ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd24n11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-B Length = 738 Score = 254 bits (128), Expect = 6e-65 Identities = 137/141 (97%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 444 ctgtcttacttgccacccctctccacggaggccctcctgaagcaggtcgactacctgatc 503 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 504 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 563 Query: 124 aacagctcccccgggtactac 144 ||||||||||||||||||||| Sbjct: 564 aacagctcccccgggtactac 584
>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-B Length = 787 Score = 254 bits (128), Expect = 6e-65 Identities = 137/141 (97%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 459 ctgtcttacttgccacccctctccacggaggccctcctgaagcaggtcgactacctgatc 518 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 519 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 578 Query: 124 aacagctcccccgggtactac 144 ||||||||||||||||||||| Sbjct: 579 aacagctcccccgggtactac 599
>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Agr-A Length = 604 Score = 254 bits (128), Expect = 6e-65 Identities = 137/141 (97%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 276 ctgtcttacttgccacccctctccacggaggccctcctgaagcaggtcgactacctgatc 335 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 336 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 395 Query: 124 aacagctcccccgggtactac 144 ||||||||||||||||||||| Sbjct: 396 aacagctcccccgggtactac 416
>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 Score = 246 bits (124), Expect = 2e-62 Identities = 136/141 (96%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 251 ctgtcttacttgccacccctctccacggaggccctcctgaagcaggtcgactacctgatc 310 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 311 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 370 Query: 124 aacagctcccccgggtactac 144 |||| |||||||||||||||| Sbjct: 371 aacaactcccccgggtactac 391
>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-B Length = 789 Score = 246 bits (124), Expect = 2e-62 Identities = 136/141 (96%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 461 ctgtcttacttgccacccctctccacggaggccctcctgaagcaggtcgactacctgatc 520 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 521 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 580 Query: 124 aacagctcccccgggtactac 144 |||||||| |||||||||||| Sbjct: 581 aacagctctcccgggtactac 601
>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-B Length = 787 Score = 246 bits (124), Expect = 2e-62 Identities = 136/141 (96%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| Sbjct: 459 ctgtcttacttgccacccctctccacggaagccctcctgaagcaggtcgactacctgatc 518 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 519 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 578 Query: 124 aacagctcccccgggtactac 144 ||||||||||||||||||||| Sbjct: 579 aacagctcccccgggtactac 599
>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Hor-A Length = 605 Score = 246 bits (124), Expect = 2e-62 Identities = 136/141 (96%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||| Sbjct: 277 ctgtcttacttgccacccctcaccacggaggccctcctgaagcaggttgactacctgatc 336 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 337 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 396 Query: 124 aacagctcccccgggtactac 144 ||||||||||||||||||||| Sbjct: 397 aacagctcccccgggtactac 417
>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-A Length = 607 Score = 246 bits (124), Expect = 2e-62 Identities = 136/141 (96%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 279 ctgtcttacttgccacccctctccacggaggccctcctgaagcaggtcgactacctgatc 338 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 339 cgctcaaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 398 Query: 124 aacagctcccccgggtactac 144 ||||||||||||||||||||| Sbjct: 399 aacagctcccccgggtactac 419
>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-A Length = 611 Score = 246 bits (124), Expect = 2e-62 Identities = 136/141 (96%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 283 ctgtcttacttgccacccctctccacggaggccctcctgaagcaggtcgactacctgatc 342 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 343 cgctcaaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 402 Query: 124 aacagctcccccgggtactac 144 ||||||||||||||||||||| Sbjct: 403 aacagctcccccgggtactac 423
>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-A Length = 605 Score = 246 bits (124), Expect = 2e-62 Identities = 136/141 (96%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 277 ctgtcttacttgccacccctctccacggaggccctcctaaagcaggtcgactacctgatc 336 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 337 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 396 Query: 124 aacagctcccccgggtactac 144 ||||||||||||||||||||| Sbjct: 397 aacagctcccccgggtactac 417
>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-A Length = 604 Score = 246 bits (124), Expect = 2e-62 Identities = 136/141 (96%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 276 ctgtcttacttgccacccctctccacggaggccctcctgaagcaggtcgactacctgatc 335 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 336 cgctcaaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 395 Query: 124 aacagctcccccgggtactac 144 ||||||||||||||||||||| Sbjct: 396 aacagctcccccgggtactac 416
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 Score = 246 bits (124), Expect = 2e-62 Identities = 136/141 (96%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 919 ctgtcttacttgccacccctctccacggaggccctcctgaagcaggtcgactacctgatc 978 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 979 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 1038 Query: 124 aacagctcccccgggtactac 144 ||||||||| ||||||||||| Sbjct: 1039 aacagctcctccgggtactac 1059 Score = 165 bits (83), Expect = 5e-38 Identities = 125/140 (89%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||||||||||||||||||| ||||||||||| | ||| || |||||||||| Sbjct: 5323 ctgtcttacttgccacccctctccatagaggccctccttacgcaggtcaactacctgatc 5382 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 5383 cgctccaagtgggtgccctgcctcgacttcagcaaggtcagcttcgtcttccgtgagcac 5442 Query: 124 aacagctcccccgggtacta 143 || | |||||| |||||||| Sbjct: 5443 aataactcccctgggtacta 5462 Score = 127 bits (64), Expect = 1e-26 Identities = 115/133 (86%) Strand = Plus / Plus Query: 11 acttgccacccctctccacggaggccctcctgaagcangtggactacctgatncgctcca 70 |||||||| ||||||||| |||||||||||| ||||| || ||||||||||| | ||||| Sbjct: 3987 acttgccatccctctccatggaggccctcctcaagcaggtcgactacctgatcccctcca 4046 Query: 71 agtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcacaacagct 130 |||| |||||||||||||||||||| || |||||||| | || ||||||| ||| || | Sbjct: 4047 agtgagtgccctgcctcgagttcagtaacattggcttcatattccgtgagcgcaataggt 4106 Query: 131 cccccgggtacta 143 |||| |||||||| Sbjct: 4107 cccctgggtacta 4119
>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p13-1 Length = 985 Score = 246 bits (124), Expect = 2e-62 Identities = 141/148 (95%) Strand = Plus / Plus Query: 1 actctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctg 60 ||||||||||||||||||||||||||||||||||||||||||||||| || |||||| || Sbjct: 638 actctgtcttacttgccacccctctccacggaggccctcctgaagcaggtcgactacttg 697 Query: 61 atncgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgag 120 || ||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 698 atccgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgttttccgtgag 757 Query: 121 cacaacagctcccccgggtactacnatg 148 |||||||||||||||||||||||| ||| Sbjct: 758 cacaacagctcccccgggtactacgatg 785
