities = 499/563 (88%), Gaps = 12/563 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| ||||||||||||||| || ||| ||||||| | ||| ||||| Sbjct: 86710 tagcatggggcacgtg-aaatcccgtgtgaatccgcgagg-accacctcgtaagactaaa 86767 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 86768 tactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccat 86827 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||||||| |||| |||||||||||||| | || Sbjct: 86828 cggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggttttg 86884 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 86885 atctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggtta 86944 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 ||| | | || ||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 86945 aggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcactg 86999 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| | Sbjct: 87000 tctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaactca 87059 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 87060 gtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 87119 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||| |||||| | ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 87120 atgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 87179 Query: 503 act--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 560 | || ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 87180 gatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 87239 Query: 561 cgaggcaaactctgaatactaga 583 ||| ||||||||||||||||||| Sbjct: 87240 cgatgcaaactctgaatactaga 87262
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 551 bits (278), Expect = e-154 Identities = 498/566 (87%), Gaps = 14/566 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 344 tagcatggggcacgtgg-aatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 401 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 402 tactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccgt 461 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||||||| ||| |||||||||||||| ||| Sbjct: 462 aggggagtgaaatagaacatgaaaccgta---agcctacaagcagtgggaggagaataga 518 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||||||||||||||||||||||||| ||| | |||||| |||||| Sbjct: 519 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcctggtta 578 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 || ||| || ||||||||||||||||| |||| || | || || |||||||| Sbjct: 579 agagaat-------actggagccgtagcgaaagcaagtcatatttgg-cgcatgtcactg 630 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||| |||||||||| |||||||||||||||| ||||| |||| ||||| |||| | || Sbjct: 631 tttatagacccgaacccgggtgatctatccatggccagggtgaaacttgggtgaagccaa 690 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 691 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 750 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 751 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattg 810 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 | ||||| | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 811 attggactacttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 870 Query: 562 gaggcaaactctgaatactagatatg 587 ||||||||||||||||||||| |||| Sbjct: 871 gaggcaaactctgaatactaggtatg 896
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 537 bits (271), Expect = e-149 Identities = 495/564 (87%), Gaps = 7/564 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||| |||||| ||||||||||||||| || ||| ||||||| ||||||||||| Sbjct: 393 tagcatgggacacgtg-aaatcccgtgtgaatctgcgagg-accacctcgcaaggctaaa 450 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 451 tacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccat 510 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||| ||||| ||||||||| ||| ||||||||||||| ||| | Sbjct: 511 aggggagtgaaaaagaacatgaaaccgtag---gctttcaagcagtgggagaagaatttt 567 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 568 atctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatagtggctgggtta 627 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 |||||| | | || |||||| |||||||||| |||||| ||||| |||||||||| Sbjct: 628 agggaatttatgc-actggagccatagcgaaagcaagtcttttcagggctattgtcactg 686 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||| Sbjct: 687 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgaaactaa 746 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 747 gtggaggtcccaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 806 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 807 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 866 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 ||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 867 actggactatccaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 926 Query: 562 gaggcaaactctgaatactagata 585 ||| ||||||||||||||| |||| Sbjct: 927 gagacaaactctgaatactggata 950
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 535 bits (270), Expect = e-149 Identities = 333/350 (95%), Gaps = 8/350 (2%) Strand = Plus / Plus Query: 245 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 303 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 304 aatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccagg 361 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 362 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 421 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 729 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 788 Query: 422 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct-ccccgaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 789 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaa 848 Query: 481 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 908 Query: 541 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc 590 | ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 909 ccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacc 958 Score = 157 bits (79), Expect = 5e-35 Identities = 130/141 (92%), Gaps = 6/141 (4%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 359 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 417 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| ||||||||||||||||||||||| | |||||||||||| |||||||||||||||| Sbjct: 418 agg-accaccttgcaaggctaaatactac--ggtgaccgatagtgaagtagtaccgtgag 474 Query: 120 ggaaaggtgaaaagaaccccc 140 |||| |||| ||||||||||| Sbjct: 475 ggaagggtg-aaagaaccccc 494
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 535 bits (270), Expect = e-149 Identities = 491/559 (87%), Gaps = 7/559 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||| |||| || ||||| |||||||| || ||| ||||||| | ||||||||| Sbjct: 4431 tagcatgggacacg-ggaaatcctgtgtgaatttgcgagg-accacctcgtaaggctaaa 4488 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4489 tactcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccat 4548 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||| ||||| ||||||||| || |||||||||||||| ||| Sbjct: 4549 aggggagtgaaagagaacatgaaaccgtag---gccttcaagcagtgggaggagaattgt 4605 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4606 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 4665 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4666 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 4724 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 4725 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 4784 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 4785 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 4844 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 4845 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 4904 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 4905 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 4964 Query: 562 gaggcaaactctgaatact 580 ||||||||||||||||||| Sbjct: 4965 gaggcaaactctgaatact 4983
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 535 bits (270), Expect = e-149 Identities = 491/559 (87%), Gaps = 7/559 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||| |||| || ||||| |||||||| || ||| ||||||| | ||||||||| Sbjct: 398 tagcatgggacacg-ggaaatcctgtgtgaatttgcgagg-accacctcgtaaggctaaa 455 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 456 tactcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccat 515 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||| ||||| ||||||||| || |||||||||||||| ||| Sbjct: 516 aggggagtgaaagagaacatgaaaccgtag---gccttcaagcagtgggaggagaattgt 572 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 692 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 752 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 811 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 812 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 871 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 872 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 931 Query: 562 gaggcaaactctgaatact 580 ||||||||||||||||||| Sbjct: 932 gaggcaaactctgaatact 950
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 535 bits (270), Expect = e-149 Identities = 491/559 (87%), Gaps = 7/559 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||| |||| || ||||| |||||||| || ||| ||||||| | ||||||||| Sbjct: 398 tagcatgggacacg-ggaaatcctgtgtgaatttgcgagg-accacctcgtaaggctaaa 455 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 456 tactcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccat 515 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||| ||||| ||||||||| || |||||||||||||| ||| Sbjct: 516 aggggagtgaaagagaacatgaaaccgtag---gccttcaagcagtgggaggagaattgt 572 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 692 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 383 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 442 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 752 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 811 Query: 443 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 502 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 812 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 871 Query: 503 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 872 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 931 Query: 562 gaggcaaactctgaatact 580 ||||||||||||||||||| Sbjct: 932 gaggcaaactctgaatact 950
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 500 bits (252), Expect = e-138 Identities = 473/544 (86%), Gaps = 12/544 (2%) Strand = Plus / Plus Query: 46 cgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgatagcga 105 ||||||||||||| ||| ||||||| | |||||||||||||||| ||||| |||||| || Sbjct: 813 cgtgtgaatcagcgagg-accacctcgtaaggctaaatactcctaggtgatcgatagtga 871 Query: 106 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 165 || ||||||||||||||||||||||||||||||||| ||| ||||||||||| |||| Sbjct: 872 agaagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaatagactatgaa 931 Query: 166 accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 225 ||||| |||| ||||||||||||| ||| | |||| |||||||||||||||||| Sbjct: 932 accgta---agcttacaagcagtgggagaagaatctaatctttgaccgcgtgcctgttga 988 Query: 226 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 285 ||||||||||||||||| ||| |||||||| |||||||||| | |||| |||| Sbjct: 989 agaatgagccggcgacttataagcagtggcctggttaagggtat-------accgaagcc 1041 Query: 286 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 345 |||||||||||||||| | |||||| |||||||| ||||||||||||||| |||||| Sbjct: 1042 gtagcgaaagcgagtcattcaagggcgcatgtcactgtttatggacccgaacccgggtga 1101 Query: 346 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 405 |||||||||| ||||| |||||||||| |||| | ||| |||| |||||||||||| || Sbjct: 1102 tctatccatggccagggtgaagcttgggtgaagccaagtggaggcccgaaccgactggtg 1161 Query: 406 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 465 ||||| || ||||||||||| ||||||||||||||||||||||||||||| | ||||||| Sbjct: 1162 ttgaaaaaccagcggatgagctgtggttaggggtgaaatgccactcgaactcggagctag 1221 Query: 466 ctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagc 524 |||||||||||||||||||||||||||||||| |||||| || | |||||||||||| Sbjct: 1222 ctggttctccccgaaatgcgttgaggcgcagcgattgactaaactgtttaggggtaaagc 1281 Query: 525 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 584 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1282 actgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactagac 1341 Query: 585 atga 588 |||| Sbjct: 1342 atga 1345
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 500 bits (252), Expect = e-138 Identities = 362/393 (92%), Gaps = 12/393 (3%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 382 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 324 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 265 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| Sbjct: 264 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---agctc 208 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||| Sbjct: 207 ccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcg 149 Query: 240 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 148 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 94 Query: 300 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 359 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 34 Query: 360 ggatgaagcttggatgaaactaagcagaggtcc 392 ||||||||||||| |||||||||| ||||||| Sbjct: 33 ggatgaagcttgggtgaaactaagtggaggtcc 1
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 498 bits (251), Expect = e-137 Identities = 479/549 (87%), Gaps = 12/549 (2%) Strand = Plus / Plus Query: 41 aatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgat 100 |||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||| || Sbjct: 396 aatcccgtgtgaatcagcaagg-accaccttgaaaggctaaatactcttgggtgaccaat 454 Query: 101 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 160 || |||||||||||||||||||| ||||||||||||||||| |||| |||||| |||||| Sbjct: 455 agtgaagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaactagaac 514 Query: 161 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 220 ||||| | | ||| ||||||||||||||| || || | |||||||| |||||| Sbjct: 515 atgaaaacatat---gctaccaagcagtgggaggagacaggg--ctctgaccacgtgccc 569 Query: 221 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 280 ||||||||||||| |||||||||||| | |||||| ||||||||| |||| |||||| Sbjct: 570 gttgaagaatgagtcggcgactcataagtagtggcctggttaagg----ggaa-ccaccg 624 Query: 281 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 340 ||||| |||||||||| |||||| |||||| | ||||| ||||| ||||||||||| || Sbjct: 625 gagccatagcgaaagcaagtcttcatagggaaaatgtcattgcttgtggacccgaacttg 684 Query: 341 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 400 ||||||||| |||||||||||||| | |||| | |||||||| | |||| |||||||| Sbjct: 685 ggtgatctaaccatgaccaggatgcaatttggttaaaactaagtgggggtctgaaccgac 744 Query: 401 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 460 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 745 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccaatcgaacccaaa 804 Query: 461 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 520 |||||||||||| ||||||||||| || ||||||||||||| || || |||||||||||| Sbjct: 805 gctagctggttcgccccgaaatgcatttaggcgcagcagtt-accgggcatctaggggta 863 Query: 521 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 580 ||||| ||||| |||||||| || |||||||||||||| |||||| ||| |||||||| Sbjct: 864 aagcattgttttggtgcgggtcacgagagcggtaccaaattgaggcagactatgaatact 923 Query: 581 agatatgac 589 ||||||||| Sbjct: 924 agatatgac 932
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 267 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 268 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 327 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 328 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 387 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 740 Query: 388 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 447 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 448 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 507 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 508 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 566 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 567 aaactctgaatactagatatg 587 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 167 bits (84), Expect = 5e-38 Identities = 118/128 (92%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 41 aatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgat 100 |||||| | ||||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 404 aatcccttatgaatcagcaagg-accaccttgtaaggctaaatactcctgggtgaccgat 462 Query: 101 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 160 || |||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 463 agtgaagaagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaatagaac 522 Query: 161 gtgaaacc 168 ||||||| Sbjct: 523 atgaaacc 530
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 267 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 268 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 327 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 328 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 387 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 3715 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 3774 Query: 388 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 447 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3775 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 3834 Query: 448 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 507 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 3835 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 3894 Query: 508 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 566 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 3895 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 3954 Query: 567 aaactctgaatactagatatg 587 ||||||||||||||| ||||| Sbjct: 3955 aaactctgaatactaaatatg 3975 Score = 167 bits (84), Expect = 5e-38 Identities = 118/128 (92%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 41 aatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgat 100 |||||| | ||||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 3438 aatcccttatgaatcagcaagg-accaccttgtaaggctaaatactcctgggtgaccgat 3496 Query: 101 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 160 || |||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 3497 agtgaagaagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaatagaac 3556 Query: 161 gtgaaacc 168 ||||||| Sbjct: 3557 atgaaacc 3564
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 476 bits (240), Expect = e-131 Identities = 266/271 (98%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 358 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 416 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 475 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 535 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 595 Query: 240 actcataggcagtggcttggttaagggaacg 270 ||||||||||||||||||||||||||||||| Sbjct: 596 actcataggcagtggcttggttaagggaacg 626
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 466 bits (235), Expect = e-128 Identities = 264/270 (97%), Gaps = 3/270 (1%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 318 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 376 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 435 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 495 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 496 ccaagcagtgggaggggaaattgatctctgaccgcgtgcctgttgaagaatgagccggcg 555 Query: 240 actcataggcagtggcttggttaagggaac 269 |||||||||||||||||||||||||||||| Sbjct: 556 actcataggcagtggcttggttaagggaac 585
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 458 bits (231), Expect = e-125 Identities = 257/262 (98%), Gaps = 3/262 (1%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 231 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 289 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 348 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 408 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 468 Query: 240 actcataggcagtggcttggtt 261 |||||||||||||||||||||| Sbjct: 469 actcataggcagtggcttggtt 490
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 432 bits (218), Expect = e-118 Identities = 318/348 (91%), Gaps = 10/348 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 2430 tagcatggggcacgtgg-aatcccgtgtgaatcagcaagg-accaccttgtaaggctaaa 2487 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2488 tactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccat 2547 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 2548 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcga 2604 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 2605 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 2664 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 322 || |||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 2665 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 2719 Query: 323 cttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 370 ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2720 cttatggacccgaacctgggtgatctaaccatgaccaggatgaagctt 2767
