ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd25c08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118956 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 118897 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118896 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 118837 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118836 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 118777 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118776 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 118717 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118716 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 118657 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118656 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 118597 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118596 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 118537 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118536 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 118477 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 118476 gaggaggctaggttagccgaaagatg 118451 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96200 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 96259 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96260 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 96319 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96320 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 96379 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96380 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 96439 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96440 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 96499 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96500 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 96559 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96560 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 96619 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96620 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 96679 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 96680 gaggaggctaggttagccgaaagatg 96705
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118956 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 118897 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118896 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 118837 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118836 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 118777 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118776 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 118717 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118716 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 118657 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118656 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 118597 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118596 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 118537 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118536 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 118477 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 118476 gaggaggctaggttagccgaaagatg 118451 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96200 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 96259 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96260 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 96319 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96320 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 96379 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96380 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 96439 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96440 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 96499 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96500 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 96559 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96560 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 96619 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96620 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 96679 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 96680 gaggaggctaggttagccgaaagatg 96705
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118905 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 118846 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118845 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 118786 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118785 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 118726 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118725 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 118666 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118665 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 118606 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118605 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 118546 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118545 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 118486 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118485 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 118426 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 118425 gaggaggctaggttagccgaaagatg 118400 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96145 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 96204 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96205 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 96264 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96265 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 96324 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96325 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 96384 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96385 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 96444 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96445 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 96504 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96505 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 96564 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96565 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 96624 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 96625 gaggaggctaggttagccgaaagatg 96650
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508778 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 31508837 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508838 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 31508897 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508898 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 31508957 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508958 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 31509017 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509018 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 31509077 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509078 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 31509137 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509138 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 31509197 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509198 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 31509257 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 31509258 gaggaggctaggttagccgaaagatg 31509283 Score = 793 bits (400), Expect = 0.0 Identities = 400/400 (100%) Strand = Plus / Minus Query: 8 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 68 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 128 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 188 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513137 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11513078 Query: 248 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513077 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11513018 Query: 308 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513017 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 11512958 Query: 368 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 407 |||||||||||||||||||||||||||||||||||||||| Sbjct: 11512957 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 11512918 Score = 771 bits (389), Expect = 0.0 Identities = 395/397 (99%) Strand = Plus / Minus Query: 110 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 170 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 230 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320543 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27320484 Query: 290 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 349 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320483 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27320424 Query: 350 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 409 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27320423 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 27320364 Query: 410 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320363 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 27320304 Query: 470 acggagggacggaggaggctaggttagccgaaagatg 506 ||||||||||||||||||||||||||||||||||||| Sbjct: 27320303 acggagggacggaggaggctaggttagccgaaagatg 27320267 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 24 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 83 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 84 taaaggaggtggggg 98 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 27 gtcgagagggaaacagcccggatcaccagctaaggccc 64 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83818 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 83759 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83758 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 83699 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83698 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 83639 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83638 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 83579 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83578 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 83519 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83518 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 83459 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83458 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 83399 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83398 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 83339 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 83338 gaggaggctaggttagccgaaagatg 83313
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118925 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 118866 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118865 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 118806 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118805 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 118746 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118745 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 118686 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118685 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 118626 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118625 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 118566 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118565 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 118506 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118505 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 118446 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 118445 gaggaggctaggttagccgaaagatg 118420 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96193 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 96252 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96253 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 96312 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96313 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 96372 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96373 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 96432 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96433 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 96492 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96493 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 96552 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96553 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 96612 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96613 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 96672 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 96673 gaggaggctaggttagccgaaagatg 96698
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123241 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 123300 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123301 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 123360 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123361 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 123420 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123421 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 123480 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123481 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 123540 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123541 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 123600 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123601 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 123660 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123661 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 123720 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 123721 gaggaggctaggttagccgaaagatg 123746 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14967 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 15026 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15027 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 15086 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15087 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 15146 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15147 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 15206 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15207 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 15266 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15267 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 15326 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15327 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 15386 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15387 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 15446 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 15447 gaggaggctaggttagccgaaagatg 15472
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141775 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 141834 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141835 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 141894 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141895 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 141954 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141955 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 142014 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142015 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 142074 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142075 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 142134 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142135 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 142194 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142195 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 142254 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 142255 gaggaggctaggttagccgaaagatg 142280
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269127 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 9269186 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269187 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 9269246 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269247 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 9269306 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269307 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 9269366 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269367 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 9269426 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269427 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 9269486 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269487 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 9269546 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269547 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 9269606 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 9269607 gaggaggctaggttagccgaaagatg 9269632 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228627 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 9228686 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228687 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 9228746 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228747 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 9228806 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228807 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 9228866 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228867 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 9228926 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228927 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 9228986 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228987 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 9229046 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229047 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 9229106 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 9229107 gaggaggctaggttagccgaaagatg 9229132 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165215 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 9165274 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165275 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 9165334 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165335 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 9165394 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165395 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 9165454 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165455 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 9165514 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165515 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 9165574 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165575 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 9165634 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165635 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 9165694 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 9165695 gaggaggctaggttagccgaaagatg 9165720 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057041 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 9057100 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057101 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 9057160 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057161 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 9057220 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057221 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 9057280 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057281 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 9057340 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057341 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 9057400 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057401 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 9057460 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057461 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 9057520 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 9057521 gaggaggctaggttagccgaaagatg 9057546 Score = 79.8 bits (40), Expect = 8e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 459 cccttgttggtacggagggacggaggaggctaggttagccgaaagatg 506 ||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 5792165 cccttattggtacggagggacggaggaggctaggttagccaaaagatg 5792212
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939112 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 19939171 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939172 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 19939231 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939232 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 19939291 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939292 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 19939351 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939352 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 19939411 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939412 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 19939471 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939472 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 19939531 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939532 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 19939591 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 19939592 gaggaggctaggttagccgaaagatg 19939617 Score = 995 bits (502), Expect = 0.0 Identities = 505/506 (99%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276319 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 10276260 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276259 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 10276200 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276199 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 10276140 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 10276139 ctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggta 10276080 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276079 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 10276020 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276019 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 10275960 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275959 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 10275900 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275899 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 10275840 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 10275839 gaggaggctaggttagccgaaagatg 10275814 Score = 987 bits (498), Expect = 0.0 Identities = 504/506 (99%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387979 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 10388038 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388039 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 10388098 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388099 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 10388158 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388159 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 10388218 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388219 ggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 10388278 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388279 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 10388338 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 10388339 gtttcctccgcaaggttcgtccacagagggtgagtcagggcctaagatcaggccgaaagg 10388398 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388399 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 10388458 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 10388459 gaggaggctaggttagccgaaagatg 10388484 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 164 gatcgagcgcccttgcgctgaagatgaacggggctaagc 202 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Minus Query: 105 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 164 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241154 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 9241095 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241094 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 9241035 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241034 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 9240975 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240974 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 9240915 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240914 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 9240855 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240854 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 9240795 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240794 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 9240735 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240734 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 9240675 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 9240674 gaggaggctaggttagccgaaagatg 9240649 Score = 109 bits (55), Expect = 9e-21 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 52 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 105 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 106 acagccaggaggtttgcctagaagcagccaccctttaaagag 147 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 79.8 bits (40), Expect = 8e-12 Identities = 59/64 (92%), Gaps = 1/64 (1%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaac-agcccggatcaccagctaa 59 |||||||||||||||||||||||||||||||||| ||||| | ||| |||||||||||| Sbjct: 3580447 tgagacgatgggggataagcttcatcgtcgagagagaaacaaccccaaatcaccagctaa 3580388 Query: 60 ggcc 63 |||| Sbjct: 3580387 ggcc 3580384 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 213 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 259 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 3580239 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 362 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 413 |||||||| |||| |||||||| |||| |||| | ||||||||||||||||| Sbjct: 22199029 tttcctccacaagattcgtccatggagagtgaattagggcctaagatcaggc 22198978 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 177 tgcgctgaagatgaacggggctaagcgatctgccgaagct 216 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 40.1 bits (20), Expect = 6.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 51 accagctaaggcccctaaatgaccgctcagtgataaagga 90 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599294 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 31599353 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599354 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 31599413 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599414 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 31599473 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599474 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 31599533 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599534 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 31599593 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599594 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 31599653 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599654 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 31599713 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599714 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 31599773 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 31599774 gaggaggctaggttagccgaaagatg 31599799 Score = 793 bits (400), Expect = 0.0 Identities = 400/400 (100%) Strand = Plus / Minus Query: 8 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 68 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 128 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 188 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509900 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11509841 Query: 248 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509840 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11509781 Query: 308 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509780 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 11509721 Query: 368 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 407 |||||||||||||||||||||||||||||||||||||||| Sbjct: 11509720 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 11509681 Score = 771 bits (389), Expect = 0.0 Identities = 395/397 (99%) Strand = Plus / Minus Query: 110 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 170 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 230 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411866 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27411807 Query: 290 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 349 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411806 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27411747 Query: 350 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 409 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27411746 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 27411687 Query: 410 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411686 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 27411627 Query: 470 acggagggacggaggaggctaggttagccgaaagatg 506 ||||||||||||||||||||||||||||||||||||| Sbjct: 27411626 acggagggacggaggaggctaggttagccgaaagatg 27411590 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 24 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 83 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 84 taaaggaggtggggg 98 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 27 gtcgagagggaaacagcccggatcaccagctaaggccc 64 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46931 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 46872 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46871 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 46812 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46811 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 46752 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46751 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 46692 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46691 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 46632 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46631 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 46572 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46571 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 46512 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46511 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 46452 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 46451 gaggaggctaggttagccgaaagatg 46426
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52367 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 52308 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52307 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 52248 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52247 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 52188 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52187 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 52128 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52127 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 52068 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52067 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 52008 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52007 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 51948 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51947 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 51888 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 51887 gaggaggctaggttagccgaaagatg 51862
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 638 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 698 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 699 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 758 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 759 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 818 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 819 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 878 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 879 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 938 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 939 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 998 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 999 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 1058 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 1059 gaggaggctaggttagccgaaagatg 1084
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 108 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 168 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 228 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 288 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 348 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 408 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 468 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 528 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 529 gaggaggctaggttagccgaaagatg 554
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 833 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 834 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 893 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 894 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 953 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 954 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 1013 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1014 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 1073 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1074 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 1133 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1134 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 1193 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1194 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 1253 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 1254 gaggaggctaggttagccgaaagatg 1279
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 704 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 705 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 764 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 765 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 824 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 825 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 884 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 885 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 944 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 945 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 1004 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1005 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 1064 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1065 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 1124 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 1125 gaggaggctaggttagccgaaagatg 1150
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 833 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 834 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 893 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 894 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 953 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 954 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 1013 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1014 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 1073 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1074 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 1133 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1134 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 1193 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1194 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 1253 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 1254 gaggaggctaggttagccgaaagatg 1279
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950388 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 19950447 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950448 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 19950507 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950508 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 19950567 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950568 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 19950627 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950628 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 19950687 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950688 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 19950747 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950748 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 19950807 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950808 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 19950867 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 19950868 gaggaggctaggttagccgaaagatg 19950893 Score = 995 bits (502), Expect = 0.0 Identities = 505/506 (99%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282358 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 10282299 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282298 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 10282239 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282238 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 10282179 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 10282178 ctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggta 10282119 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282118 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 10282059 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282058 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 10281999 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281998 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 10281939 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281938 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 10281879 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 10281878 gaggaggctaggttagccgaaagatg 10281853 Score = 987 bits (498), Expect = 0.0 Identities = 504/506 (99%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394018 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 10394077 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394078 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 10394137 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394138 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 10394197 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394198 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 10394257 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394258 ggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 10394317 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394318 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 10394377 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 10394378 gtttcctccgcaaggttcgtccacagagggtgagtcagggcctaagatcaggccgaaagg 10394437 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394438 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 10394497 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 10394498 gaggaggctaggttagccgaaagatg 10394523 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 164 gatcgagcgcccttgcgctgaagatgaacggggctaagc 202 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Minus Query: 105 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 164 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118899 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 118840 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118839 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 118780 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118779 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 118720 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118719 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 118660 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118659 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 118600 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118599 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 118540 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118539 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 118480 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118479 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 118420 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 118419 gaggaggctaggttagccgaaagatg 118394 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96140 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 96199 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96200 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 96259 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96260 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 96319 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96320 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 96379 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96380 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 96439 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96440 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 96499 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96500 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 96559 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96560 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 96619 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 96620 gaggaggctaggttagccgaaagatg 96645
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119091 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 119032 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119031 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 118972 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118971 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 118912 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118911 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 118852 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118851 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 118792 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118791 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 118732 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118731 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 118672 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118671 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 118612 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 118611 gaggaggctaggttagccgaaagatg 118586 Score = 1003 bits (506), Expect = 0.0 Identities = 506/506 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95803 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 95862 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95863 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 95922 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95923 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 95982 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95983 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 96042 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96043 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 96102 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96103 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 96162 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96163 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 96222 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96223 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 96282 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 96283 gaggaggctaggttagccgaaagatg 96308
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 995 bits (502), Expect = 0.0 Identities = 505/506 (99%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117872 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 117813 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117812 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 117753 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117752 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 117693 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 117692 ctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggta 117633 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117632 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 117573 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117572 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 117513 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117512 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 117453 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117452 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 117393 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 117392 gaggaggctaggttagccgaaagatg 117367
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 995 bits (502), Expect = 0.0 Identities = 505/506 (99%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43915 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 43856 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43855 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 43796 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43795 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 43736 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43735 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 43676 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 43675 ggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagc 43616 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43615 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 43556 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43555 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 43496 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43495 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 43436 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 43435 gaggaggctaggttagccgaaagatg 43410 Score = 995 bits (502), Expect = 0.0 Identities = 505/506 (99%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21202 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 21261 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21262 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 21321 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21322 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 21381 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21382 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 21441 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 21442 ggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagc 21501 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21502 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 21561 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21562 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 21621 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21622 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 21681 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 21682 gaggaggctaggttagccgaaagatg 21707
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 995 bits (502), Expect = 0.0 Identities = 505/506 (99%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57644 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 57585 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57584 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 57525 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57524 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 57465 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 57464 ctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggta 57405 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57404 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 57345 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57344 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 57285 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57284 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 57225 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57224 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 57165 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 57164 gaggaggctaggttagccgaaagatg 57139
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 995 bits (502), Expect = 0.0 Identities = 505/506 (99%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 486 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 485 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 426 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 366 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 306 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 305 ggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagc 246 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 186 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 126 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 66 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 65 gaggaggctaggttagccgaaagatg 40
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 995 bits (502), Expect = 0.0 Identities = 505/506 (99%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122755 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 122696 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122695 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 122636 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122635 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 122576 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122575 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 122516 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122515 ggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagc 122456 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122455 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 122396 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122395 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 122336 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122335 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 122276 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 122275 gaggaggctaggttagccgaaagatg 122250 Score = 995 bits (502), Expect = 0.0 Identities = 505/506 (99%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100082 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 100141 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100142 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 100201 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100202 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 100261 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100262 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 100321 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 100322 ggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagc 100381 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100382 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 100441 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100442 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 100501 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100502 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 100561 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 100562 gaggaggctaggttagccgaaagatg 100587