>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase Small subunit, complete cds, clone:p6-1 Length = 638 Score = 246 bits (124), Expect = 2e-62 Identities = 136/141 (96%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 294 ctgtcttacttgccacccctctccacggaggccctcctgaagcaggtcgactacctgatc 353 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 354 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 413 Query: 124 aacagctcccccgggtactac 144 ||||||||| ||||||||||| Sbjct: 414 aacagctcctccgggtactac 434
>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B2 Length = 781 Score = 244 bits (123), Expect = 6e-62 Identities = 135/140 (96%) Strand = Plus / Plus Query: 5 tgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatnc 64 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| | Sbjct: 454 tgtcttacttgccacccctctccacggaagccctcctgaagcaggtcgactacctgatcc 513 Query: 65 gctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcaca 124 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcaca 573 Query: 125 acagctcccccgggtactac 144 |||||||||||||||||||| Sbjct: 574 acagctcccccgggtactac 593
>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-B Length = 792 Score = 240 bits (121), Expect = 1e-60 Identities = 138/145 (95%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| Sbjct: 464 ctgtcttacttgccacccctctccacggaagccctcctgaagcaggtcgactacctgatc 523 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 524 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 583 Query: 124 aacagctcccccgggtactacnatg 148 |||||||||||||| |||||| ||| Sbjct: 584 aacagctcccccggatactacgatg 608
>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-B Length = 792 Score = 240 bits (121), Expect = 1e-60 Identities = 138/145 (95%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| Sbjct: 464 ctgtcttacttgccacccctctccacggaagccctcctgaagcaggtcgactacctgatc 523 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 524 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 583 Query: 124 aacagctcccccgggtactacnatg 148 |||||||||||||| |||||| ||| Sbjct: 584 aacagctcccccggatactacgatg 608
>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, complete cds Length = 779 Score = 238 bits (120), Expect = 4e-60 Identities = 135/141 (95%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||||||||||||| ||||||| || |||||| |||| Sbjct: 241 ctgtcttacttgccacccctctccacggaggccctcttgaagcaggtcgactacttgatc 300 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 301 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 360 Query: 124 aacagctcccccgggtactac 144 ||||||||||||||||||||| Sbjct: 361 aacagctcccccgggtactac 381
>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ura-B Length = 787 Score = 238 bits (120), Expect = 4e-60 Identities = 135/141 (95%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| Sbjct: 459 ctgtcttacttgccacccctctccacggaagccctcctgaagcaggtcgactacctgatc 518 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 519 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 578 Query: 124 aacagctcccccgggtactac 144 |||||||||||||||||||| Sbjct: 579 tacagctcccccgggtactac 599
>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-B Length = 783 Score = 238 bits (120), Expect = 4e-60 Identities = 135/141 (95%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| Sbjct: 460 ctgtcttacttgccacccctctccacggaagccctcctgaagcaggtcgactacctgatc 519 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 520 cgctccaagtgggtgccctgcctcgagtttagcaaggttggcttcgtcttccgtgagcac 579 Query: 124 aacagctcccccgggtactac 144 ||||||||||||||||||||| Sbjct: 580 aacagctcccccgggtactac 600
>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-A Length = 604 Score = 238 bits (120), Expect = 4e-60 Identities = 135/141 (95%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 276 ctgtcttacttgccacccctctccacggaggccctcctgaagcaggtcgactacctgatc 335 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 336 cgctcaaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 395 Query: 124 aacagctcccccgggtactac 144 |||||||||||||| |||||| Sbjct: 396 aacagctcccccggatactac 416
>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A3 Length = 605 Score = 238 bits (120), Expect = 4e-60 Identities = 135/141 (95%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 277 ctgtcttacttgccacccctctccacagaggccctcctaaagcaggtcgactacctgatc 336 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 337 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 396 Query: 124 aacagctcccccgggtactac 144 ||||||||||||||||||||| Sbjct: 397 aacagctcccccgggtactac 417
>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A2 Length = 605 Score = 238 bits (120), Expect = 4e-60 Identities = 135/141 (95%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 277 ctgtcttacttgccacccctctccacagaggccctcctaaagcaggtcgactacctgatc 336 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 337 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 396 Query: 124 aacagctcccccgggtactac 144 ||||||||||||||||||||| Sbjct: 397 aacagctcccccgggtactac 417
>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A1 Length = 605 Score = 238 bits (120), Expect = 4e-60 Identities = 135/141 (95%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 277 ctgtcttacttgccacccctctccacagaggccctcctaaagcaggtcgactacctgatc 336 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 337 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 396 Query: 124 aacagctcccccgggtactac 144 ||||||||||||||||||||| Sbjct: 397 aacagctcccccgggtactac 417
>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A3 Length = 604 Score = 238 bits (120), Expect = 4e-60 Identities = 135/141 (95%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 276 ctgtcttacttgccacccctctccacggaggccctcctgaagcaggtcgactacctgatc 335 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 336 cgctcaaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 395 Query: 124 aacagctcccccgggtactac 144 |||||||| |||||||||||| Sbjct: 396 aacagctctcccgggtactac 416
>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A2 Length = 604 Score = 238 bits (120), Expect = 4e-60 Identities = 135/141 (95%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 276 ctgtcttacttgccacccctctccacggaggccctcctgaagcaggtcgactacctgatc 335 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 336 cgctcaaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 395 Query: 124 aacagctcccccgggtactac 144 |||||||| |||||||||||| Sbjct: 396 aacagctctcccgggtactac 416
>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A1 Length = 604 Score = 238 bits (120), Expect = 4e-60 Identities = 135/141 (95%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 276 ctgtcttacttgccacccctctccacggaggccctcctgaagcaggtcgactacctgatc 335 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 336 cgctcaaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 395 Query: 124 aacagctcccccgggtactac 144 |||||||| |||||||||||| Sbjct: 396 aacagctctcccgggtactac 416
>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-A1 Length = 604 Score = 238 bits (120), Expect = 4e-60 Identities = 135/141 (95%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 276 ctgtcttacttgccacccctctccacggaggccctcctgaagcaggtcgactacctgatc 335 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 336 cgctcaaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 395 Query: 124 aacagctcccccgggtactac 144 |||||||| |||||||||||| Sbjct: 396 aacagctctcccgggtactac 416