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 430 bits (217), Expect = e-117 Identities = 346/386 (89%), Gaps = 6/386 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 ||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 681 tatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaagt 740 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 800 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 |||| || |||||| |||||| ||||||||||||||||||||| |||||||| |||| || Sbjct: 801 gccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggcgcagaagtt-ac 859 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||||||||||||||||||||||||||||| |||| ||| |||| ||||||||| ||| Sbjct: 860 cagacatctaggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaattgag 919 Query: 565 gcaaactctgaatactagatatgacc 590 ||||||| |||||||||||||||||| Sbjct: 920 gcaaactatgaatactagatatgacc 945 Score = 170 bits (86), Expect = 3e-39 Identities = 148/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 ||||||||||| |||| || ||||||||| ||||||| ||||||||||||||||||||| Sbjct: 370 tagcttatgctttgactcgagtagcatgggacacgtgg-aatcccgtgtgaatcagcaag 428 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | | |||||||||||||||||||||| ||||||||| |||| |||||||||||||||||| Sbjct: 429 g-atcaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtaccgtgaggg 487 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 166 || ||||||||||||| | | |||| ||||||||||||| ||||| Sbjct: 488 aagggtgaaaagaacctctactggggagtgaaatagaacatgaaa 532
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 420 bits (212), Expect = e-114 Identities = 267/284 (94%), Gaps = 6/284 (2%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 263 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 264 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 323 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 324 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 383 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 194 Query: 384 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 254 Query: 444 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 487 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 298 Score = 155 bits (78), Expect = 2e-34 Identities = 84/86 (97%) Strand = Plus / Plus Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 565 gcaaactctgaatactagatatgacc 590 |||||||||||||||||||||||||| Sbjct: 377 gcaaactctgaatactagatatgacc 402
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 418 bits (211), Expect = e-114 Identities = 484/566 (85%), Gaps = 17/566 (3%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 361 tagcatggggcacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 418 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaaccccca 141 ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 419 tactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacccctg 478 Query: 142 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 201 | ||| ||||||| ||||| ||||||| || |||| |||||||||||||| | | Sbjct: 479 gaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtgggagg--acttt 533 Query: 202 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 261 | |||||||||||||||||||||||||||||||||||||| || | |||||||||||| Sbjct: 534 taagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggcttggtt 593 Query: 262 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga--ttgtca 319 ||||| ||| | ||| |||| ||||||||| ||||| |||||||| | | |||| Sbjct: 594 aaggg---ggattac-ccgaagccaaagcgaaagcaagtctgaatagggcaaaatcgtca 649 Query: 320 ctgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaac 379 || ||| ||||||||||| |||||||||| ||||| |||||||||||||||| | |||| Sbjct: 650 ctttttagggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaac 709 Query: 380 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 439 ||| ||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||| Sbjct: 710 caagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggt 769 Query: 440 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 499 ||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| | Sbjct: 770 gaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgg 829 Query: 500 tt---gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtacc 556 || ||| || |||||||||||||||||||||||||||||||| || || |||||| Sbjct: 830 ttggcgacgggctgtctaggggtaaagcactgtttcggtgcgggctacgaaagtggtacc 889 Query: 557 aaatcgaggcaaactctgaatactag 582 |||||| ||||||| ||||||||| Sbjct: 890 aaatcgtagcaaactaagaatactag 915
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 377 bits (190), Expect = e-101 Identities = 336/381 (88%), Gaps = 9/381 (2%) Strand = Plus / Plus Query: 207 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 266 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagga 688 Query: 267 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgct 324 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| | Sbjct: 689 ----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 745 tatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagt 804 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 805 ggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaat 864 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga- 503 |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 865 gccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgat 924 Query: 504 -ctg-gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 561 || | ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 925 gttgagctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 984 Query: 562 gaggcaaactctgaatactag 582 | ||||||| ||||||||| Sbjct: 985 gtagcaaactaagaatactag 1005 Score = 147 bits (74), Expect = 5e-32 Identities = 133/149 (89%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| |||||||||||||||| | ||| ||||||| | ||||||||| Sbjct: 452 tagcatggggcacgtg-aaatcccgtgtgaatcaacgagg-accacctcgtaaggctaaa 509 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaaccccca 141 |||||||| ||||||||||||||| ||||||||||||||||||||| |||||| ||||| Sbjct: 510 tactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcccccg 569 Query: 142 gtgggtagtgaaatagaacgtgaaaccgt 170 ||| ||||||||||||| ||||||||| Sbjct: 570 tagggaagtgaaatagaacatgaaaccgt 598
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 339 bits (171), Expect = 6e-90 Identities = 244/263 (92%), Gaps = 8/263 (3%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 242 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 300 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 359 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 360 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 416 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 417 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 474 Query: 240 actcataggcagtggcttggtta 262 ||||||||||||||||||||||| Sbjct: 475 actcataggcagtggcttggtta 497
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 337 bits (170), Expect = 2e-89 Identities = 329/379 (86%), Gaps = 6/379 (1%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 267 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 268 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 327 | | || |||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 aaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 328 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 387 ||||||||||| |||||||||| |||||||||||||||||||| | | |||| || || Sbjct: 830 ggacccgaacccgggtgatctaaccatgaccaggatgaagcttcggtaaaacggagtgga 889 Query: 388 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 447 |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 890 agtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 949 Query: 448 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac-tg 506 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || || Sbjct: 950 aatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtg 1009 Query: 507 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 565 | | ||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 1010 ggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtag 1069 Query: 566 caaactctgaatactagat 584 |||||| ||||||||||| Sbjct: 1070 caaactaagaatactagat 1088 Score = 139 bits (70), Expect = 1e-29 Identities = 132/149 (88%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| ||||||||||||||| | ||| ||||||| | ||||||||| Sbjct: 533 tagcatggggcacgtg-aaatcccgtgtgaatccacgagg-accacctcgtaaggctaaa 590 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||||||||||||||| ||| |||||||| |||||||||||||||| | |||||| Sbjct: 591 tactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaaccccag 650 Query: 143 t-gggtagtgaaatagaacgtgaaaccgt 170 | ||| ||||||||||||| ||||||||| Sbjct: 651 tcggggagtgaaatagaacatgaaaccgt 679
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 337 bits (170), Expect = 2e-89 Identities = 278/311 (89%), Gaps = 6/311 (1%) Strand = Plus / Plus Query: 278 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 335 |||||||| ||||||||||||||| |||||||| || |||||| |||||||||||| Sbjct: 632 ccggagccaaagcgaaagcgagtctgaatagggcacttttgtcactttttatggacccga 691 Query: 336 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 395 ||| |||||||||| |||||||||||||||||||||| | |||| ||| |||||||||| Sbjct: 692 acccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaa 751 Query: 396 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 455 ||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 752 ccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaac 811 Query: 456 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-at 511 | ||||||||||||||||||||||||||||||||||||||| |||||| ||| | || Sbjct: 812 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctat 871 Query: 512 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 571 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 872 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaact 931 Query: 572 ctgaatactag 582 ||||||||| Sbjct: 932 aagaatactag 942 Score = 115 bits (58), Expect = 2e-22 Identities = 129/149 (86%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||| |||||| |||||||||||||||| | ||| ||||||| | ||||||||| Sbjct: 383 tagcatgggacacgtg-aaatcccgtgtgaatcaacgagg-accacctcgtaaggctaaa 440 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaaccccca 141 |||||||| |||||| |||||||| |||||||| |||||||||||| ||||||||||| Sbjct: 441 tactcctgagtgaccaatagcgaaatagtaccgcgagggaaaggtgaaaaagaacccctg 500 Query: 142 gtgggtagtgaaatagaacgtgaaaccgt 170 ||| ||||||| ||||| ||||||||| Sbjct: 501 taggggagtgaaaaagaacatgaaaccgt 529 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 265 ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 566 tgaccgcgttcctgttgaagaatgagccggcgacttatagaaagtggcttggttaagg 623
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 113 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 172 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 173 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 232 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 233 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 107875
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 329 bits (166), Expect = 6e-87 Identities = 471/562 (83%), Gaps = 12/562 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 2143 tagcatggggcacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 2200 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 || ||||| |||||||||| ||| ||||||| || |||||||||||||||||| | Sbjct: 2201 tattcctgaatgaccgatagtgaaacagtaccgcgatttaaaggtgaaaagaaccccggg 2260 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| ||||||||| |||| |||||||||||||| | | Sbjct: 2261 aggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggacgactta 2317 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 | ||||||| ||||| ||||||||||||||||||||||| || |||||||| ||||| Sbjct: 2318 acgtctgacctcgtgcatgttgaagaatgagccggcgacttgtatgcagtggca-ggtta 2376 Query: 263 agg-gaacggaacccaccggagccgtagcgaaagcgagtcttaatagg-gcgattgtcac 320 ||| | | ||| ||||||||| ||| ||||||||| ||| ||| | ||| | ||||| Sbjct: 2377 aggcgtaaagaat--accggagccatagtgaaagcgag-cttgataagagcgttcgtcac 2433 Query: 321 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 380 || ||| |||||||||| || ||||||| |||| ||||| |||||||| | | | ||| Sbjct: 2434 tgtttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggtaacact 2493 Query: 381 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 440 ||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 2494 aagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtg 2553 Query: 441 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 500 |||||||| ||||| || ||||||||||||||||||||||||||||| |||||||| || Sbjct: 2554 aaatgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcggt 2613 Query: 501 tgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 559 ||| | | | ||||||||||||||||||||||| ||||||| | |||||||||||| Sbjct: 2614 tgatgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggtaccaaa 2673 Query: 560 tcgaggcaaactctgaatacta 581 |||||||||||||||||||||| Sbjct: 2674 tcgaggcaaactctgaatacta 2695
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 327 bits (165), Expect = 2e-86 Identities = 277/313 (88%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 277 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 336 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 337 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 396 || |||||||||||||||| ||||||||||| |||| |||||| || ||||||||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaac 711 Query: 397 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 456 |||||| ||||||| || || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 712 cgactggtgttgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaact 771 Query: 457 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctag 515 | ||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||| Sbjct: 772 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttag 831 Query: 516 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 575 |||||||||||||||||||||||||||| | | ||||||||||| || ||||||||||| Sbjct: 832 gggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctga 891 Query: 576 atactagatatga 588 |||||| |||||| Sbjct: 892 atactaaatatga 904 Score = 224 bits (113), Expect = 3e-55 Identities = 194/219 (88%), Gaps = 4/219 (1%) Strand = Plus / Plus Query: 47 gtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 106 |||||||||||| ||| ||||||| | ||||||||||||||||||||||||||||| ||| Sbjct: 373 gtgtgaatcagcgagg-accacctcgtaaggctaaatactcctgggtgaccgatagtgaa 431 Query: 107 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 166 ||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| Sbjct: 432 gtagtaccgtgagggaaaggtgaaaagaacccccactggggagtgaaatagataatgaaa 491 Query: 167 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 226 ||| | ||| |||||||||||||| || | || ||||||||||||||||||||| Sbjct: 492 ccg---taagcctacaagcagtgggaggaaaatataatttctgaccgcgtgcctgttgaa 548 Query: 227 gaatgagccggcgactcataggcagtggcttggttaagg 265 |||||||||||||||| |||||||||||| ||||||||| Sbjct: 549 gaatgagccggcgacttataggcagtggcctggttaagg 587
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 325 bits (164), Expect = 9e-86 Identities = 240/260 (92%), Gaps = 8/260 (3%) Strand = Plus / Minus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 253 actagcttatgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 195 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 agg-accgccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 136 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 135 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 79 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 78 ccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcg 21 Query: 240 actcataggcagtggcttgg 259 |||||||||||||||||||| Sbjct: 20 actcataggcagtggcttgg 1
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 323 bits (163), Expect = 4e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Minus Query: 206 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 265 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 114870 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 114812 Query: 266 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 324 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 114811 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 114754 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 114753 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 114694 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 114693 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 114634 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 114633 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 114574 Query: 505 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 563 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 114573 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 114514 Query: 564 ggcaaactctgaatacta 581 |||||||||||||||||| Sbjct: 114513 ggcaaactctgaatacta 114496 Score = 323 bits (163), Expect = 4e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Plus Query: 206 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 265 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 2647 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 2705 Query: 266 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 324 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 2706 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 2763 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 2764 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 2823 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 2824 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 2883 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 2884 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 2943 Query: 505 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 563 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2944 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 3003 Query: 564 ggcaaactctgaatacta 581 |||||||||||||||||| Sbjct: 3004 ggcaaactctgaatacta 3021 Score = 115 bits (58), Expect = 2e-22 Identities = 129/149 (86%), Gaps = 3/149 (2%) Strand = Plus / Minus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| ||||||||||||||| || ||| ||||||| | ||||||||| Sbjct: 115047 tagcatggggcacgtg-aaatcccgtgtgaatctgcgagg-accacctcgtaaggctaaa 114990 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 || ||||| |||||||||||| | ||||||||||||||||||||||||||||||| | Sbjct: 114989 tattcctgaatgaccgatagcgcaacagtaccgtgagggaaaggtgaaaagaaccccggg 114930 Query: 143 t-gggtagtgaaatagaacgtgaaaccgt 170 ||| |||||||||||| ||||||||| Sbjct: 114929 caggggagtgaaatagaatatgaaaccgt 114901 Score = 115 bits (58), Expect = 2e-22 Identities = 129/149 (86%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| ||||||||||||||| || ||| ||||||| | ||||||||| Sbjct: 2470 tagcatggggcacgtg-aaatcccgtgtgaatctgcgagg-accacctcgtaaggctaaa 2527 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 || ||||| |||||||||||| | ||||||||||||||||||||||||||||||| | Sbjct: 2528 tattcctgaatgaccgatagcgcaacagtaccgtgagggaaaggtgaaaagaaccccggg 2587 Query: 143 t-gggtagtgaaatagaacgtgaaaccgt 170 ||| |||||||||||| ||||||||| Sbjct: 2588 caggggagtgaaatagaatatgaaaccgt 2616
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 321 bits (162), Expect = 1e-84 Identities = 239/259 (92%), Gaps = 7/259 (2%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 26 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 84 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 143 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 144 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 200 Query: 180 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 239 ||||||||||||||||| | | ||||||||||||||||||||||||||||||||||| Sbjct: 201 ccaagcagtgggaggggcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcg 259 Query: 240 actcataggcagtggcttg 258 ||||||||||||||||||| Sbjct: 260 actcataggcagtggcttg 278
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 317 bits (160), Expect = 2e-83 Identities = 322/371 (86%), Gaps = 5/371 (1%) Strand = Plus / Plus Query: 213 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 272 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| || | Sbjct: 2385 gcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaaggtaatg-- 2441 Query: 273 acccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggac 331 | || |||||| |||||||||||||| ||||||| ||| || |||||| |||| ||| Sbjct: 2442 atttactggagccatagcgaaagcgagttttaatagagcgtttagtcactatttatagac 2501 Query: 332 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 391 ||||||| |||||||||| ||||| ||||| |||||||| | | ||||||| |||| | Sbjct: 2502 ccgaacccgggtgatctaaccatggccagggtgaagcttaggtaaaactaaatggaggcc 2561 Query: 392 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 451 |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| || Sbjct: 2562 cgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatc 2621 Query: 452 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggaca 510 |||||| ||||||||||||||||||||||||||||||||||||||| ||||| | | Sbjct: 2622 gaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttataa 2681 Query: 511 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 570 | |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 2682 tttaggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaac 2741 Query: 571 tctgaatacta 581 ||||||||||| Sbjct: 2742 tctgaatacta 2752 Score = 109 bits (55), Expect = 1e-20 Identities = 98/110 (89%), Gaps = 2/110 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 2198 tagcatggggcacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 2255 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 132 || ||||| |||||||||||| | |||||||||||||||||||||||| Sbjct: 2256 tattcctgaatgaccgatagcgtaacagtaccgtgagggaaaggtgaaaa 2305
