ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd24n01 |
|---|---|
| Clone Library Name | barley_pub |
>MCCB_ARATH (Q9LDD8) Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial| precursor (EC 6.4.1.4) (3-Methylcrotonyl-CoA carboxylase 2) (MCCase beta subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase beta subunit) Length = 587 Score = 327 bits (839), Expect = 1e-89 Identities = 163/202 (80%), Positives = 180/202 (89%), Gaps = 3/202 (1%) Frame = +1 Query: 13 AVVLGSCTAGGAYIPAMADESIIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKI 192 A+VLGSCTAGGAYIPAMADES++VKGNGTIFLAGPPLVKAATGEE+SAEDLGGA+VHC + Sbjct: 228 AIVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGATVHCTV 287 Query: 193 SGVSDHFAQDERHGLALGRNIVKNLHLAAK---ETSIHNSACDYQEPLYDVQELRSIAPA 363 SGVSD+FAQDE HGLA+GRNIVKNLH+AAK E + + Y+EPLYD+ ELRSIAP Sbjct: 288 SGVSDYFAQDELHGLAIGRNIVKNLHMAAKQGMEGTFGSKNLVYKEPLYDINELRSIAPV 347 Query: 364 DTKQSFDIRSIIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIGNNGILFTESALK 543 D KQ FD+RSIIARIVDGSEFDEFKK YGTTLVTGFARI GQ VGIIGNNGILF ESALK Sbjct: 348 DHKQQFDVRSIIARIVDGSEFDEFKKQYGTTLVTGFARIYGQTVGIIGNNGILFNESALK 407 Query: 544 GTHFIELCAQRNIPLIFLQNIS 609 G HFIELC+QR IPL+FLQNI+ Sbjct: 408 GAHFIELCSQRKIPLVFLQNIT 429
>PCCB_DROME (Q9V9A7) Putative propionyl-CoA carboxylase beta chain,| mitochondrial precursor (EC 6.4.1.3) (PCCase beta subunit) (Propanoyl-CoA:carbon dioxide ligase beta subunit) Length = 578 Score = 272 bits (695), Expect = 6e-73 Identities = 137/212 (64%), Positives = 164/212 (77%), Gaps = 13/212 (6%) Frame = +1 Query: 13 AVVLGSCTAGGAYIPAMADESIIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKI 192 AVV+GSCTAGGAY+PAMADESIIVK GTIFLAGPPLVKAATGEE+SAEDLGGA +HCK Sbjct: 209 AVVMGSCTAGGAYVPAMADESIIVKKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCKT 268 Query: 193 SGVSDHFAQDERHGLALGRNIVKNLHLAA----KETSIHNSACDYQ---------EPLYD 333 SGV+DH+A D+ H L L R IV NL+L+A + +H+S ++Q EP YD Sbjct: 269 SGVTDHYALDDEHALYLARQIVSNLNLSATNSYNDQLMHSSQVNFQTATPPSAVEEPRYD 328 Query: 334 VQELRSIAPADTKQSFDIRSIIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIGNN 513 +EL I + +SFD+R +IARIVDGS F EFKKLYG TLV GFA++ G VGI+GNN Sbjct: 329 AEELYGIVGPNLTKSFDVREVIARIVDGSRFTEFKKLYGETLVCGFAKLYGHTVGIVGNN 388 Query: 514 GILFTESALKGTHFIELCAQRNIPLIFLQNIS 609 G+LF+ESALKG HFI+LCAQR IPL+FLQNI+ Sbjct: 389 GVLFSESALKGAHFIQLCAQRKIPLVFLQNIT 420