>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 604 Score = 238 bits (120), Expect = 4e-60 Identities = 135/141 (95%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 276 ctgtcttacttgccacccctctccacggaggccctcctgaagcaggtcgactacctgatc 335 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 336 cgctcaaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 395 Query: 124 aacagctcccccgggtactac 144 |||||||| |||||||||||| Sbjct: 396 aacagctctcccgggtactac 416
>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-B Length = 728 Score = 230 bits (116), Expect = 9e-58 Identities = 131/137 (95%) Strand = Plus / Plus Query: 7 tcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatncgc 66 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| Sbjct: 403 tcttacttgccacccctctccacggaggccctcctgaagcaggtcgactacctgatccgc 462 Query: 67 tccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcacaac 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 463 tccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcacaac 522 Query: 127 agctcccccgggtacta 143 |||||||| || ||||| Sbjct: 523 agctcccctggttacta 539
>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-B Length = 772 Score = 230 bits (116), Expect = 9e-58 Identities = 134/141 (95%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||| Sbjct: 444 ctgtcttacttgccacccctatccacggaggccctcctgaagcaggtcgactacctgatc 503 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 504 cgctcaaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 563 Query: 124 aacagctcccccgggtactac 144 |||||||| |||||||||||| Sbjct: 564 aacagctctcccgggtactac 584
>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-B Length = 781 Score = 228 bits (115), Expect = 4e-57 Identities = 133/140 (95%) Strand = Plus / Plus Query: 5 tgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatnc 64 |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| | Sbjct: 454 tgtcttacttgccacccctctccacggaagccctcctgaagcaggtcgactacctgatcc 513 Query: 65 gctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcaca 124 ||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||| Sbjct: 514 gctccaagtgggtgccctgcctcgagttcagcaaggtaggcatcgtcttccgtgagcaca 573 Query: 125 acagctcccccgggtactac 144 |||||||||||||||||||| Sbjct: 574 acagctcccccgggtactac 593
>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-A Length = 605 Score = 224 bits (113), Expect = 6e-56 Identities = 136/145 (93%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||| ||||||||||| ||||| || |||||| |||| Sbjct: 277 ctgtcttacttgccacccctctccacagaggccctcctaaagcaggtcgactacttgatc 336 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 337 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 396 Query: 124 aacagctcccccgggtactacnatg 148 |||||||||||||| |||||| ||| Sbjct: 397 aacagctcccccggatactacgatg 421
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 Score = 222 bits (112), Expect = 2e-55 Identities = 133/141 (94%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||||||||||||||||||||||| |||||| |||||| || ||||||||||| Sbjct: 1165 ctgtcttacttgccacccctctccacggaagccctctcgaagcaggtcgactacctgatc 1224 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1225 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 1284 Query: 124 aacagctcccccgggtactac 144 |||||||| |||||||||||| Sbjct: 1285 aacagctctcccgggtactac 1305
>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B1 Length = 787 Score = 222 bits (112), Expect = 2e-55 Identities = 133/141 (94%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||| |||||||||| |||||||||||||||||||| || || ||||||||||| Sbjct: 459 ctgtcttacctgccacccctatccacggaggccctcctgaaacaggtcgactacctgatc 518 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 519 cgctcaaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 578 Query: 124 aacagctcccccgggtactac 144 ||||||||||||||||||||| Sbjct: 579 aacagctcccccgggtactac 599
>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-B Length = 787 Score = 222 bits (112), Expect = 2e-55 Identities = 133/141 (94%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||| |||||||||| |||||||||||||||||||| || || ||||||||||| Sbjct: 459 ctgtcttacctgccacccctatccacggaggccctcctgaaacaggtcgactacctgatc 518 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 519 cgctcaaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 578 Query: 124 aacagctcccccgggtactac 144 ||||||||||||||||||||| Sbjct: 579 aacagctcccccgggtactac 599
>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-A Length = 605 Score = 222 bits (112), Expect = 2e-55 Identities = 133/141 (94%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 277 ctgtcttacttgccacccctctccacagaggccctcctaaagcaggtagactacctgatc 336 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 337 cgctccaagtgggtgccctgcctcgagtttagcaaggttggcttcgtcttccgtgagcac 396 Query: 124 aacagctcccccgggtactac 144 |||||||| |||||||||||| Sbjct: 397 aacagctctcccgggtactac 417
>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-A Length = 605 Score = 222 bits (112), Expect = 2e-55 Identities = 133/141 (94%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 277 ctgtcttacttgccacccctctccacagaggccctcctaaagcaggtagactacctgatc 336 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 337 cgctccaagtgggtgccctgcctcgagtttagcaaggttggcttcgtcttccgtgagcac 396 Query: 124 aacagctcccccgggtactac 144 |||||||| |||||||||||| Sbjct: 397 aacagctctcccgggtactac 417
>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p10-1 Length = 629 Score = 222 bits (112), Expect = 2e-55 Identities = 133/141 (94%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 285 ctgtcttacttgccacccctctccacagaggccctcctaaagcaggtagactacctgatc 344 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 345 cgctccaagtgggtgccctgcctcgagtttagcaaggttggcttcgtcttccgtgagcac 404 Query: 124 aacagctcccccgggtactac 144 |||||||| |||||||||||| Sbjct: 405 aacagctctcccgggtactac 425
>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-A Length = 591 Score = 214 bits (108), Expect = 6e-53 Identities = 132/141 (93%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||||||||||||||||||||||| |||||| ||||||| || ||||||||||| Sbjct: 263 ctgtcttacttgccacccctctccacggaagccctcttgaagcaggtcgactacctgatc 322 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 323 cgctccaagtgggtaccctgcctcgagttcagcaaggttggcttcgtcttccgcgagcac 382 Query: 124 aacagctcccccgggtactac 144 |||||||||||||| |||||| Sbjct: 383 aacagctcccccggttactac 403
>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small subunit (rbcS gene) Length = 518 Score = 212 bits (107), Expect = 2e-52 Identities = 131/140 (93%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||| |||||||||||||||||||||||||||||||||| || |||||| |||| Sbjct: 174 ctgtcttacctgccacccctctccacggaggccctcctgaagcaggtcgactacttgatc 233 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 234 cgctccaagtgggtgccctgcctcgagttcagcaaggttggtttcgtcttccgtgagcac 293 Query: 124 aacagctcccccgggtacta 143 || ||||||||||| ||||| Sbjct: 294 aatagctcccccggatacta 313
>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bro-B Length = 784 Score = 184 bits (93), Expect = 5e-44 Identities = 114/122 (93%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 |||||||||||||||||||||||||| ||||||||||||||||| | |||||| |||| Sbjct: 456 ctgtcttacttgccacccctctccaccgaggccctcctgaagcagatcgactacttgatc 515 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 516 cgctccaagtgggtgccgtgcctcgagttcagcaaggttggcttcgtcttccgtgagcac 575 Query: 124 aa 125 || Sbjct: 576 aa 577