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 995 bits (502), Expect = 0.0 Identities = 505/506 (99%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 456 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 516 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 517 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 576 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 577 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 636 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 637 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggttgacgaagcggaagc 696 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 697 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 756 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 816 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 817 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 876 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 877 gaggaggctaggttagccgaaagatg 902
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 995 bits (502), Expect = 0.0 Identities = 505/506 (99%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123472 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 123413 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123412 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 123353 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123352 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 123293 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123292 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 123233 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 123232 ggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagc 123173 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123172 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 123113 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123112 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 123053 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123052 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 122993 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 122992 gaggaggctaggttagccgaaagatg 122967 Score = 995 bits (502), Expect = 0.0 Identities = 505/506 (99%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100759 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 100818 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100819 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 100878 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100879 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 100938 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100939 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 100998 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 100999 ggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagc 101058 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101059 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 101118 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101119 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 101178 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101179 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 101238 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 101239 gaggaggctaggttagccgaaagatg 101264
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 987 bits (498), Expect = 0.0 Identities = 504/506 (99%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94371 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 94430 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94431 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 94490 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94491 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 94550 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94551 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 94610 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94611 ggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 94670 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94671 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 94730 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 94731 gtttcctccgcaaggttcgtccacagagggtgagtcagggcctaagatcaggccgaaagg 94790 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94791 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 94850 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 94851 gaggaggctaggttagccgaaagatg 94876
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 987 bits (498), Expect = 0.0 Identities = 504/506 (99%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28435 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 28494 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28495 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 28554 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28555 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 28614 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28615 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 28674 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28675 ggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 28734 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28735 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 28794 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 28795 gtttcctccgcaaggttcgtccacagagggtgagtcagggcctaagatcaggccgaaagg 28854 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28855 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 28914 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 28915 gaggaggctaggttagccgaaagatg 28940
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 932 bits (470), Expect = 0.0 Identities = 498/506 (98%), Gaps = 1/506 (0%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122696 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 122637 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 122636 gccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggttt 122577 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 122576 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgactg-gcgcccttgcg 122518 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122517 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 122458 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122457 ggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagc 122398 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122397 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 122338 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122337 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 122278 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122277 ctaagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 122218 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 122217 gaggaggctaggttagccgaaagatg 122192 Score = 932 bits (470), Expect = 0.0 Identities = 498/506 (98%), Gaps = 1/506 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100041 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 100100 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 100101 gccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggttt 100160 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 100161 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgactg-gcgcccttgcg 100219 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100220 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 100279 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 100280 ggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagc 100339 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100340 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 100399 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100400 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 100459 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100460 ctaagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 100519 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 100520 gaggaggctaggttagccgaaagatg 100545
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 932 bits (470), Expect = 0.0 Identities = 498/506 (98%), Gaps = 1/506 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6394 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 6453 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 6454 gccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggttt 6513 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 6514 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgactg-gcgcccttgcg 6572 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6573 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 6632 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 6633 ggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagc 6692 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6693 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 6752 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6753 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 6812 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6813 ctaagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 6872 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 6873 gaggaggctaggttagccgaaagatg 6898
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 932 bits (470), Expect = 0.0 Identities = 498/506 (98%), Gaps = 1/506 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 982 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 1041 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1042 gccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggttt 1101 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 1102 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgactg-gcgcccttgcg 1160 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1161 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 1220 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1221 ggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagc 1280 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1281 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 1340 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1341 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 1400 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1401 ctaagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 1460 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 1461 gaggaggctaggttagccgaaagatg 1486
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 886 bits (447), Expect = 0.0 Identities = 447/447 (100%) Strand = Plus / Plus Query: 13 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 73 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 133 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 180 Query: 193 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 240 Query: 253 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 300 Query: 313 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 360 Query: 373 aggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 aggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgg 420 Query: 433 acaacaggtcaatattcctgtactacc 459 ||||||||||||||||||||||||||| Sbjct: 421 acaacaggtcaatattcctgtactacc 447
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 884 bits (446), Expect = 0.0 Identities = 485/498 (97%) Strand = Plus / Minus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||| |||||||||| || || ||||||||||||||| ||||||||||||| ||| Sbjct: 595 tgggggaaaagcttcatcatctcgaaagaaacagcccggatccccagctaaggcccttaa 536 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 ||||||||||| ||||||||||||||||||||||||| |||||| || |||||||||||| Sbjct: 535 atgaccgctcaatgataaaggaggtgggggtgcaaagccagccatgaagtttgcctagaa 476 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 475 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 416 Query: 189 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 415 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 356 Query: 249 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 308 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 355 ttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgt 296 Query: 309 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 295 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 236 Query: 369 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 235 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 176 Query: 429 atggacaacaggtcaatattcctgtactaccccttgttggtacggagggacggaggaggc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175 atggacaacaggtcaatattcctgtactaccccttgttggtacggagggacggaggaggc 116 Query: 489 taggttagccgaaagatg 506 |||||||||||||||||| Sbjct: 115 taggttagccgaaagatg 98
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 882 bits (445), Expect = 0.0 Identities = 451/453 (99%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 394 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 334 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 274 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 214 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 213 ggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagc 154 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 94 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 34 Query: 421 cgtagtcgatggacaacaggtcaatattcctgt 453 |||| |||||||||||||||||||||||||||| Sbjct: 33 cgtactcgatggacaacaggtcaatattcctgt 1
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 876 bits (442), Expect = 0.0 Identities = 490/506 (96%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 970 tgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 1029 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1030 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 1089 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1090 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 1149 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1150 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 1209 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||||| Sbjct: 1210 ggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagc 1269 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1270 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 1329 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1330 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 1389 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 1390 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 1449 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 1450 gaggaggctaggttagccgaaagatg 1475
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 876 bits (442), Expect = 0.0 Identities = 490/506 (96%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132027 tgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 131968 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 131967 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 131908 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 131907 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 131848 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131847 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 131788 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||||| Sbjct: 131787 ggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagc 131728 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 131727 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 131668 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131667 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 131608 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 131607 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 131548 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 131547 gaggaggctaggttagccgaaagatg 131522 Score = 876 bits (442), Expect = 0.0 Identities = 490/506 (96%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104737 tgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 104796 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 104797 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 104856 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 104857 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 104916 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104917 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 104976 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||||| Sbjct: 104977 ggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagc 105036 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 105037 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 105096 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105097 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 105156 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 105157 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 105216 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 105217 gaggaggctaggttagccgaaagatg 105242
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 876 bits (442), Expect = 0.0 Identities = 490/506 (96%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126896 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 126837 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 126836 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 126777 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 126776 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 126717 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126716 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 126657 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||| ||||| |||| || || |||||||||||||| Sbjct: 126656 ggggagcgttccgccttagagggaagcacccgcgcaagcaggtgtggacgaagcggaagc 126597 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 126596 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 126537 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126536 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 126477 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 126476 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 126417 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 126416 gaggaggctaggttagccgaaagatg 126391 Score = 876 bits (442), Expect = 0.0 Identities = 490/506 (96%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108026 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 108085 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 108086 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 108145 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 108146 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 108205 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108206 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 108265 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||| ||||| |||| || || |||||||||||||| Sbjct: 108266 ggggagcgttccgccttagagggaagcacccgcgcaagcaggtgtggacgaagcggaagc 108325 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 108326 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 108385 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108386 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 108445 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 108446 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 108505 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 108506 gaggaggctaggttagccgaaagatg 108531
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 876 bits (442), Expect = 0.0 Identities = 490/506 (96%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132988 tgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 132929 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 132928 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 132869 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 132868 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 132809 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132808 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 132749 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||||| Sbjct: 132748 ggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagc 132689 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 132688 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 132629 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132628 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 132569 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 132568 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 132509 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 132508 gaggaggctaggttagccgaaagatg 132483 Score = 876 bits (442), Expect = 0.0 Identities = 490/506 (96%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105661 tgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 105720 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 105721 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 105780 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 105781 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 105840 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105841 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 105900 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||||| Sbjct: 105901 ggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagc 105960 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 105961 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 106020 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106021 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 106080 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 106081 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 106140 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 106141 gaggaggctaggttagccgaaagatg 106166
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 868 bits (438), Expect = 0.0 Identities = 489/506 (96%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138533 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 138474 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 138473 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 138414 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 138413 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 138354 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 138353 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggta 138294 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||| |||||||| ||||| |||||| || |||||||||||||| Sbjct: 138293 ggggagcgttccgccttagggggaagcacccgcgtgagcgggagtagacgaagcggaagc 138234 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 138233 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 138174 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138173 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 138114 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 138113 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 138054 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 138053 gaggaggctaggttagccgaaagatg 138028 Score = 868 bits (438), Expect = 0.0 Identities = 489/506 (96%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110564 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 110623 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 110624 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 110683 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 110684 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 110743 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 110744 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggta 110803 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||| |||||||| ||||| |||||| || |||||||||||||| Sbjct: 110804 ggggagcgttccgccttagggggaagcacccgcgtgagcgggagtagacgaagcggaagc 110863 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 110864 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 110923 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110924 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 110983 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 110984 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 111043 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 111044 gaggaggctaggttagccgaaagatg 111069
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 868 bits (438), Expect = 0.0 Identities = 489/506 (96%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138738 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 138679 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 138678 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 138619 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 138618 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 138559 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 138558 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 138499 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||| |||||| ||| ||||| |||||||||||||| Sbjct: 138498 ggggagcgttccgccttagagggaagcacccgcgagagcaggggtggacgaagcggaagc 138439 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 138438 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 138379 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138378 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 138319 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 138318 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 138259 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 138258 gaggaggctaggttagccgaaagatg 138233 Score = 868 bits (438), Expect = 0.0 Identities = 489/506 (96%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110561 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 110620 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 110621 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 110680 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 110681 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 110740 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 110741 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 110800 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||| |||||| ||| ||||| |||||||||||||| Sbjct: 110801 ggggagcgttccgccttagagggaagcacccgcgagagcaggggtggacgaagcggaagc 110860 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 110861 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 110920 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110921 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 110980 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 110981 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 111040 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 111041 gaggaggctaggttagccgaaagatg 111066
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 852 bits (430), Expect = 0.0 Identities = 487/506 (96%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138609 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 138550 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 138549 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 138490 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 138489 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 138430 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 138429 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggta 138370 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| |||||| ||||| ||| || || |||||||||||||| Sbjct: 138369 ggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagc 138310 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 138309 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 138250 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138249 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 138190 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 138189 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 138130 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 138129 gaggaggctaggttagccgaaagatg 138104 Score = 852 bits (430), Expect = 0.0 Identities = 487/506 (96%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111336 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 111395 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 111396 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 111455 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 111456 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 111515 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 111516 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggta 111575 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| |||||| ||||| ||| || || |||||||||||||| Sbjct: 111576 ggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagc 111635 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 111636 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 111695 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111696 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 111755 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 111756 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 111815 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 111816 gaggaggctaggttagccgaaagatg 111841 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 380 tccacggagggtgagtcagggcct 403 |||||||||||||||||||||||| Sbjct: 144327 tccacggagggtgagtcagggcct 144304 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 380 tccacggagggtgagtcagggcct 403 |||||||||||||||||||||||| Sbjct: 105618 tccacggagggtgagtcagggcct 105641
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 852 bits (430), Expect = 0.0 Identities = 487/506 (96%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133252 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 133193 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 133192 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 133133 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 133132 gcctagaagccgccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 133073 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 133072 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggta 133013 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| |||||| ||||| |||| || || |||||||||||||| Sbjct: 133012 ggggagcgttccgccttagagagaagcacccgcgcaagcaggtgtggacgaagcggaagc 132953 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 132952 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 132893 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132892 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 132833 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 132832 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 132773 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 132772 gaggaggctaggttagccgaaagatg 132747 Score = 852 bits (430), Expect = 0.0 Identities = 487/506 (96%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104719 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 104778 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 104779 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 104838 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 104839 gcctagaagccgccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 104898 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 104899 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggta 104958 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| |||||| ||||| |||| || || |||||||||||||| Sbjct: 104959 ggggagcgttccgccttagagagaagcacccgcgcaagcaggtgtggacgaagcggaagc 105018 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 105019 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 105078 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105079 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 105138 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 105139 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 105198 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 105199 gaggaggctaggttagccgaaagatg 105224
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 846 bits (427), Expect = 0.0 Identities = 484/503 (96%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141136 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 141077 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 141076 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 141017 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 141016 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 140957 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 140956 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggta 140897 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| |||||| ||||| ||| || || |||||||||||||| Sbjct: 140896 ggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagc 140837 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 140836 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 140777 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140776 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 140717 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 140716 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 140657 Query: 481 gaggaggctaggttagccgaaag 503 ||||||||||||||||||||||| Sbjct: 140656 gaggaggctaggttagccgaaag 140634 Score = 846 bits (427), Expect = 0.0 Identities = 484/503 (96%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112521 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 112580 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 112581 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 112640 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 112641 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 112700 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 112701 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggta 112760 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| |||||| ||||| ||| || || |||||||||||||| Sbjct: 112761 ggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagc 112820 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 112821 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 112880 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112881 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 112940 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 112941 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 113000 Query: 481 gaggaggctaggttagccgaaag 503 ||||||||||||||||||||||| Sbjct: 113001 gaggaggctaggttagccgaaag 113023
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 844 bits (426), Expect = 0.0 Identities = 486/506 (96%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130696 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 130637 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 130636 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 130577 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 130576 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 130517 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 130516 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 130457 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| |||||| ||||| ||||| || |||||||||||||| Sbjct: 130456 ggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagc 130397 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 130396 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 130337 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130336 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 130277 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 130276 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 130217 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 130216 gaggaggctaggttagccgaaagatg 130191 Score = 844 bits (426), Expect = 0.0 Identities = 486/506 (96%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103939 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 103998 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 103999 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 104058 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 104059 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 104118 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 104119 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 104178 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| |||||| ||||| ||||| || |||||||||||||| Sbjct: 104179 ggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagc 104238 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 104239 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 104298 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104299 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 104358 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 104359 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 104418 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 104419 gaggaggctaggttagccgaaagatg 104444
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 844 bits (426), Expect = 0.0 Identities = 486/506 (96%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134930 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 134871 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 134870 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 134811 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 134810 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 134751 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 134750 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggta 134691 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||| | ||| ||| | || |||||||||||||| Sbjct: 134690 ggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagc 134631 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 134630 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 134571 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134570 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 134511 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 134510 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 134451 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 134450 gaggaggctaggttagccgaaagatg 134425 Score = 844 bits (426), Expect = 0.0 Identities = 486/506 (96%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106976 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 107035 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 107036 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 107095 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 107096 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 107155 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 107156 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggta 107215 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||| | ||| ||| | || |||||||||||||| Sbjct: 107216 ggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagc 107275 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 107276 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 107335 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107336 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 107395 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 107396 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 107455 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 107456 gaggaggctaggttagccgaaagatg 107481
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 844 bits (426), Expect = 0.0 Identities = 486/506 (96%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135621 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 135562 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 135561 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 135502 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 135501 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 135442 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 135441 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 135382 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||| Sbjct: 135381 ggggagcgttccgccttagagggaagtacccgcgcgagcggtagtggacgaagcggaagc 135322 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 135321 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 135262 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135261 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 135202 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 135201 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 135142 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 135141 gaggaggctaggttagccgaaagatg 135116 Score = 844 bits (426), Expect = 0.0 Identities = 486/506 (96%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106804 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 106863 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 106864 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 106923 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 106924 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 106983 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 106984 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 107043 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||| | ||||| ||||| || |||||||||||||| Sbjct: 107044 ggggagcgttccgccttagagggaagtacccgcgcgagcggtagtggacgaagcggaagc 107103 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 107104 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 107163 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107164 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 107223 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 107224 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 107283 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 107284 gaggaggctaggttagccgaaagatg 107309
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 844 bits (426), Expect = 0.0 Identities = 486/506 (96%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135209 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 135150 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 135149 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 135090 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 135089 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 135030 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135029 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggta 134970 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||| | ||| ||| | || |||||||||||||| Sbjct: 134969 ggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagc 134910 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 134909 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 134850 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134849 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 134790 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 134789 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 134730 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 134729 gaggaggctaggttagccgaaagatg 134704 Score = 844 bits (426), Expect = 0.0 Identities = 486/506 (96%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107198 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 107257 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 107258 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 107317 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 107318 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 107377 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 107378 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggta 107437 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||| | ||| ||| | || |||||||||||||| Sbjct: 107438 ggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagc 107497 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 107498 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 107557 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107558 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 107617 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 107618 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 107677 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 107678 gaggaggctaggttagccgaaagatg 107703
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 837 bits (422), Expect = 0.0 Identities = 485/506 (95%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131804 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 131745 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 131744 gcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 131685 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 131684 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 131625 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 131624 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 131565 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| |||||| ||||| ||||| || |||||||||||||| Sbjct: 131564 ggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagc 131505 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 131504 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 131445 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131444 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 131385 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 131384 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 131325 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 131324 gaggaggctaggttagccgaaagatg 131299 Score = 837 bits (422), Expect = 0.0 Identities = 485/506 (95%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105074 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 105133 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 105134 gcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 105193 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 105194 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 105253 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 105254 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 105313 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| |||||| ||||| ||||| || |||||||||||||| Sbjct: 105314 ggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagc 105373 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 105374 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 105433 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105434 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 105493 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 105494 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 105553 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 105554 gaggaggctaggttagccgaaagatg 105579
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 837 bits (422), Expect = 0.0 Identities = 486/506 (96%), Gaps = 1/506 (0%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134020 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 133961 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 133960 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 133901 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 133900 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 133841 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 133840 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggta 133781 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||| ||||||||||||| ||||| ||| || || |||||||||||||| Sbjct: 133780 ggggagcgttccg-cttagagggaagctcccgcgcgagcaggtgtggacgaagcggaagc 133722 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 133721 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 133662 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133661 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 133602 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 133601 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 133542 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 133541 gaggaggctaggttagccgaaagatg 133516 Score = 837 bits (422), Expect = 0.0 Identities = 486/506 (96%), Gaps = 1/506 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106262 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 106321 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 106322 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 106381 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 106382 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 106441 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106442 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggta 106501 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||| ||||||||||||| ||||| ||| || || |||||||||||||| Sbjct: 106502 ggggagcgttccg-cttagagggaagctcccgcgcgagcaggtgtggacgaagcggaagc 106560 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 106561 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 106620 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106621 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 106680 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 106681 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 106740 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 106741 gaggaggctaggttagccgaaagatg 106766
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 837 bits (422), Expect = 0.0 Identities = 485/506 (95%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131797 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 131738 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 131737 gcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 131678 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 131677 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 131618 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 131617 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 131558 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| |||||| ||||| ||||| || |||||||||||||| Sbjct: 131557 ggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagc 131498 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 131497 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 131438 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131437 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 131378 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 131377 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 131318 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 131317 gaggaggctaggttagccgaaagatg 131292 Score = 837 bits (422), Expect = 0.0 Identities = 485/506 (95%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105072 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 105131 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 105132 gcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 105191 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 105192 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 105251 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 105252 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 105311 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| |||||| ||||| ||||| || |||||||||||||| Sbjct: 105312 ggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagc 105371 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 105372 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 105431 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105432 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 105491 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 105492 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 105551 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 105552 gaggaggctaggttagccgaaagatg 105577
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Plus Query: 84 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 144 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 204 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 180 Query: 264 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 240 Query: 324 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 300 Query: 384 cggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtca 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 301 cggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacgggtca 360 Query: 444 atattcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaag 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atattcctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaag 420 Query: 504 atg 506 ||| Sbjct: 421 atg 423