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 315 bits (159), Expect = 9e-83 Identities = 174/179 (97%) Strand = Plus / Plus Query: 270 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 329 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 330 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 389 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 390 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 448 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 386 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 445 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 446 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 505 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 506 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 565 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 566 caaactctgaatactagatat 586 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 313 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 372 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 373 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 432 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 433 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 492 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 493 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 549 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 550 cggtaccaaatcgaggcaaactctgaatactaga 583 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 131 bits (66), Expect = 3e-27 Identities = 131/149 (87%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 496 tagcatggggcacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 553 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaaccccca 141 |||| ||| |||||||||| ||| ||||||||||||||||||||| ||||||||||| Sbjct: 554 tacttttggatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaaagaacccctg 613 Query: 142 gtgggtagtgaaatagaacgtgaaaccgt 170 ||| ||||||||||||| ||||||||| Sbjct: 614 taggggagtgaaatagaacatgaaaccgt 642 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 265 ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| Sbjct: 693 tgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaagg 750
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 305 bits (154), Expect = 9e-80 Identities = 399/474 (84%), Gaps = 15/474 (3%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 377 tagcatggggcacgtgg-aatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 434 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||||| | Sbjct: 435 tactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaacccccgg 494 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| | Sbjct: 495 aggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaagaag 549 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 || ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 550 at-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggtta 608 Query: 263 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc---gattgtca 319 ||| | | | |||||||| |||||||||||||||| |||||||| || |||| Sbjct: 609 aggaa----attcatccggagccatagcgaaagcgagtctgaatagggcattaatggtca 664 Query: 320 ctgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaac 379 || |||||||||||||||| || ||||||||||||| |||| |||||| | | | |||| Sbjct: 665 cttcttatggacccgaaccgggatgatctatccatggccagattgaagcgttggtaaaac 724 Query: 380 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 439 | | ||| ||||||||| ||||||||| |||| ||||||||||||||| ||| || Sbjct: 725 ttcgtgaaggatcgaaccgaccgatgttgaaaaatcggcggatgagttgtggatagcgga 784 Query: 440 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 493 ||||| || ||||| || ||||||||||| |||| ||||||| ||||||||| Sbjct: 785 gaaattcctatcgaatcccgagctagctggatctctccgaaatttgttgaggcg 838 Score = 52.0 bits (26), Expect = 0.002 Identities = 57/66 (86%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 515 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 573 |||||||||| || |||||||||||||||||| ||||||||||| ||| | | ||||| Sbjct: 862 ggggtaaagctaccgtttcggtgcgggctgcgaaagcggtaccaagtcgtgacgaactca 921 Query: 574 gaatac 579 |||||| Sbjct: 922 gaatac 927
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 301 bits (152), Expect = 1e-78 Identities = 210/228 (92%), Gaps = 1/228 (0%) Strand = Plus / Minus Query: 358 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 417 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 418 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 477 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 478 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 537 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 538 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 585 |||| | |||| ||||||||| ||||||||||||||||| |||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagata 2885 Score = 157 bits (79), Expect = 5e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Minus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 325 tatggacccgaacct 339 ||||||||||||||| Sbjct: 3134 tatggacccgaacct 3120 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 85 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 144 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 145 ggtagtgaaatagaacgtgaaacc 168 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/76 (92%), Gaps = 3/76 (3%) Strand = Plus / Minus Query: 2 ctagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaa 60 |||||||| ||||||||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 3451 ctagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaattagcaa 3393 Query: 61 ggnaccaccttgcaag 76 || ||||||||||||| Sbjct: 3392 gg-accaccttgcaag 3378
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 301 bits (152), Expect = 1e-78 Identities = 329/385 (85%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 565 gcaaactctgaatactagatatgac 589 ||||||| |||||| |||||||||| Sbjct: 896 gcaaactatgaatattagatatgac 920 Score = 165 bits (83), Expect = 2e-37 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 ||||||||||| ||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 347 tagcttatgctttgacccgagtagcatgggacacg-gagaatcccgtgtgaatcagcaag 405 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | ||||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||| Sbjct: 406 g-accaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtgaggg 464 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 166 || |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 465 aagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 301 bits (152), Expect = 1e-78 Identities = 329/385 (85%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 565 gcaaactctgaatactagatatgac 589 ||||||| |||||| |||||||||| Sbjct: 896 gcaaactatgaatattagatatgac 920 Score = 165 bits (83), Expect = 2e-37 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 ||||||||||| ||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 347 tagcttatgctttgacccgagtagcatgggacacg-gagaatcccgtgtgaatcagcaag 405 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | ||||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||| Sbjct: 406 g-accaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtgaggg 464 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 166 || |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 465 aagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 301 bits (152), Expect = 1e-78 Identities = 329/385 (85%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 565 gcaaactctgaatactagatatgac 589 ||||||| |||||| |||||||||| Sbjct: 896 gcaaactatgaatattagatatgac 920 Score = 165 bits (83), Expect = 2e-37 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 ||||||||||| ||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 347 tagcttatgctttgacccgagtagcatgggacacg-gagaatcccgtgtgaatcagcaag 405 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | ||||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||| Sbjct: 406 g-accaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtgaggg 464 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 166 || |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 465 aagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 301 bits (152), Expect = 1e-78 Identities = 329/385 (85%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 565 gcaaactctgaatactagatatgac 589 ||||||| |||||| |||||||||| Sbjct: 896 gcaaactatgaatattagatatgac 920 Score = 157 bits (79), Expect = 5e-35 Identities = 146/165 (88%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 ||||||||||| ||||||| ||||||||| |||| | |||||| |||||||||||||| Sbjct: 347 tagcttatgctttgacccgagtagcatgggacacg-gagaatcccatgtgaatcagcaag 405 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | ||||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||| Sbjct: 406 g-accaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtgaggg 464 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 166 || |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 465 aagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 301 bits (152), Expect = 1e-78 Identities = 329/385 (85%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 565 gcaaactctgaatactagatatgac 589 ||||||| |||||| |||||||||| Sbjct: 896 gcaaactatgaatattagatatgac 920 Score = 165 bits (83), Expect = 2e-37 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 ||||||||||| ||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 347 tagcttatgctttgacccgagtagcatgggacacg-gagaatcccgtgtgaatcagcaag 405 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | ||||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||| Sbjct: 406 g-accaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtgaggg 464 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 166 || |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 465 aagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 301 bits (152), Expect = 1e-78 Identities = 329/385 (85%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 565 gcaaactctgaatactagatatgac 589 ||||||| |||||| |||||||||| Sbjct: 895 gcaaactatgaatattagatatgac 919 Score = 165 bits (83), Expect = 2e-37 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 ||||||||||| ||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 346 tagcttatgctttgacccgagtagcatgggacacg-gagaatcccgtgtgaatcagcaag 404 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | ||||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||| Sbjct: 405 g-accaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtgaggg 463 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 166 || |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 464 aagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 508
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 301 bits (152), Expect = 1e-78 Identities = 329/385 (85%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 565 gcaaactctgaatactagatatgac 589 ||||||| |||||| |||||||||| Sbjct: 896 gcaaactatgaatattagatatgac 920 Score = 165 bits (83), Expect = 2e-37 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 ||||||||||| ||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 347 tagcttatgctttgacccgagtagcatgggacacg-gagaatcccgtgtgaatcagcaag 405 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | ||||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||| Sbjct: 406 g-accaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtgaggg 464 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 166 || |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 465 aagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 301 bits (152), Expect = 1e-78 Identities = 329/385 (85%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 565 gcaaactctgaatactagatatgac 589 ||||||| |||||| |||||||||| Sbjct: 896 gcaaactatgaatattagatatgac 920 Score = 165 bits (83), Expect = 2e-37 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 ||||||||||| ||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 347 tagcttatgctttgacccgagtagcatgggacacg-gagaatcccgtgtgaatcagcaag 405 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | ||||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||| Sbjct: 406 g-accaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtgaggg 464 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 166 || |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 465 aagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 301 bits (152), Expect = 1e-78 Identities = 329/385 (85%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 565 gcaaactctgaatactagatatgac 589 ||||||| |||||| |||||||||| Sbjct: 896 gcaaactatgaatattagatatgac 920 Score = 165 bits (83), Expect = 2e-37 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 ||||||||||| ||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 347 tagcttatgctttgacccgagtagcatgggacacg-gagaatcccgtgtgaatcagcaag 405 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | ||||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||| Sbjct: 406 g-accaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtgaggg 464 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 166 || |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 465 aagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 301 bits (152), Expect = 1e-78 Identities = 329/385 (85%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 565 gcaaactctgaatactagatatgac 589 ||||||| |||||| |||||||||| Sbjct: 896 gcaaactatgaatattagatatgac 920 Score = 165 bits (83), Expect = 2e-37 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 ||||||||||| ||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 347 tagcttatgctttgacccgagtagcatgggacacg-gagaatcccgtgtgaatcagcaag 405 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | ||||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||| Sbjct: 406 g-accaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtgaggg 464 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 166 || |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 465 aagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 301 bits (152), Expect = 1e-78 Identities = 329/385 (85%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 565 gcaaactctgaatactagatatgac 589 ||||||| |||||| |||||||||| Sbjct: 896 gcaaactatgaatattagatatgac 920 Score = 165 bits (83), Expect = 2e-37 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 ||||||||||| ||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 347 tagcttatgctttgacccgagtagcatgggacacg-gagaatcccgtgtgaatcagcaag 405 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | ||||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||| Sbjct: 406 g-accaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtgaggg 464 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 166 || |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 465 aagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 329 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 388 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 389 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 448 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 449 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 507 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 508 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 566 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 567 aaactctgaatactagatatgac 589 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 101 bits (51), Expect = 3e-18 Identities = 88/99 (88%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 41 aatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgat 100 |||||||| |||||| || ||| ||||||| | |||||||||||||||| | |||||||| Sbjct: 6074 aatcccgtatgaatccgcgagg-accacctcgtaaggctaaatactcctagatgaccgat 6132 Query: 101 agcgaagtagtaccgtgagggaaaggtgaaaagaacccc 139 || ||| |||||||||||||||| ||||||||||||||| Sbjct: 6133 agtgaaatagtaccgtgagggaatggtgaaaagaacccc 6171 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 207 ctgaccgcgtgcctgttgaagaatgagccggcgact 242 |||||||| ||||||||||||||||||||||||||| Sbjct: 6234 ctgaccgcatgcctgttgaagaatgagccggcgact 6269 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 282 agccgtagcgaaagcgagtcttaatagggcgat 314 ||||||||| ||||||||||| ||||||||||| Sbjct: 6304 agccgtagcaaaagcgagtctgaatagggcgat 6336
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 329 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 388 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 389 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 448 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 449 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 507 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 508 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 566 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 567 aaactctgaatactagatatgac 589 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 101 bits (51), Expect = 3e-18 Identities = 88/99 (88%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 41 aatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgat 100 |||||||| |||||| || ||| ||||||| | |||||||||||||||| | |||||||| Sbjct: 3137 aatcccgtatgaatccgcgagg-accacctcgtaaggctaaatactcctagatgaccgat 3195 Query: 101 agcgaagtagtaccgtgagggaaaggtgaaaagaacccc 139 || ||| |||||||||||||||| ||||||||||||||| Sbjct: 3196 agtgaaatagtaccgtgagggaatggtgaaaagaacccc 3234 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 207 ctgaccgcgtgcctgttgaagaatgagccggcgact 242 |||||||| ||||||||||||||||||||||||||| Sbjct: 3297 ctgaccgcatgcctgttgaagaatgagccggcgact 3332 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 282 agccgtagcgaaagcgagtcttaatagggcgat 314 ||||||||| ||||||||||| ||||||||||| Sbjct: 3367 agccgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 329 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 388 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 389 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 448 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 449 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 507 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 508 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 566 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 567 aaactctgaatactagatatgac 589 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 101 bits (51), Expect = 3e-18 Identities = 88/99 (88%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 41 aatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgat 100 |||||||| |||||| || ||| ||||||| | |||||||||||||||| | |||||||| Sbjct: 425 aatcccgtatgaatccgcgagg-accacctcgtaaggctaaatactcctagatgaccgat 483 Query: 101 agcgaagtagtaccgtgagggaaaggtgaaaagaacccc 139 || ||| |||||||||||||||| ||||||||||||||| Sbjct: 484 agtgaaatagtaccgtgagggaatggtgaaaagaacccc 522 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 207 ctgaccgcgtgcctgttgaagaatgagccggcgact 242 |||||||| ||||||||||||||||||||||||||| Sbjct: 585 ctgaccgcatgcctgttgaagaatgagccggcgact 620 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 282 agccgtagcgaaagcgagtcttaatagggcgat 314 ||||||||| ||||||||||| ||||||||||| Sbjct: 655 agccgtagcaaaagcgagtctgaatagggcgat 687