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 Score = 176 bits (89), Expect = 1e-41 Identities = 130/145 (89%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||||||||||| ||| |||||||||||||||| ||||| || ||||||||||| Sbjct: 270 ctgtcttacttgccaccgctcaccacggaggccctcctcaagcaggtcgactacctgatc 329 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||| Sbjct: 330 cgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcac 389 Query: 124 aacagctcccccgggtactacnatg 148 ||| || |||||||||||| ||| Sbjct: 390 aacgcgtctcccgggtactacgatg 414
>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39 ribulosebisphosphate carboxylase) clones 234 and 406 Length = 743 Score = 155 bits (78), Expect = 4e-35 Identities = 111/123 (90%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||| ||||||| ||| ||||||||||||||| ||||| || ||||||||||| Sbjct: 149 ctgtcttacctgccaccgctcagcacggaggccctcctcaagcaggtcgactacctgatc 208 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||| Sbjct: 209 cgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcac 268 Query: 124 aac 126 ||| Sbjct: 269 aac 271
>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p9-1 Length = 739 Score = 155 bits (78), Expect = 4e-35 Identities = 111/123 (90%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||| ||||||| ||| ||||||||||||||| ||||| || ||||||||||| Sbjct: 395 ctgtcttacctgccaccgctcagcacggaggccctcctcaagcaggtcgactacctgatc 454 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||| Sbjct: 455 cgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcac 514 Query: 124 aac 126 ||| Sbjct: 515 aac 517
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 Score = 147 bits (74), Expect = 1e-32 Identities = 110/123 (89%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||| | ||||| ||| ||||||||||||||| ||||| || ||||||||||| Sbjct: 204 ctgtcttaccttccaccactcagcacggaggccctccttaagcaggtcgactacctgatc 263 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||| Sbjct: 264 cgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcac 323 Query: 124 aac 126 ||| Sbjct: 324 aac 326
>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39) (ribulosebisphosphate carboxylase, clone 512) Length = 611 Score = 137 bits (69), Expect = 1e-29 Identities = 105/118 (88%) Strand = Plus / Plus Query: 8 cttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatncgct 67 ||||| ||||||| ||| ||||||||||||||| ||||| |||||||||||||| |||| Sbjct: 2 cttacctgccaccgctcagcacggaggccctcctcaagcaggtggactacctgatccgct 61 Query: 68 ccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcacaa 125 ||||||||||||| ||||| |||||||||||||| || ||| |||| ||||||||||| Sbjct: 62 ccaagtgggtgccttgccttgagttcagcaaggtcgggttcatcttccgtgagcacaa 119
>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase, small subunit Length = 837 Score = 137 bits (69), Expect = 1e-29 Identities = 125/145 (86%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||| ||||||||||| ||| |||||||| |||||| ||||| || ||||||||||| Sbjct: 230 ctgtcctacttgccaccgctcagcacggagggcctccttaagcaggtcgactacctgatc 289 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||||||||||||||||||||||||||| || |||||||| ||| |||| ||||| ||| Sbjct: 290 cgctccaagtgggtgccctgcctcgagtttagaaaggttgggttcatcttccgtgaacac 349 Query: 124 aacagctcccccgggtactacnatg 148 ||| ||||| ||||||||| ||| Sbjct: 350 aacgtatcccctgggtactacgatg 374
>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p2-1 Length = 653 Score = 137 bits (69), Expect = 1e-29 Identities = 125/145 (86%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||| ||| ||||||| ||| ||| ||||||||||| ||||| || ||||||||||| Sbjct: 309 ctgtcctacctgccaccgctcagcacagaggccctcctcaagcaggtcgactacctgatc 368 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 ||||||||||||||||| ||||||||||||||||||||||| || |||| ||||||||| Sbjct: 369 cgctccaagtgggtgccttgcctcgagttcagcaaggttgggtttatcttccgtgagcac 428 Query: 124 aacagctcccccgggtactacnatg 148 ||| ||||| ||||||||| ||| Sbjct: 429 aacgcatcccctgggtactacgatg 453
>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 593 Score = 129 bits (65), Expect = 3e-27 Identities = 124/145 (85%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||| ||||||| ||||| |||||||||||||||||| | |||| | |||| Sbjct: 258 ctgtcttacctgccaccactctcagaggaggccctcctgaagcagattgacttcttgatc 317 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||| |||||||||||||||||||||||||||||| |||| || |||||| Sbjct: 318 cgctccaagtgggttccctgcctcgagttcagcaaggttggcttcatcttccgcgagcac 377 Query: 124 aacagctcccccgggtactacnatg 148 |||| | ||||| |||||| ||| Sbjct: 378 ggcagcactcccggatactacgatg 402
>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 600 Score = 129 bits (65), Expect = 3e-27 Identities = 119/138 (86%) Strand = Plus / Plus Query: 7 tcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatncgc 66 |||||| ||||||| |||||| ||||||||||||||| || | |||| | |||| ||| Sbjct: 268 tcttacctgccaccactctccgaggaggccctcctgaaacagatcgacttcttgatccgc 327 Query: 67 tccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcacaac 126 ||||||||||| |||||||||||||||||||||||||||||| |||| || |||||| | Sbjct: 328 tccaagtgggttccctgcctcgagttcagcaaggttggcttcatcttccgcgagcacggc 387 Query: 127 agctcccccgggtactac 144 ||| ||||||| |||||| Sbjct: 388 agcacccccggatactac 405
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, nuclear gene encoding chloroplast protein, partial cds Length = 594 Score = 127 bits (64), Expect = 1e-26 Identities = 121/141 (85%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||||||||||| ||||| |||||||||||||||||| | |||| | |||| Sbjct: 259 ctgtcttacttgccaccactctctgaggaggccctcctgaagcagatcgacttcttgatc 318 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||| |||||||| ||||||||||||||||||||| |||| || | |||| Sbjct: 319 cgctccaagtgggttccctgccttgagttcagcaaggttggcttcatcttccgcgtgcac 378 Query: 124 aacagctcccccgggtactac 144 |||| ||||||| |||||| Sbjct: 379 ggcagcacccccggatactac 399
>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 586 Score = 121 bits (61), Expect = 6e-25 Identities = 118/138 (85%) Strand = Plus / Plus Query: 7 tcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatncgc 66 |||||||||||||| ||||| |||||||||||| ||||| | |||| | |||| ||| Sbjct: 254 tcttacttgccaccactctcagaggaggccctcctaaagcagatcgacttcttgatccgc 313 Query: 67 tccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcacaac 126 ||||||||||| |||||||| ||||||||||||||||||||| |||| || |||||| | Sbjct: 314 tccaagtgggttccctgccttgagttcagcaaggttggcttcatcttccgcgagcacggc 373 Query: 127 agctcccccgggtactac 144 ||| ||||||| |||||| Sbjct: 374 agcacccccggatactac 391
>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 121 bits (61), Expect = 6e-25 Identities = 118/138 (85%) Strand = Plus / Plus Query: 7 tcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatncgc 66 |||||||||||||| ||||| |||||||||||||||||| | |||| | |||| ||| Sbjct: 172 tcttacttgccaccactctcggaggaggccctcctgaagcagatcgacttcttgatccgc 231 Query: 67 tccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcacaac 126 ||||||||||| |||||||| ||||||||||||||||||||| |||| || |||||| | Sbjct: 232 tccaagtgggttccctgcctggagttcagcaaggttggcttcatcttccgcgagcacggc 291 Query: 127 agctcccccgggtactac 144 ||| | ||||| |||||| Sbjct: 292 agcactcccggatactac 309