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135329 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 135270 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 135269 gcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 135210 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 135209 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 135150 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 135149 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 135090 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 135089 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 135030 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 135029 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 134970 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134969 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 134910 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||| |||||||||||| | |||||||| Sbjct: 134909 cgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggacg 134850 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 134849 gaggaggctaggttagccgaaagatg 134824 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107301 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 107360 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 107361 gcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 107420 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 107421 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 107480 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 107481 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 107540 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 107541 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 107600 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 107601 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 107660 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107661 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 107720 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||| |||||||||||| | |||||||| Sbjct: 107721 cgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggacg 107780 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 107781 gaggaggctaggttagccgaaagatg 107806
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135967 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 135908 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 135907 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 135848 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 135847 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 135788 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 135787 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 135728 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||| || ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 135727 ggggagcgttccgccttatagagaagcctccgcgcgagcggtggtggacgaagcggaagc 135668 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 135667 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 135608 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135607 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 135548 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||| |||||||||||| | |||||||| Sbjct: 135547 cgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggacg 135488 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 135487 gaggaggctaggttagccgaaagatg 135462 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107590 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 107649 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 107650 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 107709 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 107710 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 107769 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 107770 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 107829 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||| || ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 107830 ggggagcgttccgccttatagagaagcctccgcgcgagcggtggtggacgaagcggaagc 107889 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 107890 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 107949 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107950 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 108009 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||| |||||||||||| | |||||||| Sbjct: 108010 cgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggacg 108069 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 108070 gaggaggctaggttagccgaaagatg 108095
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 141908 tgagacgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaag 141849 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 141848 gcccctaaatgatcgctcagtgataaaggaggtaggggtgcaaagacagccaggaggttt 141789 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 141788 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 141729 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 141728 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 141669 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 141668 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 141609 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 141608 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 141549 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141548 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 141489 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||| |||||||||||| | |||||||| Sbjct: 141488 cgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggacg 141429 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 141428 gaggaggctaggttagccgaaagatg 141403 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 111420 tgagacgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaag 111479 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 111480 gcccctaaatgatcgctcagtgataaaggaggtaggggtgcaaagacagccaggaggttt 111539 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 111540 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 111599 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 111600 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 111659 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 111660 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 111719 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 111720 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 111779 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111780 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 111839 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||| |||||||||||| | |||||||| Sbjct: 111840 cgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggacg 111899 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 111900 gaggaggctaggttagccgaaagatg 111925
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2495 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 2554 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 2555 gcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 2614 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 2615 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 2674 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 2675 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 2734 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 2735 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 2794 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 2795 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 2854 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2855 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 2914 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||| |||||||||||| | |||||||| Sbjct: 2915 cgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggacg 2974 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 2975 gaggaggctaggttagccgaaagatg 3000
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134575 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 134516 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 134515 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 134456 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 134455 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 134396 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||| Sbjct: 134395 ccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggta 134336 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 134335 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 134276 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 134275 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 134216 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134215 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 134156 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||||||||||||| || | |||||||| Sbjct: 134155 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggacg 134096 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 134095 gaggaggctaggttagccgaaagatg 134070 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106461 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 106520 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 106521 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 106580 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 106581 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 106640 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||| Sbjct: 106641 ccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggta 106700 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 106701 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 106760 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 106761 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 106820 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106821 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 106880 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||||||||||||| || | |||||||| Sbjct: 106881 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggacg 106940 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 106941 gaggaggctaggttagccgaaagatg 106966
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134710 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 134651 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 134650 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 134591 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 134590 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 134531 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||| Sbjct: 134530 ccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggta 134471 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 134470 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 134411 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 134410 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 134351 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134350 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 134291 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||||||||||||| || | |||||||| Sbjct: 134290 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggacg 134231 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 134230 gaggaggctaggttagccgaaagatg 134205 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106633 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 106692 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 106693 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 106752 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 106753 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 106812 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||| Sbjct: 106813 ccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggta 106872 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 106873 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 106932 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 106933 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 106992 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106993 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 107052 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||||||||||||| || | |||||||| Sbjct: 107053 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggacg 107112 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 107113 gaggaggctaggttagccgaaagatg 107138
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134708 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 134649 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 134648 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 134589 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 134588 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 134529 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||| Sbjct: 134528 ccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggta 134469 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 134468 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 134409 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 134408 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 134349 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134348 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 134289 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||||||||||||| || | |||||||| Sbjct: 134288 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggacg 134229 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 134228 gaggaggctaggttagccgaaagatg 134203 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106630 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 106689 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 106690 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 106749 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 106750 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 106809 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||| Sbjct: 106810 ccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggta 106869 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 106870 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 106929 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 106930 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 106989 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106990 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 107049 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||||||||||||| || | |||||||| Sbjct: 107050 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggacg 107109 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 107110 gaggaggctaggttagccgaaagatg 107135
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134620 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 134561 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 134560 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 134501 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 134500 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 134441 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||| Sbjct: 134440 ccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggta 134381 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 134380 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 134321 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 134320 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 134261 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134260 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 134201 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||||||||||||| || | |||||||| Sbjct: 134200 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggacg 134141 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 134140 gaggaggctaggttagccgaaagatg 134115 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106508 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 106567 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 106568 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 106627 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 106628 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 106687 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||| Sbjct: 106688 ccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggta 106747 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 106748 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 106807 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 106808 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 106867 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106868 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 106927 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||||||||||||| || | |||||||| Sbjct: 106928 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggacg 106987 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 106988 gaggaggctaggttagccgaaagatg 107013
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135327 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 135268 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 135267 gcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 135208 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 135207 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 135148 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 135147 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 135088 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 135087 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 135028 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 135027 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 134968 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134967 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 134908 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||| |||||||||||| | |||||||| Sbjct: 134907 cgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggacg 134848 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 134847 gaggaggctaggttagccgaaagatg 134822 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 107358 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 107359 gcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 107418 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 107419 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 107478 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 107479 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 107538 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 107539 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 107598 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 107599 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 107658 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107659 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 107718 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||| |||||||||||| | |||||||| Sbjct: 107719 cgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggacg 107778 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 107779 gaggaggctaggttagccgaaagatg 107804
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135058 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 134999 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 134998 gcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 134939 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 134938 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 134879 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 134878 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 134819 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 134818 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 134759 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 134758 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 134699 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134698 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 134639 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||| |||||||||||| | |||||||| Sbjct: 134638 cgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggacg 134579 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 134578 gaggaggctaggttagccgaaagatg 134553 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107080 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 107139 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 107140 gcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 107199 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 107200 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 107259 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 107260 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 107319 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 107320 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 107379 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 107380 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 107439 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107440 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 107499 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||| |||||||||||| | |||||||| Sbjct: 107500 cgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggacg 107559 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 107560 gaggaggctaggttagccgaaagatg 107585
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134587 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 134528 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 134527 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 134468 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 134467 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 134408 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||| Sbjct: 134407 ccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggta 134348 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 134347 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 134288 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 134287 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 134228 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134227 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 134168 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||||||||||||| || | |||||||| Sbjct: 134167 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggacg 134108 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 134107 gaggaggctaggttagccgaaagatg 134082 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106475 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 106534 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 106535 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 106594 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 106595 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 106654 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||| Sbjct: 106655 ccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggta 106714 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 106715 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 106774 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 106775 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 106834 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106835 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 106894 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||||||||||||| || | |||||||| Sbjct: 106895 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggacg 106954 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 106955 gaggaggctaggttagccgaaagatg 106980
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 829 bits (418), Expect = 0.0 Identities = 484/506 (95%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 972 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 1031 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1032 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 1091 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1092 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 1151 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 1152 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaggcatcggta 1211 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||| |||||||| | ||| ||| | ||| |||||||||||||| Sbjct: 1212 ggggagcgttccgccttagggggaagcacctgcgcgagcagcggtagacgaagcggaagc 1271 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 1272 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 1331 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1332 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 1391 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||| |||||||||||| | |||||||| Sbjct: 1392 cgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggacg 1451 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 1452 gaggaggctaggttagccgaaagatg 1477
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 821 bits (414), Expect = 0.0 Identities = 483/506 (95%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2740 tgagacgatgggggataagcttcatcgtcgagagggaaacagtccggatcaccagctaag 2799 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 2800 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 2859 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||| Sbjct: 2860 gcctagaagcagccacccttgaaagagtgcgtaatagcscactgatcgagcgctcttgcg 2919 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 2920 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 2979 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 2980 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 3039 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 3040 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 3099 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3100 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 3159 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||| |||||||||||| | |||||||| Sbjct: 3160 cgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggacg 3219 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 3220 gaggaggctaggttagccgaaagatg 3245
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 819 bits (413), Expect = 0.0 Identities = 413/413 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 454 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 455 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 514 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 515 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 574 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 575 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 634 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 635 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 694 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 695 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 754 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 413 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 807
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 813 bits (410), Expect = 0.0 Identities = 482/506 (95%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 129559 tgagacgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaag 129500 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 129499 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 129440 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 129439 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 129380 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 129379 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgaatcggta 129320 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||| | ||||| ||| | ||| |||||||||||||| Sbjct: 129319 ggggagcgttccgccttagagggaagtacccgcgcgagcagtggtggacgaagcggaagc 129260 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 129259 gagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacctaag 129200 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129199 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 129140 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 129139 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 129080 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 129079 gaggaggctaggttagccgaaagatg 129054 Score = 813 bits (410), Expect = 0.0 Identities = 482/506 (95%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 102897 tgagacgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaag 102956 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 102957 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 103016 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 103017 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 103076 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 103077 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgaatcggta 103136 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||| | ||||| ||| | ||| |||||||||||||| Sbjct: 103137 ggggagcgttccgccttagagggaagtacccgcgcgagcagtggtggacgaagcggaagc 103196 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 103197 gagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacctaag 103256 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103257 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 103316 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 103317 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 103376 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 103377 gaggaggctaggttagccgaaagatg 103402
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 813 bits (410), Expect = 0.0 Identities = 483/506 (95%), Gaps = 1/506 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1068 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 1127 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1128 gcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 1187 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1188 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 1247 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 1248 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 1307 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 1308 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 1367 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 1368 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 1427 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1428 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 1487 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 | ||||||||||||||||||| |||||||||||||| |||||||||||| | |||||||| Sbjct: 1488 c-tagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggacg 1546 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 1547 gaggaggctaggttagccgaaagatg 1572
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 799 bits (403), Expect = 0.0 Identities = 406/407 (99%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 832 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 833 gcccctaaatgaccgctcagtgatagaggaggtgggggtgcaaagacagccaggaggttt 892 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 952 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 953 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 1012 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1013 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 1072 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1073 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 1132 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 407 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1133 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 1179
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 797 bits (402), Expect = 0.0 Identities = 487/515 (94%), Gaps = 9/515 (1%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139396 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 139337 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 139336 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 139277 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 139276 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 139217 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggat-------gtcaaaatgc 233 | ||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 139216 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaagtaaaaatgc 139157 Query: 234 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagc--gggggtcgacga 291 ||||||||||||||||||||||||||||||||||| ||||| ||| | | || ||||| Sbjct: 139156 atcggtaggggagcgttccgccttagagggaagcacccgcgcgagcaggcgtgtggacga 139097 Query: 292 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 351 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 139096 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 139037 Query: 352 aaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcag 411 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139036 aaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcag 138977 Query: 412 gccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtac 471 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| | Sbjct: 138976 gccgaaaggcgtagtcgatgggcaacaggtgaatattcctgtactaccccttgttggtcc 138917 Query: 472 ggagggacggaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||||||||||| Sbjct: 138916 cgagggacggaggaggctaggttagccgaaagatg 138882 Score = 797 bits (402), Expect = 0.0 Identities = 487/515 (94%), Gaps = 9/515 (1%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110664 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 110723 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 110724 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 110783 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 110784 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 110843 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggat-------gtcaaaatgc 233 | ||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 110844 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaagtaaaaatgc 110903 Query: 234 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagc--gggggtcgacga 291 ||||||||||||||||||||||||||||||||||| ||||| ||| | | || ||||| Sbjct: 110904 atcggtaggggagcgttccgccttagagggaagcacccgcgcgagcaggcgtgtggacga 110963 Query: 292 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 351 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 110964 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 111023 Query: 352 aaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcag 411 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111024 aaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcag 111083 Query: 412 gccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtac 471 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| | Sbjct: 111084 gccgaaaggcgtagtcgatgggcaacaggtgaatattcctgtactaccccttgttggtcc 111143 Query: 472 ggagggacggaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||||||||||| Sbjct: 111144 cgagggacggaggaggctaggttagccgaaagatg 111178
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 797 bits (402), Expect = 0.0 Identities = 480/506 (94%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130896 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 130837 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 130836 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacaaccaggaggttt 130777 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 130776 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 130717 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| Sbjct: 130716 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaagaatcggta 130657 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||| | ||||| ||| | | | |||||||||||||| Sbjct: 130656 ggggagcgttccgccttagagggaaggacccgcgcgagcagtgctggacgaagcggaagc 130597 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| Sbjct: 130596 gagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaag 130537 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 130536 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaggg 130477 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||||||| |||||||| | |||||||| Sbjct: 130476 cgtagtcgatggacaacaggtgaatattcctgtactaccctttgttggtcccgagggacg 130417 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 130416 gaggaggctaggttagccgaaagatg 130391 Score = 797 bits (402), Expect = 0.0 Identities = 480/506 (94%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104498 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 104557 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 104558 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacaaccaggaggttt 104617 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 104618 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 104677 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| Sbjct: 104678 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaagaatcggta 104737 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||| | ||||| ||| | | | |||||||||||||| Sbjct: 104738 ggggagcgttccgccttagagggaaggacccgcgcgagcagtgctggacgaagcggaagc 104797 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| Sbjct: 104798 gagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaag 104857 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 104858 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaggg 104917 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||||||| |||||||| | |||||||| Sbjct: 104918 cgtagtcgatggacaacaggtgaatattcctgtactaccctttgttggtcccgagggacg 104977 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 104978 gaggaggctaggttagccgaaagatg 105003
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 793 bits (400), Expect = 0.0 Identities = 400/400 (100%) Strand = Plus / Minus Query: 8 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 68 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 128 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 188 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63709 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 63650 Query: 248 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63649 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 63590 Query: 308 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63589 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 63530 Query: 368 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 407 |||||||||||||||||||||||||||||||||||||||| Sbjct: 63529 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 63490
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 789 bits (398), Expect = 0.0 Identities = 479/506 (94%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 5191 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaag 5250 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||| |||||||||||||||||||| || ||||| ||||||||||||||||| Sbjct: 5251 gcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagccaggaggttt 5310 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 5311 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 5370 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||| Sbjct: 5371 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaatgaatcggta 5430 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||| |||| | ||||| ||| ||| | |||||||||||||| Sbjct: 5431 ggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacgaagcggaagc 5490 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 5491 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 5550 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5551 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 5610 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||| ||||||||| | |||||||| Sbjct: 5611 cgtagtcgatggacaacaggtgaatattcctgtactacctcttgttggtcccgagggacg 5670 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 5671 gaggaggctaggttagccgaaagatg 5696
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 789 bits (398), Expect = 0.0 Identities = 479/506 (94%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 22734 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaag 22675 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||| |||||||||||||||||||| || ||||| ||||||||||||||||| Sbjct: 22674 gcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagccaggaggttt 22615 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 22614 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 22555 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||| Sbjct: 22554 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaatgaatcggta 22495 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||| |||| | ||||| ||| ||| | |||||||||||||| Sbjct: 22494 ggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacgaagcggaagc 22435 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 22434 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 22375 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22374 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 22315 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||| ||||||||| | |||||||| Sbjct: 22314 cgtagtcgatggacaacaggtgaatattcctgtactacctcttgttggtcccgagggacg 22255 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 22254 gaggaggctaggttagccgaaagatg 22229
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 789 bits (398), Expect = 0.0 Identities = 479/506 (94%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 975 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaag 1034 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 1035 gcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggttt 1094 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 1095 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcg 1154 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 1155 ccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggta 1214 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||| | ||| ||| || || |||||||||||||| Sbjct: 1215 ggggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagc 1274 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 1275 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 1334 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1335 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 1394 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 1395 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 1454 Query: 481 gaggaggctaggttagccgaaagatg 506 ||||||||||||||||||||||||| Sbjct: 1455 aaggaggctaggttagccgaaagatg 1480
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 781 bits (394), Expect = 0.0 Identities = 478/506 (94%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 87233 tgagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaag 87292 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||| ||||| || | ||||||||||||||||||||||| Sbjct: 87293 gcccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccaggaggttt 87352 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 87353 gcctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 87412 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 87413 ccgaagatgaacgggactaagcgatctgccgaagctgtgggatgtcaaaatacatcggta 87472 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||| |||| |||||| | ||| ||| || || |||||||||||||| Sbjct: 87473 ggggagcgttccgcctcagagagaagcaccggcgcgagcaggtgtggacgaagcggaagc 87532 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 87533 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 87592 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87593 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 87652 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 87653 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 87712 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 87713 gaggaggctaggttagccgaaagatg 87738
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 781 bits (394), Expect = 0.0 Identities = 478/506 (94%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 117174 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaag 117115 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||||| Sbjct: 117114 gcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggttt 117055 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 117054 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcg 116995 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 116994 ccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggta 116935 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||| | ||| ||| || || |||||||||||||| Sbjct: 116934 ggggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagc 116875 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 116874 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 116815 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116814 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 116755 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 116754 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 116695 Query: 481 gaggaggctaggttagccgaaagatg 506 ||||||||||||||||||||||||| Sbjct: 116694 aaggaggctaggttagccgaaagatg 116669 Score = 781 bits (394), Expect = 0.0 Identities = 478/506 (94%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 90928 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaag 90987 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||||| Sbjct: 90988 gcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggttt 91047 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 91048 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcg 91107 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 91108 ccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggta 91167 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||| | ||| ||| || || |||||||||||||| Sbjct: 91168 ggggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagc 91227 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 91228 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 91287 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91288 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 91347 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 91348 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 91407 Query: 481 gaggaggctaggttagccgaaagatg 506 ||||||||||||||||||||||||| Sbjct: 91408 aaggaggctaggttagccgaaagatg 91433
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 773 bits (390), Expect = 0.0 Identities = 477/506 (94%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 89320 tgagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaag 89379 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||| ||||| || | ||||||||||||||||||||||| Sbjct: 89380 gcccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccaggaggttt 89439 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||| |||| |||||||||||||||||||||||||||||||| | |||| Sbjct: 89440 gcctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctcgtgcg 89499 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 89500 ccgaagatgaacgggactaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 89559 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||| ||||||||||| | ||| ||| || || |||||||||||||| Sbjct: 89560 ggggagcgttccgcctcagagggaagcaccggcgcgagcaggtgtggacgaagcggaagc 89619 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 89620 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 89679 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89680 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 89739 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 89740 cgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 89799 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 89800 gaggaggctaggttagccgaaagatg 89825
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 771 bits (389), Expect = 0.0 Identities = 395/397 (99%) Strand = Plus / Minus Query: 110 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 170 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 230 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20750 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 20691 Query: 290 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 349 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20690 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 20631 Query: 350 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 409 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 20630 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 20571 Query: 410 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20570 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 20511 Query: 470 acggagggacggaggaggctaggttagccgaaagatg 506 ||||||||||||||||||||||||||||||||||||| Sbjct: 20510 acggagggacggaggaggctaggttagccgaaagatg 20474
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 767 bits (387), Expect = 0.0 Identities = 478/507 (94%), Gaps = 1/507 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatc-gtcgagagggaaacagcccggatcaccagctaa 59 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 5462 tgagacgatgggggataagcttcatctgtcgagagggaaacagcccagatcaccagctaa 5521 Query: 60 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 119 ||||||||||||| |||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 5522 ggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagccaggaggtt 5581 Query: 120 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 179 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 5582 tgcctagaagcagccacccttcaaagagtgcgtaatagctcactgatcgagcgctcttgc 5641 Query: 180 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 239 || ||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 5642 gccgaagatgaacggggctaagcgatttgccgaagctgtgggatgtaaaaatgaatcggt 5701 Query: 240 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 299 ||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||||||| Sbjct: 5702 aggggagcgttccgccttagaaagaagtacccgcgcgagcagggttggacgaagcggaag 5761 Query: 300 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 359 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 5762 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaa 5821 Query: 360 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 419 || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 5822 ggattcctccgcaaggttcgtccacggagggtaagtcaggacctaagatcaggccgaaag 5881 Query: 420 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 479 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 5882 gcgtagtcgatggacaacaggttaatattcctgtactgccccttgttggtcccgagggac 5941 Query: 480 ggaggaggctaggttagccgaaagatg 506 ||||||||||||||||||||||||||| Sbjct: 5942 ggaggaggctaggttagccgaaagatg 5968
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 767 bits (387), Expect = 0.0 Identities = 478/507 (94%), Gaps = 1/507 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatc-gtcgagagggaaacagcccggatcaccagctaa 59 |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 5462 tgagacgatgggggataagcttcatctgtcgagagggaaacagcccagatcaccagctaa 5521 Query: 60 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 119 ||||||||||||| |||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 5522 ggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagccaggaggtt 5581 Query: 120 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 179 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 5582 tgcctagaagcagccacccttcaaagagtgcgtaatagctcactgatcgagcgctcttgc 5641 Query: 180 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 239 || ||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 5642 gccgaagatgaacggggctaagcgatttgccgaagctgtgggatgtaaaaatgaatcggt 5701 Query: 240 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 299 ||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||||||| Sbjct: 5702 aggggagcgttccgccttagaaagaagtacccgcgcgagcagggttggacgaagcggaag 5761 Query: 300 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 359 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 5762 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaa 5821 Query: 360 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 419 || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 5822 ggattcctccgcaaggttcgtccacggagggtaagtcaggacctaagatcaggccgaaag 5881 Query: 420 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 479 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 5882 gcgtagtcgatggacaacaggttaatattcctgtactgccccttgttggtcccgagggac 5941 Query: 480 ggaggaggctaggttagccgaaagatg 506 ||||||||||||||||||||||||||| Sbjct: 5942 ggaggaggctaggttagccgaaagatg 5968