>MCCC2_HUMAN (Q9HCC0) Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial| precursor (EC 6.4.1.4) (3-Methylcrotonyl-CoA carboxylase 2) (MCCase beta subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase beta subunit) (3-Methylcrotonyl-CoA carboxylase n Length = 563 Score = 269 bits (687), Expect = 5e-72 Identities = 134/200 (67%), Positives = 161/200 (80%), Gaps = 1/200 (0%) Frame = +1 Query: 13 AVVLGSCTAGGAYIPAMADESIIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKI 192 AVV+GSCTAGGAY+PAMADE+IIV+ GTIFLAGPPLVKAATGEE+SAEDLGGA +HC+ Sbjct: 210 AVVMGSCTAGGAYVPAMADENIIVRKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRK 269 Query: 193 SGVSDHFAQDERHGLALGRNIVKNLHLAAK-ETSIHNSACDYQEPLYDVQELRSIAPADT 369 SGVSDH+A D+ H L L R +V+NL+ K + +I S +EPL+ EL I A+ Sbjct: 270 SGVSDHWALDDHHALHLTRKVVRNLNYQKKLDVTIEPS----EEPLFPADELYGIVGANL 325 Query: 370 KQSFDIRSIIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIGNNGILFTESALKGT 549 K+SFD+R +IARIVDGS F EFK YG TLVTGFARI G PVGI+GNNG+LF+ESA KGT Sbjct: 326 KRSFDVREVIARIVDGSRFTEFKAFYGDTLVTGFARIFGYPVGIVGNNGVLFSESAKKGT 385 Query: 550 HFIELCAQRNIPLIFLQNIS 609 HF++LC QRNIPL+FLQNI+ Sbjct: 386 HFVQLCCQRNIPLLFLQNIT 405
>YLPC_CAEEL (P34385) Hypothetical protein F02A9.4a in chromosome III| Length = 608 Score = 249 bits (635), Expect = 6e-66 Identities = 120/199 (60%), Positives = 156/199 (78%) Frame = +1 Query: 13 AVVLGSCTAGGAYIPAMADESIIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKI 192 AVV+GSCTAGGAY+PAM+D++IIVKG GT+FL GPPLVKAATGEEISAE+LGGA +HC Sbjct: 255 AVVMGSCTAGGAYVPAMSDQAIIVKGTGTVFLGGPPLVKAATGEEISAEELGGADLHCGE 314 Query: 193 SGVSDHFAQDERHGLALGRNIVKNLHLAAKETSIHNSACDYQEPLYDVQELRSIAPADTK 372 SGV+D++A +++H L L R+ + L + + + +A EPLY +E+ I ++ K Sbjct: 315 SGVTDYYAHNDKHALYLARSCIAGLPPVEEHMTFNPNA---DEPLYPAEEIYGIVGSNLK 371 Query: 373 QSFDIRSIIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIGNNGILFTESALKGTH 552 +++D+R +IARIVDGS F EFK+ YG TLVTGFA I GQ VGI+ NNG+LF ESA+KG+H Sbjct: 372 KTYDVREVIARIVDGSRFHEFKERYGETLVTGFATIYGQRVGILANNGVLFAESAMKGSH 431 Query: 553 FIELCAQRNIPLIFLQNIS 609 FIELC QR IPL+FLQNI+ Sbjct: 432 FIELCCQRKIPLLFLQNIT 450
>12S_PROFR (Q8GBW6) Methylmalonyl-CoA carboxyltransferase 12S subunit (EC| 2.1.3.1) (Transcarboxylase 12S subunit) Length = 610 Score = 125 bits (313), Expect = 1e-28 Identities = 72/206 (34%), Positives = 112/206 (54%), Gaps = 8/206 (3%) Frame = +1 Query: 13 AVVLGSCTAGGAYIPAMADESIIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKI 192 A++ G C G +Y PA+ D I+ K +F+ GP ++K+ TGE+++A++LGGA H I Sbjct: 172 AIIAGPCAGGASYSPALTDFIIMTK-KAHMFITGPQVIKSVTGEDVTADELGGAEAHMAI 230 Query: 193 SGVSDHFAQDERHGLALGRNIVKNLHLAAKETSIHNSACDYQEPLYDVQ---ELRSIAPA 363 SG A+D+ + + ++ L E + + P DV ELR I P Sbjct: 231 SGNIHFVAEDDDAAELIAKKLLSFLPQNNTEEA------SFVNPNNDVSPNTELRDIVPI 284 Query: 364 DTKQSFDIRSIIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIGN-----NGILFT 528 D K+ +D+R +IA+IVD ++ E K Y T LVT FAR+ G+ VGI+ N +G L Sbjct: 285 DGKKGYDVRDVIAKIVDWGDYLEVKAGYATNLVTAFARVNGRSVGIVANQPSVMSGCLDI 344 Query: 529 ESALKGTHFIELCAQRNIPLIFLQNI 606 ++ K F+ C NIPL+ L ++ Sbjct: 345 NASDKAAEFVNFCDSFNIPLVQLVDV 370