>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 121 bits (61), Expect = 6e-25 Identities = 118/138 (85%) Strand = Plus / Plus Query: 7 tcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatncgc 66 |||||||||||||| ||||| |||||||||||||||||| | |||| | |||| ||| Sbjct: 172 tcttacttgccaccactctcggaggaggccctcctgaagcagatcgacttcttgatccgc 231 Query: 67 tccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcacaac 126 ||||||||||| |||||||| ||||||||||||||||||||| |||| || |||||| | Sbjct: 232 tccaagtgggttccctgcctggagttcagcaaggttggcttcatcttccgcgagcacggc 291 Query: 127 agctcccccgggtactac 144 ||| | ||||| |||||| Sbjct: 292 agcactcccggatactac 309
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 121 bits (61), Expect = 6e-25 Identities = 118/138 (85%) Strand = Plus / Plus Query: 7 tcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatncgc 66 |||||| ||||||| ||||| |||||||||||||||||| | |||| | |||| ||| Sbjct: 172 tcttacctgccaccactctcagaggaggccctcctgaagcagatcgacttcttgatccgc 231 Query: 67 tccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcacaac 126 ||||||||||| |||||||| ||||||||||||||||||||| |||| || |||||| | Sbjct: 232 tccaagtgggttccctgccttgagttcagcaaggttggcttcatcttccgcgagcacggc 291 Query: 127 agctcccccgggtactac 144 ||| ||||||| |||||| Sbjct: 292 agcacccccggatactac 309
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 121 bits (61), Expect = 6e-25 Identities = 118/138 (85%) Strand = Plus / Plus Query: 7 tcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatncgc 66 |||||||||||||| ||||| |||||||||||||||||| | |||| | |||| ||| Sbjct: 172 tcttacttgccaccactctcggaggaggccctcctgaagcagatcgacttcttgatccgc 231 Query: 67 tccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcacaac 126 ||||||||||| |||||||| ||||||||||||||||||||| |||| || |||||| | Sbjct: 232 tccaagtgggttccctgcctggagttcagcaaggttggcttcatcttccgcgagcacggc 291 Query: 127 agctcccccgggtactac 144 ||| | ||||| |||||| Sbjct: 292 agcactcccggatactac 309
>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 620 Score = 119 bits (60), Expect = 2e-24 Identities = 120/141 (85%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||| ||||||| || || |||||||||||||||||| | |||| | |||| Sbjct: 285 ctgtcttacctgccaccactgtcagaggaggccctcctgaagcagatcgacttcttgatc 344 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||| |||||||||||||||||||||||||||||| |||| || |||||| Sbjct: 345 cgctccaagtgggttccctgcctcgagttcagcaaggttggcttcatcttccgcgagcac 404 Query: 124 aacagctcccccgggtactac 144 |||| | ||||| |||||| Sbjct: 405 ggcagcactcccggatactac 425
>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 119 bits (60), Expect = 2e-24 Identities = 120/141 (85%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||| ||||||| || || |||||||||||||||||| | |||| | |||| Sbjct: 169 ctgtcttacctgccaccactgtcagaggaggccctcctgaagcagatcgacttcttgatc 228 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||| |||||||||||||||||||||||||||||| |||| || |||||| Sbjct: 229 cgctccaagtgggttccctgcctcgagttcagcaaggttggcttcatcttccgcgagcac 288 Query: 124 aacagctcccccgggtactac 144 |||| | ||||| |||||| Sbjct: 289 ggcagcactcccggatactac 309
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 119 bits (60), Expect = 2e-24 Identities = 120/141 (85%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||| ||||||| ||||| |||||||||||||||||| | |||| | |||| Sbjct: 169 ctgtcttacctgccaccactctcagaggaggccctcctgaagcagatcgacttcttgatc 228 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||| |||||||| ||||||||||||||||||||| |||| || |||||| Sbjct: 229 cgctccaagtgggttccctgcctggagttcagcaaggttggcttcatcttccgcgagcac 288 Query: 124 aacagctcccccgggtactac 144 |||| | ||||| |||||| Sbjct: 289 ggcagcactcccggatactac 309
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 119 bits (60), Expect = 2e-24 Identities = 120/141 (85%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||| ||||||| ||||| |||||||||||||||||| | |||| | |||| Sbjct: 169 ctgtcttacctgccaccactctcagaggaggccctcctgaagcagatcgacttcttgatc 228 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||| |||||||| |||||||||||||| |||||| |||| || |||||| Sbjct: 229 cgctccaagtgggttccctgccttgagttcagcaaggtgggcttcatcttccgcgagcac 288 Query: 124 aacagctcccccgggtactac 144 |||| ||||||| |||||| Sbjct: 289 ggcagcacccccggatactac 309
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 119 bits (60), Expect = 2e-24 Identities = 120/141 (85%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||| ||||||| ||||| |||||||||||||||||| | |||| | |||| Sbjct: 169 ctgtcttacctgccaccactctcagaggaggccctcctgaagcagatcgacttcttgatc 228 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||| |||||||| ||||||||||||||||||||| |||| || |||||| Sbjct: 229 cgctccaagtgggttccctgcctggagttcagcaaggttggcttcatcttccgcgagcac 288 Query: 124 aacagctcccccgggtactac 144 |||| | ||||| |||||| Sbjct: 289 ggcagcactcccggatactac 309
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 119 bits (60), Expect = 2e-24 Identities = 120/141 (85%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||| ||||||| || || |||||||||||||||||| | |||| | |||| Sbjct: 169 ctgtcttacctgccaccactgtcagaggaggccctcctgaagcagatcgacttcttgatc 228 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||| |||||||||||||||||||||||||||||| |||| || |||||| Sbjct: 229 cgctccaagtgggttccctgcctcgagttcagcaaggttggcttcatcttccgcgagcac 288 Query: 124 aacagctcccccgggtactac 144 |||| | ||||| |||||| Sbjct: 289 ggcagcactcccggatactac 309
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 111 bits (56), Expect = 6e-22 Identities = 96/110 (87%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||| ||||||| ||||| |||||||||||||||||| | |||| | |||| Sbjct: 169 ctgtcttacctgccaccactctcagaggaggccctcctgaagcagatcgacttcttgatc 228 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtctt 113 |||||||||||||| |||||||| ||||||||||||||||||||| |||| Sbjct: 229 cgctccaagtgggttccctgcctggagttcagcaaggttggcttcatctt 278
>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 111 bits (56), Expect = 6e-22 Identities = 119/141 (84%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||| ||||||| ||||| |||||||||||||||||| | || | | |||| Sbjct: 169 ctgtcttacctgccaccactctcagaggaggccctcctgaagcagatcgaattcttgatc 228 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||| |||||||| ||||||||||||||||||||| |||| || |||||| Sbjct: 229 cgctccaagtgggttccctgcctggagttcagcaaggttggcttcatcttccgcgagcac 288 Query: 124 aacagctcccccgggtactac 144 |||| | ||||| |||||| Sbjct: 289 ggcagcactcccggatactac 309
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 111 bits (56), Expect = 6e-22 Identities = 119/141 (84%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||| |||| || ||||| |||||||||||||||||| | |||| | |||| Sbjct: 169 ctgtcttacctgccgccactctcagaggaggccctcctgaagcagatcgacttcttgatc 228 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||| || ||||||||||||||||||||||||||| |||| || |||||| Sbjct: 229 cgctccaagtgggttccttgcctcgagttcagcaaggttggcttcatcttccgcgagcac 288 Query: 124 aacagctcccccgggtactac 144 |||| | ||||| |||||| Sbjct: 289 ggcagcactcccggatactac 309