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 759 bits (383), Expect = 0.0 Identities = 477/507 (94%), Gaps = 1/507 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 975 tgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaag 1034 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 1035 gcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggttt 1094 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 1095 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcg 1154 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1155 ccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggta 1214 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||| |||||||| | ||| ||| || || |||||||||||||| Sbjct: 1215 ggggagcgttccgccttagggggaagcaccagcgcgagcaggtgtggacgaagcggaagc 1274 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 1275 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 1334 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1335 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 1394 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtacta-ccccttgttggtacggagggac 479 ||||||||||||||||||||| ||||||||||||| | |||||||||||| | ||||||| Sbjct: 1395 cgtagtcgatggacaacaggtgaatattcctgtaccacccccttgttggtcccgagggac 1454 Query: 480 ggaggaggctaggttagccgaaagatg 506 ||||||||||||||||||||| ||||| Sbjct: 1455 ggaggaggctaggttagccgagagatg 1481
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 759 bits (383), Expect = 0.0 Identities = 477/507 (94%), Gaps = 1/507 (0%) Strand = Plus / Plus Query: 1 tgagacgatggggg-ataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 59 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1466 tgagacgatggggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 1525 Query: 60 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 119 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 1526 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 1585 Query: 120 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 179 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1586 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1645 Query: 180 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 239 || ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 1646 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaaacatcggt 1705 Query: 240 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 299 |||||||||||||| |||| |||||||| | ||| ||| | ||||||||||||| Sbjct: 1706 aggggagcgttccgtgttagggggaagcatcggcgcgagccatgccagacgaagcggaag 1765 Query: 300 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 359 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1766 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1825 Query: 360 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 419 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1826 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 1885 Query: 420 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 479 |||||||||||||||||||||| ||||||||||||||||||||||| || | ||||||| Sbjct: 1886 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgtagggcccgagggac 1945 Query: 480 ggaggaggctaggttagccgaaagatg 506 ||||||||||||||||||||||||||| Sbjct: 1946 ggaggaggctaggttagccgaaagatg 1972
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 751 bits (379), Expect = 0.0 Identities = 477/507 (94%), Gaps = 2/507 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 988 tgagacgatgggggataagcttcatcgtcgagagggaaacagccctgatcacccgctaag 1047 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1048 gcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 1107 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 || || |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1108 gc-tataagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 1166 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||| Sbjct: 1167 ccgaagatgaacggggctaagtgatctgccgaagctgtgggatgtaaaaaggcatcggta 1226 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||| ||||| |||||||| | ||| ||| | ||| |||||||||||||| Sbjct: 1227 ggggagcgttccgtcttagggggaagcacctgcgcgagcagtggtagacgaagcggaagc 1286 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 1287 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 1346 Query: 361 gtttcctccgcaaggttcgtccacgg-agggtgagtcagggcctaagatcaggccgaaag 419 | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1347 ggttcctccgcaaggttcgtccacggtagggtgagtcagggcctaagatcaggccgaaag 1406 Query: 420 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 479 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 1407 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 1466 Query: 480 ggaggaggctaggttagccgaaagatg 506 ||||||||||||||||||||||||||| Sbjct: 1467 ggaggaggctaggttagccgaaagatg 1493
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 739 bits (373), Expect = 0.0 Identities = 465/492 (94%), Gaps = 4/492 (0%) Strand = Plus / Plus Query: 15 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 75 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 134 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 135 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 194 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 436 Query: 195 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 254 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 437 ggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggga-cgttccgc 495 Query: 255 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 314 ||||| |||||| | ||||| ||| | | | |||||||||||||||||||||||||||| Sbjct: 496 cttagggggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggctt 555 Query: 315 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 374 |||||||| |||| ||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 556 gagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggttcctccgcaag 615 Query: 375 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 434 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 616 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaa--cgtagtcgatggac 673 Query: 435 aacaggtcaatattcctgtactaccccttgttggtacggagggacggaggaggctaggtt 494 ||||||| |||||||||||||||||| |||||||| | |||||||||||||||||||||| Sbjct: 674 aacaggtgaatattcctgtactaccctttgttggt-ccgagggacggaggaggctaggtt 732 Query: 495 agccgaaagatg 506 |||||||||||| Sbjct: 733 agccgaaagatg 744
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 733 bits (370), Expect = 0.0 Identities = 472/506 (93%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 4868 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaag 4927 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| Sbjct: 4928 gcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagccaggaggttt 4987 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 4988 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcg 5047 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||| ||| ||||||| |||||||||||||||||||||| |||| |||||||| Sbjct: 5048 ccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggta 5107 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||| | ||| ||| || || |||||||||||||| Sbjct: 5108 ggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaagc 5167 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 5168 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 5227 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5228 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 5287 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||| || | |||||| | |||||||| Sbjct: 5288 cgtagtcgatggacaacaggtgaatattcctgtactatccttagttggtcccgagggacg 5347 Query: 481 gaggaggctaggttagccgaaagatg 506 ||| ||| |||||||||||||||||| Sbjct: 5348 gagaaggttaggttagccgaaagatg 5373
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 733 bits (370), Expect = 0.0 Identities = 472/506 (93%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 978 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaag 1037 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| Sbjct: 1038 gcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagccaggaggttt 1097 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 1098 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcg 1157 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||| ||| ||||||| |||||||||||||||||||||| |||| |||||||| Sbjct: 1158 ccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggta 1217 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||| | ||| ||| || || |||||||||||||| Sbjct: 1218 ggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaagc 1277 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 1278 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 1337 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1338 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 1397 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||| || | |||||| | |||||||| Sbjct: 1398 cgtagtcgatggacaacaggtgaatattcctgtactatccttagttggtcccgagggacg 1457 Query: 481 gaggaggctaggttagccgaaagatg 506 ||| ||| |||||||||||||||||| Sbjct: 1458 gagaaggttaggttagccgaaagatg 1483
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 733 bits (370), Expect = 0.0 Identities = 472/506 (93%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 150267 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaag 150208 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| Sbjct: 150207 gcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagccaggaggttt 150148 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 150147 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcg 150088 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||| ||| ||||||| |||||||||||||||||||||| |||| |||||||| Sbjct: 150087 ccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggta 150028 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||| | ||| ||| || || |||||||||||||| Sbjct: 150027 ggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaagc 149968 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 149967 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 149908 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149907 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 149848 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||| || | |||||| | |||||||| Sbjct: 149847 cgtagtcgatggacaacaggtgaatattcctgtactatccttagttggtcccgagggacg 149788 Query: 481 gaggaggctaggttagccgaaagatg 506 ||| ||| |||||||||||||||||| Sbjct: 149787 gagaaggttaggttagccgaaagatg 149762 Score = 733 bits (370), Expect = 0.0 Identities = 472/506 (93%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 118399 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaag 118458 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| Sbjct: 118459 gcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagccaggaggttt 118518 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 118519 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcg 118578 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||| ||| ||||||| |||||||||||||||||||||| |||| |||||||| Sbjct: 118579 ccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggta 118638 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||| | ||| ||| || || |||||||||||||| Sbjct: 118639 ggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaagc 118698 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 118699 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 118758 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118759 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 118818 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||| || | |||||| | |||||||| Sbjct: 118819 cgtagtcgatggacaacaggtgaatattcctgtactatccttagttggtcccgagggacg 118878 Query: 481 gaggaggctaggttagccgaaagatg 506 ||| ||| |||||||||||||||||| Sbjct: 118879 gagaaggttaggttagccgaaagatg 118904
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 733 bits (370), Expect = 0.0 Identities = 472/506 (93%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 978 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaag 1037 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| Sbjct: 1038 gcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagccaggaggttt 1097 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 1098 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcg 1157 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||| ||| ||||||| |||||||||||||||||||||| |||| |||||||| Sbjct: 1158 ccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggta 1217 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||| | ||| ||| || || |||||||||||||| Sbjct: 1218 ggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaagc 1277 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 1278 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 1337 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1338 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 1397 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| ||||||||||||||| || | |||||| | |||||||| Sbjct: 1398 cgtagtcgatggacaacaggtgaatattcctgtactatccttagttggtcccgagggacg 1457 Query: 481 gaggaggctaggttagccgaaagatg 506 ||| ||| |||||||||||||||||| Sbjct: 1458 gagaaggttaggttagccgaaagatg 1483
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 726 bits (366), Expect = 0.0 Identities = 465/498 (93%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 967 tgggggataagcttcattgtcgagagggaaacagcccagatcaccagctaaggcccctaa 1026 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 ||||||||| |||| | |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1027 atgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggaggtttgcctagaa 1086 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 ||||||| |||| |||||||||||||||||||||||||| ||||| ||||||| |||||| Sbjct: 1087 gcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagat 1146 Query: 189 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 248 ||| ||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1147 gaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcg 1206 Query: 249 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 308 ||||||||||||| ||||| | ||| ||| || || |||||||||||||||||||||| Sbjct: 1207 ttccgccttagagagaagcgccagcgtgagcaggtgtggacgaagcggaagcgagaatgt 1266 Query: 309 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 368 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1267 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1326 Query: 369 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 428 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1327 tgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccaaaaggcgtagtcg 1386 Query: 429 atggacaacaggtcaatattcctgtactaccccttgttggtacggagggacggaggaggc 488 |||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 1387 atggacaacaggcgaatattcctgtactaccccttgttggtcccgagggacggaggaggc 1446 Query: 489 taggttagccgaaagatg 506 |||||||||||||||||| Sbjct: 1447 taggttagccgaaagatg 1464
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 720 bits (363), Expect = 0.0 Identities = 366/367 (99%) Strand = Plus / Plus Query: 140 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 60 Query: 200 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 120 Query: 260 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 180 Query: 320 acgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 acgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcg 240 Query: 380 tccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacag 439 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 241 tccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgacggacaacag 300 Query: 440 gtcaatattcctgtactaccccttgttggtacggagggacggaggaggctaggttagccg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gtcaatattcctgtactaccccttgttggtacggagggacggaggaggctaggttagccg 360 Query: 500 aaagatg 506 ||||||| Sbjct: 361 aaagatg 367
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 718 bits (362), Expect = 0.0 Identities = 466/498 (93%), Gaps = 2/498 (0%) Strand = Plus / Minus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||| Sbjct: 115228 tgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaa 115169 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 |||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 115168 atgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaa 115109 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||| Sbjct: 115108 gcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagat 115049 Query: 189 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 248 ||| ||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 115048 gaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcg 114989 Query: 249 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 308 ||||||||||| | ||||| | | || ||| || || |||||||||||||||||||||| Sbjct: 114988 ttccgccttagggagaagc-atcacgtgagcaggtgtggacgaagcggaagcgagaatgt 114930 Query: 309 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 368 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 114929 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 114870 Query: 369 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114869 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 114810 Query: 429 atggacaacaggtcaatattcctgtactaccccttgttggtacggagggacggaggaggc 488 |||||||||||| ||||||||||||||||||||||||||| | ||||||| |||||||| Sbjct: 114809 atggacaacaggcaaatattcctgtactaccccttgttggtcccgagggac-gaggaggc 114751 Query: 489 taggttagccgaaagatg 506 |||||||||||||||||| Sbjct: 114750 taggttagccgaaagatg 114733 Score = 718 bits (362), Expect = 0.0 Identities = 466/498 (93%), Gaps = 2/498 (0%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||| Sbjct: 86892 tgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaa 86951 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 |||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 86952 atgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaa 87011 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||| Sbjct: 87012 gcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagat 87071 Query: 189 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 248 ||| ||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 87072 gaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcg 87131 Query: 249 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 308 ||||||||||| | ||||| | | || ||| || || |||||||||||||||||||||| Sbjct: 87132 ttccgccttagggagaagc-atcacgtgagcaggtgtggacgaagcggaagcgagaatgt 87190 Query: 309 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 368 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 87191 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 87250 Query: 369 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87251 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 87310 Query: 429 atggacaacaggtcaatattcctgtactaccccttgttggtacggagggacggaggaggc 488 |||||||||||| ||||||||||||||||||||||||||| | ||||||| |||||||| Sbjct: 87311 atggacaacaggcaaatattcctgtactaccccttgttggtcccgagggac-gaggaggc 87369 Query: 489 taggttagccgaaagatg 506 |||||||||||||||||| Sbjct: 87370 taggttagccgaaagatg 87387
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 716 bits (361), Expect = 0.0 Identities = 467/501 (93%), Gaps = 1/501 (0%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51714 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 51655 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtg-ggggtgcaaagacagccaggaggtt 119 |||||||| ||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 51654 gcccctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggtt 51595 Query: 120 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 179 ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||| Sbjct: 51594 tgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgc 51535 Query: 180 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 239 || ||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||| Sbjct: 51534 gccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggt 51475 Query: 240 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 299 |||||||||||||||||||||||||||| | || ||| | ||| ||||||||||||| Sbjct: 51474 aggggagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaagcggaag 51415 Query: 300 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 359 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 51414 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 51355 Query: 360 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 419 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51354 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 51295 Query: 420 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 479 |||||||| ||||||||||||| |||||||||||||||||||| | |||| | ||||||| Sbjct: 51294 gcgtagtcaatggacaacaggtgaatattcctgtactacccctcgctggtcccgagggac 51235 Query: 480 ggaggaggctaggttagccga 500 |||| |||||||||||||||| Sbjct: 51234 ggagcaggctaggttagccga 51214 Score = 716 bits (361), Expect = 0.0 Identities = 467/501 (93%), Gaps = 1/501 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38114 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 38173 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtg-ggggtgcaaagacagccaggaggtt 119 |||||||| ||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 38174 gcccctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggtt 38233 Query: 120 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 179 ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||| Sbjct: 38234 tgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgc 38293 Query: 180 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 239 || ||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||| Sbjct: 38294 gccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggt 38353 Query: 240 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 299 |||||||||||||||||||||||||||| | || ||| | ||| ||||||||||||| Sbjct: 38354 aggggagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaagcggaag 38413 Query: 300 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 359 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 38414 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 38473 Query: 360 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 419 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38474 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 38533 Query: 420 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 479 |||||||| ||||||||||||| |||||||||||||||||||| | |||| | ||||||| Sbjct: 38534 gcgtagtcaatggacaacaggtgaatattcctgtactacccctcgctggtcccgagggac 38593 Query: 480 ggaggaggctaggttagccga 500 |||| |||||||||||||||| Sbjct: 38594 ggagcaggctaggttagccga 38614
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 716 bits (361), Expect = 0.0 Identities = 467/501 (93%), Gaps = 1/501 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5042 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 5101 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtg-ggggtgcaaagacagccaggaggtt 119 |||||||| ||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 5102 gcccctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggtt 5161 Query: 120 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 179 ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||| Sbjct: 5162 tgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgc 5221 Query: 180 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 239 || ||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||| Sbjct: 5222 gccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggt 5281 Query: 240 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 299 |||||||||||||||||||||||||||| | || ||| | ||| ||||||||||||| Sbjct: 5282 aggggagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaagcggaag 5341 Query: 300 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 359 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 5342 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 5401 Query: 360 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 419 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5402 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 5461 Query: 420 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 479 |||||||| ||||||||||||| |||||||||||||||||||| | |||| | ||||||| Sbjct: 5462 gcgtagtcaatggacaacaggtgaatattcctgtactacccctcgctggtcccgagggac 5521 Query: 480 ggaggaggctaggttagccga 500 |||| |||||||||||||||| Sbjct: 5522 ggagcaggctaggttagccga 5542
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 710 bits (358), Expect = 0.0 Identities = 469/506 (92%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 145579 tgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaag 145520 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||| | |||||||| || ||||| |||||||||||| |||| Sbjct: 145519 gcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagccaggaagttt 145460 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 145459 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcg 145400 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||| ||||||||| ||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 145399 ccgaaaatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggta 145340 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||| | ||| ||| || || ||| |||||||||| Sbjct: 145339 ggggagcgttccgccttagagggaagcaccagcgcgagcaggtgtggacaaagcggaagc 145280 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 145279 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 145220 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 145219 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaaggtaaggccgaaagg 145160 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 145159 cgtagttgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 145100 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||| ||||||||| ||||| Sbjct: 145099 gaggaggctaagttagccgagagatg 145074 Score = 710 bits (358), Expect = 0.0 Identities = 469/506 (92%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 112883 tgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaag 112942 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||| | |||||||| || ||||| |||||||||||| |||| Sbjct: 112943 gcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagccaggaagttt 113002 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 113003 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcg 113062 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||| ||||||||| ||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 113063 ccgaaaatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggta 113122 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||| | ||| ||| || || ||| |||||||||| Sbjct: 113123 ggggagcgttccgccttagagggaagcaccagcgcgagcaggtgtggacaaagcggaagc 113182 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 113183 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 113242 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 113243 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaaggtaaggccgaaagg 113302 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||| Sbjct: 113303 cgtagttgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacg 113362 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||| ||||||||| ||||| Sbjct: 113363 gaggaggctaagttagccgagagatg 113388
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 710 bits (358), Expect = 0.0 Identities = 463/498 (92%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| |||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 987 tgggggataagcttcattgtcgagaggggaacagcccagatcaccggctaaggcccctaa 1046 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 ||||||||| |||| |||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 1047 atgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaa 1106 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 ||||||| |||| |||||||||||||||||||||||||| ||||| ||||||| |||||| Sbjct: 1107 gcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagat 1166 Query: 189 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 248 ||| ||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1167 gaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcg 1226 Query: 249 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 308 ||||||||||| | |||||| | ||| ||| || || |||||||||||||||||||||| Sbjct: 1227 ttccgccttagggagaagcaccagcgtgagcaggtgtggacgaagcggaagcgagaatgt 1286 Query: 309 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 368 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1287 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1346 Query: 369 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1347 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 1406 Query: 429 atggacaacaggtcaatattcctgtactaccccttgttggtacggagggacggaggaggc 488 |||||||||||| |||||||||||||||||||||| |||| | ||||||||||| |||| Sbjct: 1407 atggacaacaggcgaatattcctgtactaccccttgctggtcccgagggacggagtaggc 1466 Query: 489 taggttagccgaaagatg 506 |||||||||||||||||| Sbjct: 1467 taggttagccgaaagatg 1484
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 702 bits (354), Expect = 0.0 Identities = 357/358 (99%) Strand = Plus / Plus Query: 149 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 60 Query: 209 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 120 Query: 269 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 180 Query: 329 ttggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggag 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggag 240 Query: 389 ggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatatt 448 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggtgagtcagggcctaggatcaggccgaaaggcgtagtcgatggacaacaggtcaatatt 300 Query: 449 cctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagatg 358
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 698 bits (352), Expect = 0.0 Identities = 352/352 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526610 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 33526669 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526670 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 33526729 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526730 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 33526789 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526790 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 33526849 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526850 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 33526909 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 352 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526910 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 33526961 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 17 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 76 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 77 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 136 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 137 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 527925 Query: 197 ctaagcgatctgccgaagctgtgggatgtcaaaat 231 |||||||||||||| |||||||||||||||||||| Sbjct: 527926 ctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 141 bits (71), Expect = 3e-30 Identities = 130/147 (88%), Gaps = 2/147 (1%) Strand = Plus / Minus Query: 237 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 296 |||||||||| ||||| |||||||||||||| ||| | |||| ||| |||| ||||||| Sbjct: 1076778 ggtaggggagtgttccaccttagagggaagccaccacaaaagtaggg-tcgatgaagcgg 1076720 Query: 297 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 356 | | ||||||||| ||||||||||| ||||||| ||| ||||||||||||| |||||||| Sbjct: 1076719 atgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatccaatgcctcgaaaacc 1076661 Query: 357 caaggtttcctccgcaaggttcgtcca 383 || |||||||||||||||||||||||| Sbjct: 1076660 cagggtttcctccgcaaggttcgtcca 1076634 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 164 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 205 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911 Score = 58.0 bits (29), Expect = 3e-05 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 233 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 292 ||||||| || ||| |||| |||||| | |||||||||||| ||||| |||||||| || Sbjct: 1076893 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 1076835 Query: 293 gcggaagcgagaatgtcggcttgagtaac 321 | ||||| |||||||| |||| ||||||| Sbjct: 1076834 gtggaagtgagaatgttggctggagtaac 1076806 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 313 ttgagtaacgaaaacattggtgagaatc 340 |||||||||||||||||||||||||||| Sbjct: 33498173 ttgagtaacgaaaacattggtgagaatc 33498146 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 gatcaggccgaaaggcgtag 425 |||||||||||||||||||| Sbjct: 41814858 gatcaggccgaaaggcgtag 41814877
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 698 bits (352), Expect = 0.0 Identities = 352/352 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71807 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 71866 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71867 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 71926 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71927 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 71986 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71987 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 72046 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72047 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 72106 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 352 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72107 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 72158 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 313 ttgagtaacgaaaacattggtgagaatc 340 |||||||||||||||||||||||||||| Sbjct: 43370 ttgagtaacgaaaacattggtgagaatc 43343
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 696 bits (351), Expect = 0.0 Identities = 465/503 (92%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 144903 tgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagctaag 144962 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 144963 gcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggttt 145022 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 145023 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcg 145082 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | |||||||| |||| ||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 145083 ccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggta 145142 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||| ||| ||||||| | | | ||| || || |||||||||||||| Sbjct: 145143 ggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcggaagc 145202 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 145203 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaag 145262 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 145263 ggttcctccgcaaggttcgtccacggagggtgagtcaggtcctaagatcaggccgagagg 145322 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||| |||||||||| ||| |||||||| ||||| |||||||||||| | |||||||| Sbjct: 145323 cgtagttgatggacaacgggttaatattcccgtactgccccttgttggtcccgagggacg 145382 Query: 481 gaggaggctaggttagccgaaag 503 ||||||||||||||||||||||| Sbjct: 145383 gaggaggctaggttagccgaaag 145405 Score = 696 bits (351), Expect = 0.0 Identities = 465/503 (92%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 87948 tgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagctaag 87889 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 87888 gcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggttt 87829 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 87828 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcg 87769 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | |||||||| |||| ||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 87768 ccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggta 87709 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||| ||| ||||||| | | | ||| || || |||||||||||||| Sbjct: 87708 ggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcggaagc 87649 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 87648 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaag 87589 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 87588 ggttcctccgcaaggttcgtccacggagggtgagtcaggtcctaagatcaggccgagagg 87529 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||||| |||||||||| ||| |||||||| ||||| |||||||||||| | |||||||| Sbjct: 87528 cgtagttgatggacaacgggttaatattcccgtactgccccttgttggtcccgagggacg 87469 Query: 481 gaggaggctaggttagccgaaag 503 ||||||||||||||||||||||| Sbjct: 87468 gaggaggctaggttagccgaaag 87446
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 694 bits (350), Expect = 0.0 Identities = 476/512 (92%), Gaps = 12/512 (2%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 491 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||| |||||||||||||||||||| ||||||| | |||||||||||||||| Sbjct: 492 gcccctaaatgatcgctcagtgataaaggaggtaggggtgcga-gacagccaggaggttt 550 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 551 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 610 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 611 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 670 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||| Sbjct: 671 ggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagc 730 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 ||||||||| | ||||| | ||||||||||||||||||||||||||||||||| ||| Sbjct: 731 gagaatgtc-acgtgagt---gcaaacattggtgagaatccaatgccccgaaaacctaag 786 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaa----ga--tcaggcc 414 | ||||||||||||||||||||||||||||||||||||||||||| || ||| ||| Sbjct: 787 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaaacgtgacgtca-gcc 845 Query: 415 gaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacgga 474 ||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | || Sbjct: 846 gaaaggcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccga 905 Query: 475 gggacggaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||||||||| Sbjct: 906 gggacggaggaggctaggttagccgaaagatg 937
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 692 bits (349), Expect = 0.0 Identities = 411/429 (95%), Gaps = 2/429 (0%) Strand = Plus / Plus Query: 78 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 137 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 138 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 197 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 198 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctt 257 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc-tt 178 Query: 258 agagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgag 317 ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 179 agagggaagcacccgcgcgagcgggggtggacgaagcggaagcgagaatgtcggcttgag 238 Query: 318 taacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggtt 377 ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 239 taacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggtt 298 Query: 378 cgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaac 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 cgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaac 358 Query: 438 aggtcaatattcctgtactaccccttgttggtacggagggacggaggaggctaggttagc 497 ||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 359 aggcgaatattcctgtactaccccttgttggtcccgagggacggaggaggctaggttagc 418 Query: 498 cgaaagatg 506 ||||||||| Sbjct: 419 cgaaagatg 427
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 686 bits (346), Expect = 0.0 Identities = 466/506 (92%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||| Sbjct: 127467 tgagacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaag 127408 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 127407 gcccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggttt 127348 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| || Sbjct: 127347 gcctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgctcttacg 127288 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||| ||||||||| ||||| | ||||||||||||||| ||||||||| |||||||| Sbjct: 127287 ccgaaaatgaacgggactaagtggtctgccgaagctgtgagatgtcaaaggacatcggta 127228 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||| | ||| |||||| ||| ||| || || |||||||||||||| Sbjct: 127227 ggggagcgttccgtatcagaaagaagcactagcgtgagcaggtgtggacgaagcggaagc 127168 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 127167 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 127108 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127107 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 127048 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||||| |||||||||| | |||||||| Sbjct: 127047 cgtagtcgatggacaacaggtgaatattcctgtactactccttgttggtcccgagggacg 126988 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 126987 gaggaggctaggttagccgaaagatg 126962 Score = 686 bits (346), Expect = 0.0 Identities = 466/506 (92%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||| Sbjct: 95980 tgagacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaag 96039 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 96040 gcccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggttt 96099 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| || Sbjct: 96100 gcctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgctcttacg 96159 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||| ||||||||| ||||| | ||||||||||||||| ||||||||| |||||||| Sbjct: 96160 ccgaaaatgaacgggactaagtggtctgccgaagctgtgagatgtcaaaggacatcggta 96219 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||| | ||| |||||| ||| ||| || || |||||||||||||| Sbjct: 96220 ggggagcgttccgtatcagaaagaagcactagcgtgagcaggtgtggacgaagcggaagc 96279 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 96280 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 96339 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96340 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 96399 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 ||||||||||||||||||||| |||||||||||||||| |||||||||| | |||||||| Sbjct: 96400 cgtagtcgatggacaacaggtgaatattcctgtactactccttgttggtcccgagggacg 96459 Query: 481 gaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||| Sbjct: 96460 gaggaggctaggttagccgaaagatg 96485
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 676 bits (341), Expect = 0.0 Identities = 470/512 (91%), Gaps = 7/512 (1%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 971 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaag 1030 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||| ||| |||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1031 gcccctaattgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 1090 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| ||| |||||||||||||| ||||||||||||| |||||| Sbjct: 1091 gcctagaagcagccacccttgaaatagtgcgtaatagcttactgatcgagcgctcttgcg 1150 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatg------tcaaaatgca 234 | |||||| ||||||||||||||||| ||||||||||||||||| | ||||| || Sbjct: 1151 ccgaagattaacggggctaagcgatccgccgaagctgtgggatgtaaaaataaaaataca 1210 Query: 235 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 294 ||||||||||||||||||||||||||||||||| | || ||| | ||| |||||| | Sbjct: 1211 tcggtaggggagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaaac 1270 Query: 295 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 354 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1271 ggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1330 Query: 355 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 414 || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1331 cctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 1390 Query: 415 gaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacgga 474 |||| | ||||||||||| |||||||| |||||| |||||||||||||||||||| | || Sbjct: 1391 gaaacg-gtagtcgatgggcaacaggtgaatatttctgtactaccccttgttggtcccga 1449 Query: 475 gggacggaggaggctaggttagccgaaagatg 506 ||||||||| |||||||||||||| ||||||| Sbjct: 1450 gggacggagcaggctaggttagccaaaagatg 1481
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 662 bits (334), Expect = 0.0 Identities = 334/334 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 835 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 836 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 895 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 896 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 955 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 956 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 1015 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1016 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 1075 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtg 334 |||||||||||||||||||||||||||||||||| Sbjct: 1076 gagaatgtcggcttgagtaacgaaaacattggtg 1109
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 636 bits (321), Expect = e-179 Identities = 384/405 (94%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 968 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 1027 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1028 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcaaagacagccaggaggttt 1087 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1088 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 1147 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 1148 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgta 1207 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||| ||||||||||||||| ||| |||| |||||||||||||| Sbjct: 1208 ggggagcgttccgccttaaagggaagcaaccgcgccagcaagggtggacgaagcggaagc 1267 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 || |||||| |||||||||||| ||||||||||||||||| |||||||| |||| | ||| Sbjct: 1268 gaaaatgtccgcttgagtaacgcaaacattggtgagaatctaatgcccccaaaaactaag 1327 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaa 405 | ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1328 ggttcctccgcaaggttcgtccacggagggtgagtcaaggcctaa 1372
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 624 bits (315), Expect = e-176 Identities = 458/503 (91%), Gaps = 2/503 (0%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||| |||||||||||||||||| |||||| |||||||| ||| ||||| |||| Sbjct: 5592 tgagacgatgagggataagcttcatcgtcaagaggggaacagcccagattaccagataag 5533 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||| ||||| || | ||||||||||||||||||||||| Sbjct: 5532 gcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagccaggaggttt 5473 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||| Sbjct: 5472 gcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgca 5413 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||| ||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 5412 ccgaagatgaacgggactaagcgatctgccgaagctgtgggatatctaaaaacatcggta 5353 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||||| | |||| |||||| ||||| ||| || || ||||||||||||| Sbjct: 5352 ggggagcgttccgtttcagagagaagcacccgcgcgagcaggtgtggacgaagcggaagt 5293 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 5292 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 5233 Query: 361 gtttcctccgcaaggttcgtcc-acggagggtgagtcagggcctaagatcaggccgaaag 419 | |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 5232 ggttcctccgcaaggttcgtccaacggggggtgagtcagggcctaagatcaggccgaaac 5173 Query: 420 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 479 | || ||||||||||||||||| ||||||||||||||| || |||||||| | ||||||| Sbjct: 5172 g-gttgtcgatggacaacaggtgaatattcctgtactatcctttgttggtcccgagggac 5114 Query: 480 ggaggaggctaggttagccgaaa 502 ||||||||||||||||||||||| Sbjct: 5113 ggaggaggctaggttagccgaaa 5091
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 615 bits (310), Expect = e-173 Identities = 461/509 (90%), Gaps = 3/509 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| |||||| |||||||| || ||||||||||| Sbjct: 958 tgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccagctaag 1017 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||| |||||||||| | ||||| ||||||||||||||||| Sbjct: 1018 gcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccaggaggttt 1077 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1078 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 1137 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgcatcgg 238 | ||||||||||||| ||||||| |||||||||||||||||||||| |||| |||||| Sbjct: 1138 ccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaagacatcgg 1197 Query: 239 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 298 ||||||||||||| || ||| | |||||| |||||||| | || |||||||||||| Sbjct: 1198 taggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaagcggaa 1257 Query: 299 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 358 | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1258 gtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 1317 Query: 359 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 418 ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1318 agggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaaa 1377 Query: 419 ggcgtagtcgatggacaacaggtcaatattcctgtactac-cccttgttggtacggaggg 477 |||| |||||||||||||||||| ||||||||||||| || |||||||| | ||||| Sbjct: 1378 ggcgcagtcgatggacaacaggttaatattcctgtaccacttatttgttggtcccgaggg 1437 Query: 478 acggaggaggctaggttagccgaaagatg 506 |||||| |||||| |||||||||| |||| Sbjct: 1438 acggagaaggctaagttagccgaaggatg 1466
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 605 bits (305), Expect = e-170 Identities = 455/503 (90%), Gaps = 4/503 (0%) Strand = Plus / Plus Query: 3 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 62 ||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||||| Sbjct: 1075 agacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaaggc 1134 Query: 63 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 122 |||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||| Sbjct: 1135 ccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggaggtttgc 1194 Query: 123 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 182 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1195 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 1254 Query: 183 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa--aatgcatcggta 240 ||||||||||||| ||||||| |||||||||||||||||||||| | | ||||||||| Sbjct: 1255 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtccattagggcatcggta 1314 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||| | | |||||| | | | || | || || ||||||||||||| Sbjct: 1315 ggggagcgttccgcaaacgggagaagcatcagtgtaaacaggtgtggacgaagcggaagt 1374 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1375 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 1434 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || Sbjct: 1435 ggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagatcatgccgaacgg 1494 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta--cggaggga 478 || ||||||||||||||||||||| |||||||||||||||||||| || | |||||| Sbjct: 1495 cgcagtcgatggacaacaggtcaagattcctgtactaccccttgtcggcaataagaggga 1554 Query: 479 cggaggaggctaggttagccgaa 501 |||||||||||| | |||||||| Sbjct: 1555 cggaggaggctaagctagccgaa 1577
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 605 bits (305), Expect = e-170 Identities = 344/357 (96%) Strand = Plus / Plus Query: 150 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 209 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 755 cgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgc 814 Query: 210 cgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaa 269 |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 cgaagctgcgggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcac 874 Query: 270 ccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacat 329 |||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 875 ccgcgagagcgggggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacat 934 Query: 330 tggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagg 389 ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 935 tggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggttcgtccacggagg 994 Query: 390 gtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattc 449 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 995 gtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattc 1054 Query: 450 ctgtactaccccttgttggtacggagggacggaggaggctaggttagccgaaagatg 506 |||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 1055 ctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagatg 1111