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 295 bits (149), Expect = 8e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 267 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 192429 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 192488 Query: 268 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 327 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 192489 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 192543 Query: 328 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 387 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 192544 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 192603 Query: 388 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 447 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 192604 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 192663 Query: 448 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 505 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 192664 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 192723 Query: 506 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 192724 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 192783 Query: 565 gcaaactctgaatacta 581 ||||||| |||||||| Sbjct: 192784 gcaaactaagaatacta 192800 Score = 295 bits (149), Expect = 8e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Minus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 267 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 144353 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 144294 Query: 268 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 327 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 144293 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 144239 Query: 328 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 387 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 144238 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 144179 Query: 388 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 447 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 144178 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 144119 Query: 448 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 505 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 144118 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 144059 Query: 506 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 144058 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 143999 Query: 565 gcaaactctgaatacta 581 ||||||| |||||||| Sbjct: 143998 gcaaactaagaatacta 143982 Score = 133 bits (67), Expect = 7e-28 Identities = 134/150 (89%), Gaps = 5/150 (3%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||| |||||| ||||||||||||||| || ||| ||||||| | ||||||||| Sbjct: 192256 tagcatgggacacgtg-aaatcccgtgtgaatctgcgagg-accacctcgtaaggctaaa 192313 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaaccccca 141 |||||||| |||||||||| |||||||||||||||||||||||||||| |||| ||||| Sbjct: 192314 tactcctgaatgaccgatagtgaagtagtaccgtgagggaaaggtgaaacagaa-cccca 192372 Query: 142 gt-gggtagtgaaatagaacgtgaaaccgt 170 || ||| ||||||||||||| ||||||||| Sbjct: 192373 gtcggggagtgaaatagaacatgaaaccgt 192402 Score = 133 bits (67), Expect = 7e-28 Identities = 134/150 (89%), Gaps = 5/150 (3%) Strand = Plus / Minus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||| |||||| ||||||||||||||| || ||| ||||||| | ||||||||| Sbjct: 144526 tagcatgggacacgtg-aaatcccgtgtgaatctgcgagg-accacctcgtaaggctaaa 144469 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaaccccca 141 |||||||| |||||||||| |||||||||||||||||||||||||||| |||| ||||| Sbjct: 144468 tactcctgaatgaccgatagtgaagtagtaccgtgagggaaaggtgaaacagaa-cccca 144410 Query: 142 gt-gggtagtgaaatagaacgtgaaaccgt 170 || ||| ||||||||||||| ||||||||| Sbjct: 144409 gtcggggagtgaaatagaacatgaaaccgt 144380
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 293 bits (148), Expect = 3e-76 Identities = 328/385 (85%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 565 gcaaactctgaatactagatatgac 589 ||||||| |||||| |||||||||| Sbjct: 895 gcaaactatgaatattagatatgac 919 Score = 165 bits (83), Expect = 2e-37 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 ||||||||||| ||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 346 tagcttatgctttgacccgagtagcatgggacacg-gagaatcccgtgtgaatcagcaag 404 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | ||||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||| Sbjct: 405 g-accaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtgaggg 463 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 166 || |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 464 aagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 508
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 293 bits (148), Expect = 3e-76 Identities = 329/385 (85%), Gaps = 7/385 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gtt-ac 834 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 565 gcaaactctgaatactagatatgac 589 ||||||| |||||| |||||||||| Sbjct: 895 gcaaactatgaatattagatatgac 919 Score = 165 bits (83), Expect = 2e-37 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 ||||||||||| ||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 347 tagcttatgctttgacccgagtagcatgggacacg-gagaatcccgtgtgaatcagcaag 405 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | ||||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||| Sbjct: 406 g-accaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtgaggg 464 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 166 || |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 465 aagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 293 bits (148), Expect = 3e-76 Identities = 328/385 (85%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 | || ||||||||| |||||||||||||||||||||||||||| ||||| || ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgtt-ac 835 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 565 gcaaactctgaatactagatatgac 589 ||||||| |||||| |||||||||| Sbjct: 896 gcaaactatgaatattagatatgac 920 Score = 165 bits (83), Expect = 2e-37 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 ||||||||||| ||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 347 tagcttatgctttgacccgagtagcatgggacacg-gagaatcccgtgtgaatcagcaag 405 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | ||||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||| Sbjct: 406 g-accaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtgaggg 464 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 166 || |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 465 aagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 289 bits (146), Expect = 5e-75 Identities = 263/302 (87%) Strand = Plus / Plus Query: 279 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 338 ||||||| |||||||||||||||| | |||||| | |||||| |||| |||||||||| Sbjct: 2189 cggagccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacc 2248 Query: 339 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 398 || ||||||| |||| |||||||||||||| | | | ||| || ||||||||||||| Sbjct: 2249 cggatgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccg 2308 Query: 399 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 458 |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 2309 actgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccg 2368 Query: 459 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 518 ||||||||||||||||||||||||||||||||||||||| ||| | | | | |||| Sbjct: 2369 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttggggg 2428 Query: 519 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 578 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 2429 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaata 2488 Query: 579 ct 580 || Sbjct: 2489 ct 2490 Score = 105 bits (53), Expect = 2e-19 Identities = 108/125 (86%), Gaps = 1/125 (0%) Strand = Plus / Plus Query: 44 cccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgatagc 103 ||||| ||||||||| ||| ||||||| | ||||||||||| |||| | | |||||||| Sbjct: 1963 cccgtatgaatcagcgagg-accacctcgtaaggctaaatattcctagataaccgatagt 2021 Query: 104 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 163 ||| ||||||||||||||||||||||||||||||| | ||| ||||||||||||| || Sbjct: 2022 gaaacagtaccgtgagggaaaggtgaaaagaaccccgtgaggggagtgaaatagaacatg 2081 Query: 164 aaacc 168 ||||| Sbjct: 2082 aaacc 2086 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 206 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 ||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2121 tctgacctcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2170
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 316 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 375 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 376 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 435 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 436 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 495 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 496 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 552 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 553 taccaaatcgaggcaaactctgaatactaga 583 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950 Score = 125 bits (63), Expect = 2e-25 Identities = 100/110 (90%), Gaps = 2/110 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 393 tagcatggggcacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 450 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 132 |||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 451 tacttttggatgaccgatagcgaaatagtaccgtgagggaaaggtgaaaa 500 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 207 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 263 |||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 571 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaa 627
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 285 bits (144), Expect = 8e-74 Identities = 327/385 (84%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 265 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 324 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 325 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 384 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 385 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 444 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 445 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 504 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | | Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg-tatc 835 Query: 505 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 565 gcaaactctgaatactagatatgac 589 ||||||| |||||| |||||||||| Sbjct: 896 gcaaactatgaatattagatatgac 920 Score = 165 bits (83), Expect = 2e-37 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 ||||||||||| ||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 347 tagcttatgctttgacccgagtagcatgggacacg-gagaatcccgtgtgaatcagcaag 405 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | ||||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||| Sbjct: 406 g-accaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtgaggg 464 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 166 || |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 465 aagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 285 bits (144), Expect = 8e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 278 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 335 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 336 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 395 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 681 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 740 Query: 396 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 455 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 741 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 800 Query: 456 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 514 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 801 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 860 Query: 515 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 574 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 861 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 920 Query: 575 aatactagata 585 ||||||||||| Sbjct: 921 aatactagata 931 Score = 157 bits (79), Expect = 5e-35 Identities = 131/146 (89%), Gaps = 2/146 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||| |||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 377 tagcatgggacacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 434 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 435 tactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaacccctgt 494 Query: 143 tgggtagtgaaatagaacgtgaaacc 168 ||| ||||||||||||| ||||||| Sbjct: 495 aggggagtgaaatagaacatgaaacc 520 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 207 ctgaccgcgtgcctgttgaagaatgagccggcgact 242 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 285 bits (144), Expect = 8e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 278 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 335 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 336 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 395 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 25490 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 25549 Query: 396 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 455 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 25550 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 25609 Query: 456 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 514 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 25610 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 25669 Query: 515 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 574 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 25670 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 25729 Query: 575 aatactagata 585 ||||||||||| Sbjct: 25730 aatactagata 25740 Score = 157 bits (79), Expect = 5e-35 Identities = 131/146 (89%), Gaps = 2/146 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||| |||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 25186 tagcatgggacacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 25243 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 25244 tactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaacccctgt 25303 Query: 143 tgggtagtgaaatagaacgtgaaacc 168 ||| ||||||||||||| ||||||| Sbjct: 25304 aggggagtgaaatagaacatgaaacc 25329 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 207 ctgaccgcgtgcctgttgaagaatgagccggcgact 242 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 283 bits (143), Expect = 3e-73 Identities = 264/303 (87%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 278 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 337 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 338 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 397 | |||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 398 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 457 ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaaccc 428 Query: 458 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag-g 516 ||||||||||||||||||||||||| ||| ||||||||| || | |||||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaacgattaaatctaggg 488 Query: 517 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 576 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| Sbjct: 489 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaa 548 Query: 577 tac 579 ||| Sbjct: 549 tac 551 Score = 161 bits (81), Expect = 3e-36 Identities = 133/148 (89%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| |||||||||||||||| | ||| ||||||| | ||||||||| Sbjct: 4 tagcatggggcacgtg-aaatcccgtgtgaatcatcgagg-accacctcgaaaggctaaa 61 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| | Sbjct: 62 tactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccggg 121 Query: 143 tgggtagtgaaatagaacgtgaaaccgt 170 ||| ||||||||||||| ||||||||| Sbjct: 122 aggggagtgaaatagaacatgaaaccgt 149 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 215 gtgcctgttgaagaatgagccggcgactcatagg 248 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 282 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 341 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 636 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 694 Query: 342 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 401 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 695 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 754 Query: 402 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 461 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 755 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 814 Query: 462 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 518 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 519 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 578 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 934 Query: 579 ctaga 583 ||||| Sbjct: 935 ctaga 939 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 263 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 618 Score = 101 bits (51), Expect = 3e-18 Identities = 113/131 (86%), Gaps = 2/131 (1%) Strand = Plus / Plus Query: 41 aatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgat 100 ||||||| |||||||||| ||| ||||||| | |||||||||||||||| ||||||||| Sbjct: 392 aatcccgggtgaatcagcgagg-accacctcgtaaggctaaatactcctaagtgaccgat 450 Query: 101 agcgaagtagtaccgtgagggaaaggtgaaa-agaacccccagtgggtagtgaaatagaa 159 || ||| ||||||| ||||||||||||||| |||||||| ||| |||||||||||| Sbjct: 451 agtgaacaagtaccgcgagggaaaggtgaaatagaacccctgaaggggagtgaaatagaa 510 Query: 160 cgtgaaaccgt 170 | ||||||||| Sbjct: 511 catgaaaccgt 521
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 283 bits (143), Expect = 3e-73 Identities = 260/297 (87%), Gaps = 4/297 (1%) Strand = Plus / Plus Query: 288 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 346 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 347 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 406 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 407 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 466 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 467 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 523 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 524 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 580 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 131 bits (66), Expect = 3e-27 Identities = 131/149 (87%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| ||||||||||||||| || ||| ||||||| | ||||||||| Sbjct: 364 tagcatggggcacgtg-aaatcccgtgtgaatctgcgagg-accacctcgtaaggctaaa 421 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaaccccca 141 |||||||| || |||||||| |||||||||||| |||||||||||| ||||||||||| Sbjct: 422 tactcctgagtcaccgatagtgaagtagtaccgcgagggaaaggtgaaaaagaacccctg 481 Query: 142 gtgggtagtgaaatagaacgtgaaaccgt 170 ||| ||||||||||||| ||||||||| Sbjct: 482 caggggagtgaaatagaacatgaaaccgt 510 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 248 ||||||||| ||||||||||||||| ||||||||| ||||| Sbjct: 543 tgaccgcgttcctgttgaagaatgaaccggcgacttatagg 583
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 282 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 341 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 2518 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 2576 Query: 342 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 401 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 2577 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 2636 Query: 402 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 461 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 2637 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 2696 Query: 462 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 518 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 519 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 578 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 2816 Query: 579 ctaga 583 ||||| Sbjct: 2817 ctaga 2821 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 263 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2442 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 2500 Score = 101 bits (51), Expect = 3e-18 Identities = 113/131 (86%), Gaps = 2/131 (1%) Strand = Plus / Plus Query: 41 aatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgat 100 ||||||| |||||||||| ||| ||||||| | |||||||||||||||| ||||||||| Sbjct: 2273 aatcccgggtgaatcagcgagg-accacctcgtaaggctaaatactcctaagtgaccgat 2331 Query: 101 agcgaagtagtaccgtgagggaaaggtgaaa-agaacccccagtgggtagtgaaatagaa 159 || ||| ||||||| ||||||||||||||| |||||||| ||| |||||||||||| Sbjct: 2332 agtgaacaagtaccgcgagggaaaggtgaaatagaacccctgaaggggagtgaaatagaa 2391 Query: 160 cgtgaaaccgt 170 | ||||||||| Sbjct: 2392 catgaaaccgt 2402