>PCCB_HUMAN (P05166) Propionyl-CoA carboxylase beta chain, mitochondrial| precursor (EC 6.4.1.3) (PCCase beta subunit) (Propanoyl-CoA:carbon dioxide ligase beta subunit) Length = 539 Score = 122 bits (305), Expect = 1e-27 Identities = 66/198 (33%), Positives = 111/198 (56%), Gaps = 5/198 (2%) Frame = +1 Query: 13 AVVLGSCTAGGAYIPAMADESIIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKI 192 ++++G C G Y PA+ D + +VK +F+ GP +VK+ T E+++ E+LGGA H + Sbjct: 194 SLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPDVVKSVTNEDVTQEELGGAKTHTTM 253 Query: 193 SGVSDHFAQDERHGLALGRNIVKNLHLAAKETSIHNSACDYQEPLYDVQELRSIAPADTK 372 SGV+ +++ L R+ L L++++ + D + L V EL +I P ++ Sbjct: 254 SGVAHRAFENDVDALCNLRDFFNYLPLSSQDPASVRECHDPSDRL--VPELDTIVPLEST 311 Query: 373 QSFDIRSIIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIGN-----NGILFTESA 537 +++++ II +VD EF E Y ++ GFAR+ G+ VGI+GN +G L S+ Sbjct: 312 KAYNMVDIIHSVVDEREFFEIMPNYAKNIIVGFARMNGRTVGIVGNQPKVASGCLDINSS 371 Query: 538 LKGTHFIELCAQRNIPLI 591 +KG F+ C NIPLI Sbjct: 372 VKGARFVRFCDAFNIPLI 389
>PCCB_MOUSE (Q99MN9) Propionyl-CoA carboxylase beta chain, mitochondrial| precursor (EC 6.4.1.3) (PCCase beta subunit) (Propanoyl-CoA:carbon dioxide ligase beta subunit) Length = 541 Score = 120 bits (302), Expect = 2e-27 Identities = 65/198 (32%), Positives = 108/198 (54%), Gaps = 5/198 (2%) Frame = +1 Query: 13 AVVLGSCTAGGAYIPAMADESIIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKI 192 ++++G C G Y PA+ D + +VK +F+ GP +VK+ T E+++ E LGGA H + Sbjct: 196 SLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPEVVKSVTNEDVTQEQLGGAKTHTTV 255 Query: 193 SGVSDHFAQDERHGLALGRNIVKNLHLAAKETSIHNSACDYQEPLYDVQELRSIAPADTK 372 SGV+ ++ L R L L++++ + D + L V EL ++ P ++ Sbjct: 256 SGVAHRAFDNDVDALCNLREFFNFLPLSSQDPAPIRECHDPSDRL--VPELDTVVPLESS 313 Query: 373 QSFDIRSIIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIGN-----NGILFTESA 537 +++++ II ++D EF E Y +V GFAR+ G+ VGI+GN +G L S+ Sbjct: 314 KAYNMLDIIHAVIDEREFFEIMPSYALNIVVGFARMNGRTVGIVGNQPNVASGCLDINSS 373 Query: 538 LKGTHFIELCAQRNIPLI 591 +KG F+ C NIPLI Sbjct: 374 VKGARFVRFCDAFNIPLI 391