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 601 bits (303), Expect = e-169 Identities = 463/512 (90%), Gaps = 7/512 (1%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 138292 tgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaag 138233 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||| ||||||||||||||| | |||||||| || |||||||||||||| |||||||| Sbjct: 138232 gcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagccgggaggttt 138173 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||| |||||||||||||||| |||||||||||| ||||||||||||| ||||| | |||| Sbjct: 138172 gcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaagcgctcctgcg 138113 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa--atgcatcgg 238 | || |||||||||| ||||||| |||||||||||||||||||||| || || |||||| Sbjct: 138112 ccgaggatgaacgggactaagcggtctgccgaagctgtgggatgtcgaacaatacatcgg 138053 Query: 239 taggggagcgttccgccttagagg---gaagcaaccgcgaaagcgggggtcgacgaagcg 295 |||||||||||||||||| |||| |||||| | ||| ||| || | ||||||||| Sbjct: 138052 taggggagcgttccgcctcggaggagggaagcaccagcgcgagcaggtgcggacgaagcg 137993 Query: 296 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 355 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 137992 gaagcgagagtgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 137933 Query: 356 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 415 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137932 ccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 137873 Query: 416 aaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt-acgga 474 | ||||||||||||||||||||||| |||||||||||||||||| | |||||| |||| Sbjct: 137872 agaggcgtagtcgatggacaacaggcgaatattcctgtactacccatcgttggtcacgg- 137814 Query: 475 gggacggaggaggctaggttagccgaaagatg 506 |||||||||||||| ||||||||||| ||||| Sbjct: 137813 gggacggaggaggccaggttagccgagagatg 137782 Score = 601 bits (303), Expect = e-169 Identities = 463/512 (90%), Gaps = 7/512 (1%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 83585 tgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaag 83644 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||| ||||||||||||||| | |||||||| || |||||||||||||| |||||||| Sbjct: 83645 gcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagccgggaggttt 83704 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||| |||||||||||||||| |||||||||||| ||||||||||||| ||||| | |||| Sbjct: 83705 gcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaagcgctcctgcg 83764 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa--atgcatcgg 238 | || |||||||||| ||||||| |||||||||||||||||||||| || || |||||| Sbjct: 83765 ccgaggatgaacgggactaagcggtctgccgaagctgtgggatgtcgaacaatacatcgg 83824 Query: 239 taggggagcgttccgccttagagg---gaagcaaccgcgaaagcgggggtcgacgaagcg 295 |||||||||||||||||| |||| |||||| | ||| ||| || | ||||||||| Sbjct: 83825 taggggagcgttccgcctcggaggagggaagcaccagcgcgagcaggtgcggacgaagcg 83884 Query: 296 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 355 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 83885 gaagcgagagtgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 83944 Query: 356 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 415 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83945 ccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 84004 Query: 416 aaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt-acgga 474 | ||||||||||||||||||||||| |||||||||||||||||| | |||||| |||| Sbjct: 84005 agaggcgtagtcgatggacaacaggcgaatattcctgtactacccatcgttggtcacgg- 84063 Query: 475 gggacggaggaggctaggttagccgaaagatg 506 |||||||||||||| ||||||||||| ||||| Sbjct: 84064 gggacggaggaggccaggttagccgagagatg 84095
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 599 bits (302), Expect = e-168 Identities = 452/502 (90%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||||| Sbjct: 5007 tgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagctaag 5066 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||||| Sbjct: 5067 gcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggttt 5126 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 5127 gcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttgcg 5186 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| Sbjct: 5187 ccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcggta 5246 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||| ||| | |||||| | | | || | || || |||||||||||||| Sbjct: 5247 ggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaagc 5306 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 5307 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 5366 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5367 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagattaggccgaaagg 5426 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 || ||||||||||||||||| ||||||||||||| ||||||| || || | |||||||| Sbjct: 5427 cgcagtcgatggacaacaggcgaatattcctgtaccaccccttatttgtcccgagggacg 5486 Query: 481 gaggaggctaggttagccgaaa 502 ||| ||||||| |||||||||| Sbjct: 5487 gagaaggctagattagccgaaa 5508
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 599 bits (302), Expect = e-168 Identities = 452/502 (90%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||||| Sbjct: 974 tgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagctaag 1033 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||||| Sbjct: 1034 gcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggttt 1093 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 1094 gcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttgcg 1153 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| Sbjct: 1154 ccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcggta 1213 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||| ||| | |||||| | | | || | || || |||||||||||||| Sbjct: 1214 ggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaagc 1273 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 1274 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 1333 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1334 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagattaggccgaaagg 1393 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 || ||||||||||||||||| ||||||||||||| ||||||| || || | |||||||| Sbjct: 1394 cgcagtcgatggacaacaggcgaatattcctgtaccaccccttatttgtcccgagggacg 1453 Query: 481 gaggaggctaggttagccgaaa 502 ||| ||||||| |||||||||| Sbjct: 1454 gagaaggctagattagccgaaa 1475
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 599 bits (302), Expect = e-168 Identities = 459/509 (90%), Gaps = 3/509 (0%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| |||||| |||||||| || ||||||||||| Sbjct: 124307 tgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccagctaag 124248 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||| |||||||||| | ||||| ||||||||||||||||| Sbjct: 124247 gcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccaggaggttt 124188 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 124187 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 124128 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gcatcgg 238 | ||||||||||||| ||||||| ||||||||||||||||||||||| | |||||| Sbjct: 124127 ccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgacatcgg 124068 Query: 239 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 298 ||||||||||||| || ||| | |||||| |||||||| | || |||||||||||| Sbjct: 124067 taggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaagcggaa 124008 Query: 299 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 358 | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 124007 gtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 123948 Query: 359 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 418 ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 123947 agggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaaa 123888 Query: 419 ggcgtagtcgatggacaacaggtcaatattcctgtactac-cccttgttggtacggaggg 477 |||| |||||||||||||||||| ||||||||||||| || |||||||| | ||||| Sbjct: 123887 ggcgcagtcgatggacaacaggtgaatattcctgtaccacttatttgttggtcccgaggg 123828 Query: 478 acggaggaggctaggttagccgaaagatg 506 |||||| |||||| |||||||||| |||| Sbjct: 123827 acggagaaggctaagttagccgaaggatg 123799 Score = 599 bits (302), Expect = e-168 Identities = 459/509 (90%), Gaps = 3/509 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| |||||| |||||||| || ||||||||||| Sbjct: 95559 tgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccagctaag 95618 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||| |||||||||| | ||||| ||||||||||||||||| Sbjct: 95619 gcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccaggaggttt 95678 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 95679 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 95738 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gcatcgg 238 | ||||||||||||| ||||||| ||||||||||||||||||||||| | |||||| Sbjct: 95739 ccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgacatcgg 95798 Query: 239 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 298 ||||||||||||| || ||| | |||||| |||||||| | || |||||||||||| Sbjct: 95799 taggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaagcggaa 95858 Query: 299 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 358 | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 95859 gtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 95918 Query: 359 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 418 ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 95919 agggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaaa 95978 Query: 419 ggcgtagtcgatggacaacaggtcaatattcctgtactac-cccttgttggtacggaggg 477 |||| |||||||||||||||||| ||||||||||||| || |||||||| | ||||| Sbjct: 95979 ggcgcagtcgatggacaacaggtgaatattcctgtaccacttatttgttggtcccgaggg 96038 Query: 478 acggaggaggctaggttagccgaaagatg 506 |||||| |||||| |||||||||| |||| Sbjct: 96039 acggagaaggctaagttagccgaaggatg 96067
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 597 bits (301), Expect = e-167 Identities = 454/503 (90%), Gaps = 4/503 (0%) Strand = Plus / Plus Query: 3 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 62 ||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 958 agacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccagctaaggc 1017 Query: 63 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 122 |||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||| Sbjct: 1018 ccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggaggtttgc 1077 Query: 123 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 182 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1078 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 1137 Query: 183 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgcatcggta 240 ||||||||||||| ||||||| |||||||||||||||||||||| | ||||||||| Sbjct: 1138 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgttagggcatcggta 1197 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||| || | |||||| | | | || | || || ||||||||||||| Sbjct: 1198 ggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtggacgaagcggaagt 1257 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1258 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 1317 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || Sbjct: 1318 ggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagatcatgccgaacgg 1377 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta--cggaggga 478 || ||||||||||||||||||||| ||||||||||||| |||| | || | |||||| Sbjct: 1378 cgcagtcgatggacaacaggtcaagattcctgtactactccttatcggcaataagaggga 1437 Query: 479 cggaggaggctaggttagccgaa 501 |||||||||||| | |||||||| Sbjct: 1438 cggaggaggctaagctagccgaa 1460
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 597 bits (301), Expect = e-167 Identities = 454/503 (90%), Gaps = 4/503 (0%) Strand = Plus / Plus Query: 3 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 62 ||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 971 agacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccagctaaggc 1030 Query: 63 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 122 |||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||| Sbjct: 1031 ccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggaggtttgc 1090 Query: 123 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 182 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1091 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 1150 Query: 183 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgcatcggta 240 ||||||||||||| ||||||| |||||||||||||||||||||| | ||||||||| Sbjct: 1151 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgttagggcatcggta 1210 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||| || | |||||| | | | || | || || ||||||||||||| Sbjct: 1211 ggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtggacgaagcggaagt 1270 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1271 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 1330 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || Sbjct: 1331 ggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagatcatgccgaacgg 1390 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta--cggaggga 478 || ||||||||||||||||||||| ||||||||||||| |||| | || | |||||| Sbjct: 1391 cgcagtcgatggacaacaggtcaagattcctgtactactccttatcggcaataagaggga 1450 Query: 479 cggaggaggctaggttagccgaa 501 |||||||||||| | |||||||| Sbjct: 1451 cggaggaggctaagctagccgaa 1473
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 591 bits (298), Expect = e-166 Identities = 451/502 (89%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||||| Sbjct: 974 tgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagctaag 1033 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| |||||| Sbjct: 1034 gcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggttt 1093 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 1094 gcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttgcg 1153 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| Sbjct: 1154 ccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcggta 1213 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||| ||| | |||||| | | | || | || || |||||||||||||| Sbjct: 1214 ggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaagc 1273 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 1274 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 1333 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1334 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagattaggccgaaagg 1393 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 || ||||||||||||||||| ||||||||||||| ||||||| || || | |||||||| Sbjct: 1394 cgcagtcgatggacaacaggcgaatattcctgtaccaccccttatttgtcccgagggacg 1453 Query: 481 gaggaggctaggttagccgaaa 502 ||| ||||||| |||||||||| Sbjct: 1454 gagaaggctagattagccgaaa 1475
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 575 bits (290), Expect = e-161 Identities = 449/502 (89%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||||| Sbjct: 969 tgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagctaag 1028 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||| ||||| |||| ||||||||||||| ||||||||||| |||||||||| Sbjct: 1029 gcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggttt 1088 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || ||| Sbjct: 1089 gcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcgcg 1148 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||| ||| ||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 1149 ccgaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatcggta 1208 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||| ||| | |||||| | | | || | | || |||||||||||||| Sbjct: 1209 ggggagcgttccgctctagggagaagcatcagtgtaaacagatgtggacgaagcggaagc 1268 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 1269 gagaatgtcggcttgagtaacggaaacattggtgagaatccaatgccccgaaaacctaag 1328 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 1329 ggttcctccgcaaggttcgtccacggagggttagtcagggcctaagattaggccgaaagg 1388 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 || ||||||||||||||||| ||||||||||||| ||||||| || || | |||||||| Sbjct: 1389 cgcagtcgatggacaacaggcgaatattcctgtaccaccccttatttgtcccgagggacg 1448 Query: 481 gaggaggctaggttagccgaaa 502 ||| ||||||| || ||||||| Sbjct: 1449 gagaaggctagattggccgaaa 1470
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 539 bits (272), Expect = e-150 Identities = 381/411 (92%), Gaps = 6/411 (1%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 991 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 1050 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1051 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 1110 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1111 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 1170 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1171 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggta 1230 Query: 241 ggggagcgttccgccttagagggaagcaac--cgcgaaagcgggggtcgacgaagcgg-a 297 |||||||||||||||||| | |||| || | |||||| |||| | |||||| ||| | Sbjct: 1231 ggggagcgttccgccttaaaaggaaacacccgcgcgaacaaggggttggacgaaacggaa 1290 Query: 298 agcgagaatgtcggcttgagtaacg-aaaaca-ttggtgagaatccaatgccccgaaaac 355 | | ||||||||||||||||||||| |||||| |||||||||||| |||||||||||||| Sbjct: 1291 accaagaatgtcggcttgagtaacgcaaaacatttggtgagaatctaatgccccgaaaac 1350 Query: 356 ccaaggtttcctccgc-aaggttcgtccacggagggtgagtcagggcctaa 405 | || | ||||||| | |||||||||||||||||||||||||| ||||||| Sbjct: 1351 ctaaaggttcctccccaaaggttcgtccacggagggtgagtcaaggcctaa 1401
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 533 bits (269), Expect = e-148 Identities = 414/462 (89%), Gaps = 4/462 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| | ||||||||||||| |||||| ||||||| Sbjct: 915 tgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagctaag 974 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 975 gccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggaggttt 1034 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1035 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 1094 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc----aaaatgcatc 236 | ||||||||| ||| ||||||| |||||||||||||||||||||| | || ||| Sbjct: 1095 ccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtctattataagatatc 1154 Query: 237 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 296 |||||||||||||||||||||||| |||||| ||| |||| | || |||||||||| Sbjct: 1155 ggtaggggagcgttccgccttagatagaagcattagcgtaagcagatgtggacgaagcgg 1214 Query: 297 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 356 ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1215 aagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 1274 Query: 357 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 416 ||||| ||||||||||||| ||||||||||||||||||||||| |||||| | || || | Sbjct: 1275 caagggttcctccgcaaggctcgtccacggagggtgagtcaggacctaaggtgagaccaa 1334 Query: 417 aaggcgtagtcgatggacaacaggtcaatattcctgtactac 458 | || | | | |||||||||||||| ||||||||||||||| Sbjct: 1335 atggtgcaattgatggacaacaggtttatattcctgtactac 1376
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 529 bits (267), Expect = e-147 Identities = 438/495 (88%), Gaps = 10/495 (2%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||| |||||||||||||||||||||| |||||| |||||||| |||||||||||||| Sbjct: 1006 tgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcaccagctaag 1065 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||||||||| Sbjct: 1066 gcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccaggaggttt 1125 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 1126 gcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgctcttgcg 1185 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||| ||||||||| ||||||||| |||||||||||||||||| | |||||||| Sbjct: 1186 ccgaatatgaacgggaataagcgatccgccgaagctgtgggatgtaa-----catcggta 1240 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||| |||||| ||||||||| | || ||| | ||| || ||||| |||| Sbjct: 1241 ggggagcgttctgccttatagggaagcacctgcacgagcagtggtggatgaagcagaagt 1300 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 1301 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 1360 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | ||||| ||||||||||||||||| ||||||||||||| |||||||||| | |||||| Sbjct: 1361 ggttccttcgcaaggttcgtccacgtagggtgagtcaggtcctaagatcatactgaaagg 1420 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacg 480 |||| ||||||||| |||| ||||||||||||||||||| | ||| |||||||| Sbjct: 1421 tttagttgatggacaataggttaatattcctgtactaccccct-----taccgagggacg 1475 Query: 481 gaggaggctaggtta 495 ||| ||||||||||| Sbjct: 1476 gagtaggctaggtta 1490
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 595 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 654 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 655 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 714 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 715 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 774 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 834 Query: 241 ggggagcgttccgccttagagggaa 265 ||||||||||||||||||||||||| Sbjct: 835 ggggagcgttccgccttagagggaa 859
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 486 bits (245), Expect = e-134 Identities = 401/453 (88%) Strand = Plus / Plus Query: 3 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 62 ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| |||||| Sbjct: 3992 agacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccagttaaggc 4051 Query: 63 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 122 |||||||| | |||| |||| |||||||||| | ||||| ||||||||||||||||||| Sbjct: 4052 ccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccaggaggtttgc 4111 Query: 123 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 182 |||||||||| | |||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 4112 ttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgcc 4171 Query: 183 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 242 ||||||||||||| ||||||||| ||||||| ||||||||||| || | |||||||||| Sbjct: 4172 gaagatgaacgggactaagcgatttgccgaaactgtgggatgtttaagtacatcggtagg 4231 Query: 243 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 302 ||||||||| || ||||| |||||| | | |||| | | || |||||||| |||| || Sbjct: 4232 ggagcgttctgctatagagtgaagcatcagtgaaaacagatgtggacgaagcagaagtga 4291 Query: 303 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 362 |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||| Sbjct: 4292 gaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaacctaaggg 4351 Query: 363 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 422 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4352 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaaaggcg 4411 Query: 423 tagtcgatggacaacaggtcaatattcctgtac 455 | |||||||| ||| ||||||||||||||||| Sbjct: 4412 caatcgatggataactggtcaatattcctgtac 4444
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 482 bits (243), Expect = e-133 Identities = 407/461 (88%), Gaps = 3/461 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| |||| Sbjct: 920 tgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccagttaag 979 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||| |||||||||||| ||| | ||||||||||||||||||||||| Sbjct: 980 gcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccaggaggttt 1039 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1040 gcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 1099 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat---gcatcg 237 | ||||||||| ||| ||||||| ||||||||||||||| ||||| |||| ||||| Sbjct: 1100 ccgaagatgaatgggactaagcggtctgccgaagctgtgagatgtttaaatataacatcg 1159 Query: 238 gtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgga 297 ||||||||||||||||| |||| |||||| ||| ||||| || ||| ||||||| Sbjct: 1160 gtaggggagcgttccgcattaggttgaagcactagcgtaagcgaatgtggacaaagcgga 1219 Query: 298 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccc 357 || |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||| Sbjct: 1220 agtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaaccc 1279 Query: 358 aaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaa 417 |||| ||||| || ||||||||||| || |||||||||||| |||||| | | ||| || Sbjct: 1280 aaggattcctacggaaggttcgtccgcgtagggtgagtcagaacctaaggtaaagccaaa 1339 Query: 418 aggcgtagtcgatggacaacaggtcaatattcctgtactac 458 ||||||||||||||| ||||||| |||||||||||||||| Sbjct: 1340 cggcgtagtcgatggataacaggttaatattcctgtactac 1380
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 476 bits (240), Expect = e-131 Identities = 406/461 (88%), Gaps = 4/461 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 956 tgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagctaag 1015 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||||||| Sbjct: 1016 gcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggaggttt 1075 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| ||||||||||||||||||||||| || ||||| |||||| Sbjct: 1076 gcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcttgcg 1135 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg----catc 236 | ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| ||| Sbjct: 1136 ccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggagatatc 1195 Query: 237 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 296 |||||||||||||||||| ||| | |||||| | ||| ||| | || |||||||||| Sbjct: 1196 ggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaagcgg 1255 Query: 297 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 356 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1256 aagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaacc 1315 Query: 357 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 416 |||| ||||||||||||| ||||||||||||||| ||||||| |||||| ||||||| Sbjct: 1316 taagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaaggccga 1375 Query: 417 aaggcgtagtcgatggacaacaggtcaatattcctgtacta 457 |||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1376 aaggcgtattcgatggacaacaggttaatattcctgtacta 1416
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 476 bits (240), Expect = e-131 Identities = 406/461 (88%), Gaps = 4/461 (0%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 114706 tgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagctaag 114647 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||||||| Sbjct: 114646 gcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggaggttt 114587 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| ||||||||||||||||||||||| || ||||| |||||| Sbjct: 114586 gcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcttgcg 114527 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg----catc 236 | ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| ||| Sbjct: 114526 ccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggagatatc 114467 Query: 237 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 296 |||||||||||||||||| ||| | |||||| | ||| ||| | || |||||||||| Sbjct: 114466 ggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaagcgg 114407 Query: 297 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 356 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 114406 aagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaacc 114347 Query: 357 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 416 |||| ||||||||||||| ||||||||||||||| ||||||| |||||| ||||||| Sbjct: 114346 taagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaaggccga 114287 Query: 417 aaggcgtagtcgatggacaacaggtcaatattcctgtacta 457 |||||||| |||||||||||||||| ||||||||||||||| Sbjct: 114286 aaggcgtattcgatggacaacaggttaatattcctgtacta 114246 Score = 476 bits (240), Expect = e-131 Identities = 406/461 (88%), Gaps = 4/461 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 87282 tgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagctaag 87341 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||||||| Sbjct: 87342 gcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggaggttt 87401 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| ||||||||||||||||||||||| || ||||| |||||| Sbjct: 87402 gcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcttgcg 87461 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg----catc 236 | ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| ||| Sbjct: 87462 ccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggagatatc 87521 Query: 237 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 296 |||||||||||||||||| ||| | |||||| | ||| ||| | || |||||||||| Sbjct: 87522 ggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaagcgg 87581 Query: 297 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 356 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 87582 aagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaacc 87641 Query: 357 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 416 |||| ||||||||||||| ||||||||||||||| ||||||| |||||| ||||||| Sbjct: 87642 taagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaaggccga 87701 Query: 417 aaggcgtagtcgatggacaacaggtcaatattcctgtacta 457 |||||||| |||||||||||||||| ||||||||||||||| Sbjct: 87702 aaggcgtattcgatggacaacaggttaatattcctgtacta 87742
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 462 bits (233), Expect = e-127 Identities = 398/453 (87%) Strand = Plus / Plus Query: 3 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 62 ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| |||||| Sbjct: 958 agacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccagttaaggc 1017 Query: 63 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 122 |||||||| | |||| |||| |||||||||| | ||||| ||||||||||||||||||| Sbjct: 1018 ccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccaggaggtttgc 1077 Query: 123 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 182 |||||||||| | |||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1078 ttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgcc 1137 Query: 183 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 242 ||||||||| ||| ||||||||| ||||||| ||||||||||| || | |||||||||| Sbjct: 1138 gaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaagtacatcggtagg 1197 Query: 243 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 302 ||||||||| || |||| |||||| | | |||| | | || |||||||| |||| || Sbjct: 1198 ggagcgttctgctatagattgaagcatcagtgaaaacagatgtggacgaagcagaagtga 1257 Query: 303 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 362 |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||| Sbjct: 1258 gaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaacctaaggg 1317 Query: 363 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 422 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1318 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaaaggcg 1377 Query: 423 tagtcgatggacaacaggtcaatattcctgtac 455 | |||||||| ||| ||| ||||||||||||| Sbjct: 1378 caatcgatggataacgggttaatattcctgtac 1410
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 462 bits (233), Expect = e-127 Identities = 399/453 (88%), Gaps = 1/453 (0%) Strand = Plus / Plus Query: 3 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 62 ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| |||||| Sbjct: 958 agacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccagttaaggc 1017 Query: 63 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 122 |||||||| | |||| |||| |||||||||| | ||||| ||||||||||||||||||| Sbjct: 1018 ccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccaggaggtttgc 1077 Query: 123 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 182 |||||||||| | |||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1078 ttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgcc 1137 Query: 183 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 242 ||||||||| ||| ||||||||| ||||||| ||||||||||| || | |||||||||| Sbjct: 1138 gaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaa-tacatcggtagg 1196 Query: 243 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 302 ||||||||| || ||||| |||||| | | |||| | | || |||||||| |||| || Sbjct: 1197 ggagcgttctgctatagagtgaagcaccagtgaaaacagatgtggacgaagcagaagtga 1256 Query: 303 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 362 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1257 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 1316 Query: 363 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 422 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1317 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgacaggcg 1376 Query: 423 tagtcgatggacaacaggtcaatattcctgtac 455 | |||||||| ||| ||| ||||||||||||| Sbjct: 1377 caatcgatggataacgggttaatattcctgtac 1409
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 458 bits (231), Expect = e-126 Identities = 370/410 (90%), Gaps = 6/410 (1%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 991 tgagacgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaag 1050 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 1051 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcacagacagccaagaggttt 1110 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||| |||||||||||||| ||||||||||||||| |||||||||||||||| |||||| Sbjct: 1111 gcctaaaagcagccacccttgaaagagtgcgtaataactcactgatcgagcgctcttgcg 1170 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 1171 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgta 1230 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||| ||||| ||||||||| |||| ||| |||| |||||| | | | | Sbjct: 1231 ggggagcgttcccccttatagggaagcacccgccccagcaagggtggacgaaaccg-atc 1289 Query: 301 gagaatgtcggcttgagtaacgaaaaca-ttggtgagaatccaatgccccgaaaacccaa 359 | |||||| ||||||||| ||||| ||||||||||||||||||||| |||||| || Sbjct: 1290 taaaatgtccccttgagtaaaccaaacatttggtgagaatccaatgcccccaaaacctaa 1349 Query: 360 ggtttcctccgc-aaggttcgtccacgga--gggtgagtc-agggcctaa 405 || ||||||| | |||||||||||||||| ||||||||| ||||||||| Sbjct: 1350 gggttcctccccaaaggttcgtccacggatggggtgagtcaagggcctaa 1399
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 430 bits (217), Expect = e-117 Identities = 244/253 (96%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130820 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 130761 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 130760 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 130701 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 130700 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 130641 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||| Sbjct: 130640 ccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaaaacatcggta 130581 Query: 241 ggggagcgttccg 253 ||||||||||||| Sbjct: 130580 ggggagcgttccg 130568 Score = 430 bits (217), Expect = e-117 Identities = 244/253 (96%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102625 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 102684 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 102685 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 102744 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 102745 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 102804 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||| Sbjct: 102805 ccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaaaacatcggta 102864 Query: 241 ggggagcgttccg 253 ||||||||||||| Sbjct: 102865 ggggagcgttccg 102877 Score = 389 bits (196), Expect = e-105 Identities = 214/220 (97%) Strand = Plus / Minus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130534 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 130475 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130474 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 130415 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgtt 466 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 130414 atcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgtt 130355 Query: 467 ggtacggagggacggaggaggctaggttagccgaaagatg 506 ||| | |||||||||||||||||||||||||||||||||| Sbjct: 130354 ggtcccgagggacggaggaggctaggttagccgaaagatg 130315 Score = 389 bits (196), Expect = e-105 Identities = 214/220 (97%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 102911 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 102970 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102971 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 103030 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgtt 466 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 103031 atcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgtt 103090 Query: 467 ggtacggagggacggaggaggctaggttagccgaaagatg 506 ||| | |||||||||||||||||||||||||||||||||| Sbjct: 103091 ggtcccgagggacggaggaggctaggttagccgaaagatg 103130
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 426 bits (215), Expect = e-116 Identities = 257/271 (94%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 985 tgagacgatgggggataagcttcatcttccagagggaaacagcccggatcaccagctaag 1044 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| Sbjct: 1045 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcaaagacagccacgaggttt 1104 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1105 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 1164 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | || |||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 1165 cccaaaatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaatgcatcggta 1224 Query: 241 ggggagcgttccgccttagagggaagcaacc 271 ||||||||||||||| || |||||| ||||| Sbjct: 1225 ggggagcgttccgccctaaagggaaacaacc 1255 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 324 aaacattggtgagaatccaatgccccgaaaa 354 ||||| ||||||||||| ||||||||||||| Sbjct: 1311 aaacaatggtgagaatctaatgccccgaaaa 1341
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 422 bits (213), Expect = e-115 Identities = 252/265 (95%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 979 tgagacaatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 1038 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||| ||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 1039 gcccctaaatgaccgctcaatgataaaggaggtaggggtgcacagacagccacgaggttt 1098 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1099 gcctataagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 1158 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 1159 cccaagatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaatgcatcggta 1218 Query: 241 ggggagcgttccgccttagagggaa 265 |||||||||||| |||||||||||| Sbjct: 1219 ggggagcgttcccccttagagggaa 1243 Score = 77.8 bits (39), Expect = 3e-11 Identities = 74/83 (89%), Gaps = 2/83 (2%) Strand = Plus / Plus Query: 311 gcttgagtaacgaaaacattggtgagaatccaatg-ccccgaaaacccaaggtttcctcc 369 |||||||||||| ||||| ||||||||||| |||| ||||||||| | |||| ||||||| Sbjct: 1288 gcttgagtaacgcaaacaatggtgagaatctaatgcccccgaaaaactaagggttcctcc 1347 Query: 370 gc-aaggttcgtccacggagggt 391 | |||||||||||||||||||| Sbjct: 1348 ccaaaggttcgtccacggagggt 1370
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 422 bits (213), Expect = e-115 Identities = 360/405 (88%), Gaps = 3/405 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 990 tgagaccatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaag 1049 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 1050 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaagaggttt 1109 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 1110 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatccagcgctcttgcg 1169 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | || ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 1170 cccaaaatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgta 1229 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||| ||||| |||||| || || | | | |||| ||| || ||||| | Sbjct: 1230 ggggagcgttcccccttaaagggaaacaccccccccaacatgggtggaccaaacggaaac 1289 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg-aaaacccaa 359 |||||||| || | ||||||| ||||||||||||||||| |||||||| |||| | || Sbjct: 1290 cagaatgtccgccttagtaacgcaaacattggtgagaatctaatgccccccaaaaactaa 1349 Query: 360 ggtttcctccgcaa-ggttcgtccacgga-gggtgagtcagggcc 402 | ||||||| ||| ||||||||||| || |||||||||| |||| Sbjct: 1350 aggttcctccccaaaggttcgtccaccgaggggtgagtcaaggcc 1394
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 420 bits (212), Expect = e-114 Identities = 215/216 (99%) Strand = Plus / Minus Query: 291 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634548 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634489 Query: 351 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634488 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5634429 Query: 411 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 470 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634428 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 5634369 Query: 471 cggagggacggaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||||||||||||| Sbjct: 5634368 cggagggacggaggaggctaggttagccgaaagatg 5634333
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 420 bits (212), Expect = e-114 Identities = 254/268 (94%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 977 tgagacgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaag 1036 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1037 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 1096 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1097 gcctaaaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 1156 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | |||||||||||||||||| |||||||||||||||||||||||| |||| |||||||| Sbjct: 1157 ccgaagatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaaaacatcggta 1216 Query: 241 ggggagcgttccgccttagagggaagca 268 ||||||||||||| |||| |||||||| Sbjct: 1217 ggggagcgttccgtgttagggggaagca 1244
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 420 bits (212), Expect = e-114 Identities = 215/216 (99%) Strand = Plus / Minus Query: 291 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634537 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634478 Query: 351 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634477 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5634418 Query: 411 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 470 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634417 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 5634358 Query: 471 cggagggacggaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||||||||||||| Sbjct: 5634357 cggagggacggaggaggctaggttagccgaaagatg 5634322
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 420 bits (212), Expect = e-114 Identities = 215/216 (99%) Strand = Plus / Plus Query: 291 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18337 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 18396 Query: 351 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18397 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 18456 Query: 411 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 470 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18457 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 18516 Query: 471 cggagggacggaggaggctaggttagccgaaagatg 506 |||||||||||||||||||||||||||||||||||| Sbjct: 18517 cggagggacggaggaggctaggttagccgaaagatg 18552
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 408 bits (206), Expect = e-111 Identities = 258/274 (94%), Gaps = 1/274 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 952 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 1011 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1012 gcccctaaatgaccgcccagtgataaaggaggtaggggtgcagagacagccaggaggttt 1071 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1072 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 1131 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| Sbjct: 1132 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaaacatccgta 1191 Query: 241 -ggggagcgttccgccttagagggaagcaaccgc 273 ||| ||||||||| |||| |||||||| |||| Sbjct: 1192 tgggaagcgttccgtgttagggggaagcatccgc 1225
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 406 bits (205), Expect = e-110 Identities = 370/425 (87%), Gaps = 5/425 (1%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 2517 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggcccctaa 2576 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 || | ||| |||||||||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 2577 ataattgctaagtgataaaggaggtgggaatgcatagacaaccaggaggtttgcttagaa 2636 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 ||||| |||||||||||||||||||||||||||||| || || | | ||||| ||| || Sbjct: 2637 gcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcctgcgccgaaaat 2696 Query: 189 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 248 ||||||| |||||| || ||||||||||||||||| ||| ||||||||||||||| Sbjct: 2697 gaacgggactaagcaatttgccgaagctgtgggat-----aatttatcggtaggggagcg 2751 Query: 249 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 308 ||| || ||||| |||||| ||| ||||||| || |||||||| |||| |||||||| Sbjct: 2752 ttctgcattagattgaagcattagcgtaagcgggtgtggacgaagcagaagtgagaatgt 2811 Query: 309 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 368 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2812 cggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggtttcctc 2871 Query: 369 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 428 | ||||||||||| |||||||||||||||| |||||| |||| |||| ||||||||| Sbjct: 2872 tggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctgaaaagcgtagtcg 2931 Query: 429 atgga 433 ||||| Sbjct: 2932 atgga 2936
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 404 bits (204), Expect = e-109 Identities = 219/224 (97%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 508 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 509 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 568 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 569 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 628 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 224 | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 672
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 404 bits (204), Expect = e-109 Identities = 235/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 177815 tgagacgatgggggataagcttcatcgtcgagagggaaagagcccggatcaccagctaag 177874 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 177875 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 177934 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 177935 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 177994 Query: 181 ctgaagatgaacggggctaagcgat-ctgccgaagctgtgggatgtcaaaatgcatcggt 239 | ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 177995 ccgaagatgaacggggctaagcgatcctgccgaagctgtgggatgtcaaaatacatcggc 178054 Query: 240 aggg 243 |||| Sbjct: 178055 aggg 178058 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 480 ggaggaggctaggttagccgaaagatg 506 ||||||||||||||||||||||||||| Sbjct: 393068 ggaggaggctaggttagccgaaagatg 393094 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Plus Query: 105 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 164 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Plus Query: 105 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 164 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 59 aggcccctaaatgaccgctcag 80 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 gtcgagagggaaacagcccggatc 50 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 gtcgagagggaaacagcccggatc 50 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 400 bits (202), Expect = e-108 Identities = 316/354 (89%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||| | |||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 2850 tgagacgacgagggataagcttcatcgtcgagagggaaacaacctggatcaccagctaag 2791 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2790 gcccctaaatgactgctcagtgataaaggaggtaggggtgcaaagacagccaggaggttt 2731 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||| |||||||| ||| |||||||||||||||||| ||||||||| ||||| Sbjct: 2730 gcctagaagcaaccacccttgaaaaagtgcgtaatagctcactaatcgagcgcacttgca 2671 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | |||||||| ||||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 2670 ccaaagatgaattgggctaagcgatctgttgaagctatgggatgtcaaaatgcatcgata 2611 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 |||||||||||||||||||||||||||| | || || | ||| || || |||||||| Sbjct: 2610 ggggagcgttccgccttagagggaagcacctgcacgagtagtggtggaagaggcggaagc 2551 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 354 | |||||||||||| ||| | ||||||||||||||||||||||||| ||||| Sbjct: 2550 gggaatgtcggcttttttaaggcaaacattggtgagaatccaatgccctgaaaa 2497 Score = 182 bits (92), Expect = 7e-43 Identities = 128/140 (91%) Strand = Plus / Minus Query: 363 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 422 |||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||| | Sbjct: 2482 ttcctccgcaaggttcatccacggagggtgagttagggcctaagattaggccgaaaggtg 2423 Query: 423 tagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggacgga 482 |||||||||||||| |||| |||||||| |||||||| ||||||||| | |||| ||||| Sbjct: 2422 tagtcgatggacaagaggtgaatattccagtactacctcttgttggtcccgaggtacgga 2363 Query: 483 ggaggctaggttagccgaaa 502 ||||||||||||||| |||| Sbjct: 2362 ggaggctaggttagcagaaa 2343
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 389 bits (196), Expect = e-105 Identities = 385/447 (86%), Gaps = 2/447 (0%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 189884 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggcccctaa 189943 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 || | ||| |||| |||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 189944 ataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggaggtttgcttagaa 190003 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 ||||| |||||||||||||||||||||||||||||| || || | | ||||| ||| || Sbjct: 190004 gcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcctgcgccgaaaat 190063 Query: 189 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 248 ||||||| ||||| || ||||||||||||||||||| || |||||||||||||||| Sbjct: 190064 gaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcggtaggggagcg 190121 Query: 249 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 308 ||| | |||| |||||| ||||||||||| || ||| || | |||| |||||||| Sbjct: 190122 ttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacagaagtgagaatgt 190181 Query: 309 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 368 |||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 190182 cggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggattcctc 190241 Query: 369 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 428 || ||||||||||| |||||||||||||||| |||||| |||| |||| ||||||||| Sbjct: 190242 cggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctgaaaagcgtagtcg 190301 Query: 429 atggacaacaggtcaatattcctgtac 455 ||||| ||||||| ||||||||||||| Sbjct: 190302 atggataacaggttaatattcctgtac 190328 Score = 389 bits (196), Expect = e-105 Identities = 385/447 (86%), Gaps = 2/447 (0%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 151311 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggcccctaa 151370 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 || | ||| |||| |||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 151371 ataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggaggtttgcttagaa 151430 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 ||||| |||||||||||||||||||||||||||||| || || | | ||||| ||| || Sbjct: 151431 gcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcctgcgccgaaaat 151490 Query: 189 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 248 ||||||| ||||| || ||||||||||||||||||| || |||||||||||||||| Sbjct: 151491 gaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcggtaggggagcg 151548 Query: 249 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 308 ||| | |||| |||||| ||||||||||| || ||| || | |||| |||||||| Sbjct: 151549 ttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacagaagtgagaatgt 151608 Query: 309 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 368 |||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 151609 cggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggattcctc 151668 Query: 369 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 428 || ||||||||||| |||||||||||||||| |||||| |||| |||| ||||||||| Sbjct: 151669 cggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctgaaaagcgtagtcg 151728 Query: 429 atggacaacaggtcaatattcctgtac 455 ||||| ||||||| ||||||||||||| Sbjct: 151729 atggataacaggttaatattcctgtac 151755