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 109 bits (55), Expect = 2e-21 Identities = 102/119 (85%) Strand = Plus / Minus Query: 30 ggaggccctcctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcga 89 ||||| |||||||||||| | || |||||| | || ||||||||||||||||||||||| Sbjct: 10080088 ggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcctcga 10080029 Query: 90 gttcagcaaggttggcttcgtcttncgtgagcacaacagctcccccgggtactacnatg 148 |||||||||||| || ||||||| |||||| || |||| |||||||| |||||| ||| Sbjct: 10080028 gttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacgatg 10079970 Score = 97.6 bits (49), Expect = 9e-18 Identities = 82/94 (87%) Strand = Plus / Plus Query: 55 tacctgatncgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttn 114 |||||| | || |||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 11262018 tacctgcttcgatccaagtgggtgccttgcctcgagttcagcaaggttggattcgtctac 11262077 Query: 115 cgtgagcacaacagctcccccgggtactacnatg 148 |||||| || |||| || |||||||||||| ||| Sbjct: 11262078 cgtgagaaccacaggtctcccgggtactacgatg 11262111 Score = 56.0 bits (28), Expect = 3e-05 Identities = 91/113 (80%) Strand = Plus / Plus Query: 31 gaggccctcctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcgag 90 |||| |||| ||||||| | || |||||| | || ||||| |||||||| ||||||||| Sbjct: 11276657 gaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgccttgcctcgag 11276716 Query: 91 ttcagcaaggttggcttcgtcttncgtgagcacaacagctcccccgggtacta 143 || || ||||| || ||||||| |||||| || |||| || || |||||||| Sbjct: 11276717 tttagtaaggtcgggttcgtctaccgtgagaaccacaggtctcctgggtacta 11276769 Score = 48.1 bits (24), Expect = 0.007 Identities = 44/51 (86%) Strand = Plus / Plus Query: 70 aagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgag 120 ||||||||||| ||| | |||||||||||||| || ||||||| |||||| Sbjct: 11319843 aagtgggtgccttgcttggagttcagcaaggtcggattcgtctaccgtgag 11319893
>dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full insert sequence Length = 984 Score = 109 bits (55), Expect = 2e-21 Identities = 102/119 (85%) Strand = Plus / Plus Query: 30 ggaggccctcctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcga 89 ||||| |||||||||||| | || |||||| | || ||||||||||||||||||||||| Sbjct: 420 ggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcctcga 479 Query: 90 gttcagcaaggttggcttcgtcttncgtgagcacaacagctcccccgggtactacnatg 148 |||||||||||| || ||||||| |||||| || |||| |||||||| |||||| ||| Sbjct: 480 gttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacgatg 538
>dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full insert sequence Length = 828 Score = 109 bits (55), Expect = 2e-21 Identities = 102/119 (85%) Strand = Plus / Plus Query: 30 ggaggccctcctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcga 89 ||||| |||||||||||| | || |||||| | || ||||||||||||||||||||||| Sbjct: 266 ggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcctcga 325 Query: 90 gttcagcaaggttggcttcgtcttncgtgagcacaacagctcccccgggtactacnatg 148 |||||||||||| || ||||||| |||||| || |||| |||||||| |||||| ||| Sbjct: 326 gttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacgatg 384
>dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full insert sequence Length = 2409 Score = 109 bits (55), Expect = 2e-21 Identities = 102/119 (85%) Strand = Plus / Plus Query: 30 ggaggccctcctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcga 89 ||||| |||||||||||| | || |||||| | || ||||||||||||||||||||||| Sbjct: 267 ggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcctcga 326 Query: 90 gttcagcaaggttggcttcgtcttncgtgagcacaacagctcccccgggtactacnatg 148 |||||||||||| || ||||||| |||||| || |||| |||||||| |||||| ||| Sbjct: 327 gttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacgatg 385
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 109 bits (55), Expect = 2e-21 Identities = 103/120 (85%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||| ||||||| ||| | |||||||||||||||||| | |||| | |||| Sbjct: 169 ctgtcttacctgccaccactcacagaggaggccctcctgaagcagatcgacttcttgatc 228 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||| |||||||| ||||||||||||||||||||| |||| || |||||| Sbjct: 229 cgctccaagtgggttccctgcctggagttcagcaaggttggcttcatcttccgcgagcac 288
>dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full insert sequence Length = 830 Score = 109 bits (55), Expect = 2e-21 Identities = 102/119 (85%) Strand = Plus / Plus Query: 30 ggaggccctcctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcga 89 ||||| |||||||||||| | || |||||| | || ||||||||||||||||||||||| Sbjct: 269 ggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcctcga 328 Query: 90 gttcagcaaggttggcttcgtcttncgtgagcacaacagctcccccgggtactacnatg 148 |||||||||||| || ||||||| |||||| || |||| |||||||| |||||| ||| Sbjct: 329 gttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacgatg 387
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 109 bits (55), Expect = 2e-21 Identities = 102/119 (85%) Strand = Plus / Minus Query: 30 ggaggccctcctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcga 89 ||||| |||||||||||| | || |||||| | || ||||||||||||||||||||||| Sbjct: 10079973 ggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcctcga 10079914 Query: 90 gttcagcaaggttggcttcgtcttncgtgagcacaacagctcccccgggtactacnatg 148 |||||||||||| || ||||||| |||||| || |||| |||||||| |||||| ||| Sbjct: 10079913 gttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacgatg 10079855 Score = 97.6 bits (49), Expect = 9e-18 Identities = 82/94 (87%) Strand = Plus / Plus Query: 55 tacctgatncgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttn 114 |||||| | || |||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 11261689 tacctgcttcgatccaagtgggtgccttgcctcgagttcagcaaggttggattcgtctac 11261748 Query: 115 cgtgagcacaacagctcccccgggtactacnatg 148 |||||| || |||| || |||||||||||| ||| Sbjct: 11261749 cgtgagaaccacaggtctcccgggtactacgatg 11261782 Score = 56.0 bits (28), Expect = 3e-05 Identities = 91/113 (80%) Strand = Plus / Plus Query: 31 gaggccctcctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcgag 90 |||| |||| ||||||| | || |||||| | || ||||| |||||||| ||||||||| Sbjct: 11276328 gaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgccttgcctcgag 11276387 Query: 91 ttcagcaaggttggcttcgtcttncgtgagcacaacagctcccccgggtacta 143 || || ||||| || ||||||| |||||| || |||| || || |||||||| Sbjct: 11276388 tttagtaaggtcgggttcgtctaccgtgagaaccacaggtctcctgggtacta 11276440 Score = 48.1 bits (24), Expect = 0.007 Identities = 44/51 (86%) Strand = Plus / Plus Query: 70 aagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgag 120 ||||||||||| ||| | |||||||||||||| || ||||||| |||||| Sbjct: 11319514 aagtgggtgccttgcttggagttcagcaaggtcggattcgtctaccgtgag 11319564
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 109 bits (55), Expect = 2e-21 Identities = 102/119 (85%) Strand = Plus / Plus Query: 30 ggaggccctcctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcga 89 ||||| |||||||||||| | || |||||| | || ||||||||||||||||||||||| Sbjct: 82533 ggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcctcga 82592 Query: 90 gttcagcaaggttggcttcgtcttncgtgagcacaacagctcccccgggtactacnatg 148 |||||||||||| || ||||||| |||||| || |||| |||||||| |||||| ||| Sbjct: 82593 gttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacgatg 82651
>dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS1139 Length = 830 Score = 109 bits (55), Expect = 2e-21 Identities = 102/119 (85%) Strand = Plus / Plus Query: 30 ggaggccctcctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcga 89 ||||| |||||||||||| | || |||||| | || ||||||||||||||||||||||| Sbjct: 264 ggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcctcga 323 Query: 90 gttcagcaaggttggcttcgtcttncgtgagcacaacagctcccccgggtactacnatg 148 |||||||||||| || ||||||| |||||| || |||| |||||||| |||||| ||| Sbjct: 324 gttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacgatg 382
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ave-A Length = 590 Score = 107 bits (54), Expect = 9e-21 Identities = 99/115 (86%) Strand = Plus / Plus Query: 30 ggaggccctcctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcga 89 |||||||||| ||||||| | |||| |||||| |||||||||||||| |||||||| || Sbjct: 288 ggaggccctcttgaagcagatcgacttcctgatccgctccaagtgggttccctgcctgga 347 Query: 90 gttcagcaaggttggcttcgtcttncgtgagcacaacagctcccccgggtactac 144 |||||||||||| |||||| |||| ||||||||| |||| | ||||| |||||| Sbjct: 348 gttcagcaaggtgggcttcatcttccgtgagcacggcagcactcccggatactac 402
>gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 835 Score = 101 bits (51), Expect = 6e-19 Identities = 93/108 (86%) Strand = Plus / Plus Query: 30 ggaggccctcctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcga 89 ||||| |||||||||||| | || |||||| | || ||||||||||||||||||||||| Sbjct: 255 ggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcctcga 314 Query: 90 gttcagcaaggttggcttcgtcttncgtgagcacaacagctcccccgg 137 |||||||||||| || ||||||| |||||| || |||| |||||||| Sbjct: 315 gttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccgg 362
>gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 854 Score = 99.6 bits (50), Expect = 2e-18 Identities = 118/142 (83%) Strand = Plus / Plus Query: 7 tcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatncgc 66 |||||| ||||||| ||| || ||||| |||||||||||| | || ||||| | || Sbjct: 269 tcttacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctcctccgt 328 Query: 67 tccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcacaac 126 ||||||||||||||||||||||||||||||||||| || || |||| |||||| || || Sbjct: 329 tccaagtgggtgccctgcctcgagttcagcaaggtcggatttgtctaccgtgagaaccac 388 Query: 127 agctcccccgggtactacnatg 148 || |||||||| |||||| ||| Sbjct: 389 agatcccccggatactacgatg 410
>gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 860 Score = 97.6 bits (49), Expect = 9e-18 Identities = 82/94 (87%) Strand = Plus / Plus Query: 55 tacctgatncgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttn 114 |||||| | || |||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 286 tacctgcttcgatccaagtgggtgccttgcctcgagttcagcaaggttggattcgtctac 345 Query: 115 cgtgagcacaacagctcccccgggtactacnatg 148 |||||| || |||| || |||||||||||| ||| Sbjct: 346 cgtgagaaccacaggtctcccgggtactacgatg 379
>dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full insert sequence Length = 899 Score = 97.6 bits (49), Expect = 9e-18 Identities = 82/94 (87%) Strand = Plus / Plus Query: 55 tacctgatncgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttn 114 |||||| | || |||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 303 tacctgcttcgatccaagtgggtgccttgcctcgagttcagcaaggttggattcgtctac 362 Query: 115 cgtgagcacaacagctcccccgggtactacnatg 148 |||||| || |||| || |||||||||||| ||| Sbjct: 363 cgtgagaaccacaggtctcccgggtactacgatg 396
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 97.6 bits (49), Expect = 9e-18 Identities = 82/94 (87%) Strand = Plus / Minus Query: 55 tacctgatncgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttn 114 |||||| | || |||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 110036 tacctgcttcgatccaagtgggtgccttgcctcgagttcagcaaggttggattcgtctac 109977 Query: 115 cgtgagcacaacagctcccccgggtactacnatg 148 |||||| || |||| || |||||||||||| ||| Sbjct: 109976 cgtgagaaccacaggtctcccgggtactacgatg 109943 Score = 56.0 bits (28), Expect = 3e-05 Identities = 91/113 (80%) Strand = Plus / Minus Query: 31 gaggccctcctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcgag 90 |||| |||| ||||||| | || |||||| | || ||||| |||||||| ||||||||| Sbjct: 95397 gaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgccttgcctcgag 95338 Query: 91 ttcagcaaggttggcttcgtcttncgtgagcacaacagctcccccgggtacta 143 || || ||||| || ||||||| |||||| || |||| || || |||||||| Sbjct: 95337 tttagtaaggtcgggttcgtctaccgtgagaaccacaggtctcctgggtacta 95285 Score = 48.1 bits (24), Expect = 0.007 Identities = 44/51 (86%) Strand = Plus / Minus Query: 70 aagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgag 120 ||||||||||| ||| | |||||||||||||| || ||||||| |||||| Sbjct: 52211 aagtgggtgccttgcttggagttcagcaaggtcggattcgtctaccgtgag 52161
>gb|AY693395.1| Lolium perenne ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 195 Score = 89.7 bits (45), Expect = 2e-15 Identities = 96/114 (84%) Strand = Plus / Plus Query: 7 tcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatncgc 66 |||||| ||||||| ||||| | ||||||||||||||||| | |||| |||| ||| Sbjct: 4 tcttacctgccaccgctctcggccgaggccctcctgaagcagatcgactttttgatccgc 63 Query: 67 tccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgag 120 ||||| ||||| |||||| | ||||||||||||||||||||| |||| |||||| Sbjct: 64 tccaaatgggttccctgcttggagttcagcaaggttggcttcatcttccgtgag 117
>dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS2106 Length = 895 Score = 89.7 bits (45), Expect = 2e-15 Identities = 81/94 (86%) Strand = Plus / Plus Query: 55 tacctgatncgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttn 114 |||||| | || |||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 301 tacctgcttcgatccaagtgggtgccttgcctcgagttcagcaaggttggattcgtctac 360 Query: 115 cgtgagcacaacagctcccccgggtactacnatg 148 || ||| || |||| || |||||||||||| ||| Sbjct: 361 cgcgagaaccacaggtctcccgggtactacgatg 394
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 504 Score = 85.7 bits (43), Expect = 3e-14 Identities = 100/120 (83%) Strand = Plus / Plus Query: 4 ctgtcttacttgccacccctctccacggaggccctcctgaagcangtggactacctgatn 63 ||||||||| ||||||| ||| | |||||||||||||||||| | |||| | |||| Sbjct: 169 ctgtcttacctgccaccactcacagaggaggccctcctgaagcagatcgacttcttgatc 228 Query: 64 cgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcac 123 |||||||||||||| || ||||||||||||||| | | ||||||| |||| || |||||| Sbjct: 229 cgctccaagtgggttccttgcctcgagttcagccaaggtggcttcatcttccgcgagcac 288
>gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate carboxylase/oxygenase (rbcS) mRNA, complete cds Length = 808 Score = 83.8 bits (42), Expect = 1e-13 Identities = 64/72 (88%) Strand = Plus / Plus Query: 30 ggaggccctcctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcga 89 ||||| |||||||||||| | || |||||| | || ||||||||||||||||||||||| Sbjct: 244 ggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcctcga 303 Query: 90 gttcagcaaggt 101 |||||||||||| Sbjct: 304 gttcagcaaggt 315
>gb|M86717.1|SCFBCS1A Saccharum hybrid cultivar H32-8560 ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit gene, complete cds Length = 2328 Score = 81.8 bits (41), Expect = 5e-13 Identities = 63/71 (88%) Strand = Plus / Plus Query: 40 ctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcgagttcagcaag 99 |||||||| |||||||||||| | ||| ||| ||||||||||||||||||||||||||| Sbjct: 1483 ctgaagcaggtggactacctgctgcgcaacaactgggtgccctgcctcgagttcagcaag 1542 Query: 100 gttggcttcgt 110 | |||||||| Sbjct: 1543 gaaggcttcgt 1553
>gb|AF017363.1|AF017363 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 918 Score = 81.8 bits (41), Expect = 5e-13 Identities = 80/94 (85%) Strand = Plus / Plus Query: 55 tacctgatncgctccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttn 114 |||||| | || |||||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 287 tacctgcttcgatccaagtgggtgccttgtctcgagttcagcaaggttgggttcgtctac 346 Query: 115 cgtgagcacaacagctcccccgggtactacnatg 148 |||||| || |||| || ||||| |||||| ||| Sbjct: 347 cgtgagaaccacaggtctcccggatactacgatg 380
>emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit (RuBPC; EC 4.1.1.39) Length = 830 Score = 58.0 bits (29), Expect = 8e-06 Identities = 60/71 (84%) Strand = Plus / Plus Query: 40 ctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcgagttcagcaag 99 |||||||| |||||||||||| | ||| | ||| | ||||||||||||||||||||| Sbjct: 285 ctgaagcaggtggactacctgctgcgcaacggctggataccctgcctcgagttcagcaag 344 Query: 100 gttggcttcgt 110 || |||||||| Sbjct: 345 gtcggcttcgt 355
>dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small subunit, complete cds Length = 830 Score = 58.0 bits (29), Expect = 8e-06 Identities = 60/71 (84%) Strand = Plus / Plus Query: 40 ctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcgagttcagcaag 99 |||||||| |||||||||||| | ||| | ||| | ||||||||||||||||||||| Sbjct: 285 ctgaagcaggtggactacctgctgcgcaacggctggataccctgcctcgagttcagcaag 344 Query: 100 gttggcttcgt 110 || |||||||| Sbjct: 345 gtcggcttcgt 355
>emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1648 Score = 56.0 bits (28), Expect = 3e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 79 ccctgcctcgagttcagcaaggttggcttcgt 110 ||||||||||||||||||||||| |||||||| Sbjct: 909 ccctgcctcgagttcagcaaggtcggcttcgt 940
>dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full insert sequence Length = 947 Score = 56.0 bits (28), Expect = 3e-05 Identities = 91/113 (80%) Strand = Plus / Plus Query: 31 gaggccctcctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcgag 90 |||| |||| ||||||| | || |||||| | || ||||| |||||||| ||||||||| Sbjct: 279 gaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgccttgcctcgag 338 Query: 91 ttcagcaaggttggcttcgtcttncgtgagcacaacagctcccccgggtacta 143 || || ||||| || ||||||| |||||| || |||| || || |||||||| Sbjct: 339 tttagtaaggtcgggttcgtctaccgtgagaaccacaggtctcctgggtacta 391
>emb|X07515.1|OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1110 Score = 54.0 bits (27), Expect = 1e-04 Identities = 63/73 (86%), Gaps = 2/73 (2%) Strand = Plus / Plus Query: 30 ggaggccctcctgaagcangtggactacct-gatncgctccaagtgggtgccctgcctcg 88 ||||| |||||||||||| | || ||||| | | || ||||||| |||||||||||||| Sbjct: 556 ggaggacctcctgaagcagatcgagtacctagctccgttccaagt-ggtgccctgcctcg 614 Query: 89 agttcagcaaggt 101 ||||||||||||| Sbjct: 615 agttcagcaaggt 627
>emb|AJ439989.1|OSA439989 Oryza sativa partial mRNA for ribulose 1,5-bisphosphate carboxylase, small subunit (rbpc-L gene) Length = 432 Score = 50.1 bits (25), Expect = 0.002 Identities = 66/82 (80%) Strand = Plus / Plus Query: 67 tccaagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgagcacaac 126 |||||| ||| ||||||||||||||||| ||||| || ||||| | ||||| || | Sbjct: 226 tccaagggggngccctgcctcgagttcaacaaggnnggattcgtttaccgtganaaccan 285 Query: 127 agctcccccgggtactacnatg 148 || |||||||| |||||| ||| Sbjct: 286 agatcccccggatactacaatg 307
>dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N11, full insert sequence Length = 845 Score = 48.1 bits (24), Expect = 0.007 Identities = 44/51 (86%) Strand = Plus / Plus Query: 70 aagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgag 120 ||||||||||| ||| | |||||||||||||| || ||||||| |||||| Sbjct: 314 aagtgggtgccttgcttggagttcagcaaggtcggattcgtctaccgtgag 364
>dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A10, full insert sequence Length = 1999 Score = 48.1 bits (24), Expect = 0.007 Identities = 44/51 (86%) Strand = Plus / Plus Query: 70 aagtgggtgccctgcctcgagttcagcaaggttggcttcgtcttncgtgag 120 ||||||||||| ||| | |||||||||||||| || ||||||| |||||| Sbjct: 316 aagtgggtgccttgcttggagttcagcaaggtcggattcgtctaccgtgag 366
>emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene Length = 1274 Score = 44.1 bits (22), Expect = 0.12 Identities = 50/60 (83%) Strand = Plus / Plus Query: 40 ctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcgagttcagcaag 99 |||||||| |||||||||||| | ||| | ||| | ||||||||||||||||||||| Sbjct: 533 ctgaagcaggtggactacctgctgcgcaacggctggataccctgcctcgagttcagcaag 592
>gb|AY103730.1| Zea mays PCO095823 mRNA sequence Length = 1172 Score = 44.1 bits (22), Expect = 0.12 Identities = 50/60 (83%) Strand = Plus / Plus Query: 40 ctgaagcangtggactacctgatncgctccaagtgggtgccctgcctcgagttcagcaag 99 |||||||| |||||||||||| | ||| | ||| | ||||||||||||||||||||| Sbjct: 405 ctgaagcaggtggactacctgctgcgcaacggctggataccctgcctcgagttcagcaag 464
>ref|XM_361365.1| Magnaporthe grisea 70-15 hypothetical protein (MG03839.4) partial mRNA Length = 813 Score = 42.1 bits (21), Expect = 0.46 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 cctgcctcgagttcagcaagg 100 ||||||||||||||||||||| Sbjct: 539 cctgcctcgagttcagcaagg 559
>ref|XM_420404.1| PREDICTED: Gallus gallus similar to protocadherin 18 precursor; protocadherin 68-like protein (LOC422438), mRNA Length = 2805 Score = 38.2 bits (19), Expect = 7.1 Identities = 21/22 (95%) Strand = Plus / Plus Query: 35 ccctcctgaagcangtggacta 56 ||||||||||||| |||||||| Sbjct: 899 ccctcctgaagcaagtggacta 920
>gb|AY530730.1| Zea mays cultivar inbred line B73 Tha8 (tha8) mRNA, complete cds Length = 976 Score = 38.2 bits (19), Expect = 7.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 20 ccctctccacggaggccctcctg 42 ||||||||||||||||| ||||| Sbjct: 221 ccctctccacggaggccatcctg 243
>gb|AY530729.1| Zea mays Tha8 (tha8) gene, complete cds Length = 5140 Score = 38.2 bits (19), Expect = 7.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 20 ccctctccacggaggccctcctg 42 ||||||||||||||||| ||||| Sbjct: 1173 ccctctccacggaggccatcctg 1195
>gb|U55856.1| Caenorhabditis elegans cosmid F31E8, complete sequence Length = 35743 Score = 38.2 bits (19), Expect = 7.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 gagttcagcaaggttggct 106 ||||||||||||||||||| Sbjct: 16583 gagttcagcaaggttggct 16565
>gb|AC011816.17|AC011816 Homo sapiens chromosome 3, clone RP11-129K12, complete sequence Length = 169313 Score = 38.2 bits (19), Expect = 7.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tgtcttacttgccacccct 23 ||||||||||||||||||| Sbjct: 108295 tgtcttacttgccacccct 108277
>gb|AF069529.1|AF069529 Bacteriophage HK97, complete genome Length = 39732 Score = 38.2 bits (19), Expect = 7.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 92 tcagcaaggttggcttcgt 110 ||||||||||||||||||| Sbjct: 10734 tcagcaaggttggcttcgt 10716
>gb|AC007077.2| Homo sapiens BAC clone RP11-260K8 from 2, complete sequence Length = 182019 Score = 38.2 bits (19), Expect = 7.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 11 acttgccacccctctccac 29 ||||||||||||||||||| Sbjct: 78743 acttgccacccctctccac 78725
>gb|AY190946.1| Drosophila pseudoobscura clone DPSF01_27_F17 (D1456) genomic sequence Length = 44117 Score = 38.2 bits (19), Expect = 7.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 gtgggtgccctgcctcgag 90 ||||||||||||||||||| Sbjct: 18020 gtgggtgccctgcctcgag 18002
>gb|AC115771.13| Mus musculus chromosome 19, clone RP23-116D4, complete sequence Length = 209515 Score = 38.2 bits (19), Expect = 7.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 89 agttcagcaaggttggctt 107 ||||||||||||||||||| Sbjct: 173298 agttcagcaaggttggctt 173316
>gb|J03613.1|POTRBCS Potato (S.tuberosum) ribulose bisphosphate carboxylase (rbcS) mRNA, complete cds Length = 546 Score = 38.2 bits (19), Expect = 7.1 Identities = 30/34 (88%) Strand = Plus / Plus Query: 115 cgtgagcacaacagctcccccgggtactacnatg 148 ||||||||||||||||| || || |||||| ||| Sbjct: 331 cgtgagcacaacagctcaccaggatactacgatg 364 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 654,262 Number of Sequences: 3902068 Number of extensions: 654262 Number of successful extensions: 40412 Number of sequences better than 10.0: 108 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 40264 Number of HSP's gapped (non-prelim): 146 length of query: 148 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 127 effective length of database: 17,151,101,840 effective search space: 2178189933680 effective search space used: 2178189933680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