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 291 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 350 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 351 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 410 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 411 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 470 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 471 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 529 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 530 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 291 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 350 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 351 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 410 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 411 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 470 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 471 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 529 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 530 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 137 bits (69), Expect = 5e-29 Identities = 130/148 (87%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 189308 tagcatggggcacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 189365 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 || | ||| |||||||||| ||| |||||||||||||||||||||||||||||||| | Sbjct: 189366 tattactgaatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaaccccggg 189425 Query: 143 tgggtagtgaaatagaacgtgaaaccgt 170 ||| ||||||||||||| |||| |||| Sbjct: 189426 aggggagtgaaatagaacatgaacccgt 189453 Score = 137 bits (69), Expect = 5e-29 Identities = 130/148 (87%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 150735 tagcatggggcacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 150792 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 || | ||| |||||||||| ||| |||||||||||||||||||||||||||||||| | Sbjct: 150793 tattactgaatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaaccccggg 150852 Query: 143 tgggtagtgaaatagaacgtgaaaccgt 170 ||| ||||||||||||| |||| |||| Sbjct: 150853 aggggagtgaaatagaacatgaacccgt 150880 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 214 cgtgcctgttgaagaatgagccggcgactcatag 247 ||||| ||||||||||||||||||||||| |||| Sbjct: 189494 cgtgcatgttgaagaatgagccggcgacttatag 189527 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 214 cgtgcctgttgaagaatgagccggcgactcatag 247 ||||| ||||||||||||||||||||||| |||| Sbjct: 150921 cgtgcatgttgaagaatgagccggcgacttatag 150954
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 280 bits (141), Expect = 5e-72 Identities = 238/269 (88%), Gaps = 1/269 (0%) Strand = Plus / Plus Query: 321 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 380 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 381 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 440 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 441 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 500 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 501 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 560 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 561 cgaggcaaactctgaatactagatatgac 589 |||||||||| |||||| |||||||||| Sbjct: 892 tgaggcaaactatgaatattagatatgac 920 Score = 165 bits (83), Expect = 2e-37 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 3 tagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagcaag 61 ||||||||||| ||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 347 tagcttatgctttgacccgagtagcatgggacacg-gagaatcccgtgtgaatcagcaag 405 Query: 62 gnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 121 | ||||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||| Sbjct: 406 g-accaccttgcaaggctagatactcttgggtgaccaatagtgaagtagtaccgtgaggg 464 Query: 122 aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 166 || |||||||||||||| | |||| ||||||||||||| ||||| Sbjct: 465 aagggtgaaaagaacccttattggggagtgaaatagaacatgaaa 509 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 205 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 264 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 265 gg 266 || Sbjct: 602 gg 603
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 280 bits (141), Expect = 5e-72 Identities = 321/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 267 ||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 598 tgaccgcatgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggca 657 Query: 268 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 327 | || || |||||| ||||||||| ||||| ||||||||| |||||||| |||| Sbjct: 658 aa--aagcc---ggagccaaagcgaaagcaagtctgaatagggcgcttgtcactttttat 712 Query: 328 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 387 ||||||||||||| |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 713 ggacccgaacctgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 772 Query: 388 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 447 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 773 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 832 Query: 448 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 505 | |||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 833 agtcgaactcagagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 892 Query: 506 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 564 || | | ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 893 gggctagttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 952 Query: 565 gcaaactctgaatacta 581 ||||||| |||||||| Sbjct: 953 gcaaactaagaatacta 969 Score = 133 bits (67), Expect = 7e-28 Identities = 134/150 (89%), Gaps = 5/150 (3%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| ||||||||||||||| || ||| ||||||| | ||||||||| Sbjct: 425 tagcatggggcacgtg-aaatcccgtgtgaatccgcgagg-accacctcgtaaggctaaa 482 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaaccccca 141 |||||||| |||||||||||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 483 tactcctgaatgaccgatagcgaaatagtaccgtgagggaaaggtgaaacagaa-cccca 541 Query: 142 gt-gggtagtgaaatagaacgtgaaaccgt 170 || ||| ||||||| ||||| ||||||||| Sbjct: 542 gtcggggagtgaaaaagaacatgaaaccgt 571
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 278 bits (140), Expect = 2e-71 Identities = 315/369 (85%), Gaps = 7/369 (1%) Strand = Plus / Plus Query: 215 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 274 |||| ||||||||||||||||||||||| ||| | |||||| |||||||| || | | Sbjct: 188572 gtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggtaaagaat- 188629 Query: 275 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 334 |||| |||| || ||||||||| | ||||| ||| | |||||| |||| |||||| Sbjct: 188630 --accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttatagacccg 188687 Query: 335 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 394 |||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||||||||| Sbjct: 188688 aacccggatgatctagccatggccagggtgaagcttaggtaacactaagtggaggtccga 188747 Query: 395 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 454 ||||||| |||||||| ||| |||||||||||||||| |||||||||||||||| ||||| Sbjct: 188748 accgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgccaatcgaa 188807 Query: 455 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctggacatc 512 || ||||||||||||||||||||||||| ||||||||||||| ||||| || | | Sbjct: 188808 tccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct-taaact 188866 Query: 513 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 572 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 188867 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 188926 Query: 573 tgaatacta 581 ||||||||| Sbjct: 188927 tgaatacta 188935 Score = 276 bits (139), Expect = 8e-71 Identities = 320/376 (85%), Gaps = 7/376 (1%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 267 ||||| ||||| ||||||||||||||||||||||| ||| | |||||| |||||||| | Sbjct: 150122 tgacctcgtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggta 150180 Query: 268 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 327 | | | |||| |||| || ||||||||| | ||||| ||| | |||||| |||| Sbjct: 150181 aagaat---accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttat 150237 Query: 328 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 387 |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| || Sbjct: 150238 agacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaagtgga 150297 Query: 388 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 447 ||||||| |||||| |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 150298 ggtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgcc 150357 Query: 448 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 505 | ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| || Sbjct: 150358 aatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct 150417 Query: 506 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 565 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 150418 -taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagg 150476 Query: 566 caaactctgaatacta 581 |||||||||||||||| Sbjct: 150477 caaactctgaatacta 150492 Score = 137 bits (69), Expect = 5e-29 Identities = 130/148 (87%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||| |||||||||| |||||||||||||||||| ||| ||||||| ||||||||||| Sbjct: 188385 tagcacggggcacgtg-aaatcccgtgtgaatcagcgagg-accacctcgcaaggctaaa 188442 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 || | ||| |||||||||| ||| |||||||||||||||||||||||||||||||| | Sbjct: 188443 tattactgaatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaaccccggg 188502 Query: 143 tgggtagtgaaatagaacgtgaaaccgt 170 ||| ||||||||||||| |||| |||| Sbjct: 188503 aggggagtgaaatagaacatgaacccgt 188530 Score = 129 bits (65), Expect = 1e-26 Identities = 129/148 (87%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||| |||||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 149942 tagcacggggcacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 149999 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 || | ||| |||||||||| ||| |||||||||||||||||||||||||||||||| | Sbjct: 150000 tattactgaatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaaccccggg 150059 Query: 143 tgggtagtgaaatagaacgtgaaaccgt 170 ||| ||||||||||||| |||| |||| Sbjct: 150060 aggggagtgaaatagaacatgaacccgt 150087
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Minus Query: 280 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 339 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 5974 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 5915 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 5914 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 5855 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 5854 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 5795 Query: 460 agctagctggttctccccgaaatgcgttgaggcg 493 ||||||||||||||||||||||| |||||||||| Sbjct: 5794 agctagctggttctccccgaaatacgttgaggcg 5761 Score = 103 bits (52), Expect = 6e-19 Identities = 107/124 (86%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 45 ccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgatagcg 104 ||||||||||| || ||| ||||||| | |||||||| |||| ||| ||||||||||||| Sbjct: 6201 ccgtgtgaatccgcgagg-accacctcgtaaggctaagtactactgtgtgaccgatagcg 6143 Query: 105 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 164 | ||||||| ||||||||||||||||||||||| | ||| ||||||||||||| ||| Sbjct: 6142 caacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaaatagaacatga 6083 Query: 165 aacc 168 |||| Sbjct: 6082 aacc 6079 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 6041 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 5994 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 280 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 339 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 211798 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 211857 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 211858 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 211917 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 211918 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 211977 Query: 460 agctagctggttctccccgaaatgcgttgaggcg 493 ||||||||||||||||||||||| |||||||||| Sbjct: 211978 agctagctggttctccccgaaatacgttgaggcg 212011 Score = 103 bits (52), Expect = 6e-19 Identities = 107/124 (86%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 45 ccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgatagcg 104 ||||||||||| || ||| ||||||| | |||||||| |||| ||| ||||||||||||| Sbjct: 211571 ccgtgtgaatccgcgagg-accacctcgtaaggctaagtactactgtgtgaccgatagcg 211629 Query: 105 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 164 | ||||||| ||||||||||||||||||||||| | ||| ||||||||||||| ||| Sbjct: 211630 caacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaaatagaacatga 211689 Query: 165 aacc 168 |||| Sbjct: 211690 aacc 211693 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 211731 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 211778 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 280 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 339 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 460 agctagctggttctccccgaaatgcgttgaggcg 493 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 133 bits (67), Expect = 7e-28 Identities = 113/127 (88%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 45 ccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgatagcg 104 |||||||||||||| ||| ||||||| | |||||||| |||||||| ||||||||||||| Sbjct: 259 ccgtgtgaatcagcgagg-accacctcgtaaggctaagtactcctgtgtgaccgatagcg 317 Query: 105 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 164 || ||||||| ||||||||||||||||||||||| | ||| ||||||||||||| ||| Sbjct: 318 aaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaaatagaacatga 377 Query: 165 aaccgtg 171 ||||||| Sbjct: 378 aaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 324 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 383 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 384 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 443 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 444 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 503 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 504 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 560 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 561 cgaggcaaactctgaatact 580 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 123 bits (62), Expect = 7e-25 Identities = 130/149 (87%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| ||||||||||||||| || ||| ||||||| | ||||||||| Sbjct: 387 tagcatggggcacgtg-aaatcccgtgtgaatctgcgagg-accacctcgtaaggctaaa 444 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaaccccca 141 |||||||| || |||||||| |||||||||||| |||||||||||| ||||||||||| Sbjct: 445 tactcctgagtcaccgatagtgaagtagtaccgcgagggaaaggtgaaaaagaacccctg 504 Query: 142 gtgggtagtgaaatagaacgtgaaaccgt 170 ||| ||||||| ||||| ||||||||| Sbjct: 505 taggggagtgaaaaagaacatgaaaccgt 533 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 207 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 570 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 618
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 324 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 383 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 384 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 443 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 444 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 503 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 504 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 560 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 561 cgaggcaaactctgaatact 580 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 123 bits (62), Expect = 7e-25 Identities = 130/149 (87%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| ||||||||||||||| || ||| ||||||| | ||||||||| Sbjct: 2125 tagcatggggcacgtg-aaatcccgtgtgaatctgcgagg-accacctcgtaaggctaaa 2182 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaaccccca 141 |||||||| || |||||||| |||||||||||| |||||||||||| ||||||||||| Sbjct: 2183 tactcctgagtcaccgatagtgaagtagtaccgcgagggaaaggtgaaaaagaacccctg 2242 Query: 142 gtgggtagtgaaatagaacgtgaaaccgt 170 ||| ||||||| ||||| ||||||||| Sbjct: 2243 taggggagtgaaaaagaacatgaaaccgt 2271 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 207 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 2308 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 2356
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 270 bits (136), Expect = 5e-69 Identities = 251/286 (87%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 267 |||||| |||||||||||||||||||||||||||| ||||| | |||| ||||||||| Sbjct: 2776 tgaccgtgtgcctgttgaagaatgagccggcgacttataggtactggca-ggttaaggg- 2833 Query: 268 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 327 |||| | |||||||| ||||||||||||||| ||||||||||| |||| | |||| Sbjct: 2834 --ggaaatc-ccggagccacagcgaaagcgagtctgaatagggcgatggtcagtatttat 2890 Query: 328 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 387 |||||||||| |||||||||| ||||| |||||||||||||||| ||| || | | || Sbjct: 2891 agacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgataccacgtgga 2950 Query: 388 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 447 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2951 ggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcc 3010 Query: 448 actcgaacccagagctagctggttctccccgaaatgcgttgaggcg 493 | |||||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 3011 aatcgaacccggagctagctggttctccccgaaatacgtttaggcg 3056 Score = 129 bits (65), Expect = 1e-26 Identities = 130/149 (87%), Gaps = 2/149 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||| || |||||||| ||| ||||||||||| || ||| ||||||| | |||||||| Sbjct: 2596 tagcacggagcacgtgg-aattccgtgtgaatctgcgagg-accacctcgtaaggctaag 2653 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||| | Sbjct: 2654 tactcctgtgtgaccgatagtgaagcagtaccgcgagggaaaggtgaaaagaaccccggg 2713 Query: 143 tgggtagtgaaatagaacgtgaaaccgtg 171 ||| ||||||||||||| |||||||||| Sbjct: 2714 aggggagtgaaatagaacatgaaaccgtg 2742 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 515 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 573 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 574 gaatac 579 |||||| Sbjct: 3139 gaatac 3144
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 278 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 332 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 333 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 392 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 393 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 452 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 453 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 509 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 510 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 568 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 569 actctgaatactagata 585 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 127 bits (64), Expect = 4e-26 Identities = 130/148 (87%), Gaps = 3/148 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 515 tagcatggggcacgtgg-aatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 572 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||||||||||||||| | | ||||||| ||||||| ||||| ||||||||| Sbjct: 573 tactcctgggtgaccgatagtgca-aagtaccgcgagggaatggtgataagaacccctgt 631 Query: 143 tgggtagtgaaatagaacgtgaaaccgt 170 ||| ||||||||||||| ||||||||| Sbjct: 632 aggggagtgaaatagaacatgaaaccgt 659 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 207 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 265 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 278 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 332 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 333 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 392 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 393 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 452 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 453 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 509 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 510 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 568 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 569 actctgaatactagata 585 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 127 bits (64), Expect = 4e-26 Identities = 130/148 (87%), Gaps = 3/148 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 515 tagcatggggcacgtgg-aatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 572 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||||||||||||||| | | ||||||| ||||||| ||||| ||||||||| Sbjct: 573 tactcctgggtgaccgatagtgca-aagtaccgcgagggaatggtgataagaacccctgt 631 Query: 143 tgggtagtgaaatagaacgtgaaaccgt 170 ||| ||||||||||||| ||||||||| Sbjct: 632 aggggagtgaaatagaacatgaaaccgt 659 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 207 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 265 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 8e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 291 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 350 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 351 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 410 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 411 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 470 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 471 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 527 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 528 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 163 bits (82), Expect = 8e-37 Identities = 194/228 (85%), Gaps = 5/228 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||| || |||||| ||||||||||| ||| ||||||| | ||||||||| Sbjct: 4 tagcatggggcacgagg-aatcccatgtgaatcagcgagg-accacctcgtaaggctaaa 61 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 62 tactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgga 121 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 122 aggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattta 178 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 