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 381 bits (192), Expect = e-102 Identities = 201/204 (98%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 122235 tgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcaccagctaag 122176 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 122175 gcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagccaggaggttt 122116 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 122115 gcctagaagcagccaccctttaaagagtgcgtaatagctcactaatcgagcgcccttgcg 122056 Query: 181 ctgaagatgaacggggctaagcga 204 |||||||||||||||||||||||| Sbjct: 122055 ctgaagatgaacggggctaagcga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 381 bits (192), Expect = e-102 Identities = 201/204 (98%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12824776 tgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcaccagctaag 12824717 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 12824716 gcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagccaggaggttt 12824657 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 12824656 gcctagaagcagccaccctttaaagagtgcgtaatagctcactaatcgagcgcccttgcg 12824597 Query: 181 ctgaagatgaacggggctaagcga 204 |||||||||||||||||||||||| Sbjct: 12824596 ctgaagatgaacggggctaagcga 12824573 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 362 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 413 |||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 2412040 tttcctccgcaaggttcgtccacggagggtgagttagggcctaagattaggc 2412091
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 381 bits (192), Expect = e-102 Identities = 384/447 (85%), Gaps = 2/447 (0%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| || |||||||||||||||| || Sbjct: 188961 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggccccaaa 189020 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 || | || |||| |||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 189021 ataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggtttgcttagaa 189080 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 ||||| | |||||||||||||||||||||||||||| || || | | ||||| ||| || Sbjct: 189081 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctgcgccgaaaat 189140 Query: 189 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 248 ||||||| ||||| || ||||||||||||||||||| | | |||||||||||||||| Sbjct: 189141 gaacgggactaagtaatttgccgaagctgtgggatgtttata--catcggtaggggagcg 189198 Query: 249 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 308 ||| | |||| |||||| ||||||||||| || ||| || | ||||||||||||| Sbjct: 189199 ttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaagcgagaatgt 189258 Query: 309 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 368 |||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 189259 cggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggattcctc 189318 Query: 369 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 428 || ||||||||||| ||||||||||||||||||||||| |||| |||| ||||||||| Sbjct: 189319 cggaaggttcgtccgcggagggtgagtcagggcctaaggcgaggctgaaaagcgtagtcg 189378 Query: 429 atggacaacaggtcaatattcctgtac 455 ||||| ||||||| ||||||||||||| Sbjct: 189379 atggataacaggttaatattcctgtac 189405 Score = 381 bits (192), Expect = e-102 Identities = 384/447 (85%), Gaps = 2/447 (0%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| || |||||||||||||||| || Sbjct: 150518 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggccccaaa 150577 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 || | || |||| |||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 150578 ataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggtttgcttagaa 150637 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 ||||| | |||||||||||||||||||||||||||| || || | | ||||| ||| || Sbjct: 150638 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctgcgccgaaaat 150697 Query: 189 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 248 ||||||| ||||| || ||||||||||||||||||| | | |||||||||||||||| Sbjct: 150698 gaacgggactaagtaatttgccgaagctgtgggatgtttata--catcggtaggggagcg 150755 Query: 249 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 308 ||| | |||| |||||| ||||||||||| || ||| || | ||||||||||||| Sbjct: 150756 ttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaagcgagaatgt 150815 Query: 309 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 368 |||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 150816 cggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggattcctc 150875 Query: 369 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 428 || ||||||||||| ||||||||||||||||||||||| |||| |||| ||||||||| Sbjct: 150876 cggaaggttcgtccgcggagggtgagtcagggcctaaggcgaggctgaaaagcgtagtcg 150935 Query: 429 atggacaacaggtcaatattcctgtac 455 ||||| ||||||| ||||||||||||| Sbjct: 150936 atggataacaggttaatattcctgtac 150962
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 377 bits (190), Expect = e-101 Identities = 205/210 (97%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 465 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 524 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 525 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 584 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 585 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 644 Query: 181 ctgaagatgaacggggctaagcgatctgcc 210 | |||||||||||||||||||||||||||| Sbjct: 645 ccgaagatgaacggggctaagcgatctgcc 674
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 367 bits (185), Expect = 2e-98 Identities = 379/441 (85%), Gaps = 2/441 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||| |||||||||||||| | |||||||||| |||||||| || || | |||||| Sbjct: 946 tgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggctaag 1005 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||||||| Sbjct: 1006 gcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggaggttt 1065 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| Sbjct: 1066 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcccgcg 1125 Query: 181 ctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 239 | |||||||||||| || ||||| ||||||| || |||||||| |||| |||||||| Sbjct: 1126 ccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcatcggt 1184 Query: 240 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 299 ||||||||||||||| || ||||| |||| ||| || || ||||| ||||||| Sbjct: 1185 aggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcggaag 1244 Query: 300 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 359 |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 1245 tgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaacccaa 1304 Query: 360 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 419 || |||| | | |||| |||||||||| ||||||||||||||||||| | |||||||| | Sbjct: 1305 gggttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggccgaagg 1364 Query: 420 gcgtagtcgatggacaacagg 440 ||| || |||||||||||||| Sbjct: 1365 gcgcagccgatggacaacagg 1385
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 367 bits (185), Expect = 2e-98 Identities = 379/441 (85%), Gaps = 2/441 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||| |||||||||||||| | |||||||||| |||||||| || || | |||||| Sbjct: 959 tgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggctaag 1018 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||||||| Sbjct: 1019 gcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggaggttt 1078 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| Sbjct: 1079 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcccgcg 1138 Query: 181 ctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 239 | |||||||||||| || ||||| ||||||| || |||||||| |||| |||||||| Sbjct: 1139 ccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcatcggt 1197 Query: 240 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 299 ||||||||||||||| || ||||| |||| ||| || || ||||| ||||||| Sbjct: 1198 aggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcggaag 1257 Query: 300 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 359 |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 1258 tgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaacccaa 1317 Query: 360 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 419 || |||| | | |||| |||||||||| ||||||||||||||||||| | |||||||| | Sbjct: 1318 gggttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggccgaagg 1377 Query: 420 gcgtagtcgatggacaacagg 440 ||| || |||||||||||||| Sbjct: 1378 gcgcagccgatggacaacagg 1398
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 367 bits (185), Expect = 2e-98 Identities = 379/441 (85%), Gaps = 2/441 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||| |||||||||||||| | |||||||||| |||||||| || || | |||||| Sbjct: 5533 tgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggctaag 5592 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||||||| Sbjct: 5593 gcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggaggttt 5652 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| Sbjct: 5653 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcccgcg 5712 Query: 181 ctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 239 | |||||||||||| || ||||| ||||||| || |||||||| |||| |||||||| Sbjct: 5713 ccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcatcggt 5771 Query: 240 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 299 ||||||||||||||| || ||||| |||| ||| || || ||||| ||||||| Sbjct: 5772 aggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcggaag 5831 Query: 300 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 359 |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 5832 tgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaacccaa 5891 Query: 360 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 419 || |||| | | |||| |||||||||| ||||||||||||||||||| | |||||||| | Sbjct: 5892 gggttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggccgaagg 5951 Query: 420 gcgtagtcgatggacaacagg 440 ||| || |||||||||||||| Sbjct: 5952 gcgcagccgatggacaacagg 5972
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 2 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 61 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 953 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1012 Query: 62 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 121 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1013 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1072 Query: 122 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 181 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1073 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1132 Query: 182 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 241 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1133 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1187 Query: 242 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 301 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1188 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1247 Query: 302 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 361 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1248 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1307 Query: 362 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 421 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1308 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1367 Query: 422 gtagtcgatggacaacaggtcaatattcctgtactacccc 461 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1368 ttagctgatggacaatagattaatattcttgtactacccc 1407
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 2 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 61 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 62 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 121 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 122 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 181 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 182 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 241 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 242 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 301 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 302 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 361 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 362 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 421 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 422 gtagtcgatggacaacaggtcaatattcctgtactacccc 461 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 2 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 61 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 62 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 121 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 122 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 181 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 182 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 241 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 242 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 301 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 302 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 361 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 362 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 421 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 422 gtagtcgatggacaacaggtcaatattcctgtactacccc 461 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 2 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 61 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 62 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 121 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 122 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 181 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 182 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 241 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 242 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 301 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 302 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 361 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 362 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 421 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 422 gtagtcgatggacaacaggtcaatattcctgtactacccc 461 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 2 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 61 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 62 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 121 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 122 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 181 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 182 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 241 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 242 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 301 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 302 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 361 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 362 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 421 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 422 gtagtcgatggacaacaggtcaatattcctgtactacccc 461 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 2 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 61 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 953 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1012 Query: 62 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 121 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1013 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1072 Query: 122 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 181 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1073 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1132 Query: 182 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 241 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1133 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1187 Query: 242 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 301 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1188 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1247 Query: 302 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 361 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1248 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1307 Query: 362 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 421 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1308 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1367 Query: 422 gtagtcgatggacaacaggtcaatattcctgtactacccc 461 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1368 ttagctgatggacaatagattaatattcttgtactacccc 1407
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 2 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 61 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 62 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 121 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 122 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 181 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 182 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 241 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 242 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 301 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 302 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 361 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 362 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 421 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 422 gtagtcgatggacaacaggtcaatattcctgtactacccc 461 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 2 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 61 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 62 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 121 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 122 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 181 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 182 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 241 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 242 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 301 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 302 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 361 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 362 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 421 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 422 gtagtcgatggacaacaggtcaatattcctgtactacccc 461 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 2 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 61 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 953 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1012 Query: 62 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 121 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1013 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1072 Query: 122 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 181 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1073 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1132 Query: 182 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 241 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1133 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1187 Query: 242 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 301 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1188 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1247 Query: 302 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 361 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1248 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1307 Query: 362 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 421 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1308 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1367 Query: 422 gtagtcgatggacaacaggtcaatattcctgtactacccc 461 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1368 ttagctgatggacaatagattaatattcttgtactacccc 1407
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 2 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 61 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 62 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 121 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 122 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 181 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 182 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 241 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 242 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 301 |||||||||| |||||| | ||||||| | || || | ||| || ||||| || | | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaggtg 1248 Query: 302 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 361 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 362 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 421 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 422 gtagtcgatggacaacaggtcaatattcctgtactacccc 461 ||| ||||||||| |||| ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaataggttaatattcttgtactacccc 1408
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 2 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 61 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 62 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 121 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 122 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 181 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 182 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 241 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 242 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 301 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 302 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 361 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 362 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 421 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 422 gtagtcgatggacaacaggtcaatattcctgtactacccc 461 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 2 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 61 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 62 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 121 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 122 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 181 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 182 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 241 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 242 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 301 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 302 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 361 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 362 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 421 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 422 gtagtcgatggacaacaggtcaatattcctgtactacccc 461 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 2 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 61 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 62 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 121 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 122 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 181 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaaggagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 182 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 241 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 242 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 301 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 302 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 361 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 362 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 421 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 422 gtagtcgatggacaacaggtcaatattcctgtactacccc 461 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 357 bits (180), Expect = 2e-95 Identities = 390/460 (84%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 2 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 61 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 62 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 121 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 122 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 181 |||||||| |||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaggccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 182 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 241 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 242 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 301 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 302 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 361 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 362 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 421 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 422 gtagtcgatggacaacaggtcaatattcctgtactacccc 461 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 357 bits (180), Expect = 2e-95 Identities = 390/460 (84%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 2 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 61 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 62 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 121 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | ||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagcttg 1073 Query: 122 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 181 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 182 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 241 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 242 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 301 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 302 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 361 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 362 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 421 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 422 gtagtcgatggacaacaggtcaatattcctgtactacccc 461 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 357 bits (180), Expect = 2e-95 Identities = 390/460 (84%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 2 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 61 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 62 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 121 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 122 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 181 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 182 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 241 ||| ||||||||| || || ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataggcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 242 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 301 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcccgagaagtggtggatgaagcagaagtg 1248 Query: 302 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 361 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 362 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 421 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 422 gtagtcgatggacaacaggtcaatattcctgtactacccc 461 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 17 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 76 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 77 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 136 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 137 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 168126 Query: 197 ctaagcgatctgccgaagctgtgggatgtcaaaat 231 |||||||||||||| |||||||||||||||||||| Sbjct: 168127 ctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 17 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 76 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 77 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 136 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 137 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 2530 Query: 197 ctaagcgatctgccgaagctgtgggatgtcaaaat 231 |||||||||||||| |||||||||||||||||||| Sbjct: 2531 ctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 345 bits (174), Expect = 9e-92 Identities = 174/174 (100%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 835 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 836 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 895 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 896 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 949
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 343 bits (173), Expect = 3e-91 Identities = 389/457 (85%), Gaps = 3/457 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccagctaa 59 ||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| ||||| Sbjct: 957 tgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccggctaa 1016 Query: 60 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 119 ||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| ||||| Sbjct: 1017 ggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaaggtt 1076 Query: 120 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 179 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || || Sbjct: 1077 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctctggc 1136 Query: 180 gctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 238 || ||| ||||| ||| || ||| |||||||||||| |||| |||| ||| | ||| || Sbjct: 1137 gccgaaaatgaaagggactcaaggaatctgccgaagccgtggcatgt-aaattacatggg 1195 Query: 239 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 298 ||||||||||||| | |||| ||||| |||||||| | || ||| || | ||| Sbjct: 1196 taggggagcgttctgttttagttagaagcgtaagcgaaagcatgtgtggacaaaacagaa 1255 Query: 299 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 358 | |||||||||||||||||||||| |||| | ||||||||||| |||||||||||||| | Sbjct: 1256 gtgagaatgtcggcttgagtaacgcaaacgtgggtgagaatcccatgccccgaaaaccta 1315 Query: 359 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 418 ||| ||||| || |||| ||||||||| |||||||||||||||||||||| | ||||||| Sbjct: 1316 agggttccttcggaaggctcgtccacgaagggtgagtcagggcctaagatgatgccgaaa 1375 Query: 419 ggcgtagtcgatggacaacaggtcaatattcctgtac 455 |||||||||||||||||||||||||| |||||||||| Sbjct: 1376 ggcgtagtcgatggacaacaggtcaaaattcctgtac 1412
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 333 bits (168), Expect = 3e-88 Identities = 192/200 (96%) Strand = Plus / Minus Query: 24 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 83 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 84 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 143 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 144 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 203 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 115295 Query: 204 atctgccgaagctgtgggat 223 |||||||||||||||||||| Sbjct: 115294 atctgccgaagctgtgggat 115275
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 329 bits (166), Expect = 5e-87 Identities = 377/445 (84%), Gaps = 3/445 (0%) Strand = Plus / Minus Query: 12 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 71 ||||||||||||| ||| ||||||||||||||| ||| ||||| |||||||||||||| Sbjct: 18079 gggataagcttcaatgtcaagagggaaacagcccagattaccagttaaggcccctaaata 18020 Query: 72 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 131 | || |||||||||||||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 18019 attactaagtgataaaggaggtgggagtgcatagacaatcaggaggtttgcctagaagca 17960 Query: 132 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 191 || | |||||||||||||||||||||||||||| ||||| || | ||||| ||| ||||| Sbjct: 17959 gcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctgcgccgaaaatgaa 17900 Query: 192 cggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 251 ||| ||||| || |||||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 17899 tgggactaagtaatttgccgaagctgtaagatgttaaaa--catcggtaggggagcgttc 17842 Query: 252 cgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcgg 311 | |||| ||||| ||| ||||||| || ||| | | |||| |||||||| | Sbjct: 17841 tacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaagtgagaatgttag 17782 Query: 312 cttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgc 371 |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 17781 cttgagtagcgaaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgg 17722 Query: 372 aaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatg 431 |||| |||||| |||||||||||||||| |||||| | ||| | || ||||| |||||| Sbjct: 17721 aaggctcgtccgcggagggtgagtcaggtcctaaggtgagg-ctaatagcgtaatcgatg 17663 Query: 432 gacaacaggtcaatattcctgtact 456 || ||||||| |||||||||||||| Sbjct: 17662 gataacaggttaatattcctgtact 17638 Score = 329 bits (166), Expect = 5e-87 Identities = 377/445 (84%), Gaps = 3/445 (0%) Strand = Plus / Plus Query: 12 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 71 ||||||||||||| ||| ||||||||||||||| ||| ||||| |||||||||||||| Sbjct: 2787 gggataagcttcaatgtcaagagggaaacagcccagattaccagttaaggcccctaaata 2846 Query: 72 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 131 | || |||||||||||||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 2847 attactaagtgataaaggaggtgggagtgcatagacaatcaggaggtttgcctagaagca 2906 Query: 132 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 191 || | |||||||||||||||||||||||||||| ||||| || | ||||| ||| ||||| Sbjct: 2907 gcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctgcgccgaaaatgaa 2966 Query: 192 cggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 251 ||| ||||| || |||||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 2967 tgggactaagtaatttgccgaagctgtaagatgttaaaa--catcggtaggggagcgttc 3024 Query: 252 cgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcgg 311 | |||| ||||| ||| ||||||| || ||| | | |||| |||||||| | Sbjct: 3025 tacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaagtgagaatgttag 3084 Query: 312 cttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgc 371 |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 3085 cttgagtagcgaaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgg 3144 Query: 372 aaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatg 431 |||| |||||| |||||||||||||||| |||||| | ||| | || ||||| |||||| Sbjct: 3145 aaggctcgtccgcggagggtgagtcaggtcctaaggtgagg-ctaatagcgtaatcgatg 3203 Query: 432 gacaacaggtcaatattcctgtact 456 || ||||||| |||||||||||||| Sbjct: 3204 gataacaggttaatattcctgtact 3228
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 315 bits (159), Expect = 8e-83 Identities = 376/446 (84%), Gaps = 3/446 (0%) Strand = Plus / Plus Query: 12 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 71 |||||||||||||| ||| | ||||||||||||| || |||||| |||||||||||||| Sbjct: 2654 gggataagcttcattgtcaaaagggaaacagcccagaccaccagttaaggcccctaaata 2713 Query: 72 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 131 || |||| |||||||||||| |||| ||| ||||||||||||| |||||||| Sbjct: 2714 gttactaagtggcaaaggaggtgggaatgcattaacaaccaggaggtttgcttagaagca 2773 Query: 132 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 191 || | |||||||||||||||||||||||||||| || || | | ||||| ||| ||||| Sbjct: 2774 gcaatcctttaaagagtgcgtaatagctcactggtctagtgatcctgcgccgaaaatgaa 2833 Query: 192 cggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 251 |||| ||||| | ||||||| ||||||||||| | ||||||||||||||||||||| Sbjct: 2834 cgggactaagtaacttgccgaatctgtgggatgttta--tgcatcggtaggggagcgttc 2891 Query: 252 cgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcgg 311 || ||||| |||||| |||||| || || ||| |||| |||| ||||||||||| Sbjct: 2892 tgc-ttagattgaagcattaacgaaagtggatgtggacaaagcagaagtgagaatgtcgg 2950 Query: 312 cttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgc 371 |||||||| |||||||||||||||||||||||||||||| ||||| |||| |||||| | Sbjct: 2951 cttgagtagcgaaaacattggtgagaatccaatgccccggaaacctaaggattcctctgg 3010 Query: 372 aaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatg 431 |||| ||||||||||||||| ||||||| ||||| || ||||||||||||||| | |||| Sbjct: 3011 aaggctcgtccacggagggttagtcaggacctaaaatgaggccgaaaggcgtaattgatg 3070 Query: 432 gacaacaggtcaatattcctgtacta 457 |||||||||| ||||||||||||||| Sbjct: 3071 gacaacaggttaatattcctgtacta 3096
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 307 bits (155), Expect = 2e-80 Identities = 197/211 (93%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||| ||| ||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 1369 tgggggataagctccattgtcaagagggaaacagcccagatcaccagctaaggcccctaa 1428 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 |||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 1429 atgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggaggtttgcctagaa 1488 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| || Sbjct: 1489 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaaaat 1548 Query: 189 gaacggggctaagcgatctgccgaagctgtg 219 ||||||| ||||||| ||||||||||||||| Sbjct: 1549 gaacgggactaagcggtctgccgaagctgtg 1579 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 234 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 293 ||||||||||||||||||||| ||||| |||||| ||| |||| || || ||||| | Sbjct: 1601 atcggtaggggagcgttccgcgttagatcgaagcattagcgtaagcaggtgtggacgagg 1660 Query: 294 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 353 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1661 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccctgaaa 1720 Query: 354 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 413 ||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||||| || Sbjct: 1721 acctaaggattcctacgcaaggttcgtccacgtggggtgagtcaggacctaagatcaagc 1780 Query: 414 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 457 |||| |||| |||||||||| ||||||| || |||||||||||| Sbjct: 1781 cgaatggcgcagtcgatggataacaggt-aacattcctgtacta 1823
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 307 bits (155), Expect = 2e-80 Identities = 232/258 (89%), Gaps = 6/258 (2%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 977 tgagaccatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaag 1036 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||| ||| ||||||||||| |||||||| ||||| ||||||||||| Sbjct: 1037 gcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacaaccaggaggttt 1096 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 1097 gcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgctcttgcg 1156 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||| ||||| ||| ||||||| | |||||||||||||||||| | ||||||| Sbjct: 1157 ccgaatatgaatgggaataagcgacccgccgaagctgtgggatgtaa------atcggta 1210 Query: 241 ggggagcgttccgcctta 258 ||||||||||| |||||| Sbjct: 1211 ggggagcgttctgcctta 1228 Score = 206 bits (104), Expect = 5e-50 Identities = 155/172 (90%) Strand = Plus / Plus Query: 290 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 349 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1270 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1329 Query: 350 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 409 ||||||| |||| ||||| ||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 1330 gaaaacctaagggttccttcgcaaggttcgtccacgtagggtgagtcaggtcctaagatc 1389 Query: 410 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 461 | | |||||| |||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 1390 atactgaaaggtttagttgatggacaataggttaatattcctatactacccc 1441
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 287 bits (145), Expect = 2e-74 Identities = 384/461 (83%), Gaps = 7/461 (1%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||| | ||||||||||||||||||||||||||| |||| || |||||| ||||||| Sbjct: 972 tgagaccacgggggataagcttcatcgtcgagaggggaacattccagatcactagctaag 1031 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||| ||| ||||||||||| ||||||| ||||| ||||||||||| Sbjct: 1032 ccccctaaatgaccgctaagttataaaggaggt-agggtgcatagacatccaggaggttt 1090 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||| ||||||||||||||| |||| |||||||| ||||| | || ||||| Sbjct: 1091 gcctagaagaagccaccctttaaagcgtgcataatagctaactgacaaacagctcttgca 1150 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 240 | ||| ||||||| | |||| |||| | |||||||||||||||| ||||||||| Sbjct: 1151 ccgaaaatgaacgagaataagagatccgtcgaagctgtgggatgt-----agcatcggta 1205 Query: 241 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 300 ||||||||||| ||||| ||||||||| | || ||| | || || ||||| |||| Sbjct: 1206 ggggagcgttcttccttatagggaagcacctgcacgagcagttgtggatgaagcagaagt 1265 Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 ||||||||||||||||||||| ||||||||| ||||||||||| |||| |||||| ||| Sbjct: 1266 gagaatgtcggcttgagtaacacaaacattggcgagaatccaattccccaaaaacctaag 1325 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | ||||| | |||||||| |||||| ||||||||||||| |||||||||| | |||||| Sbjct: 1326 ggttccttcacaaggttcatccacgtagggtgagtcaggtcctaagatcatactgaaagg 1385 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtactacccc 461 || | |||||| || |||| |||| |||||||||||||| Sbjct: 1386 ttta-ttgatggataataggttaataatcctgtactacccc 1425
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 287 bits (145), Expect = 2e-74 Identities = 157/161 (97%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 19152870 tgagacgatgggggataagcttcatcgtcgagagggaaacaacccggatcaccagctaag 19152929 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 19152930 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagatagccaggaggttt 19152989 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctca 161 |||||||||||||||||||||||||||||||| ||| |||| Sbjct: 19152990 gcctagaagcagccaccctttaaagagtgcgttatatctca 19153030
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 287 bits (145), Expect = 2e-74 Identities = 157/161 (97%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 76265 tgagacgatgggggataagcttcatcgtcgagagggaaacaacccggatcaccagctaag 76324 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 76325 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagatagccaggaggttt 76384 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctca 161 |||||||||||||||||||||||||||||||| ||| |||| Sbjct: 76385 gcctagaagcagccaccctttaaagagtgcgttatatctca 76425
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 283 bits (143), Expect = 3e-73 Identities = 203/223 (91%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 970 tgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaag 1029 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||||||||| |||| ||||||||||| | ||| | ||| ||||||||||| Sbjct: 1030 gcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggaggttt 1089 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 || ||||||||||||||||||||||||||||||||||||||||| | ||||| |||||| Sbjct: 1090 gcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttcttgcg 1149 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggat 223 | ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1150 ccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 194 bits (98), Expect = 2e-46 Identities = 149/166 (89%) Strand = Plus / Plus Query: 291 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 350 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1358 Query: 351 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 410 |||||| |||| ||||| | ||||||||||| | ||||| ||||||| |||||| || Sbjct: 1359 aaaacctaagggttcctttactaggttcgtccatgaagggttagtcaggacctaaggcca 1418 Query: 411 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 | |||||||| |||||||||||| ||||||| |||||||||||||| Sbjct: 1419 gaccgaaaggtgtagtcgatggagaacaggttaatattcctgtact 1464 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 atcggtaggggagcgttccgc 254 ||||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccgc 1262
>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full insert sequence Length = 1809 Score = 274 bits (138), Expect = 3e-70 Identities = 138/138 (100%) Strand = Plus / Plus Query: 369 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 60 Query: 429 atggacaacaggtcaatattcctgtactaccccttgttggtacggagggacggaggaggc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atggacaacaggtcaatattcctgtactaccccttgttggtacggagggacggaggaggc 120 Query: 489 taggttagccgaaagatg 506 |||||||||||||||||| Sbjct: 121 taggttagccgaaagatg 138
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 264 bits (133), Expect = 3e-67 Identities = 196/217 (90%) Strand = Plus / Plus Query: 236 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 295 ||||||||||||||||||| ||| | |||||| | |||||||| || || ||||||||| Sbjct: 1192 cggtaggggagcgttccgctctagggtgaagcatcagcgaaagcaggtgtggacgaagcg 1251 Query: 296 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 355 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1252 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaacc 1311 Query: 356 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 415 | |||| ||||||||||||| ||||||||||||||||||||||| |||||||| |||||| Sbjct: 1312 ctaagggttcctccgcaaggctcgtccacggagggtgagtcaggtcctaagataaggccg 1371 Query: 416 aaaggcgtagtcgatggacaacaggtcaatattcctg 452 ||||||||||||||||| | ||||| |||||||||| Sbjct: 1372 aaaggcgtagtcgatggctatcaggttaatattcctg 1408 Score = 252 bits (127), Expect = 1e-63 Identities = 196/219 (89%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 949 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccatctaag 1008 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||| ||||||||||| |||| ||||||||| | ||||||||||| ||||||||||| Sbjct: 1009 gccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccaggaggttt 1068 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| ||||||||||||||||||||||| || ||||| || ||| Sbjct: 1069 gcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctctcgcg 1128 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtg 219 | ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1129 ccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 473 gagggacggaggaggctaggttagccg 499 |||||||| |||||||||||||||||| Sbjct: 1429 gagggacgaaggaggctaggttagccg 1455
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 262 bits (132), Expect = 1e-66 Identities = 198/220 (90%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct: 574 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaag 633 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 | ||| ||||| ||||||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 634 gtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccaggaggttt 693 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | |||| Sbjct: 694 gcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcctgcg 753 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgg 220 | ||| |||||||||||||||||| ||||||||||||||| Sbjct: 754 ccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 143 bits (72), Expect = 6e-31 Identities = 138/160 (86%) Strand = Plus / Plus Query: 296 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 355 |||| ||||||||||||||||||| |||||| ||| ||||||| |||||||| | Sbjct: 873 gaagtgagaatgtcggcttgagtagcgaaaattagggtaagaatccctaaccccgaaacc 932 Query: 356 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 415 |||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 933 ccaagggttcctccgcaaggctcgtccacggagggttagtcagggcctaaggcgaggccg 992 Query: 416 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 455 |||||||||||||||||||||| ||| || ||||| |||| Sbjct: 993 aaaggcgtagtcgatggacaacgggttaacattcccgtac 1032
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 260 bits (131), Expect = 4e-66 Identities = 200/223 (89%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 1107 tgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagctaag 1166 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||| |||| ||||| |||| ||||||||||| | |||| | ||| ||||||||||| Sbjct: 1167 gcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggaggttt 1226 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 || |||||||||| |||||||||||||||||||||||||||||| | ||||| |||||| Sbjct: 1227 gcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttcttgcg 1286 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggat 223 | ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1287 ccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329 Score = 252 bits (127), Expect = 1e-63 Identities = 199/223 (89%) Strand = Plus / Plus Query: 234 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 293 ||||||||||||||||||||| ||| | |||||| | |||||| || || ||||||| Sbjct: 1410 atcggtaggggagcgttccgctctagggtgaagcatcaacgaaagtaggtgtggacgaag 1469 Query: 294 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 353 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1529 Query: 354 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 413 ||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| |||| Sbjct: 1530 acctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaaggcgaggc 1589 Query: 414 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 ||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1590 cgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1632
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 260 bits (131), Expect = 4e-66 Identities = 218/246 (88%), Gaps = 2/246 (0%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||| | Sbjct: 964 tgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaaggccccaga 1023 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 ||| |||||||||||||||||| ||| | |||| ||||| ||||||||||||||||||| Sbjct: 1024 atggccgctcagtgataaaggatgtgagagtgcccagacaaccaggaggtttgcctagaa 1083 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| ||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1084 gcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1143 Query: 189 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 248 ||||||| ||||||| |||||||||||||| |||| || |||||||||||||||| Sbjct: 1144 gaacgggactaagcggcctgccgaagctgtgagatggtgaa--tcatcggtaggggagcg 1201 Query: 249 ttccgc 254 |||||| Sbjct: 1202 ttccgc 1207 Score = 176 bits (89), Expect = 5e-41 Identities = 177/205 (86%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1240 gacgaggcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1299 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 ||||||||| |||| ||||| | ||| ||||||| ||||||||||||||| |||||| Sbjct: 1300 tccgaaaacctaagggttccttcagtaggctcgtccatggagggtgagtcaggacctaag 1359 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttg-t 465 ||||||||||||||| |||||| |||||||| || ||||||||||| | ||| | Sbjct: 1360 gagaggccgaaaggcgtatccgatggccaacaggttaacattcctgtactgcaaattgtt 1419 Query: 466 tggtacggagggacggaggaggcta 490 |||||| ||||||||||| |||||| Sbjct: 1420 tggtaccgagggacggagaaggcta 1444
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 260 bits (131), Expect = 4e-66 Identities = 197/219 (89%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 964 tgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaag 1023 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||| ||||| |||||||||||||||| | ||| | ||| ||||||||||| Sbjct: 1024 gcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggaggttt 1083 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 || ||||||||||||||||| ||||||||||||||||||||||| | ||||| |||||| Sbjct: 1084 gcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttcttgcg 1143 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtg 219 | ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1144 ccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182 Score = 242 bits (122), Expect = 9e-61 Identities = 158/170 (92%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1268 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1327 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||||||| |||| ||||||| | ||||||||||| |||||||||||||||||||||| Sbjct: 1328 cccgaaaacctaagggttcctccactaggttcgtccatggagggtgagtcagggcctaag 1387 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 |||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1388 gcgaggccgaaaggcgtagtcgatggaaaacaggttaatattcctgtact 1437 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 atcggtaggggagcgttccgc 254 ||||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccgc 1235
