>FBX38_MOUSE (Q8BMI0) F-box only protein 38 (Modulator of KLF7 activity) (MoKA)|
          Length = 1194

 Score = 34.7 bits (78), Expect = 0.23
 Identities = 24/91 (26%), Positives = 41/91 (45%)
 Frame = +3

Query: 48   ISTAQEEFIPPCVKCIKRETANSAPETSNASIATNYSTVHVVSNSSLEETTKAADKNAGL 227
            IS ++     PC    ++ TA+ +  TS+  I  ++  V V+ + +L   T     N G+
Sbjct: 887  ISESEVAKTKPCHAMKRKRTADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMT---NCGI 943

Query: 228  KELYMTSIYKSLKGHQTLCNVLKRQILNRNP 320
             +L +    K +  H T C VLK   +   P
Sbjct: 944  TDLVLKDCPKMMFIHATRCRVLKHLKVENAP 974

>PICA_RAT (O55012) Phosphatidylinositol-binding clathrin assembly protein|
           (Clathrin assembly lymphoid myeloid leukemia protein)
           (rCALM)
          Length = 640

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 7/44 (15%)
 Frame = +2

Query: 341 ERKLDVDGSYWKPKTYPKTSWVAA-KGPPI------DPSTLIGF 451
           E+KL   GS W+PK  P T+W AA   PP+       P+ +IG+
Sbjct: 557 EKKL-TGGSNWQPKVAPTTAWSAATMAPPVMAYPATTPTGMIGY 599

>FBX38_HUMAN (Q6PIJ6) F-box only protein 38 (Modulator of KLF7 activity homolog)|
            (MoKA)
          Length = 1188

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 20/75 (26%), Positives = 35/75 (46%)
 Frame = +3

Query: 96   KRETANSAPETSNASIATNYSTVHVVSNSSLEETTKAADKNAGLKELYMTSIYKSLKGHQ 275
            ++ TA+ +  TS+  I  ++  V V+ + +L   T     N G+ +L +    K +  H 
Sbjct: 897  RKRTADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMT---NCGITDLVLKDCPKMMFIHA 953

Query: 276  TLCNVLKRQILNRNP 320
            T C VLK   +   P
Sbjct: 954  TRCRVLKHLKVENAP 968

>POLG_EC09B (Q66577) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
           protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
           VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
           P2A); Core protein P2B; Core protein P2C; Core protein
           P3A; Genome
          Length = 2202

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
 Frame = +2

Query: 356 VDGSYWKPKTYPKTSWVAAKGPP--IDPSTLIGFACKISYSSDESFDSNYKL---FKNQS 520
           VDG  W+  T P   W     PP    P   IG A    Y     FDS         N+ 
Sbjct: 725 VDGYEWQTSTNPSIFWTEGNAPPRMSIPFISIGNAYSSFYDGWSHFDSKGAYGFNTLNKM 784

Query: 521 GEVFARYV 544
           G ++ R+V
Sbjct: 785 GHIYCRHV 792

>YOR1_YEAST (P53049) Oligomycin resistance ATP-dependent permease YOR1|
          Length = 1477

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +2

Query: 281  LQCSQKADSEQESEERGIAFERKLDVDGSYWKPKTYPKTSW 403
            L+   + +++  S ER + +  +L ++ SY KP+  P  SW
Sbjct: 1167 LRAMTQTENDMNSAERLVTYATELPLEASYRKPEMTPPESW 1207

>POLG_EC09H (Q66849) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
           protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
           VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
           P2A); Core protein P2B; Core protein P2C; Core protein
           P3A; Genome
          Length = 2192

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
 Frame = +2

Query: 356 VDGSYWKPKTYPKTSWVAAKGPP--IDPSTLIGFACKISYSSDESFDSNYKL---FKNQS 520
           VDG  W+  T P   W     PP    P   IG A    Y     FDS         N+ 
Sbjct: 725 VDGYEWQTSTNPSIFWTEGNAPPRMSIPFISIGNAYSSFYDGWSHFDSKGAYGFNTLNKM 784

Query: 521 GEVFARYV 544
           G ++ R+V
Sbjct: 785 GHIYCRHV 792

>UGTAP_HUMAN (Q9HD40) UGA suppressor tRNA-associated protein|
           (tRNA(Ser)Sec-associated antigenic protein) (SLA/LP
           autoantigen) (Soluble liver antigen) (SLA)
           (Liver-pancreas antigen) (LP) (SLA-p35)
          Length = 501

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
 Frame = +3

Query: 18  MENDTLLS--QQISTAQEEFIPPCVKCIKRETANSAPETSN-----ASIATNYSTVHVVS 176
           +E D L +  + +    +E  P C+ CI   T+  AP   +     A I  NY   H+V+
Sbjct: 193 LEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVN 252