>PCCB_PIG (P79384) Propionyl-CoA carboxylase beta chain, mitochondrial| precursor (EC 6.4.1.3) (PCCase beta subunit) (Propanoyl-CoA:carbon dioxide ligase beta subunit) Length = 539 Score = 119 bits (299), Expect = 5e-27 Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 5/198 (2%) Frame = +1 Query: 13 AVVLGSCTAGGAYIPAMADESIIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKI 192 ++++G C G Y PA+ D + +VK +F+ GP +VK+ T E+++ E+LGGA H + Sbjct: 194 SLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPDVVKSVTNEDVTQEELGGARTHTTM 253 Query: 193 SGVSDHFAQDERHGLALGRNIVKNLHLAAKETSIHNSACDYQEPLYDVQELRSIAPADTK 372 SGV+ ++ L R L L+ ++ + D + L V EL ++ P ++ Sbjct: 254 SGVAHRAFDNDVDALCNLREFFNYLPLSNQDPAPIRECHDPSDRL--VPELDTVVPLEST 311 Query: 373 QSFDIRSIIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIGN-----NGILFTESA 537 +++D+ II IVD +F E Y ++ GFAR+ G+ VGI+GN +G L S+ Sbjct: 312 RAYDMVDIIYSIVDERDFFEIMPNYAKNIIVGFARMNGRTVGIVGNQPKVASGCLDINSS 371 Query: 538 LKGTHFIELCAQRNIPLI 591 +KG F+ C NIPLI Sbjct: 372 VKGARFVRFCDAFNIPLI 389
>PCCB_RHOER (Q06101) Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) (PCCase)| (Propanoyl-CoA:carbon dioxide ligase) Length = 476 Score = 118 bits (295), Expect = 2e-26 Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 8/206 (3%) Frame = +1 Query: 13 AVVLGSCTAGGAYIPAMADESIIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKI 192 +VVLG G AY PA+ D +I+ G +F+ GP +V++ TGE++ LGG H K Sbjct: 130 SVVLGFAAGGAAYGPALTDV-VIMAPEGRVFVTGPDVVRSVTGEQVDMVSLGGPDTHTKK 188 Query: 193 SGVSDHFAQDERHGLALGRNIVKNLHLAAKETSIHNSACDYQEPLYDVQELRSIAPADTK 372 SGV+ A DE L R +V + ++ A + + +LR++ PA K Sbjct: 189 SGVAHIAAHDEADALHRARRLVS---MMCEQGEFDQRAAELGD-----SDLRAMMPASAK 240 Query: 373 QSFDIRSIIARIVDG----SEFDEFKKLYGTTLVTGFARICGQPVGIIGNN----GILFT 528 +++D+R I+ ++D S F+E + Y ++VTGF R+ G+ VG+I NN G L + Sbjct: 241 RAYDVRPIVHEMLDNVEGESSFEELQGNYARSIVTGFGRMAGRTVGVIANNPLRLGCLNS 300 Query: 529 ESALKGTHFIELCAQRNIPLIFLQNI 606 ESA K F+ LC +PL+ + ++ Sbjct: 301 ESAEKAARFVRLCNAFGVPLVVVVDV 326
>PCCB_RAT (P07633) Propionyl-CoA carboxylase beta chain, mitochondrial| precursor (EC 6.4.1.3) (PCCase beta subunit) (Propanoyl-CoA:carbon dioxide ligase beta subunit) Length = 541 Score = 117 bits (294), Expect = 2e-26 Identities = 64/198 (32%), Positives = 107/198 (54%), Gaps = 5/198 (2%) Frame = +1 Query: 13 AVVLGSCTAGGAYIPAMADESIIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKI 192 ++++G C G Y PA+ D + +VK +F+ GP VK+ T E+++ E LGGA H + Sbjct: 196 SLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPEFVKSVTNEDVTQEQLGGAKTHTTV 255 Query: 193 SGVSDHFAQDERHGLALGRNIVKNLHLAAKETSIHNSACDYQEPLYDVQELRSIAPADTK 372 SGV+ ++ L R + L L+ ++ + D + L V EL ++ P ++ Sbjct: 256 SGVAHRAFDNDVDALCNLREFLNFLPLSNQDPASIRECHDPSDRL--VPELDTVVPLESS 313 Query: 373 QSFDIRSIIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIGN-----NGILFTESA 537 +++++ II ++D EF E Y +V GFAR+ G+ VGI+GN +G L S+ Sbjct: 314 KAYNMLDIIHAVIDEREFFEIMPNYAKNIVIGFARMNGRTVGIVGNQPNVASGCLDINSS 373 Query: 538 LKGTHFIELCAQRNIPLI 591 +KG F+ C +IPLI Sbjct: 374 VKGARFVRFCDAFSIPLI 391