250 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 179 aagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 266 bits (134), Expect = 8e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 278 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 337 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 137118 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 137177 Query: 338 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 397 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 137178 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 137237 Query: 398 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 457 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 137238 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 137297 Query: 458 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 514 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 137298 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 137357 Query: 515 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 574 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 137358 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 137417 Query: 575 aatactag 582 |||||||| Sbjct: 137418 aatactag 137425 Score = 266 bits (134), Expect = 8e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Minus Query: 278 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 337 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 48426 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 48367 Query: 338 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 397 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 48366 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 48307 Query: 398 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 457 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 48306 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 48247 Query: 458 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 514 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 48246 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 48187 Query: 515 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 574 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 48186 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 48127 Query: 575 aatactag 582 |||||||| Sbjct: 48126 aatactag 48119 Score = 135 bits (68), Expect = 2e-28 Identities = 133/148 (89%), Gaps = 5/148 (3%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| || ||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 136871 tagcatggggcacgtgg-aaccccgtgtgaatcagcgagg-accacctcgtaaggctaaa 136928 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaaccccca 141 ||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| ||||| Sbjct: 136929 tactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-cccca 136987 Query: 142 gt-gggtagtgaaatagaacgtgaaacc 168 || ||| |||| |||||||| ||||||| Sbjct: 136988 gtaggggagtgcaatagaacatgaaacc 137015 Score = 135 bits (68), Expect = 2e-28 Identities = 133/148 (89%), Gaps = 5/148 (3%) Strand = Plus / Minus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||||| || ||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 48673 tagcatggggcacgtgg-aaccccgtgtgaatcagcgagg-accacctcgtaaggctaaa 48616 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaaccccca 141 ||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| ||||| Sbjct: 48615 tactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-cccca 48557 Query: 142 gt-gggtagtgaaatagaacgtgaaacc 168 || ||| |||| |||||||| ||||||| Sbjct: 48556 gtaggggagtgcaatagaacatgaaacc 48529 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 265 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 137053 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 137110 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 265 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 48491 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 48434
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 266 bits (134), Expect = 8e-68 Identities = 267/310 (86%), Gaps = 6/310 (1%) Strand = Plus / Plus Query: 277 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 336 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 337 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 396 || |||||||||| ||||| |||||| ||||||||| |||||| | || |||||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaac 743 Query: 397 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 456 |||| || |||||||| || |||||||||||||||||||||||||||| ||| |||||| Sbjct: 744 cgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaact 803 Query: 457 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca- 510 | ||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 804 cggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcag 863 Query: 511 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 570 ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 864 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaac 923 Query: 571 tctgaatact 580 | ||||||| Sbjct: 924 taagaatact 933 Score = 204 bits (103), Expect = 2e-49 Identities = 211/243 (86%), Gaps = 7/243 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| |||||||||||||||||| ||| ||||||| | ||||||| | Sbjct: 382 tagcatggggcacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaca 439 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 440 tactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaacccccgc 499 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| || Sbjct: 500 aggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg--cctg 554 Query: 203 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 262 | | |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 555 agccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttggtta 614 Query: 263 agg 265 ||| Sbjct: 615 agg 617
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 266 bits (134), Expect = 8e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 280 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 339 |||||| |||||||||||||||||||||||||| |||||| || |||| |||||||||| Sbjct: 356101 ggagccatagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccc 356160 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 ||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 356161 tggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 356220 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| | Sbjct: 356221 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccagg 356280 Query: 460 agctagctggttctccccgaaatgcgttgaggcg 493 ||||||||||||||||||||||| |||||||||| Sbjct: 356281 agctagctggttctccccgaaatacgttgaggcg 356314 Score = 119 bits (60), Expect = 1e-23 Identities = 96/108 (88%) Strand = Plus / Plus Query: 64 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 123 ||||||| | |||||||| |||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 355893 accacctcgtaaggctaagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaa 355952 Query: 124 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 171 |||||||||||||||| | ||| ||||||||||||| |||||||||| Sbjct: 355953 aggtgaaaagaaccccgggaggggagtgaaatagaacatgaaaccgtg 356000 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 356034 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 356081 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcga 563 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 280 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 339 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2138158 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 2138099 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2138098 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2138039 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2138038 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 2137979 Query: 460 agctagctggttctccccgaaatgcgttgaggcg 493 ||||||||||||||||||||||| |||||||||| Sbjct: 2137978 agctagctggttctccccgaaatacgttgaggcg 2137945 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 280 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 339 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 476702 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 476761 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 476762 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 476821 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 476822 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 476881 Query: 460 agctagctggttctccccgaaatgcgttgaggcg 493 ||||||||||||||||||||||| |||||||||| Sbjct: 476882 agctagctggttctccccgaaatacgttgaggcg 476915 Score = 117 bits (59), Expect = 4e-23 Identities = 111/127 (87%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 45 ccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgatagcg 104 ||||||||||| || ||| ||||||| | |||||||| |||| ||| ||||||||||||| Sbjct: 2138384 ccgtgtgaatccgcgagg-accacctcgtaaggctaagtactactgtgtgaccgatagcg 2138326 Query: 105 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 164 || ||||||| ||||||||||||||||||||||| | ||| ||||||||||||| ||| Sbjct: 2138325 aaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaaatagaacatga 2138266 Query: 165 aaccgtg 171 ||||||| Sbjct: 2138265 aaccgtg 2138259 Score = 117 bits (59), Expect = 4e-23 Identities = 111/127 (87%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 45 ccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgatagcg 104 ||||||||||| || ||| ||||||| | |||||||| |||| ||| ||||||||||||| Sbjct: 476476 ccgtgtgaatccgcgagg-accacctcgtaaggctaagtactactgtgtgaccgatagcg 476534 Query: 105 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 164 || ||||||| ||||||||||||||||||||||| | ||| ||||||||||||| ||| Sbjct: 476535 aaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaaatagaacatga 476594 Query: 165 aaccgtg 171 ||||||| Sbjct: 476595 aaccgtg 476601 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2138225 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2138178 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 476635 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 476682 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 2e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 291 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 350 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 351 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 410 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 411 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 470 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 471 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 527 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 528 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 115 bits (58), Expect = 2e-22 Identities = 126/146 (86%), Gaps = 2/146 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||| || |||||| ||||||||| | ||| ||||||| | ||||||||| Sbjct: 4 tagcatggggcacgagg-aatcccatgtgaatcaccgagg-accacctcgtaaggctaaa 61 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 62 tactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgga 121 Query: 143 tgggtagtgaaatagaacgtgaaacc 168 ||| ||||||||||||| ||||||| Sbjct: 122 aggggagtgaaatagaacatgaaacc 147 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 250 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 258 bits (130), Expect = 2e-65 Identities = 253/292 (86%), Gaps = 4/292 (1%) Strand = Plus / Plus Query: 206 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 265 |||||| |||||||||||||||||||||||||||||| ||| | |||||| |||||||| Sbjct: 2303 tctgactgcgtgcctgttgaagaatgagccggcgacttataagtagtggca-ggttaagg 2361 Query: 266 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 325 | | | ||||||||| ||| ||||||||| || ||||||||| ||||||||| || Sbjct: 2362 tagagaat---accggagccatagtgaaagcgagcctgaatagggcgtttgtcactggtt 2418 Query: 326 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 385 || |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| Sbjct: 2419 atagacccgaacccggatgatctaaccatggccaggttgaagcttaggtaatactaagtg 2478 Query: 386 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 445 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2479 gaggaccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 2538 Query: 446 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 497 ||| ||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2539 ccaatcgaattcggagctagctggttctccccgaaatgcgtttaggcgcagc 2590 Score = 117 bits (59), Expect = 4e-23 Identities = 127/146 (86%), Gaps = 3/146 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||| ||||||| ||| |||||||||||||| ||| ||||||| | ||||||||| Sbjct: 2125 tagcatggagcacgtg-aaattccgtgtgaatcagcgagg-accacctcgtaaggctaaa 2182 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 || ||||| |||||||||| ||| |||||||||||||||||||||||||||||||| | Sbjct: 2183 tattcctgaatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaaccccggg 2242 Query: 143 tgggtagtgaaatagaacgtgaaacc 168 ||| ||||||| ||||| ||||||| Sbjct: 2243 aggggagtgaaa-agaacatgaaacc 2267
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 280 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 339 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 339409 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 339350 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 339349 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 339290 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 339289 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 339230 Query: 460 agctagctggttctccccgaaatgcgttgaggcg 493 ||||||||||||||||||||||| |||||||||| Sbjct: 339229 agctagctggttctccccgaaatacgttgaggcg 339196 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 280 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 339 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 132469 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 132410 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 132409 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 132350 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 132349 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 132290 Query: 460 agctagctggttctccccgaaatgcgttgaggcg 493 ||||||||||||||||||||||| |||||||||| Sbjct: 132289 agctagctggttctccccgaaatacgttgaggcg 132256 Score = 117 bits (59), Expect = 4e-23 Identities = 111/127 (87%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 45 ccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgatagcg 104 ||||||||||| || ||| ||||||| | |||||||| |||| ||| ||||||||||||| Sbjct: 339635 ccgtgtgaatccgcgagg-accacctcgtaaggctaagtactactgtgtgaccgatagcg 339577 Query: 105 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 164 || ||||||| ||||||||||||||||||||||| | ||| ||||||||||||| ||| Sbjct: 339576 aaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaaatagaacatga 339517 Query: 165 aaccgtg 171 ||||||| Sbjct: 339516 aaccgtg 339510 Score = 117 bits (59), Expect = 4e-23 Identities = 111/127 (87%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 45 ccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgatagcg 104 ||||||||||| || ||| ||||||| | |||||||| |||| ||| ||||||||||||| Sbjct: 132695 ccgtgtgaatccgcgagg-accacctcgtaaggctaagtactactgtgtgaccgatagcg 132637 Query: 105 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 164 || ||||||| ||||||||||||||||||||||| | ||| ||||||||||||| ||| Sbjct: 132636 aaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaaatagaacatga 132577 Query: 165 aaccgtg 171 ||||||| Sbjct: 132576 aaccgtg 132570 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 339476 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 339429 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 132536 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 132489 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 280 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 339 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 460 agctagctggttctccccgaaatgcgttgaggcg 493 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 137 bits (69), Expect = 5e-29 Identities = 131/149 (87%), Gaps = 2/149 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||| || |||||||| ||| |||||||||||||| ||| ||||||| | |||||||| Sbjct: 238 tagcacggagcacgtgg-aattccgtgtgaatcagcgagg-accacctcgtaaggctaag 295 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | Sbjct: 296 tactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccggg 355 Query: 143 tgggtagtgaaatagaacgtgaaaccgtg 171 ||| ||||||||||||| |||||||||| Sbjct: 356 aggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 280 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 339 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 460 agctagctggttctccccgaaatgcgttgaggcg 493 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 137 bits (69), Expect = 5e-29 Identities = 131/149 (87%), Gaps = 2/149 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||| || |||||||| ||| |||||||||||||| ||| ||||||| | |||||||| Sbjct: 238 tagcacggagcacgtgg-aattccgtgtgaatcagcgagg-accacctcgtaaggctaag 295 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | Sbjct: 296 tactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccggg 355 Query: 143 tgggtagtgaaatagaacgtgaaaccgtg 171 ||| ||||||||||||| |||||||||| Sbjct: 356 aggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 280 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 339 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 460 agctagctggttctccccgaaatgcgttgaggcg 493 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 137 bits (69), Expect = 5e-29 Identities = 131/149 (87%), Gaps = 2/149 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||| || |||||||| ||| |||||||||||||| ||| ||||||| | |||||||| Sbjct: 238 tagcacggagcacgtgg-aattccgtgtgaatcagcgagg-accacctcgtaaggctaag 295 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | Sbjct: 296 tactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccggg 355 Query: 143 tgggtagtgaaatagaacgtgaaaccgtg 171 ||| ||||||||||||| |||||||||| Sbjct: 356 aggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 280 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 339 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 460 agctagctggttctccccgaaatgcgttgaggcg 493 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 137 bits (69), Expect = 5e-29 Identities = 131/149 (87%), Gaps = 2/149 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||| || |||||||| ||| |||||||||||||| ||| ||||||| | |||||||| Sbjct: 238 tagcacggagcacgtgg-aattccgtgtgaatcagcgagg-accacctcgtaaggctaag 295 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | Sbjct: 296 tactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccggg 355 Query: 143 tgggtagtgaaatagaacgtgaaaccgtg 171 ||| ||||||||||||| |||||||||| Sbjct: 356 aggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 280 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 339 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 460 agctagctggttctccccgaaatgcgttgaggcg 493 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 137 bits (69), Expect = 5e-29 Identities = 131/149 (87%), Gaps = 2/149 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||| || |||||||| ||| |||||||||||||| ||| ||||||| | |||||||| Sbjct: 238 tagcacggagcacgtgg-aattccgtgtgaatcagcgagg-accacctcgtaaggctaag 295 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | Sbjct: 296 tactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccggg 355 Query: 143 tgggtagtgaaatagaacgtgaaaccgtg 171 ||| ||||||||||||| |||||||||| Sbjct: 356 aggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 258 bits (130), Expect = 2e-65 Identities = 271/312 (86%), Gaps = 7/312 (2%) Strand = Plus / Plus Query: 282 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 339 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 | ||||||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | | Sbjct: 776 ccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcgg 835 Query: 460 agctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctagg 516 |||||||||| ||||||||||||||||||||||||||| || || || || |||| || Sbjct: 836 agctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttgg 894 Query: 517 ggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 575 |||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| || Sbjct: 895 ggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcaga 954 Query: 576 atactagatatg 587 |||| ||||||| Sbjct: 955 atacaagatatg 966 Score = 153 bits (77), Expect = 8e-34 Identities = 132/148 (89%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||| |||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 408 tagcatgggacacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 465 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 466 tactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaacccctgt 525 Query: 143 tgggtagtgaaatagaacgtgaaaccgt 170 |||| ||||||||||||| ||||||||| Sbjct: 526 tggggagtgaaatagaacatgaaaccgt 553 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 266 