Query: 177 NSSLEETTK 203
           N+   +++K
Sbjct: 253 NAYGVQSSK 261

>PER_DROTP (P91716) Period circadian protein (Fragment)|
          Length = 390

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
 Frame = +3

Query: 30  TLLSQQISTAQEEFIP-----PCVKCIKRETANSAPETSNASIATNYSTVHVVSNSSLEE 194
           ++LS   + AQ  F P     P    I    A S+P  +N S    +   HV S+S    
Sbjct: 293 SVLSSHTAVAQSSFSPQHSLFPTFYYIPASIAASSPSGTNPSPNRPHKHAHVHSSSEKPS 352

Query: 195 TTKAADKNAGLKELYMTSI 251
           T++AA     L+  YMT +
Sbjct: 353 TSQAAAATMPLQ--YMTGV 369

>TFP11_MOUSE (Q9ERA6) Tuftelin-interacting protein 11 (Tuftelin-interacting|
           protein 39)
          Length = 838

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
 Frame = +2

Query: 260 SQRASNPLQCSQKADSEQESEERGIAFERKL-----DVDGSYWKPK-TYPKTSWVAAKG 418
           S+R +  LQ    ADSE+E+EE    F+++L     D  GS  KPK +Y     + AKG
Sbjct: 196 SERTTQSLQDFPVADSEEEAEEE---FQKELSQWRKDPSGSKKKPKYSYKTVEELKAKG 251

>ZN692_MOUSE (Q3U381) Zinc finger protein 692|
          Length = 531

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 21/78 (26%), Positives = 29/78 (37%)
 Frame = +2

Query: 206 CRQKCRVEGIVYDKHIQKSQRASNPLQCSQKADSEQESEERGIAFERKLDVDGSYWKPKT 385
           C Q+ R +     + +        PL   Q  + E+E EE     E +L  D S W   +
Sbjct: 161 CEQRERTQETRLSRRVDSPLEIDPPLGEDQDVEEEEEEEEE----EEELLSDASPWTYSS 216

Query: 386 YPKTSWVAAKGPPIDPST 439
            P  S      PP  P T
Sbjct: 217 SPDDSEPDVPRPPPSPVT 234

>SIAL_HUMAN (P21815) Bone sialoprotein-2 precursor (Bone sialoprotein II) (BSP|
           II) (Cell-binding sialoprotein) (Integrin-binding
           sialoprotein)
          Length = 317

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 12/50 (24%), Positives = 27/50 (54%)
 Frame = +2

Query: 377 PKTYPKTSWVAAKGPPIDPSTLIGFACKISYSSDESFDSNYKLFKNQSGE 526
           P+ Y  TS      PP   +T + +  +  Y+    +D+ Y+++++++GE
Sbjct: 241 PQVYRTTS------PPFGKTTTVEYEGEYEYTGANDYDNGYEIYESENGE 284

>ATS16_MOUSE (Q69Z28) ADAMTS-16 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 16) (ADAM-TS
            16) (ADAM-TS16)
          Length = 1222

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = +2

Query: 284  QCSQKADSEQESEERGIAFERKLDVDGSYWKPKTYPKTSWVAAKGPPIDPSTLIG 448
            +CS      + + + G   + K+ V+ S+  PKT P T  V  K  P   S  +G
Sbjct: 878  ECSVSCGGGKMNSKAGCYRDLKVPVNASFCNPKTRPVTGLVPCKVSPCPSSWSVG 932

>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 952

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +2

Query: 239 YDKHIQKSQRASNPLQCSQKADSEQESEERGIAFERKLDVDGSY 370
           + KH QKS +   P Q S  +D++++ +++G +   KL  D  +
Sbjct: 89  WSKHAQKSSQPKQPSQDSVPSDTKKDKKKKGPSDLEKLKEDAKF 132

>B3G2P_DROME (Q9VTG7) Galactosylgalactosylxylosylprotein|
           3-beta-glucuronosyltransferase P (EC 2.4.1.135)
           (Beta-1,3-glucuronyltransferase P)
           (Glucuronosyltransferase-P) (GlcAT-P)
           (UDP-glucuronosyltransferase-P) (DmGlcAT-BSII)
          Length = 479

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = -3

Query: 445 Y*SGWINGRPFSSYP*GFGVSLRFPV*SINVQFPLEGNASFLGFL 311
           Y  GWI GR +     GF VS++F     N Q P +      GFL
Sbjct: 378 YYDGWIGGRKYPVDMAGFAVSVKFLKERPNAQMPFKPGYEEDGFL 422

>ATS16_HUMAN (Q8TE57) ADAMTS-16 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 16) (ADAM-TS
            16) (ADAM-TS16)
          Length = 1224

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 17/55 (30%), Positives = 23/55 (41%)
 Frame = +2

Query: 284  QCSQKADSEQESEERGIAFERKLDVDGSYWKPKTYPKTSWVAAKGPPIDPSTLIG 448
            +CS      Q +   G   + K  V+ S+  PKT P T  V  K     PS  +G
Sbjct: 880  ECSVSCGGGQMTVREGCYRDLKFQVNMSFCNPKTRPVTGLVPCKVSACPPSWSVG 934


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,288,732
Number of Sequences: 219361
Number of extensions: 1822385
Number of successful extensions: 5045
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5044
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5481822624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)