>PCCB_SACER (P53003) Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) (PCCase)| (Propanoyl-CoA:carbon dioxide ligase) Length = 546 Score = 110 bits (276), Expect = 2e-24 Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 11/209 (5%) Frame = +1 Query: 13 AVVLGSCTAGGAYIPAMADESIIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKI 192 ++++G C G Y PA+ D +++V +F+ GP ++K TGE++S EDLGGA H + Sbjct: 181 SLIMGPCAGGAVYSPAITDFTVMVDQTSHMFITGPDVIKTVTGEDVSFEDLGGARTHNER 240 Query: 193 SGVSDHFAQDERHGLALGRNIVKNLHLAAKETSIHNSACDYQE-----PLYDVQ-ELRSI 354 SG + + A DE ++ + ++ L +S + +E + D EL ++ Sbjct: 241 SGNAHYLATDEDDAISYVKELLSFLPSNNLSSSPVFPGAEVEEGSVADGVGDADLELDAL 300 Query: 355 APADTKQSFDIRSIIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIGNN-----GI 519 P Q +D+R +I R+VD EF E L+ ++ GF RI G VG++ N G Sbjct: 301 VPDSPNQPYDMREVITRLVDEGEFLEVSALFAPNMLCGFGRIEGASVGVVANQPMQLAGT 360 Query: 520 LFTESALKGTHFIELCAQRNIPLIFLQNI 606 L +++ K F+ C NIP++ L ++ Sbjct: 361 LDIDASEKAARFVRFCDAFNIPVLTLVDV 389
>PCCB_BACSU (P54541) Putative propionyl-CoA carboxylase beta chain (EC 6.4.1.3)| (PCCase) (Propanoyl-CoA:carbon dioxide ligase) Length = 506 Score = 110 bits (275), Expect = 3e-24 Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 5/203 (2%) Frame = +1 Query: 13 AVVLGSCTAGGAYIPAMADESIIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKI 192 +V+LG C G Y PA+ D + + G +F+ GP +++ TGE++ AE LGGA +H + Sbjct: 157 SVILGPCAGGAVYSPALTDFIFMAEQTGRMFITGPKVIEKVTGEQVDAESLGGAGIHNAV 216 Query: 193 SGVSDHFAQDERHGLALGRNIVKNLHLAAKETSIHNSACDYQEPLYDVQELRSIAPADTK 372 SG + E+ L R ++ L L + T + PL L + PADT Sbjct: 217 SGNAHFSGHTEKEVLTGVRKLLSYLPLNGRTTE-PKPEKEASRPL-----LNRLVPADTT 270 Query: 373 QSFDIRSIIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIGNN-----GILFTESA 537 + +D+R +I + D F E + + +V GFAR+ + +GI+ + G L ++A Sbjct: 271 KPYDVRKVIRELADPQSFFEIQPFFAKNIVIGFARLGEKAIGIVASQPKHLAGSLTIDAA 330 Query: 538 LKGTHFIELCAQRNIPLIFLQNI 606 K FI C +IPL+ ++++ Sbjct: 331 DKAARFIRFCDAFDIPLLTVEDV 353