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Minus Query: 218 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 277 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 39855 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 39800 Query: 278 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 336 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 39799 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 39740 Query: 337 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 396 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 39739 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 39680 Query: 397 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 456 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 39679 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 39620 Query: 457 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 515 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 39619 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 39560 Query: 516 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 575 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 39559 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 39500 Query: 576 atacta 581 |||||| Sbjct: 39499 atacta 39494 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 218 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 277 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 19545 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 19600 Query: 278 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 336 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 19601 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 19660 Query: 337 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 396 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 19661 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 19720 Query: 397 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 456 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 19721 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 19780 Query: 457 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 515 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 19781 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 19840 Query: 516 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 575 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 19841 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 19900 Query: 576 atacta 581 |||||| Sbjct: 19901 atacta 19906 Score = 99.6 bits (50), Expect = 1e-17 Identities = 102/117 (87%), Gaps = 2/117 (1%) Strand = Plus / Minus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||| |||||| || |||||||||||| || ||| ||||||| | ||||||||| Sbjct: 40045 tagcatgggacacgtg-aaaccccgtgtgaatctgcgagg-accacctcgtaaggctaaa 39988 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 139 || ||||| |||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 39987 tattcctgaatgaccgatagcgaacaagtaccgcgagggaaaggtgaaaagaacccc 39931 Score = 99.6 bits (50), Expect = 1e-17 Identities = 102/117 (87%), Gaps = 2/117 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||| |||||| || |||||||||||| || ||| ||||||| | ||||||||| Sbjct: 19355 tagcatgggacacgtg-aaaccccgtgtgaatctgcgagg-accacctcgtaaggctaaa 19412 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 139 || ||||| |||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 19413 tattcctgaatgaccgatagcgaacaagtaccgcgagggaaaggtgaaaagaacccc 19469
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 252 bits (127), Expect = 1e-63 Identities = 272/317 (85%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 278 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 332 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 333 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 392 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 876 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 935 Query: 393 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 452 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 936 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 995 Query: 453 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 509 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 996 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1054 Query: 510 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 568 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1055 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1114 Query: 569 actctgaatactagata 585 |||| |||||||||||| Sbjct: 1115 actcagaatactagata 1131 Score = 151 bits (76), Expect = 3e-33 Identities = 207/244 (84%), Gaps = 10/244 (4%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||| ||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 573 tagcatgggacacgtgg-aatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 630 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||||||||||||||| | | ||||||| ||||||| ||||| ||||||||| Sbjct: 631 tactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaacccctgt 689 Query: 143 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 202 ||| ||||||||||||| |||||||| | |||| ||||||||||||| |||| Sbjct: 690 aggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---aagtt 743 Query: 203 atctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 261 | || ||||||||||||||||||||||||||||||||||| ||||| |||||| |||| Sbjct: 744 aacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaaggtt 803 Query: 262 aagg 265 |||| Sbjct: 804 aagg 807
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 310/368 (84%), Gaps = 5/368 (1%) Strand = Plus / Plus Query: 213 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 272 |||||||||||||||||||||||||||||| ||||||| |||| ||||||||| | | Sbjct: 188 gcgtgcctgttgaagaatgagccggcgacttataggcactggca-ggttaaggggaataa 246 Query: 273 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 332 |||| | |||| || |||| ||||||| ||||||||| | |||| || |||| |||| Sbjct: 247 accc---gaagccaaagggaaaccgagtctgaatagggcgttagtcagtgtttatagacc 303 Query: 333 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 392 |||||| |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||| Sbjct: 304 cgaacccgggtgatctaaccatgtccaggatgaagcttgggtgacaccaagtggaggtcc 363 Query: 393 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 452 |||||||| |||||| | ||||||||| |||||||||||||||||||||| ||| Sbjct: 364 gaaccgaccaccgttgaaaaggtggcggatgaggtgtggttaggggtgaaatgccaatcg 423 Query: 453 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 512 ||||| ||||||||||||||||| ||||||| |||||||| |||| |||| ||| | Sbjct: 424 aacccggagctagctggttctcctcgaaatgtgttgaggcacagcggttgtgattacagc 483 Query: 513 t-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 571 | |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||| Sbjct: 484 tggggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaact 543 Query: 572 ctgaatac 579 | |||||| Sbjct: 544 cagaatac 551 Score = 107 bits (54), Expect = 4e-20 Identities = 128/149 (85%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||| |||||||||| ||||||||||||||| | ||| ||||||| |||| |||| Sbjct: 4 tagcacggggcacgtg-aaatcccgtgtgaatccaccagg-accacctcttaaggttaaa 61 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||| ||||||||||| ||| ||||||| ||||||||||||||||||| |||| | Sbjct: 62 tactcctgcgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaa-ccccgg 120 Query: 143 tgggtagtgaaatagaacgtgaaaccgtg 171 ||| ||||||||||||| |||||||||| Sbjct: 121 aggggagtgaaatagaacatgaaaccgtg 149
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 288 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 347 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 348 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 407 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 408 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 467 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 468 ggttctccccgaaatgcgttgaggcgcagc 497 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 121 bits (61), Expect = 3e-24 Identities = 141/167 (84%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 74 aaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaag 133 ||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| Sbjct: 53 aaggctaaatactcctgtgtgaccgatagagaaccagtaccgcgagggaaaggtgaaaag 112 Query: 134 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 193 |||||| | ||| ||||||||||||| ||||||||| |||| ||||||||||||| Sbjct: 113 aaccccgggaggggagtgaaatagaacctgaaaccgtt---agcttacaagcagtgggag 169 Query: 194 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 240 | | | |||||||||||||||||||||| |||||||||||| Sbjct: 170 gacgattaaacgtctgaccgcgtgcctgttgaagcatgagccggcga 216 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 515 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 574 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 575 aatac 579 ||||| Sbjct: 548 aatac 552
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 288 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 347 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 348 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 407 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 408 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 467 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 468 ggttctccccgaaatgcgttgaggcgcagc 497 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 115 bits (58), Expect = 2e-22 Identities = 113/130 (86%), Gaps = 1/130 (0%) Strand = Plus / Plus Query: 41 aatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgat 100 ||||||||||||||| || ||| |||| || | ||||||||||||| ||| ||||||||| Sbjct: 21 aatcccgtgtgaatctgcgagg-accatctcgtaaggctaaatactactgtgtgaccgat 79 Query: 101 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 160 || ||| ||||||| ||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 80 agtgaaccagtaccgcgagggaaaggtgaaaagaaccccgaaaggggagtgaaatagaac 139 Query: 161 gtgaaaccgt 170 ||||||||| Sbjct: 140 ctgaaaccgt 149 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 515 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 574 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 575 aatac 579 ||||| Sbjct: 548 aatac 552 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| ||||||||||||| |||||||||||| | |||||||||||| Sbjct: 184 tgaccgtgtgcctgttgaagcatgagccggcgagttataggcagtggc 231
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 250 bits (126), Expect = 4e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 278 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 336 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 337 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 396 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 397 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 456 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 457 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 514 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 515 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 573 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 574 gaatactagatatg 587 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 161 bits (81), Expect = 3e-36 Identities = 133/148 (89%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 400 tagcatggggcacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 457 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 458 tactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaacccctgt 517 Query: 143 tgggtagtgaaatagaacgtgaaaccgt 170 |||| ||||||||||||| ||||||||| Sbjct: 518 tggggagtgaaatagaacatgaaaccgt 545 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 256 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 280 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 339 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 460 agctagctggttctccccgaaatgcgttgaggcg 493 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 137 bits (69), Expect = 5e-29 Identities = 131/149 (87%), Gaps = 2/149 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||| || |||||||| ||| |||||||||||||| ||| ||||||| | |||||||| Sbjct: 225 tagcacggagcacgtgg-aattccgtgtgaatcagcgagg-accacctcgtaaggctaag 282 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | Sbjct: 283 tactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccggg 342 Query: 143 tgggtagtgaaatagaacgtgaaaccgtg 171 ||| ||||||||||||| |||||||||| Sbjct: 343 aggggagtgaaatagaacatgaaaccgtg 371 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 248 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 280 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 339 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 460 agctagctggttctccccgaaatgcgttgaggcg 493 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 137 bits (69), Expect = 5e-29 Identities = 131/149 (87%), Gaps = 2/149 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||| || |||||||| ||| |||||||||||||| ||| ||||||| | |||||||| Sbjct: 225 tagcacggagcacgtgg-aattccgtgtgaatcagcgagg-accacctcgtaaggctaag 282 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | Sbjct: 283 tactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccggg 342 Query: 143 tgggtagtgaaatagaacgtgaaaccgtg 171 ||| ||||||||||||| |||||||||| Sbjct: 343 aggggagtgaaatagaacatgaaaccgtg 371 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 248 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 280 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 339 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 460 agctagctggttctccccgaaatgcgttgaggcg 493 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 137 bits (69), Expect = 5e-29 Identities = 131/149 (87%), Gaps = 2/149 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||| || |||||||| ||| |||||||||||||| ||| ||||||| | |||||||| Sbjct: 225 tagcacggagcacgtgg-aattccgtgtgaatcagcgagg-accacctcgtaaggctaag 282 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | Sbjct: 283 tactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccggg 342 Query: 143 tgggtagtgaaatagaacgtgaaaccgtg 171 ||| ||||||||||||| |||||||||| Sbjct: 343 aggggagtgaaatagaacatgaaaccgtg 371 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 248 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 4e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 386 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 445 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 446 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 505 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 506 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 562 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 563 aggcaaactctgaatactag 582 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 163 bits (82), Expect = 8e-37 Identities = 110/117 (94%), Gaps = 2/117 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 380 tagcatggggcacgtg-aaatcccgtgtgaatccgcaagg-accaccttgcaaggctaaa 437 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 139 ||||||| | |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 438 tactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 494 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 209 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 265 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 315 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 370 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 250 bits (126), Expect = 4e-63 Identities = 152/157 (96%), Gaps = 3/157 (1%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 362 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 420 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 479 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaata 156 ||||||||||||||||||||||||||||||||||||| Sbjct: 480 ggaaaggtgaaaagaacccccagtgggtagtgaaata 516
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 250 bits (126), Expect = 4e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 278 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 336 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 337 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 396 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 397 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 456 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 457 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 514 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 515 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 573 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 574 gaatactagatatg 587 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 161 bits (81), Expect = 3e-36 Identities = 133/148 (89%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 400 tagcatggggcacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 457 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 458 tactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaacccctgt 517 Query: 143 tgggtagtgaaatagaacgtgaaaccgt 170 |||| ||||||||||||| ||||||||| Sbjct: 518 tggggagtgaaatagaacatgaaaccgt 545 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 256 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 248 bits (125), Expect = 2e-62 Identities = 197/221 (89%) Strand = Plus / Plus Query: 277 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 336 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 337 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 396 || |||||||||| |||||||||||||||||||| | ||| ||| ||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaac 741 Query: 397 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 456 |||| ||||||||| |||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 742 cgaccgatgttgaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaact 801 Query: 457 cagagctagctggttctccccgaaatgcgttgaggcgcagc 497 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 802 cggagctagctggttctccccgaaatgcgttgaggcgcagc 842 Score = 145 bits (73), Expect = 2e-31 Identities = 131/148 (88%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| |||||||||||||||| | ||| ||||||| | ||| ||||| Sbjct: 377 tagcatggggcacgtg-aaatcccgtgtgaatcaacgagg-accacctcgtaagactaaa 434 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 435 tactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaacccccat 494 Query: 143 tgggtagtgaaatagaacgtgaaaccgt 170 ||| ||||||||||| | ||||||||| Sbjct: 495 aggggagtgaaatagatcatgaaaccgt 522 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 206 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 265 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 510 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 569 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 570 ctctgaatactagata 585 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 246 bits (124), Expect = 7e-62 Identities = 273/317 (86%), Gaps = 8/317 (2%) Strand = Plus / Plus Query: 278 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 334 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 335 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 394 |||| ||||||||||| ||||||||||||||||||||| | | || ||| ||||||||| Sbjct: 704 aacccgggtgatctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccga 763 Query: 395 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 454 |||||| ||||||||| |||| |||||||||||||| |||||| ||||| ||| ||||| Sbjct: 764 accgaccgatgttgaaaaatcggcggatgagttgtgaataggggagaaattccaatcgaa 823 Query: 455 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-at 511 | | ||||||||||| ||||||||||||||||||||||||||| || || || || || Sbjct: 824 ctcggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactat 882 Query: 512 ctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 570 || |||||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||| Sbjct: 883 cttggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaac 942 Query: 571 tctgaatactagatatg 587 || |||||| ||||||| Sbjct: 943 tcagaatacaagatatg 959 Score = 153 bits (77), Expect = 8e-34 Identities = 132/148 (89%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||||| |||||||||||||||||| ||| ||||||| | ||||| ||| Sbjct: 400 tagcatggggcacgtg-aaatcccgtgtgaatcagcgagg-accacctcgtaaggcaaaa 457 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 458 tactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaacccctgt 517 Query: 143 tgggtagtgaaatagaacgtgaaaccgt 170 |||| ||||||||||||| ||||||||| Sbjct: 518 tggggagtgaaatagaacatgaaaccgt 545 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 265 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 246 bits (124), Expect = 7e-62 Identities = 269/314 (85%), Gaps = 5/314 (1%) Strand = Plus / Plus Query: 278 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 335 |||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct: 718 ccggagccttagcgaaagcaagtcttaatagggcgataaagtcacttcttatggacccga 777 Query: 336 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 395 ||| ||||||||||| |||| |||||||||||||||| | | || || |||||||||| Sbjct: 778 acccgggtgatctattcatggccaggatgaagcttgggtaacacctagtggaggtccgaa 837 Query: 396 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 455 ||||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 838 ccgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaac 897 Query: 456 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg--actggacatct 513 | ||||||||||| ||||||||||||||||||||||||||| || | | | |||| Sbjct: 898 tcggagctagctggatctccccgaaatgcgttgaggcgcagcggtggctatgagctatct 957 Query: 514 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 572 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 958 agaggtaaagcgactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1017 Query: 573 tgaatactagatat 586 ||||||||||||| Sbjct: 1018 agaatactagatat 1031 Score = 119 bits (60), Expect = 1e-23 Identities = 129/148 (87%), Gaps = 3/148 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||| ||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 475 tagcatgggacacgtgg-aatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 532 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||||||||||||||| | | ||||||| ||||||| ||| ||||||||||| Sbjct: 533 tactcctgggtgaccgatagtgca-aagtaccgcgagggaatggtaaaaagaacccctgt 591 Query: 143 tgggtagtgaaatagaacgtgaaaccgt 170 ||| ||||||||||||| ||||||||| Sbjct: 592 aggggagtgaaatagaacatgaaaccgt 619 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 207 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 265 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 651 ctgaccgcgtgcctgttgaagaatgagcctgcgacttatagggagtggcaaggttaagg 709