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 250 bits (126), Expect = 4e-63 Identities = 159/170 (93%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1341 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 1342 cccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtgagtcaggacctaag 1401 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1402 gcaaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1451 Score = 236 bits (119), Expect = 6e-59 Identities = 188/211 (89%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| ||||||||| |||||||||||| Sbjct: 984 tgggggataagcttcattgtcaagagggaaacagcccagatcaccagttaaggcccctaa 1043 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 ||||| ||| |||| |||||||||| | |||| ||||| ||||||||||||||||||| Sbjct: 1044 atgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggaggtttgcctagaa 1103 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| ||||||||||||||||||||||| || ||||| ||||||| || || Sbjct: 1104 gcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctcttgcgcctaaaat 1163 Query: 189 gaacggggctaagcgatctgccgaagctgtg 219 ||||||| |||||| ||||||||||||||| Sbjct: 1164 gaacgggactaagcagtctgccgaagctgtg 1194
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 250 bits (126), Expect = 4e-63 Identities = 159/170 (93%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3051 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 3110 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 3111 cccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtgagtcaggacctaag 3170 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 3171 gcaaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 3220 Score = 236 bits (119), Expect = 6e-59 Identities = 188/211 (89%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| ||||||||| |||||||||||| Sbjct: 2753 tgggggataagcttcattgtcaagagggaaacagcccagatcaccagttaaggcccctaa 2812 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 ||||| ||| |||| |||||||||| | |||| ||||| ||||||||||||||||||| Sbjct: 2813 atgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggaggtttgcctagaa 2872 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| ||||||||||||||||||||||| || ||||| ||||||| || || Sbjct: 2873 gcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctcttgcgcctaaaat 2932 Query: 189 gaacggggctaagcgatctgccgaagctgtg 219 ||||||| |||||| ||||||||||||||| Sbjct: 2933 gaacgggactaagcagtctgccgaagctgtg 2963
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 242 bits (122), Expect = 9e-61 Identities = 194/218 (88%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||||||| Sbjct: 170527 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagctaag 170468 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||||||| Sbjct: 170467 gccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggaggttt 170408 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || ||| Sbjct: 170407 gcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctctcgcg 170348 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgt 218 | ||| ||||||||| ||||||| ||||||||||||| Sbjct: 170347 ccgaaaatgaacgggactaagcggcctgccgaagctgt 170310 Score = 242 bits (122), Expect = 9e-61 Identities = 194/218 (88%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||||||| Sbjct: 122399 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagctaag 122458 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||||||| Sbjct: 122459 gccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggaggttt 122518 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || ||| Sbjct: 122519 gcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctctcgcg 122578 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgt 218 | ||| ||||||||| ||||||| ||||||||||||| Sbjct: 122579 ccgaaaatgaacgggactaagcggcctgccgaagctgt 122616 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Minus Query: 237 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 296 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 170294 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 170235 Query: 297 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 356 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 170234 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 170175 Query: 357 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 416 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 170174 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 170115 Query: 417 aaggcgtagtcgatggacaacaggtcaatattcctgtact 456 ||||||||||||||| ||| ||| |||||||||||||| Sbjct: 170114 caggcgtagtcgatggcaaactggttaatattcctgtact 170075 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Plus Query: 237 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 296 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 122632 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 122691 Query: 297 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 356 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 122692 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 122751 Query: 357 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 416 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 122752 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 122811 Query: 417 aaggcgtagtcgatggacaacaggtcaatattcctgtact 456 ||||||||||||||| ||| ||| |||||||||||||| Sbjct: 122812 caggcgtagtcgatggcaaactggttaatattcctgtact 122851
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 242 bits (122), Expect = 9e-61 Identities = 195/218 (89%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 3 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 62 ||||| ||||||||||||| ||||||||||||||||||||||| || |||||||||||| Sbjct: 574 agacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccagctaaggt 633 Query: 63 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 122 ||| ||||||| ||| |||||||||||||||| | ||||| |||| ||||||||||||| Sbjct: 634 ccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccaggaggtttgc 693 Query: 123 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 182 |||||||||||||||||| ||||||||||||||||||||||| || ||||| ||| ||| Sbjct: 694 ctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctctt-cgcc 752 Query: 183 gaagatgaacggggctaagcgatctgccgaagctgtgg 220 ||| |||||||||||||||| ||| |||||||||||| Sbjct: 753 gaaaatgaacggggctaagcagtctaccgaagctgtgg 790 Score = 69.9 bits (35), Expect = 8e-09 Identities = 131/163 (80%) Strand = Plus / Plus Query: 293 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 352 ||||||| ||||||||||||||||||| || ||| | ||||||||||| | ||||||| Sbjct: 863 gcggaagtgagaatgtcggcttgagtagcgcaaatgtaggtgagaatcctacaccccgaa 922 Query: 353 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 412 | || |||| |||| || ||| |||||| | |||||||||||| |||||| ||| Sbjct: 923 accctaagggttccagagccaggctcgtccgctctgggtgagtcaggtcctaaggcgagg 982 Query: 413 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 455 || || ||||||||||||||| ||| ||| || ||||| |||| Sbjct: 983 ccaaacggcgtagtcgatggataacgggttaacattcccgtac 1025
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 242 bits (122), Expect = 9e-61 Identities = 216/246 (87%), Gaps = 1/246 (0%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||| ||| ||||||||||||||||||| || || | |||||||||||||| Sbjct: 967 tgggggataagctccattgtcgagagggaaacagcccagaccatcggctaaggcccctaa 1026 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 |||| || |||||||||||||||| | |||| ||||| ||||||||||||||||||| Sbjct: 1027 atgattactaagtgataaaggaggtgagagtgcccagacaaccaggaggtttgcctagaa 1086 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| ||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1087 gcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1146 Query: 189 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg-catcggtaggggagc 247 ||||||| ||||| |||||||||||||||||||| ||| || |||||||||||||| Sbjct: 1147 gaacgggactaagtaatctgccgaagctgtgggataacaatttgttatcggtaggggagc 1206 Query: 248 gttccg 253 |||||| Sbjct: 1207 gttccg 1212 Score = 139 bits (70), Expect = 1e-29 Identities = 143/166 (86%), Gaps = 1/166 (0%) Strand = Plus / Plus Query: 294 cggaagcgagaatgtcggcttgagtaacgaaaacattggtga-gaatccaatgccccgaa 352 |||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 1252 cggaagtgagaatgtcggcttgagtaacgaaaacaggggtgatgaatcccctgccccgaa 1311 Query: 353 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 412 | ||||||| ||||||| | ||| ||||||| ||||||| ||||||| ||||||| ||| Sbjct: 1312 agcccaagggttcctccactaggctcgtccagggagggtcagtcaggacctaagacgagg 1371 Query: 413 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactac 458 || || |||| |||||||||| |||||| || ||||||||||||| Sbjct: 1372 ccaaacggcgcagtcgatggaaaacaggcgaacattcctgtactac 1417
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 242 bits (122), Expect = 9e-61 Identities = 194/218 (88%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||||||| Sbjct: 990 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagctaag 1049 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||||||| Sbjct: 1050 gccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggaggttt 1109 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || ||| Sbjct: 1110 gcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctctcgcg 1169 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgt 218 | ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1170 ccgaaaatgaacgggactaagcggcctgccgaagctgt 1207 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Plus Query: 237 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 296 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 1223 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 1282 Query: 297 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 356 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 1283 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 1342 Query: 357 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 416 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 1343 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 1402 Query: 417 aaggcgtagtcgatggacaacaggtcaatattcctgtact 456 ||||||||||||||| ||| ||| |||||||||||||| Sbjct: 1403 caggcgtagtcgatggcaaactggttaatattcctgtact 1442
>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3434 Score = 240 bits (121), Expect = 4e-60 Identities = 214/245 (87%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| || |||||||||||| ||| || Sbjct: 2662 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggtccccaa 2721 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 || | | || |||||||||||||||||| ||||| ||||| | ||||||||||||||||| Sbjct: 2722 atcatcactaagtgataaaggaggtgggagtgcacagacaactaggaggtttgcctagaa 2781 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| |||||||||||||||||||||| || ||||| | ||||| ||| || Sbjct: 2782 gcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctcctgcgccgaaaat 2841 Query: 189 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 248 ||||||||||||| ||| | ||||||||||||||| |||| ||||||||||||||| Sbjct: 2842 gaacggggctaagtgatgtaccgaagctgtgggattaagaaattaatcggtaggggagcg 2901 Query: 249 ttccg 253 ||||| Sbjct: 2902 ttccg 2906 Score = 149 bits (75), Expect = 1e-32 Identities = 120/135 (88%) Strand = Plus / Plus Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 ||||||||||||||||||| || |||||||||||||||||||||||||||||| || ||| Sbjct: 2955 gagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaccctaag 3014 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | |||||||| |||||||||| |||||||| |||| || |||||| ||| ||||||| Sbjct: 3015 ggttcctccggcaggttcgtccgcggagggttagtcgggacctaaggcgaggtcgaaagg 3074 Query: 421 cgtagtcgatggaca 435 ||||||||||||||| Sbjct: 3075 cgtagtcgatggaca 3089
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 240 bits (121), Expect = 4e-60 Identities = 196/221 (88%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 1094 tgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagctaag 1153 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| |||||| Sbjct: 1154 gccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaaggttt 1213 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 || ||||||||||||||||||||||||||||||||||||||||| | ||||| |||||| Sbjct: 1214 gcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttcttgcg 1273 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtggg 221 | ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1274 ccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314 Score = 210 bits (106), Expect = 3e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 291 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 350 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1453 Query: 351 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 410 |||||| |||| ||||||| | ||| ||||||| || |||| |||| || |||||| || Sbjct: 1454 aaaacctaaggcttcctccactaggctcgtccatggggggttagtcgggacctaaggcca 1513 Query: 411 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1514 ggccgaaaggcgtagtcgatggaaaacaggttaatattcctgtact 1559
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 236 bits (119), Expect = 6e-59 Identities = 197/223 (88%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct: 571 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaag 630 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 | ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||||||||| Sbjct: 631 gtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggttt 690 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||| || |||| |||||| Sbjct: 691 gcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgcg 750 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggat 223 | ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 751 ccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 793 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 294 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 353 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Query: 354 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 413 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 927 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 986 Query: 414 cgaaaggcgtagtcgatggaca 435 |||||||||||||||||||||| Sbjct: 987 cgaaaggcgtagtcgatggaca 1008
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 236 bits (119), Expect = 6e-59 Identities = 197/223 (88%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct: 5434413 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaag 5434354 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 | ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||||||||| Sbjct: 5434353 gtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggttt 5434294 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||| || |||| |||||| Sbjct: 5434293 gcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgcg 5434234 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggat 223 | ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5434233 ccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5434191 Score = 236 bits (119), Expect = 6e-59 Identities = 197/223 (88%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct: 3897025 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaag 3897084 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 | ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||||||||| Sbjct: 3897085 gtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggttt 3897144 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||| || |||| |||||| Sbjct: 3897145 gcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgcg 3897204 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggat 223 | ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 3897205 ccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 3897247 Score = 236 bits (119), Expect = 6e-59 Identities = 197/223 (88%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct: 2807134 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaag 2807075 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 | ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||||||||| Sbjct: 2807074 gtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggttt 2807015 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||| || |||| |||||| Sbjct: 2807014 gcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgcg 2806955 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggat 223 | ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2806954 ccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2806912 Score = 236 bits (119), Expect = 6e-59 Identities = 197/223 (88%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct: 1005868 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaag 1005927 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 | ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||||||||| Sbjct: 1005928 gtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggttt 1005987 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||| || |||| |||||| Sbjct: 1005988 gcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgcg 1006047 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggat 223 | ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 1006048 ccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 1006090 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 294 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 353 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5434116 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5434057 Query: 354 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 413 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 5434056 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 5433997 Query: 414 cgaaaggcgtagtcgatggaca 435 |||||||||||||||||||||| Sbjct: 5433996 cgaaaggcgtagtcgatggaca 5433975 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 294 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 353 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 3897322 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 3897381 Query: 354 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 413 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 3897382 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 3897441 Query: 414 cgaaaggcgtagtcgatggaca 435 |||||||||||||||||||||| Sbjct: 3897442 cgaaaggcgtagtcgatggaca 3897463 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 294 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 353 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2806837 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2806778 Query: 354 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 413 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 2806777 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 2806718 Query: 414 cgaaaggcgtagtcgatggaca 435 |||||||||||||||||||||| Sbjct: 2806717 cgaaaggcgtagtcgatggaca 2806696 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 294 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 353 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 1006165 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 1006224 Query: 354 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 413 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 1006225 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 1006284 Query: 414 cgaaaggcgtagtcgatggaca 435 |||||||||||||||||||||| Sbjct: 1006285 cgaaaggcgtagtcgatggaca 1006306
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 236 bits (119), Expect = 6e-59 Identities = 158/171 (92%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1432 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1491 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 1492 cccgaaaacctaagggttcctccactaggttcgtccatggagggtgagtcaggacctaag 1551 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 457 ||||||||||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1552 gccaggccgaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1602 Score = 216 bits (109), Expect = 5e-53 Identities = 187/213 (87%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||| | Sbjct: 1035 tgggggataagcttcattgtcgagagggaaacagcccagatcatcagctaaggcccctga 1094 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 ||| ||||| |||| |||||||||| | ||| | ||| ||||||||||||| ||||| Sbjct: 1095 atggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggaggtttgcttagaa 1154 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||||||||||||||||||||||||||| | |||| ||||||| ||| || Sbjct: 1155 gcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgaaaat 1214 Query: 189 gaacggggctaagcgatctgccgaagctgtggg 221 ||||||| ||||||| |||||||||||||||| Sbjct: 1215 gaacgggactaagcggcctgccgaagctgtggg 1247
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 236 bits (119), Expect = 6e-59 Identities = 197/223 (88%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct: 5944453 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaag 5944394 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 | ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||||||||| Sbjct: 5944393 gtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggttt 5944334 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||| || |||| |||||| Sbjct: 5944333 gcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgcg 5944274 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggat 223 | ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5944273 ccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5944231 Score = 236 bits (119), Expect = 6e-59 Identities = 197/223 (88%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct: 4916809 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaag 4916750 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 | ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||||||||| Sbjct: 4916749 gtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggttt 4916690 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||| || |||| |||||| Sbjct: 4916689 gcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgcg 4916630 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggat 223 | ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4916629 ccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 4916587 Score = 236 bits (119), Expect = 6e-59 Identities = 197/223 (88%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct: 2503487 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaag 2503546 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 | ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||||||||| Sbjct: 2503547 gtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggttt 2503606 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||| || |||| |||||| Sbjct: 2503607 gcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgcg 2503666 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggat 223 | ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2503667 ccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2503709 Score = 236 bits (119), Expect = 6e-59 Identities = 197/223 (88%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct: 2378696 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaag 2378755 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 | ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||||||||| Sbjct: 2378756 gtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggttt 2378815 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||| || |||| |||||| Sbjct: 2378816 gcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgcg 2378875 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggat 223 | ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2378876 ccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2378918 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 294 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 353 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5944159 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5944100 Query: 354 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 413 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 5944099 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 5944040 Query: 414 cgaaaggcgtagtcgatggaca 435 |||||||||||||||||||||| Sbjct: 5944039 cgaaaggcgtagtcgatggaca 5944018 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 294 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 353 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 4916515 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 4916456 Query: 354 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 413 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 4916455 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 4916396 Query: 414 cgaaaggcgtagtcgatggaca 435 |||||||||||||||||||||| Sbjct: 4916395 cgaaaggcgtagtcgatggaca 4916374 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 294 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 353 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2503781 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2503840 Query: 354 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 413 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 2503841 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 2503900 Query: 414 cgaaaggcgtagtcgatggaca 435 |||||||||||||||||||||| Sbjct: 2503901 cgaaaggcgtagtcgatggaca 2503922 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 294 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 353 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2380461 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2380520 Query: 354 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 413 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 2380521 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 2380580 Query: 414 cgaaaggcgtagtcgatggaca 435 |||||||||||||||||||||| Sbjct: 2380581 cgaaaggcgtagtcgatggaca 2380602
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 230 bits (116), Expect = 4e-57 Identities = 194/220 (88%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct: 2486 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaag 2545 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 | ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||||||| Sbjct: 2546 gtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggaggttt 2605 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||| |||||| ||||||||||||||||||||||| || ||||| | |||| Sbjct: 2606 gcctagaagcagcaacccttaaaagagtgcgtaatagctcactggtcaagcgctcctgcg 2665 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgg 220 | ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2666 ccgaaaatgaacggggctaagttatctaccgaagctgtgg 2705 Score = 135 bits (68), Expect = 2e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 296 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 355 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2778 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2837 Query: 356 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 415 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||| | Sbjct: 2838 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaaggcgaggctg 2897 Query: 416 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 455 ||| |||||||||||||||||| ||| || ||||| |||| Sbjct: 2898 aaaagcgtagtcgatggacaacgggttaacattcccgtac 2937
>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial sequence Length = 2385 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct: 571 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaag 630 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 | ||| |||| | | || |||||||||||||||| | |||| ||||| | ||||||||| Sbjct: 631 gtccccaaatcatcactaagtgataaaggaggtgagattgcatagacaactaggaggttt 690 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||| || |||| |||||| Sbjct: 691 gcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcggtcttgcg 750 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggat 223 | ||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 751 ccgaaaatgaacggggctaagtgatgtaccgaagctgtgggat 793 Score = 129 bits (65), Expect = 1e-26 Identities = 128/149 (85%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 ||||||| || |||| |||| || |||||||||||| |||| |||| || |||||| Sbjct: 919 cccgaaaccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaag 978 Query: 407 atcaggccgaaaggcgtagtcgatggaca 435 ||| |||||||||||||||||||||| Sbjct: 979 gcgaggtcgaaaggcgtagtcgatggaca 1007
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 949 tgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactagctaag 1008 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||| |||||| || | ||||| |||||||||| | |||| | ||| ||||||||||| Sbjct: 1009 gccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccaggaggttt 1068 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 || |||||||||||| |||||||||||||||||||||||||||| | ||||| |||||| Sbjct: 1069 gcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttcttgcg 1128 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggat 223 | ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1129 ccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171 Score = 226 bits (114), Expect = 6e-56 Identities = 156/170 (91%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1238 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1297 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 1298 cccgaaaacctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaag 1357 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1358 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1407
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 25758 tgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactagctaag 25817 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||| |||||| || | ||||| |||||||||| | |||| | ||| ||||||||||| Sbjct: 25818 gccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccaggaggttt 25877 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 || |||||||||||| |||||||||||||||||||||||||||| | ||||| |||||| Sbjct: 25878 gcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttcttgcg 25937 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggat 223 | ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25938 ccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980 Score = 226 bits (114), Expect = 6e-56 Identities = 156/170 (91%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 26047 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 26106 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 26107 cccgaaaacctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaag 26166 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 26167 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 26216
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 233 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 292 ||||||||||||||||||||| | ||| | |||||| || ||| | | || |||||| Sbjct: 3019 catcggtaggggagcgttccgtcatagggtgaagcactaacgtaagtgagtgtggacgaa 3078 Query: 293 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 352 |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3079 acggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 3138 Query: 353 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 412 ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 3139 aacccaagggttcctccgcaaggctcgtccacggagggtgagtcaggacctaaggcgagg 3198 Query: 413 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 455 ||||||||||||||||||||| ||| | | |||||||| |||| Sbjct: 3199 ccgaaaggcgtagtcgatggataacggattaatattcccgtac 3241 Score = 184 bits (93), Expect = 2e-43 Identities = 186/217 (85%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 || | ||| |||| ||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtggaagtgcttagacaaccaggaggtttgcttagaa 2897 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 ||||| | |||||||||||||||||||||||||||| || ||||| ||||| ||| || Sbjct: 2898 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgcttctgcgccgaaaat 2957 Query: 189 gaacggggctaagcgatctgccgaagctgtgggatgt 225 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 2958 gaatgggactaagctatttgccgaagctgtgggatgt 2994
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 226 bits (114), Expect = 6e-56 Identities = 195/222 (87%) Strand = Plus / Plus Query: 235 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 294 |||||||||||||||||||| | | | ||||| | || ||| |||||| |||||||| Sbjct: 1273 tcggtaggggagcgttccgctctcgggtgaagctttcacggaagtgggggtggacgaagc 1332 Query: 295 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 354 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1333 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1392 Query: 355 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 414 || |||| ||||||| | ||| ||||||| || |||| ||||||| ||||||| ||||| Sbjct: 1393 cctaagggttcctccactaggctcgtccatggggggttagtcaggacctaagactaggcc 1452 Query: 415 gaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 ||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 1453 gaaaggcgtcgtcgatggaaaacaggttaatattcctgtact 1494 Score = 93.7 bits (47), Expect = 5e-16 Identities = 172/213 (80%), Gaps = 3/213 (1%) Strand = Plus / Plus Query: 10 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 69 |||||||||||| | | ||| ||||||||||||||| ||||||||||||||||||||||| Sbjct: 1030 gggggataagctccgttgtcaagagggaaacagcccagatcaccagctaaggcccctaaa 1089 Query: 70 tgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaag 129 || | || |||| ||||| ||| | ||| | ||| |||||||||| || |||||| Sbjct: 1090 tggtcactaagtggataaggatgtgagaatgcttaaacaaccaggaggttcgcttagaag 1149 Query: 130 cagc---caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 186 |||| | |||| ||||||||||||||||||||||| | |||| ||||||| || Sbjct: 1150 cagctatcttccttgaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgaga 1209 Query: 187 atgaacggggctaagcgatctgccgaagctgtg 219 ||| |||| ||||| || |||||||||||||| Sbjct: 1210 atggccgggactaagtgacctgccgaagctgtg 1242
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 224 bits (113), Expect = 2e-55 Identities = 179/201 (89%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct: 571 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaag 630 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 | ||| |||| || ||||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 631 gtccccaaataacacctcagtgataaaggaggtgggaatgcagagacaaccaggaggttt 690 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||| |||| ||||||||||||||||||||||| || |||| | |||| Sbjct: 691 gcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttcctgcg 750 Query: 181 ctgaagatgaacggggctaag 201 | ||| ||||||||||||||| Sbjct: 751 ccgaaaatgaacggggctaag 771 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 860 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 919 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 || |||| || |||| |||||||| |||| |||||| ||||||||||||| ||||||||| Sbjct: 920 cctgaaatcctaagggttcctccggaaggctcgtccgcggagggtgagtcggggcctaag 979 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 ||| |||||| ||||||||||||||||| ||| || ||||| ||||| Sbjct: 980 gcgaggtcgaaagacgtagtcgatggacaactggtgaagattccagtact 1029
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 222 bits (112), Expect = 9e-55 Identities = 194/220 (88%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct: 570 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaag 629 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 | ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||||||| Sbjct: 630 gtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggaggttt 689 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| ||||||||||||||||||||||| || ||||| | | || Sbjct: 690 gcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcct-cg 748 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgg 220 | ||| ||||||||||||||| |||| |||||||||||| Sbjct: 749 ccgaaaatgaacggggctaagttatctaccgaagctgtgg 788 Score = 135 bits (68), Expect = 2e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 296 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 355 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 861 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 920 Query: 356 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 415 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||| | Sbjct: 921 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaaggcgaggctg 980 Query: 416 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 455 ||| |||||||||||||||||| ||| || ||||| |||| Sbjct: 981 aaaagcgtagtcgatggacaacgggttaacattcccgtac 1020
>gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, partial sequence Length = 2383 Score = 222 bits (112), Expect = 9e-55 Identities = 216/249 (86%), Gaps = 5/249 (2%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| || |||||||||||| ||| || Sbjct: 579 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggtccccaa 638 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 || | |||| ||||| |||||||||| | ||||| ||||| | ||||||||||||||||| Sbjct: 639 atcatcgctaagtgagaaaggaggtgagagtgcatagacaactaggaggtttgcctagaa 698 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| |||||||||||||||||||||| || ||||| ||| ||| ||| || Sbjct: 699 gcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctctt-cgccgaaaat 757 Query: 189 gaacggggctaagcgatctgccgaagctgtgggatgt----caaaatgcatcggtagggg 244 ||||||||||||||||| | ||||||||||||||| | ||||| ||||||||||| Sbjct: 758 gaacggggctaagcgatgtaccgaagctgtgggatttgttgaaaaataaatcggtagggg 817 Query: 245 agcgttccg 253 ||||||||| Sbjct: 818 agcgttccg 826 Score = 73.8 bits (37), Expect = 5e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 |||||| |||||| ||||||||||||||||||| || ||| || ||||||||| || | Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaatatgtgtgagaatcacatac 920 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 ||||||| || |||| |||| || |||||||||| | |||| |||| || |||||| Sbjct: 921 cccgaaaccctaagggttccagagccaggttcgtccgctctgggttagtccggacctaag 980 Query: 407 atcaggccgaaaggcgtagtcgatggaca 435 ||| |||||||||||||||||||||| Sbjct: 981 gcgaggtcgaaaggcgtagtcgatggaca 1009
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 222 bits (112), Expect = 9e-55 Identities = 193/220 (87%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 2050901 tgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaactaag 2050842 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||| || | ||||||||||| |||||||||||||||| ||||| |||||||||| Sbjct: 2050841 gcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggaggttg 2050782 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 || ||||||||||||||||||||| ||||||||| |||| |||| || |||||||||||| Sbjct: 2050781 gcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgcccttgcg 2050722 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgg 220 | ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 2050721 ccgaaaatggacggggctaagcgatgcgccgaagttgtgg 2050682 Score = 222 bits (112), Expect = 9e-55 Identities = 193/220 (87%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 1450600 tgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaactaag 1450659 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||| || | ||||||||||| |||||||||||||||| ||||| |||||||||| Sbjct: 1450660 gcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggaggttg 1450719 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 || ||||||||||||||||||||| ||||||||| |||| |||| || |||||||||||| Sbjct: 1450720 gcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgcccttgcg 1450779 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgg 220 | ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 1450780 ccgaaaatggacggggctaagcgatgcgccgaagttgtgg 1450819 Score = 153 bits (77), Expect = 7e-34 Identities = 167/197 (84%) Strand = Plus / Minus Query: 237 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 296 |||||||||||||||||| ||| | ||||| | |||||||| | || ||||| |||| Sbjct: 2050673 ggtaggggagcgttccgcagtagggtgaagcgtcagcgaaagcagacgtggacgaggcgg 2050614 Query: 297 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 356 ||| |||||||| |||||||||| || | ||||||||||||||||||||||||||||||| Sbjct: 2050613 aagtgagaatgttggcttgagtagcgcagacattggtgagaatccaatgccccgaaaacc 2050554 Query: 357 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 416 ||||| |||| ||| |||| |||||| ||| |||| |||| || |||||| ||||||| Sbjct: 2050553 caagggttcccccggaaggctcgtccgcggggggttagtcgggacctaaggcgaggccga 2050494 Query: 417 aaggcgtagtcgatgga 433 |||||||||||||||| Sbjct: 2050493 caggcgtagtcgatgga 2050477 Score = 153 bits (77), Expect = 7e-34 Identities = 167/197 (84%) Strand = Plus / Plus Query: 237 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 296 |||||||||||||||||| ||| | ||||| | ||| |||| | || ||||| |||| Sbjct: 1450828 ggtaggggagcgttccgcagtagggtgaagcgtcagcggaagcagacgtggacgaggcgg 1450887 Query: 297 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 356 ||| |||||||| |||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1450888 aagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaacc 1450947 Query: 357 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 416 ||||| |||| ||| |||| |||||| ||| |||| |||| || |||||| ||||||| Sbjct: 1450948 caagggttcccccggaaggctcgtccgcggggggttagtcgggacctaaggcgaggccga 1451007 Query: 417 aaggcgtagtcgatgga 433 |||||||||||||||| Sbjct: 1451008 caggcgtagtcgatgga 1451024
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 220 bits (111), Expect = 3e-54 Identities = 190/215 (88%), Gaps = 1/215 (0%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| || |||||||||||| ||| || Sbjct: 579 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggtccccaa 638 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 || | |||| |||||||||||||||| | ||||| ||||| | ||||||||||||||||| Sbjct: 639 atcatcgctaagtgataaaggaggtgagagtgcacagacaactaggaggtttgcctagaa 698 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| |||||||||||||||||||||| || ||||| | | ||| ||| || Sbjct: 699 gcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctcct-cgccgaaaat 757 Query: 189 gaacggggctaagcgatctgccgaagctgtgggat 223 ||||||||||||||||| | ||||||||||||||| Sbjct: 758 gaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 ||||||| || |||||||||||||| |||||||||| |||||||| ||||||| |||||| Sbjct: 919 cccgaaaccctaaggtttcctccgccaggttcgtccccggagggttagtcaggacctaag 978 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 |||||||| ||||||||||||||||||| ||| || ||||| ||||| Sbjct: 979 gcgaggccgaacggcgtagtcgatggacaacgggttaaaattcccgtact 1028 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 atcggtaggggagcgttccg 253 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824
>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial sequence Length = 2390 Score = 220 bits (111), Expect = 3e-54 Identities = 196/223 (87%), Gaps = 1/223 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct: 571 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaag 630 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 | ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||||||||| Sbjct: 631 gtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggttt 690 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 |||||||||||||||||||| |||||||||||||||||||||| || |||| ||| || Sbjct: 691 gcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatctt-cg 749 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggat 223 | ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 750 ccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 294 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 353 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Query: 354 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 413 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 927 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 986 Query: 414 cgaaaggcgtagtcgatggaca 435 |||||||||||||||||||||| Sbjct: 987 cgaaaggcgtagtcgatggaca 1008
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 220 bits (111), Expect = 3e-54 Identities = 195/223 (87%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 137446 tgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagctaag 137505 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| |||||| Sbjct: 137506 gcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaaggttt 137565 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 || |||||||||||| |||| ||||||||||||||||||||||| | ||||| |||||| Sbjct: 137566 gcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttcttgcg 137625 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggat 223 | ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137626 ccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 220 bits (111), Expect = 3e-54 Identities = 195/223 (87%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 48098 tgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagctaag 48039 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| |||||| Sbjct: 48038 gcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaaggttt 47979 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 || |||||||||||| |||| ||||||||||||||||||||||| | ||||| |||||| Sbjct: 47978 gcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttcttgcg 47919 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgggat 223 | ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47918 ccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876 Score = 210 bits (106), Expect = 3e-51 Identities = 154/170 (90%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 137740 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 137799 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||||||| |||| ||||||| ||||| ||||||| ||||||||||||||| |||||| Sbjct: 137800 cccgaaaacctaagggttcctccacaaggctcgtccatggagggtgagtcaggacctaag 137859 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 137860 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 137909 Score = 210 bits (106), Expect = 3e-51 Identities = 154/170 (90%) Strand = Plus / Minus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 47804 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 47745 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||||||| |||| ||||||| ||||| ||||||| ||||||||||||||| |||||| Sbjct: 47744 cccgaaaacctaagggttcctccacaaggctcgtccatggagggtgagtcaggacctaag 47685 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 47684 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 47635
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 220 bits (111), Expect = 3e-54 Identities = 156/171 (91%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1385 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 1386 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1445 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 457 | ||||| |||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1446 actaggccaaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1496 Score = 157 bits (79), Expect = 4e-35 Identities = 178/211 (84%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 1041 tgggggataagcttcatggtcaagagggaaacagcccagatcaccagctaaggcccctaa 1100 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 || | || |||| |||||| ||| | ||| | ||| ||||||||||||| ||||| Sbjct: 1101 gtggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaa 1160 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| ||||||||||||||||||||||| | |||| ||||||| || || Sbjct: 1161 gcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataat 1220 Query: 189 gaacggggctaagcgatctgccgaagctgtg 219 | |||| ||||| || |||||||||||||| Sbjct: 1221 ggccgggactaagtgacctgccgaagctgtg 1251
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 220 bits (111), Expect = 3e-54 Identities = 156/171 (91%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1385 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 1386 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1445 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 457 | ||||| |||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1446 actaggccaaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1496 Score = 157 bits (79), Expect = 4e-35 Identities = 178/211 (84%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 1041 tgggggataagcttcatggtcaagagggaaacagcccagatcaccagctaaggcccctaa 1100 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 || | || |||| |||||| ||| | ||| | ||| ||||||||||||| ||||| Sbjct: 1101 gtggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaa 1160 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| ||||||||||||||||||||||| | |||| ||||||| || || Sbjct: 1161 gcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataat 1220 Query: 189 gaacggggctaagcgatctgccgaagctgtg 219 | |||| ||||| || |||||||||||||| Sbjct: 1221 ggccgggactaagtgacctgccgaagctgtg 1251
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 218 bits (110), Expect = 1e-53 Identities = 191/218 (87%) Strand = Plus / Plus Query: 3 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 62 ||||| ||||||||||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 3327971 agacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagctaaggt 3328030 Query: 63 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 122 ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||||||||| Sbjct: 3328031 ccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggaggtttgc 3328090 Query: 123 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 182 ||||||||||| | |||| ||||||||||||||||||||||| || ||||| | ||||| Sbjct: 3328091 ctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcctgcgcc 3328150 Query: 183 gaagatgaacggggctaagcgatctgccgaagctgtgg 220 ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 3328151 gaaaatgaacggggctaagtgatgtaccgaagctgtgg 3328188 Score = 218 bits (110), Expect = 1e-53 Identities = 191/218 (87%) Strand = Plus / Minus Query: 3 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 62 ||||| ||||||||||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 2450757 agacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagctaaggt 2450698 Query: 63 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 122 ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||||||||| Sbjct: 2450697 ccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggaggtttgc 2450638 Query: 123 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 182 ||||||||||| | |||| ||||||||||||||||||||||| || ||||| | ||||| Sbjct: 2450637 ctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcctgcgcc 2450578 Query: 183 gaagatgaacggggctaagcgatctgccgaagctgtgg 220 ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 2450577 gaaaatgaacggggctaagtgatgtaccgaagctgtgg 2450540 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 296 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 355 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 3328262 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 3328321 Query: 356 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 415 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 3328322 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 3328381 Query: 416 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 3328382 agaggcgtagtcgatggacaaccggtcaatattccggtact 3328422 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 296 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 355 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 2450466 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 2450407 Query: 356 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 415 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 2450406 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 2450347 Query: 416 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 2450346 agaggcgtagtcgatggacaaccggtcaatattccggtact 2450306
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 216 bits (109), Expect = 5e-53 Identities = 179/201 (89%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct: 572 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaag 631 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 | ||| |||| ||| || ||||| |||||||||||| ||||| ||||| ||||||||||| Sbjct: 632 gtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggaggttt 691 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | | || Sbjct: 692 gcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctcct-cg 750 Query: 181 ctgaagatgaacggggctaag 201 | ||| ||||||||||||||| Sbjct: 751 ccgaaaatgaacggggctaag 771 Score = 127 bits (64), Expect = 4e-26 Identities = 139/164 (84%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||||||||||| ||||||||||||||||||| |||||| | ||||||||||| | | Sbjct: 857 gacgaagcggaagtgagaatgtcggcttgagtagcgaaaatttaggtgagaatcctaaac 916 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 ||||||| || |||| |||||||| | || |||||| ||||||||||||||||||||||| Sbjct: 917 cccgaaaccctaagggttcctccggacggctcgtccgcggagggtgagtcagggcctaag 976 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcc 450 |||| ||| |||||||||||||| ||| ||| || ||||| Sbjct: 977 gcgaggctgaacagcgtagtcgatggataacgggttaaaattcc 1020
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 216 bits (109), Expect = 5e-53 Identities = 154/169 (91%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 |||||| |||||| ||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 1726 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacattggtgaaaatccaatgc 1785 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 ||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| |||||| Sbjct: 1786 cccgaaaacccaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaag 1845 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 455 |||||||||||||||||||||||| ||| ||| |||||||| |||| Sbjct: 1846 gcgaggccgaaaggcgtagtcgatggataacgggttaatattcccgtac 1894 Score = 216 bits (109), Expect = 5e-53 Identities = 190/217 (87%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 || | ||| |||| ||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 1529 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 ||||| | |||||||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1530 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1589 Query: 189 gaacggggctaagcgatctgccgaagctgtgggatgt 225 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 1590 gaaagggactaagctatttgccgaagctgtgggatgt 1626
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct: 2485 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaag 2544 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 | ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||||||| Sbjct: 2545 gtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggaggttt 2604 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||| ||||| | |||| ||||||||||||||||||||||| || ||||| | |||| Sbjct: 2605 gcctagaggcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcctgcg 2664 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgg 220 | ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2665 ccgaaaatgaacggggctaagttatctaccgaagctgtgg 2704 Score = 127 bits (64), Expect = 4e-26 Identities = 136/160 (85%) Strand = Plus / Plus Query: 296 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 355 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2777 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2836 Query: 356 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 415 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||| | Sbjct: 2837 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaaggcgaggctg 2896 Query: 416 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 455 ||| |||||||||||||| ||| ||| || ||||| |||| Sbjct: 2897 aaaagcgtagtcgatggataacgggttaacattcccgtac 2936
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| ||||| Sbjct: 2313251 tgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaactaag 2313310 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||| || | ||||||||| | |||||||||||||||| |||||| |||||||||| Sbjct: 2313311 gcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggaggttg 2313370 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 || ||||||||||||||||||||| ||||||||| |||| |||| || |||||||||||| Sbjct: 2313371 gcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgcccttgcg 2313430 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgg 220 | ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 2313431 ccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 2313470 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Minus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| ||||| Sbjct: 1108596 tgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaactaag 1108537 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||| || | ||||||||| | |||||||||||||||| |||||| |||||||||| Sbjct: 1108536 gcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggaggttg 1108477 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 || ||||||||||||||||||||| ||||||||| |||| |||| || |||||||||||| Sbjct: 1108476 gcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgcccttgcg 1108417 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtgg 220 | ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 1108416 ccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 1108377 Score = 161 bits (81), Expect = 3e-36 Identities = 132/149 (88%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 2313529 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 2313588 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 ||||||||||||||| |||| ||| ||||||||||| ||| |||| |||| || |||||| Sbjct: 2313589 cccgaaaacccaagggttcccccggaaggttcgtccgcggggggttagtcgggacctaag 2313648 Query: 407 atcaggccgaaaggcgtagtcgatggaca 435 ||||||| |||||||||||||||||| Sbjct: 2313649 gcgaggccgacaggcgtagtcgatggaca 2313677 Score = 161 bits (81), Expect = 3e-36 Identities = 132/149 (88%) Strand = Plus / Minus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 1108318 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 1108259 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 ||||||||||||||| |||| ||| ||||||||||| ||| |||| |||| || |||||| Sbjct: 1108258 cccgaaaacccaagggttcccccggaaggttcgtccgcggggggttagtcgggacctaag 1108199 Query: 407 atcaggccgaaaggcgtagtcgatggaca 435 ||||||| |||||||||||||||||| Sbjct: 1108198 gcgaggccgacaggcgtagtcgatggaca 1108170
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 212 bits (107), Expect = 8e-52 Identities = 189/215 (87%), Gaps = 1/215 (0%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| || |||||||||||| ||| || Sbjct: 579 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggtccccaa 638 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 || | ||| |||||||||||||||||| ||||| ||||| | ||||||||||||||||| Sbjct: 639 atcattgctaagtgataaaggaggtgggagtgcagagacaactaggaggtttgcctagaa 698 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| |||||||||||||||||||||| || ||||| | | ||| ||| || Sbjct: 699 gcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctcct-cgccgaaaat 757 Query: 189 gaacggggctaagcgatctgccgaagctgtgggat 223 |||||||||||||| || | ||||||||||||||| Sbjct: 758 gaacggggctaagcaatgtaccgaagctgtgggat 792 Score = 99.6 bits (50), Expect = 9e-18 Identities = 119/142 (83%) Strand = Plus / Plus Query: 294 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 353 |||||| ||||||||||||||||||| || ||| | ||||||||| | |||||||| Sbjct: 868 cggaagtgagaatgtcggcttgagtagcgcaaatgtatgtgagaatcatacaccccgaaa 927 Query: 354 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 413 || |||| ||||||||| ||||||||||||||||||| |||| || |||||| ||| Sbjct: 928 ccctaagggttcctccgccaggttcgtccacggagggttagtcgggtcctaaggcgaggt 987 Query: 414 cgaaaggcgtagtcgatggaca 435 |||| ||||||||||||||||| Sbjct: 988 cgaagggcgtagtcgatggaca 1009
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 212 bits (107), Expect = 8e-52 Identities = 188/215 (87%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 ||| ||||| |||| |||||||||| |||||||||| |||| |||||||| ||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtgaaaatgcaaagacaaccagaaggtttgcttagaa 1118 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 1119 gcagccacccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 1178 Query: 189 gaacggggctaagcgatctgccgaagctgtgggat 223 ||||||| ||||||| |||||||||||||||||| Sbjct: 1179 gaacgggactaagcggcctgccgaagctgtgggat 1213 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||| || |||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1281 gacgacgcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgg 1340 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||||||| |||| ||||| ||||| ||||||| | ||||| ||||||| |||||| Sbjct: 1341 cccgaaaacctaagggttcctttacaaggctcgtccatgaagggttagtcaggtcctaag 1400 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 ||| |||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 1401 gcgaggtcgaaaggcgtagtcgatggaaaacaggtcaacattcctgtact 1450
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 212 bits (107), Expect = 8e-52 Identities = 188/215 (87%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| ||||| ||||||||||||| | Sbjct: 945 tgggggataagcttcattgtcaagagggaaacagcccagatcatcagctaaggccccaga 1004 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 ||| ||||| |||| ||||||||||| | |||| | ||||||||||||||||| ||||| Sbjct: 1005 atggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggaggtttgcttagaa 1064 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||||||||||||||||||||||||||| | ||||| ||||||| ||| || Sbjct: 1065 gcagccaccctttaaagagtgcgtaatagctcactggtggagcgttcttgcgccgaaaat 1124 Query: 189 gaacggggctaagcgatctgccgaagctgtgggat 223 ||||| ||||||| ||||||||||| |||||| Sbjct: 1125 tcacgggactaagcggcctgccgaagctatgggat 1159 Score = 210 bits (106), Expect = 3e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 291 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 350 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1236 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1295 Query: 351 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 410 |||||| |||| ||||||| | ||||||||||| ||||||| ||||||| ||||| || Sbjct: 1296 aaaacctaagggttcctccactaggttcgtccatggagggttagtcaggacctaaagcca 1355 Query: 411 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 |||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 1356 ggccgaaaggcgtagttgatggaaaacaggttaatattcctgtact 1401 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 atcggtaggggagcgttccg 253 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 210 bits (106), Expect = 3e-51 Identities = 190/218 (87%) Strand = Plus / Minus Query: 3 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 62 ||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 2333864 agacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccagctaaggt 2333805 Query: 63 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 122 ||| |||| | | || |||| ||||||||||||| ||| ||||| ||||||||||||| Sbjct: 2333804 ccccaaatcatcactaagtggcaaaggaggtggggatgctcagacaaccaggaggtttgc 2333745 Query: 123 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 182 ||||||||||||| |||| ||||||||||||||||||||||| || |||| | ||||| Sbjct: 2333744 ctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttcctgcgcc 2333685 Query: 183 gaagatgaacggggctaagcgatctgccgaagctgtgg 220 ||| ||||||||| ||||| ||| | |||||||||||| Sbjct: 2333684 gaaaatgaacgggactaagtgatgtaccgaagctgtgg 2333647 Score = 186 bits (94), Expect = 5e-44 Identities = 151/170 (88%) Strand = Plus / Minus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 |||||||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 2333581 gacgaagcagaagtgagaatgccggcttgagtagcgaaaacattggtgagaatccaatgc 2333522 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 ||||||| ||||||| ||||| || |||| |||||| || ||||| |||| || |||||| Sbjct: 2333521 cccgaaaccccaagggttccttcggaaggctcgtccgcgaagggttagtcgggacctaag 2333462 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 |||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 2333461 gcgaggccgaaaggcgtagtcgatggacaactggtcaatattccagtact 2333412
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 210 bits (106), Expect = 3e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 291 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 350 |||| |||| |||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 2999 aagcagaagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccg 3058 Query: 351 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 410 |||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct: 3059 aaaacctaaggtttcctctggaaggttcgtccacggagggtgagtcagggcctaaggcga 3118 Query: 411 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 ||| |||| |||||||||||||| |||||| |||||||||||||| Sbjct: 3119 ggctgaaaagcgtagtcgatggatgacaggttaatattcctgtact 3164 Score = 155 bits (78), Expect = 2e-34 Identities = 205/244 (84%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 2721 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 2780 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 || || |||| |||||| ||||| |||| ||||| ||||||||||||| ||||| Sbjct: 2781 atatttactaagtggcaaaggaagtgggaatgcatagacaaccaggaggtttgcttagaa 2840 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 ||||| |||||||||||||||||||||||||||||| || || | | ||||| ||| || Sbjct: 2841 gcagcaaccctttaaagagtgcgtaatagctcactggtccagtgatcctgcgccgaaaat 2900 Query: 189 gaacggggctaagcgatc-tgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 247 ||| ||| || || ||| ||||||||||||||||||| || ||||||||||||||| Sbjct: 2901 gaatgggacttag-tatcttgccgaagctgtgggatgtttaa---catcggtaggggagc 2956 Query: 248 gttc 251 |||| Sbjct: 2957 gttc 2960
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 208 bits (105), Expect = 1e-50 Identities = 178/201 (88%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||| Sbjct: 571 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaag 630 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 | ||| |||| || ||||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 631 gtcccaaaataacacctcagtgataaaggaggtgggaatgcagagacaaccaggaggttt 690 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||| |||| ||||||||||||||||||||||| || |||| | | || Sbjct: 691 gcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttcct-cg 749 Query: 181 ctgaagatgaacggggctaag 201 | ||| ||||||||||||||| Sbjct: 750 ccgaaaatgaacggggctaag 770 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 858 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 917 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 || |||| || |||| |||||||| |||| |||||| ||||||||||||| ||||||||| Sbjct: 918 cctgaaatcctaagggttcctccggaaggctcgtccgcggagggtgagtcggggcctaag 977 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 ||| |||||| ||||||||||||||||| ||| || ||||| ||||| Sbjct: 978 gcgaggtcgaaagacgtagtcgatggacaactggtgaagattccagtact 1027
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Minus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151116 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 151057 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 151056 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 150997 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 455 | ||||| || ||||| ||||||||| ||||||| ||||||||||||| Sbjct: 150996 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 150948 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43087 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 43146 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 43147 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 43206 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 455 | ||||| || ||||| ||||||||| ||||||| ||||||||||||| Sbjct: 43207 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 43255 Score = 165 bits (83), Expect = 2e-37 Identities = 179/211 (84%) Strand = Plus / Minus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 151401 tgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaa 151342 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 ||| | || |||| |||||| ||| | ||| | ||| ||||||||||||| ||||| Sbjct: 151341 atggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaa 151282 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| ||||||||||||||||||||||| | |||| ||||||| || || Sbjct: 151281 gcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataat 151222 Query: 189 gaacggggctaagcgatctgccgaagctgtg 219 | |||| ||||| || |||||||||||||| Sbjct: 151221 ggccgggactaagtgacctgccgaagctgtg 151191 Score = 165 bits (83), Expect = 2e-37 Identities = 179/211 (84%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 42802 tgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaa 42861 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 ||| | || |||| |||||| ||| | ||| | ||| ||||||||||||| ||||| Sbjct: 42862 atggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaa 42921 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| ||||||||||||||||||||||| | |||| ||||||| || || Sbjct: 42922 gcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataat 42981 Query: 189 gaacggggctaagcgatctgccgaagctgtg 219 | |||| ||||| || |||||||||||||| Sbjct: 42982 ggccgggactaagtgacctgccgaagctgtg 43012
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1259 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1318 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 1319 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1378 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 455 | ||||| || ||||| ||||||||| ||||||| ||||||||||||| Sbjct: 1379 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 1427 Score = 165 bits (83), Expect = 2e-37 Identities = 179/211 (84%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 974 tgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaa 1033 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 ||| | || |||| |||||| ||| | ||| | ||| ||||||||||||| ||||| Sbjct: 1034 atggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaa 1093 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| ||||||||||||||||||||||| | |||| ||||||| || || Sbjct: 1094 gcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataat 1153 Query: 189 gaacggggctaagcgatctgccgaagctgtg 219 | |||| ||||| || |||||||||||||| Sbjct: 1154 ggccgggactaagtgacctgccgaagctgtg 1184
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 208 bits (105), Expect = 1e-50 Identities = 144/157 (91%) Strand = Plus / Plus Query: 301 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1287 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaag 1346 Query: 361 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 420 | ||||||| | ||||||||||| || |||| ||||||| ||||||| |||||| ||||| Sbjct: 1347 ggttcctccactaggttcgtccatggggggttagtcaggacctaagaccaggccaaaagg 1406 Query: 421 cgtagtcgatggacaacaggtcaatattcctgtacta 457 ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1407 cgtcgtcgatggaaaacaggttaatattcctgtacta 1443 Score = 167 bits (84), Expect = 4e-38 Identities = 180/212 (84%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 990 tgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaa 1049 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 ||| | || |||| |||||| ||| | ||| | ||| ||||||||||||| ||||| Sbjct: 1050 atggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaa 1109 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| ||||||||||||||||||||||| | |||| ||||||| || || Sbjct: 1110 gcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataat 1169 Query: 189 gaacggggctaagcgatctgccgaagctgtgg 220 | |||| ||||| || ||||||||||||||| Sbjct: 1170 ggccgggactaagtgacctgccgaagctgtgg 1201
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 206 bits (104), Expect = 5e-50 Identities = 188/216 (87%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || || |||||||| Sbjct: 961 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagctaag 1020 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||||||| Sbjct: 1021 gcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggaggttt 1080 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 || ||||||||||||||||||||||||||||||||||||||||| | |||| |||||| Sbjct: 1081 gcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttcttgcg 1140 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagct 216 | ||| |||| |||| ||||||| ||||||||||| Sbjct: 1141 ccgaaaatgatcgggactaagcggcctgccgaagct 1176 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Plus Query: 237 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 296 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 1208 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 1267 Query: 297 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 356 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1268 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 1327 Query: 357 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 408 |||| ||||||| | ||||||||||| ||||||||||||||| |||||||| Sbjct: 1328 taagggttcctccactaggttcgtccatggagggtgagtcaggtcctaagat 1379 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 422 gtagtcgatggacaacaggtcaatattcctgtact 456 |||||||||||| ||||||| |||||||||||||| Sbjct: 1397 gtagtcgatggaaaacaggttaatattcctgtact 1431
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 206 bits (104), Expect = 5e-50 Identities = 188/216 (87%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||| ||||||||||||||| || || |||||||| Sbjct: 2843 tgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagctaag 2902 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||||||| Sbjct: 2903 gcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggaggttt 2962 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 || ||||||||||||||||||||||||||||||||||||||||| | |||| |||||| Sbjct: 2963 gcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttcttgcg 3022 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagct 216 | ||| |||| |||| ||||||| ||||||||||| Sbjct: 3023 ccgaaaatgatcgggactaagcggcctgccgaagct 3058 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Plus Query: 237 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 296 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 3090 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 3149 Query: 297 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 356 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3150 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 3209 Query: 357 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 408 |||| ||||||| | ||||||||||| ||||||||||||||| |||||||| Sbjct: 3210 taagggttcctccactaggttcgtccatggagggtgagtcaggtcctaagat 3261 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 422 gtagtcgatggacaacaggtcaatattcctgtact 456 |||||||||||| ||||||| |||||||||||||| Sbjct: 3279 gtagtcgatggaaaacaggttaatattcctgtact 3313
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 204 bits (103), Expect = 2e-49 Identities = 184/211 (87%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| ||||||||||||||| || |||||||||||| ||| || Sbjct: 579 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggtccccaa 638 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 || | |||| | |||||||||||||||| ||||| ||||| | ||||||||||||||||| Sbjct: 639 atcagcgctaattgataaaggaggtgggagtgcatagacaactaggaggtttgcctagaa 698 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| |||||||||||||||||||||| || ||||| | ||||| ||| || Sbjct: 699 gcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctcctgcgccgaatat 758 Query: 189 gaacggggctaagcgatctgccgaagctgtg 219 |||||||||| ||| || | ||||| ||||| Sbjct: 759 gaacggggctgagccatgtaccgaaactgtg 789 Score = 65.9 bits (33), Expect = 1e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 |||||| |||||| ||||||||||||||||||| || ||| | ||||||||| | | Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaatgtatgtgagaatcatacac 920 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 ||||||| || |||| |||| || |||||||||||| |||| |||| || |||||| Sbjct: 921 cccgaaaccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaag 980 Query: 407 atcaggccgaaaggcgtagtcgatggaca 435 |||||||| ||||||||||||||||| Sbjct: 981 gcgaggccgaacggcgtagtcgatggaca 1009
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Plus Query: 294 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 353 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1872 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1931 Query: 354 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 413 ||| |||| |||||| ||||||||||||| || |||| |||||||||||||| |||| Sbjct: 1932 acctaagggttcctctacaaggttcgtccatggggggttagtcagggcctaaggcgaggc 1991 Query: 414 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 |||| ||||||||||||||| ||||||| |||||||||||||| Sbjct: 1992 cgaatggcgtagtcgatggaaaacaggttaatattcctgtact 2034 Score = 109 bits (55), Expect = 9e-21 Identities = 154/187 (82%) Strand = Plus / Plus Query: 33 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 92 ||||||||||||| ||||||||||||||||||||||||| || || |||| |||||| | Sbjct: 1346 agggaaacagcccagatcaccagctaaggcccctaaatggccactaagtggaaaaggatg 1405 Query: 93 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 152 || | |||| | ||| ||||||||||||| |||||||||| | |||||||||||| ||| Sbjct: 1406 tgagaatgcataaacaaccaggaggtttgcttagaagcagcaatcctttaaagagttcgt 1465 Query: 153 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 212 || || ||||| | |||| ||||||| ||| || | |||| ||||| | ||||||| Sbjct: 1466 aacagaacactggtaaagcgttcttgcgccgaaaataaccgggactaagtggcctgccga 1525 Query: 213 agctgtg 219 ||||||| Sbjct: 1526 agctgtg 1532
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Plus Query: 294 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 353 |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1318 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgtgaatccaatgccccgaaa 1377 Query: 354 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 413 ||| || ||||||| | ||||||||||| || |||||||||||| |||||||| |||| Sbjct: 1378 accgttgggttcctccactaggttcgtccatggggggtgagtcaggacctaagattaggc 1437 Query: 414 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 |||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 1438 cgaaaggcgtcgtcgatggaaaacaggttaatattcctgtact 1480 Score = 129 bits (65), Expect = 1e-26 Identities = 158/189 (83%) Strand = Plus / Plus Query: 31 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 90 ||||||||||||||| ||||| ||||||||||||||||||| | || |||| |||||| Sbjct: 1024 agagggaaacagcccagatcattagctaaggcccctaaatgatcactaagtggaaaagga 1083 Query: 91 ggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgc 150 ||| | ||| | ||| ||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 1084 tgtgagaatgcccaaacaaccaggaggtttgcttagaagcagccacccttgaaagagtgc 1143 Query: 151 gtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgcc 210 |||||||||||||| | |||| |||||| || ||| |||| ||||| |||||||| Sbjct: 1144 gtaatagctcactggtaaagcgtttttgcgccgacaatggccgggactaagtgatctgcc 1203 Query: 211 gaagctgtg 219 ||||||||| Sbjct: 1204 gaagctgtg 1212 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 atcggtaggggagcgttccg 253 |||||||||||||||||||| Sbjct: 1259 atcggtaggggagcgttccg 1278
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 204 bits (103), Expect = 2e-49 Identities = 157/175 (89%) Strand = Plus / Plus Query: 282 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 341 |||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 1496 gggtggacgaagcggaagtgagaatgtcggcttaagtaacgaaaacattggtgagaatcc 1555 Query: 342 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 401 ||||||||||||||| |||| ||||||| | ||| ||||||| || |||| ||||||| | Sbjct: 1556 aatgccccgaaaacctaagggttcctccactaggctcgtccatggggggttagtcaggac 1615 Query: 402 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 |||||| |||||||||||||| ||||||||| |||||| |||||||||||||| Sbjct: 1616 ctaagactaggccgaaaggcgtcgtcgatggaaaacaggcgaatattcctgtact 1670 Score = 69.9 bits (35), Expect = 8e-09 Identities = 112/137 (81%), Gaps = 3/137 (2%) Strand = Plus / Plus Query: 31 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 90 ||||||||||||||| ||||||||| ||||||||| ||||| | || |||| |||||| Sbjct: 1117 agagggaaacagcccagatcaccagataaggccccaaaatggtcactaagtggaaaagga 1176 Query: 91 ggtgggggtgcaaagacagccaggaggtttgcctagaagcagc---caccctttaaagag 147 ||| | ||| | ||| |||||||||| || |||||||||| | |||| |||||| Sbjct: 1177 tgtgagaatgcttaaacaaccaggaggttcgcttagaagcagctatcttccttgaaagag 1236 Query: 148 tgcgtaatagctcactg 164 ||||||||||||||||| Sbjct: 1237 tgcgtaatagctcactg 1253
>gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 202 bits (102), Expect = 8e-49 Identities = 190/218 (87%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 3 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 62 ||||| ||||||||||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 573 agacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagctaaggt 632 Query: 63 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 122 ||| ||||| ||| |||||||||||||||||| |||| ||||| ||||||||||||| Sbjct: 633 ccccaaatggatgctaagtgataaaggaggtgggattgcagagacaaccaggaggtttgc 692 Query: 123 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 182 ||||||||||||| |||| ||||||||||||||||||||||| || |||| | | ||| Sbjct: 693 ctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatcct-cgcc 751 Query: 183 gaagatgaacggggctaagcgatctgccgaagctgtgg 220 ||| |||||||||||||||| || |||||||||||| Sbjct: 752 gaaaatgaacggggctaagcatcctaccgaagctgtgg 789 Score = 135 bits (68), Expect = 2e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 296 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 355 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 866 gaagtgagaatgtcggcttaagtagcgaaaatgtaggtgagaatcctacaccccgaaatc 925 Query: 356 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 415 |||||| |||||||| |||| |||||| |||||||| |||| || |||||| |||||| Sbjct: 926 ccaagggttcctccggaaggctcgtccgcggagggttagtcgggacctaaggcgaggccg 985 Query: 416 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 455 |||||||||||||||||||||| ||| |||||||| |||| Sbjct: 986 aaaggcgtagtcgatggacaacgggttaatattcccgtac 1025
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 202 bits (102), Expect = 8e-49 Identities = 171/194 (88%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||| ||| ||||||||||||||||||| || |||||||||||| ||| || Sbjct: 578 tgggggataagctccatggtcgagagggaaacagcccagaccaccagctaaggtccccaa 637 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 || |||||||||| ||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 638 attgtagctcagtgattaaggaggtgggattgcacagacaaccaggaggtttgcctagaa 697 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 |||||||||||| ||||||||||||||||||||||| || |||| | ||||| ||| || Sbjct: 698 gcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcctgcgccgaaaat 757 Query: 189 gaacggggctaagc 202 |||||||||||||| Sbjct: 758 gaacggggctaagc 771 Score = 157 bits (79), Expect = 4e-35 Identities = 145/167 (86%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 847 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 906 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||| || |||| |||||||| ||||||||||| |||||||| || | || |||||| Sbjct: 907 tccgaaaccctaagggttcctccggaaggttcgtccgcggagggttagccgggacctaag 966 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgt 453 | |||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 967 gcgaagccgaagggcgtagtcgatggataacaggtgtatattcctgt 1013
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 202 bits (102), Expect = 8e-49 Identities = 190/218 (87%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 3 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 62 ||||| || |||||||||| ||||||||||||||||||||||| || |||||||||||| Sbjct: 573 agacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccagctaaggt 632 Query: 63 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 122 ||| ||||| ||| |||||||||||||||||| |||| ||||| ||||||||||||| Sbjct: 633 cccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccaggaggtttgc 692 Query: 123 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 182 ||||||||||||| |||| ||||||||||||||||||||||| || |||| | | ||| Sbjct: 693 ctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatcct-cgcc 751 Query: 183 gaagatgaacggggctaagcgatctgccgaagctgtgg 220 ||| |||||||||||||||| ||| |||||||||||| Sbjct: 752 gaaaatgaacggggctaagcattctaccgaagctgtgg 789 Score = 121 bits (61), Expect = 2e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||| || |||| ||||||||||||||||||| ||||||||| ||||||||| |||| Sbjct: 855 gacgaggcagaagtgagaatgtcggcttgagtagcgaaaacatgtgtgagaatcacatgc 914 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 ||||||| || |||| |||||||| |||| |||||| |||||||| |||| || |||||| Sbjct: 915 cccgaaaccctaagggttcctccggaaggctcgtccgcggagggttagtcgggacctaag 974 Query: 407 atcaggccgaaaggcgtagtcgatggaca 435 | |||||| ||||||||||||||||| Sbjct: 975 gcgaagccgaagggcgtagtcgatggaca 1003
>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 202 bits (102), Expect = 8e-49 Identities = 190/218 (87%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 3 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 62 ||||| ||||||||||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 574 agacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagctaaggt 633 Query: 63 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 122 ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||||||||| Sbjct: 634 ccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggaggtttgc 693 Query: 123 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 182 ||||||||||| | |||| ||||||||||||||||||||||| || ||||| | | ||| Sbjct: 694 ctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcct-cgcc 752 Query: 183 gaagatgaacggggctaagcgatctgccgaagctgtgg 220 ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 753 gaaaatgaacggggctaagtgatgtaccgaagctgtgg 790 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 296 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 355 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 864 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 923 Query: 356 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 415 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 924 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 983 Query: 416 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 984 agaggcgtagtcgatggacaaccggtcaatattccggtact 1024
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 202 bits (102), Expect = 8e-49 Identities = 147/162 (90%) Strand = Plus / Plus Query: 295 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 354 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1420 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1479 Query: 355 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 414 || |||| ||||||| | |||||||||| || |||||||||||| |||||| |||||| Sbjct: 1480 cctaagggttcctccaccaggttcgtccgtggggggtgagtcaggacctaaggccaggcc 1539 Query: 415 gaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 ||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 1540 gaaaggcgtcgtcgatggcaaacaggttaatattcctgtact 1581 Score = 131 bits (66), Expect = 2e-27 Identities = 132/154 (85%) Strand = Plus / Plus Query: 11 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 70 |||||||||||| || || ||||||||||||||| ||||||||||||||||||| |||| Sbjct: 1021 ggggataagcttgattttcaagagggaaacagcccagatcaccagctaaggccccaaaat 1080 Query: 71 gaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagc 130 | || |||| |||||| ||||| ||| | ||| ||||||||||||| ||||||| Sbjct: 1081 ggtgactaagtggaaaaggatgtgggaatgctgaaacaaccaggaggtttgcttagaagc 1140 Query: 131 agccaccctttaaagagtgcgtaatagctcactg 164 |||||||||| ||||||||||||||||||||||| Sbjct: 1141 agccacccttcaaagagtgcgtaatagctcactg 1174
>gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 200 bits (101), Expect = 3e-48 Identities = 192/221 (86%), Gaps = 1/221 (0%) Strand = Plus / Plus Query: 3 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 62 ||||| || |||||||||| ||||||||||||||||||||||| || | |||||||||| Sbjct: 571 agacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagctaaggt 630 Query: 63 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 122 ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 631 ccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggaggtttgc 690 Query: 123 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 182 ||||||||||| | |||| ||||||||||||||||||||||| || ||||| | | ||| Sbjct: 691 ctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcct-cgcc 749 Query: 183 gaagatgaacggggctaagcgatctgccgaagctgtgggat 223 ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 750 gaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 127 bits (64), Expect = 4e-26 Identities = 133/156 (85%) Strand = Plus / Plus Query: 296 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 355 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| | Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaacc 929 Query: 356 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 415 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 930 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 989 Query: 416 aaaggcgtagtcgatggacaacaggtcaatattcct 451 |||||||||||||||||||| |||| ||||||||| Sbjct: 990 aaaggcgtagtcgatggacatgaggttaatattcct 1025
>gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 200 bits (101), Expect = 3e-48 Identities = 192/221 (86%), Gaps = 1/221 (0%) Strand = Plus / Plus Query: 3 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 62 ||||| || |||||||||| ||||||||||||||||||||||| || | |||||||||| Sbjct: 571 agacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagctaaggt 630 Query: 63 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 122 ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 631 ccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggaggtttgc 690 Query: 123 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 182 ||||||||||| | |||| ||||||||||||||||||||||| || ||||| | | ||| Sbjct: 691 ctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcct-cgcc 749 Query: 183 gaagatgaacggggctaagcgatctgccgaagctgtgggat 223 ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 750 gaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 127 bits (64), Expect = 4e-26 Identities = 133/156 (85%) Strand = Plus / Plus Query: 296 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 355 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| | Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaacc 929 Query: 356 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 415 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 930 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 989 Query: 416 aaaggcgtagtcgatggacaacaggtcaatattcct 451 |||||||||||||||||||| |||| ||||||||| Sbjct: 990 aaaggcgtagtcgatggacatgaggttaatattcct 1025
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 200 bits (101), Expect = 3e-48 Identities = 188/217 (86%) Strand = Plus / Minus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||| ||| ||| ||||||||||||||| || |||||| |||||||||||| Sbjct: 114470 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggcccctaa 114411 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 || ||| |||| |||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 114410 atagtagctaagtggcaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 114351 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 ||||| | |||||||||||||||||||||||||||| || ||||| | ||||| ||| || Sbjct: 114350 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcctgcgccgaaaat 114291 Query: 189 gaacggggctaagcgatctgccgaagctgtgggatgt 225 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 114290 gaatgggactaagctatttgccgaagctgtgggatgt 114254 Score = 200 bits (101), Expect = 3e-48 Identities = 188/217 (86%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||| ||| ||| ||||||||||||||| || |||||| |||||||||||| Sbjct: 3047 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggcccctaa 3106 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 || ||| |||| |||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 3107 atagtagctaagtggcaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 3166 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 ||||| | |||||||||||||||||||||||||||| || ||||| | ||||| ||| || Sbjct: 3167 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcctgcgccgaaaat 3226 Query: 189 gaacggggctaagcgatctgccgaagctgtgggatgt 225 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 3227 gaatgggactaagctatttgccgaagctgtgggatgt 3263 Score = 180 bits (91), Expect = 3e-42 Identities = 146/163 (89%), Gaps = 1/163 (0%) Strand = Plus / Minus Query: 294 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 353 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 114176 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 114117 Query: 354 acccaaggtttcc-tccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 412 ||| |||| |||| | || |||| ||||||||| ||||||||||||| |||||| ||| Sbjct: 114116 acctaagggttcctttcggaaggctcgtccacgaagggtgagtcaggacctaaggcgagg 114057 Query: 413 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 455 ||||||||||||||||||||| ||| |||||| ||||| |||| Sbjct: 114056 ccgaaaggcgtagtcgatggataacgggtcaaaattcccgtac 114014 Score = 180 bits (91), Expect = 3e-42 Identities = 146/163 (89%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 294 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 353 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3341 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 3400 Query: 354 acccaaggtttcc-tccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 412 ||| |||| |||| | || |||| ||||||||| ||||||||||||| |||||| ||| Sbjct: 3401 acctaagggttcctttcggaaggctcgtccacgaagggtgagtcaggacctaaggcgagg 3460 Query: 413 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 455 ||||||||||||||||||||| ||| |||||| ||||| |||| Sbjct: 3461 ccgaaaggcgtagtcgatggataacgggtcaaaattcccgtac 3503 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 catcggtaggggagcgttccg 253 ||||||||||||||||||||| Sbjct: 114237 catcggtaggggagcgttccg 114217 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 catcggtaggggagcgttccg 253 ||||||||||||||||||||| Sbjct: 3280 catcggtaggggagcgttccg 3300
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 198 bits (100), Expect = 1e-47 Identities = 148/164 (90%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 969 tgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagctaag 1028 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||| || ||| |||| |||||||||| ||| ||||| ||||||||||| Sbjct: 1029 gcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggaggttt 1088 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactg 164 || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1089 gcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1261 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 1320 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||||||| |||| ||||| | ||||||||||||| ||||||| ||||||| |||||| Sbjct: 1321 cccgaaaacctaagggttccttcacaaggttcgtccatggagggttagtcaggacctaag 1380 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 || |||||||| ||||||||||| |||||||||| ||||||||||| Sbjct: 1381 gcaagaccgaaaggtgtagtcgatggcaaacaggtcaacattcctgtact 1430
>gb|AC007729.3| Arabidopsis thaliana chromosome 2 BAC T18C6 genomic sequence, complete sequence Length = 114068 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 30 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 89 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 57141 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 57082 Query: 90 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 148 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 57081 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 57022 Query: 149 gcgtaatagctcactg 164 |||||||||||||||| Sbjct: 57021 gcgtaatagctcactg 57006
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 198 bits (100), Expect = 1e-47 Identities = 148/164 (90%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 2707 tgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagctaag 2766 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 |||||||||| || ||| |||| |||||||||| ||| ||||| ||||||||||| Sbjct: 2767 gcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggaggttt 2826 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactg 164 || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2827 gcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 2999 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 3058 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||||||| |||| ||||| | ||||||||||||| ||||||| ||||||| |||||| Sbjct: 3059 cccgaaaacctaagggttccttcacaaggttcgtccatggagggttagtcaggacctaag 3118 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 || |||||||| ||||||||||| |||||||||| ||||||||||| Sbjct: 3119 gcaagaccgaaaggtgtagtcgatggcaaacaggtcaacattcctgtact 3168
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 30 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 89 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 90 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 148 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 149 gcgtaatagctcactg 164 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagg 35 ||||||| ||||||||||||||||||||||||||| Sbjct: 365154 tgagacggtgggggataagcttcatcgtcgagagg 365188 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Minus Query: 105 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 164 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 gtcgagagggaaacagcccggatc 50 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 196 bits (99), Expect = 5e-47 Identities = 186/215 (86%) Strand = Plus / Plus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 192890 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 192949 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 192950 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 193009 Query: 189 gaacggggctaagcgatctgccgaagctgtgggat 223 ||||||| ||||||| |||||||||||||||||| Sbjct: 193010 gaacgggactaagcggcctgccgaagctgtgggat 193044 Score = 196 bits (99), Expect = 5e-47 Identities = 186/215 (86%) Strand = Plus / Minus Query: 9 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 68 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 69 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 128 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 143892 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 143833 Query: 129 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 188 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 143832 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 143773 Query: 189 gaacggggctaagcgatctgccgaagctgtgggat 223 ||||||| ||||||| |||||||||||||||||| Sbjct: 143772 gaacgggactaagcggcctgccgaagctgtgggat 143738 Score = 188 bits (95), Expect = 1e-44 Identities = 155/175 (88%) Strand = Plus / Plus Query: 282 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 341 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 193107 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 193166 Query: 342 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 401 |||| |||||||||| |||| ||||| ||||||||||||| | ||||||||||||| | Sbjct: 193167 aatgtcccgaaaacctaagggttcctttacaaggttcgtccatgaagggtgagtcaggtc 193226 Query: 402 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 ||||| ||| ||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 193227 ctaaggcgaggtcgaaaggcgtagtcgatggcaaacaggtcaacattcctgtact 193281 Score = 188 bits (95), Expect = 1e-44 Identities = 155/175 (88%) Strand = Plus / Minus Query: 282 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 341 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 143675 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 143616 Query: 342 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 401 |||| |||||||||| |||| ||||| ||||||||||||| | ||||||||||||| | Sbjct: 143615 aatgtcccgaaaacctaagggttcctttacaaggttcgtccatgaagggtgagtcaggtc 143556 Query: 402 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 ||||| ||| ||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 143555 ctaaggcgaggtcgaaaggcgtagtcgatggcaaacaggtcaacattcctgtact 143501
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 196 bits (99), Expect = 5e-47 Identities = 138/151 (91%) Strand = Plus / Plus Query: 307 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 366 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 3449 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcc 3508 Query: 367 tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 426 ||| | ||||||||||| || |||| ||||||| |||||||||||||| || ||||| || Sbjct: 3509 tccactaggttcgtccatggggggttagtcaggacctaagatcaggccaaacggcgtcgt 3568 Query: 427 cgatggacaacaggtcaatattcctgtacta 457 ||||||| ||||||| ||||||||||||||| Sbjct: 3569 cgatggaaaacaggttaatattcctgtacta 3599 Score = 157 bits (79), Expect = 4e-35 Identities = 172/203 (84%) Strand = Plus / Plus Query: 17 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 76 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| | | Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatggtcac 2766 Query: 77 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 136 | |||| ||||||| ||| | ||| | ||| ||||||||||||| ||||||||||||| Sbjct: 2767 taagtggtaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccac 2826 Query: 137 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 196 |||| ||||||||||||||||||||||| | |||| ||||||| || ||| |||| Sbjct: 2827 ccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataatggccggga 2886 Query: 197 ctaagcgatctgccgaagctgtg 219 ||||| || |||||||||||||| Sbjct: 2887 ctaagtgacctgccgaagctgtg 2909
>gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 3371 Score = 196 bits (99), Expect = 5e-47 Identities = 189/219 (86%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 |||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||| |||| Sbjct: 962 tgagactatgggggagaagcttcatagtcgagagggaaacagcccagatcaccagttaag 1021 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||| ||| || ||| |||| |||||||||||| ||| |||||| ||||||||||| Sbjct: 1022 gccccaaaacgatagctaagtggaaaaggaggtgggcatgcgaagacaaccaggaggttt 1081 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 180 ||||||||||||||| |||| ||||||||||||||||||||||| || |||| | |||| Sbjct: 1082 gcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgttcctgcg 1141 Query: 181 ctgaagatgaacggggctaagcgatctgccgaagctgtg 219 | ||| ||||| ||| ||||| |||||||||| ||||| Sbjct: 1142 ccgaaaatgaatgggactaagttatctgccgaaactgtg 1180 Score = 105 bits (53), Expect = 1e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 296 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 355 |||| |||||||||||||||||||||| || |||| |||||| ||||| |||| Sbjct: 1259 gaagtgagaatgtcggcttgagtaacgtaattgaaggtgtgaatccttcaccccggaaac 1318 Query: 356 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 415 |||||| ||||||| | ||| ||||||| ||||||| ||||||| |||||| ||||| Sbjct: 1319 ccaagggttcctcctccaggctcgtccaaggagggttagtcaggtcctaaggcaaggcca 1378 Query: 416 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 456 || ||||||||||||||| |||||||||| ||||||||||| Sbjct: 1379 aacggcgtagtcgatggaaaacaggtcaacattcctgtact 1419
>gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2786 Score = 196 bits (99), Expect = 5e-47 Identities = 153/171 (89%) Strand = Plus / Plus Query: 287 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 346 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1369 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1428 Query: 347 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 406 |||||||||| |||| |||| ||| ||| |||||| ||| |||| ||||||| |||||| Sbjct: 1429 cccgaaaacctaagggttccaccggtagggtcgtccgcggtgggttagtcaggacctaag 1488 Query: 407 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 457 |||||||||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1489 gccaggccgaaaggcgcagtcgatggcaaacaggtgaatattcctgtacta 1539 Score = 145 bits (73), Expect = 2e-31 Identities = 185/221 (83%), Gaps = 1/221 (0%) Strand = Plus / Plus Query: 1 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 60 ||||||||| ||||||||||| |||||| ||||||||||||||| || || |||||||| Sbjct: 1077 tgagacgatcggggataagctcgatcgtcaagagggaaacagcccagaccatcagctaag 1136 Query: 61 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 120 ||||| ||||||| ||| |||| |||||| ||| ||| || ||| ||||||||||| Sbjct: 1137 gccccaaaatgacagctaagtggcaaaggatgtgaaaatgcgaaaacaaccaggaggttt 1196 Query: 121 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgat-cgagcgcccttgc 179 || ||||||||||| |||||||||||||||||||||||||||| | | |||| ||||| Sbjct: 1197 gctcagaagcagccatcctttaaagagtgcgtaatagctcactggtccaagcgttcttgc 1256 Query: 180 gctgaagatgaacggggctaagcgatctgccgaagctgtgg 220 || ||| || | |||| ||||| |||||||||||||||| Sbjct: 1257 gccgaaaattatcgggactaagttgtctgccgaagctgtgg 1297 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,854,591 Number of Sequences: 3902068 Number of extensions: 2854591 Number of successful extensions: 53090 Number of sequences better than 10.0: 2457 Number of HSP's better than 10.0 without gapping: 2487 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 39964 Number of HSP's gapped (non-prelim): 12436 length of query: 506 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 484 effective length of database: 17,147,199,772 effective search space: 8299244689648 effective search space used: 8299244689648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