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 288 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 347 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 348 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 407 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 408 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 467 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 468 ggttctccccgaaatgcgttgaggcgcagcagttg 502 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 147 bits (74), Expect = 5e-32 Identities = 131/148 (88%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||| ||| |||||| ||||||||||| || |||| || | ||||||||| Sbjct: 4 tagcatggggcaggtg-aaatcccatgtgaatcagcgag-aaccatctcgtaaggctaaa 61 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 62 tactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccgaa 121 Query: 143 tgggtagtgaaatagaacgtgaaaccgt 170 ||| ||||||||||||| ||||||||| Sbjct: 122 aggggagtgaaatagaacatgaaaccgt 149 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 515 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 574 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 575 aatac 579 ||||| Sbjct: 550 aatac 554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 206 tctgaccgcgtgcctgttgaagaatgagccggcga 240 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 244 bits (123), Expect = 3e-61 Identities = 262/305 (85%), Gaps = 5/305 (1%) Strand = Plus / Plus Query: 278 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 337 |||||||| || |||| ||||||| || ||||||| ||| || |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaac 308 Query: 338 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 397 | ||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 cctggtgatctaaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 398 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 457 ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacca 428 Query: 458 agagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag 515 ||||||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctgg 486 Query: 516 -gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 574 |||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 575 aatac 579 ||||| Sbjct: 547 aatac 551 Score = 119 bits (60), Expect = 1e-23 Identities = 128/148 (86%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 |||||||||||||| || |||||| ||||||||||| ||| |||| || | ||||||||| Sbjct: 4 tagcatggggcacgagg-aatcccatgtgaatcagcgagg-accatctcgtaaggctaaa 61 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 62 tactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgga 121 Query: 143 tgggtagtgaaatagaacgtgaaaccgt 170 ||| ||||||||||||| ||||||||| Sbjct: 122 aggggagtgaaatagaacatgaaaccgt 149 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 250 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 244 bits (123), Expect = 3e-61 Identities = 267/310 (86%), Gaps = 5/310 (1%) Strand = Plus / Plus Query: 278 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 337 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 338 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 397 | |||||||||| |||| |||||||||| |||| | | || || | |||||||||||| Sbjct: 878 ccgggtgatctaatcatggccaggatgaaatttgggtaacaccaaccggaggtccgaacc 937 Query: 398 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 457 ||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | Sbjct: 938 gaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactc 997 Query: 458 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt--gactggacatctag 515 ||||||||||| ||||||||||||||||||||||||||| ||| || | ||||||| Sbjct: 998 ggagctagctggatctccccgaaatgcgttgaggcgcagcggttaagatttaccatctag 1057 Query: 516 gggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 574 ||||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||||| | Sbjct: 1058 gggtaaagcgactgtttcggtgcgggctgcgaaagcggtaccaagtcgtggcaaactcag 1117 Query: 575 aatactagat 584 |||||||||| Sbjct: 1118 aatactagat 1127 Score = 159 bits (80), Expect = 1e-35 Identities = 133/148 (89%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||| ||||||| |||||||||||||||||| ||| ||||||| | ||||||||| Sbjct: 564 tagcatgggacacgtgg-aatcccgtgtgaatcagcgagg-accacctcgtaaggctaaa 621 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct: 622 tactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacctctga 681 Query: 143 tgggtagtgaaatagaacgtgaaaccgt 170 | | ||||||||||||| ||||||||| Sbjct: 682 agaggagtgaaatagaacatgaaaccgt 709 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 207 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 244 bits (123), Expect = 3e-61 Identities = 211/234 (90%), Gaps = 9/234 (3%) Strand = Plus / Plus Query: 1 actagcttatgctctgacccgn-tagcatggggcacgtggnaatcccgtgtgaatcagca 59 ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 411 actagcttacgctctgacccgagtagcatggggcacgtgg-aatcccgtgtgaatcagca 469 Query: 60 aggnaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 119 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 agg-accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 528 Query: 120 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 179 |||| |||||||||||||||| ||| ||||||||||||| |||||||| | ||||| Sbjct: 529 ggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taagctc 585 Query: 180 ccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatga 232 |||||||| |||||| | || | |||||||||||||||||||||||||||| Sbjct: 586 ccaagcagngggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatga 637
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 288 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 347 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 348 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 407 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 408 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 467 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 468 ggttctccccgaaatgcgttgaggcg 493 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 113 bits (57), Expect = 7e-22 Identities = 128/149 (85%), Gaps = 2/149 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||| || |||||||| ||| ||||||||||| || ||| ||||||| | |||||||| Sbjct: 319978 tagcacggagcacgtgg-aattccgtgtgaatctgcgagg-accacctcgtaaggctaag 320035 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| | Sbjct: 320036 tactactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccccggg 320095 Query: 143 tgggtagtgaaatagaacgtgaaaccgtg 171 ||| ||||||||||||| |||||||||| Sbjct: 320096 aggggagtgaaatagaacatgaaaccgtg 320124 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 320158 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 320205 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcga 563 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Minus Query: 280 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 339 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 1775855 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 1775796 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 1775795 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 1775736 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 1775735 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 1775676 Query: 460 agctagctggttctccccgaaatgcgttgaggcg 493 ||||||||||||||||||||||| |||||||||| Sbjct: 1775675 agctagctggttctccccgaaatacgttgaggcg 1775642 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 280 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 339 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 376214 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 376273 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 376274 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 376333 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 376334 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 376393 Query: 460 agctagctggttctccccgaaatgcgttgaggcg 493 ||||||||||||||||||||||| |||||||||| Sbjct: 376394 agctagctggttctccccgaaatacgttgaggcg 376427 Score = 117 bits (59), Expect = 4e-23 Identities = 111/127 (87%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 45 ccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgatagcg 104 ||||||||||| || ||| ||||||| | |||||||| |||| ||| ||||||||||||| Sbjct: 1776081 ccgtgtgaatccgcgagg-accacctcgtaaggctaagtactactgtgtgaccgatagcg 1776023 Query: 105 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 164 || ||||||| ||||||||||||||||||||||| | ||| ||||||||||||| ||| Sbjct: 1776022 aaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaaatagaacatga 1775963 Query: 165 aaccgtg 171 ||||||| Sbjct: 1775962 aaccgtg 1775956 Score = 117 bits (59), Expect = 4e-23 Identities = 111/127 (87%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 45 ccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgatagcg 104 ||||||||||| || ||| ||||||| | |||||||| |||| ||| ||||||||||||| Sbjct: 375988 ccgtgtgaatccgcgagg-accacctcgtaaggctaagtactactgtgtgaccgatagcg 376046 Query: 105 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 164 || ||||||| ||||||||||||||||||||||| | ||| ||||||||||||| ||| Sbjct: 376047 aaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaaatagaacatga 376106 Query: 165 aaccgtg 171 ||||||| Sbjct: 376107 aaccgtg 376113 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1775922 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 1775875 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 376147 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 376194 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 288 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 347 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 348 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 407 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 408 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 467 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 468 ggttctccccgaaatgcgttgaggcg 493 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 99.6 bits (50), Expect = 1e-17 Identities = 128/150 (85%), Gaps = 3/150 (2%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||| || |||||||| ||| ||||||||||| || ||| ||||||| | |||||||| Sbjct: 2400 tagcacggagcacgtgg-aattccgtgtgaatctgcgagg-accacctcgtaaggctaag 2457 Query: 83 tac-tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 141 ||| | ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 2458 tacctactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccccgg 2517 Query: 142 gtgggtagtgaaatagaacgtgaaaccgtg 171 | ||| ||||||||||||| |||||||||| Sbjct: 2518 gaggggagtgaaatagaacatgaaaccgtg 2547 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2581 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2628 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcga 563 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 288 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 347 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 348 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 407 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 408 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 467 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 468 ggttctccccgaaatgcgttgaggcg 493 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 113 bits (57), Expect = 7e-22 Identities = 128/149 (85%), Gaps = 2/149 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||| || |||||||| ||| ||||||||||| || ||| ||||||| | |||||||| Sbjct: 2402 tagcacggagcacgtgg-aattccgtgtgaatctgcgagg-accacctcgtaaggctaag 2459 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| | Sbjct: 2460 tactactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccccggg 2519 Query: 143 tgggtagtgaaatagaacgtgaaaccgtg 171 ||| ||||||||||||| |||||||||| Sbjct: 2520 aggggagtgaaatagaacatgaaaccgtg 2548 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2582 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2629 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcga 563 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 280 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 339 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2876 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 2935 Query: 340 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 399 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2936 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2995 Query: 400 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 459 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2996 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 3055 Query: 460 agctagctggttctccccgaaatgcgttgaggcg 493 ||||||||||||||||||||||| |||||||||| Sbjct: 3056 agctagctggttctccccgaaatacgttgaggcg 3089 Score = 117 bits (59), Expect = 4e-23 Identities = 111/127 (87%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 45 ccgtgtgaatcagcaaggnaccaccttgcaaggctaaatactcctgggtgaccgatagcg 104 ||||||||||| || ||| ||||||| | |||||||| |||| ||| ||||||||||||| Sbjct: 2650 ccgtgtgaatccgcgagg-accacctcgtaaggctaagtactactgtgtgaccgatagcg 2708 Query: 105 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 164 || ||||||| ||||||||||||||||||||||| | ||| ||||||||||||| ||| Sbjct: 2709 aaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaaatagaacatga 2768 Query: 165 aaccgtg 171 ||||||| Sbjct: 2769 aaccgtg 2775 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2809 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2856 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 3127 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 3177
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 1e-60 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 288 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 347 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 348 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 407 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 408 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 467 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 468 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 524 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 525 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 579 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 89.7 bits (45), Expect = 1e-14 Identities = 124/148 (83%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||||||||||||| | ||||||||||||||| || | ||||| | ||||||||| Sbjct: 4 tagcatggggcacgt-gaaatcccgtgtgaatctgcctcg-accacgaggtaaggctaaa 61 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 || ||| | ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 62 tattcccgtgtgaccgatagagaaacagtaccgcgagggaaaggtgaaaagaaccccgga 121 Query: 143 tgggtagtgaaatagaacgtgaaaccgt 170 ||| ||||||||||||| ||||||||| Sbjct: 122 aggggagtgaaatagaacatgaaaccgt 149 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 206 tctgaccgcgtgcctgttgaagaatgagccggcgact 242 |||||||| |||||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcgact 218
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 288 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 347 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 348 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 407 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 408 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 467 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 468 ggttctccccgaaatgcgttgaggcg 493 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 113 bits (57), Expect = 7e-22 Identities = 128/149 (85%), Gaps = 2/149 (1%) Strand = Plus / Minus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||| || |||||||| ||| ||||||||||| || ||| ||||||| | |||||||| Sbjct: 20479 tagcacggagcacgtgg-aattccgtgtgaatctgcgagg-accacctcgtaaggctaag 20422 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| | Sbjct: 20421 tactactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccccggg 20362 Query: 143 tgggtagtgaaatagaacgtgaaaccgtg 171 ||| ||||||||||||| |||||||||| Sbjct: 20361 aggggagtgaaatagaacatgaaaccgtg 20333 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 20299 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 20252 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcga 563 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 288 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 347 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 348 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 407 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 408 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 467 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 468 ggttctccccgaaatgcgttgaggcg 493 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 113 bits (57), Expect = 7e-22 Identities = 128/149 (85%), Gaps = 2/149 (1%) Strand = Plus / Minus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||| || |||||||| ||| ||||||||||| || ||| ||||||| | |||||||| Sbjct: 2233 tagcacggagcacgtgg-aattccgtgtgaatctgcgagg-accacctcgtaaggctaag 2176 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| | Sbjct: 2175 tactactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccccggg 2116 Query: 143 tgggtagtgaaatagaacgtgaaaccgtg 171 ||| ||||||||||||| |||||||||| Sbjct: 2115 aggggagtgaaatagaacatgaaaccgtg 2087 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2053 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2006 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcga 563 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 288 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 347 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 348 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 407 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 408 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 467 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 468 ggttctccccgaaatgcgttgaggcg 493 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 113 bits (57), Expect = 7e-22 Identities = 128/149 (85%), Gaps = 2/149 (1%) Strand = Plus / Plus Query: 23 tagcatggggcacgtggnaatcccgtgtgaatcagcaaggnaccaccttgcaaggctaaa 82 ||||| || |||||||| ||| ||||||||||| || ||| ||||||| | |||||||| Sbjct: 315467 tagcacggagcacgtgg-aattccgtgtgaatctgcgagg-accacctcgtaaggctaag 315524 Query: 83 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 142 |||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| | Sbjct: 315525 tactactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccccggg 315584 Query: 143 tgggtagtgaaatagaacgtgaaaccgtg 171 ||| ||||||||||||| |||||||||| Sbjct: 315585 aggggagtgaaatagaacatgaaaccgtg 315613 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 255 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 315647 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 315694 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 529 tttcggtgcgggctgcgcgagcggtaccaaatcga 563 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,288,540 Number of Sequences: 3902068 Number of extensions: 3288540 Number of successful extensions: 94444 Number of sequences better than 10.0: 25438 Number of HSP's better than 10.0 without gapping: 25269 Number of HSP's successfully gapped in prelim test: 204 Number of HSP's that attempted gapping in prelim test: 52396 Number of HSP's gapped (non-prelim): 39533 length of query: 591 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 568 effective length of database: 17,143,297,704 effective search space: 9737393095872 effective search space used: 9737393095872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