>PCC6_MYCTU (P63407) Probable propionyl-CoA carboxylase beta chain 6 (EC| 6.4.1.3) (PCCase) (Propanoyl-CoA:carbon dioxide ligase) Length = 473 Score = 105 bits (262), Expect = 1e-22 Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 6/204 (2%) Frame = +1 Query: 13 AVVLGSCTAGGAYIPAMADESIIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKI 192 +VV+G G AY PA+ D +++ +F+ GP +V++ TGE++ LGG H K Sbjct: 129 SVVVGFAAGGAAYGPALTDV-VVMAPESRVFVTGPDVVRSVTGEDVDMASLGGPETHHKK 187 Query: 193 SGVSDHFAQDERHGLALGRNIVKNLHLAAKETSIHNSACDYQEPLYDVQELRSIAPADTK 372 SGV A DE GR +V L ++ S + + ++ ++ P ++ Sbjct: 188 SGVCHIVADDELDAYDRGRRLV---GLFCQQGHFDRSKAEAGD-----TDIHALLPESSR 239 Query: 373 QSFDIRSIIARIVDG-SEFDEFKKLYGTTLVTGFARICGQPVGIIGNN-----GILFTES 534 +++D+R I+ I+D + FDEF+ + ++V G R+ G+ VG++ NN G L +ES Sbjct: 240 RAYDVRPIVTAILDADTPFDEFQANWAPSMVVGLGRLSGRTVGVLANNPLRLGGCLNSES 299 Query: 535 ALKGTHFIELCAQRNIPLIFLQNI 606 A K F+ LC IPL+ + ++ Sbjct: 300 AEKAARFVRLCDAFGIPLVVVVDV 323
>PCC6_MYCBO (P63408) Probable propionyl-CoA carboxylase beta chain 6 (EC| 6.4.1.3) (PCCase) (Propanoyl-CoA:carbon dioxide ligase) Length = 473 Score = 105 bits (262), Expect = 1e-22 Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 6/204 (2%) Frame = +1 Query: 13 AVVLGSCTAGGAYIPAMADESIIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKI 192 +VV+G G AY PA+ D +++ +F+ GP +V++ TGE++ LGG H K Sbjct: 129 SVVVGFAAGGAAYGPALTDV-VVMAPESRVFVTGPDVVRSVTGEDVDMASLGGPETHHKK 187 Query: 193 SGVSDHFAQDERHGLALGRNIVKNLHLAAKETSIHNSACDYQEPLYDVQELRSIAPADTK 372 SGV A DE GR +V L ++ S + + ++ ++ P ++ Sbjct: 188 SGVCHIVADDELDAYDRGRRLV---GLFCQQGHFDRSKAEAGD-----TDIHALLPESSR 239 Query: 373 QSFDIRSIIARIVDG-SEFDEFKKLYGTTLVTGFARICGQPVGIIGNN-----GILFTES 534 +++D+R I+ I+D + FDEF+ + ++V G R+ G+ VG++ NN G L +ES Sbjct: 240 RAYDVRPIVTAILDADTPFDEFQANWAPSMVVGLGRLSGRTVGVLANNPLRLGGCLNSES 299 Query: 535 ALKGTHFIELCAQRNIPLIFLQNI 606 A K F+ LC IPL+ + ++ Sbjct: 300 AEKAARFVRLCDAFGIPLVVVVDV 323
>PCC5_MYCTU (P96885) Probable propionyl-CoA carboxylase beta chain 5 (EC| 6.4.1.3) (PCCase) (Propanoyl-CoA:carbon dioxide ligase) Length = 548 Score = 104 bits (259), Expect = 2e-22 Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 10/208 (4%) Frame = +1 Query: 13 AVVLGSCTAGGAYIPAMADESIIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKI 192 ++++G+ G Y PA+ D I+V +F+ GP ++K TGEE++ E+LGGA H Sbjct: 185 SLIMGAAAGGHVYSPALTDFVIMVDQTSQMFITGPDVIKTVTGEEVTMEELGGAHTHMAK 244 Query: 193 SGVSDHFAQDERHGLALGRNIVK----NLHLAAKETSIHNSACDYQEPLYDVQ-ELRSIA 357 SG + + A E+ R ++ N A +E L D EL ++ Sbjct: 245 SGTAHYAASGEQDAFDYVRELLSYLPPNNSTDAPRYQAAAPTGPIEENLTDEDLELDTLI 304 Query: 358 PADTKQSFDIRSIIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIGNN-----GIL 522 P Q +D+ +I R++D EF E + Y +V GF RI G+PVGI+ N G L Sbjct: 305 PDSPNQPYDMHEVITRLLD-DEFLEIQAGYAQNIVVGFGRIDGRPVGIVANQPTHFAGCL 363 Query: 523 FTESALKGTHFIELCAQRNIPLIFLQNI 606 ++ K F+ C NIP++ L ++ Sbjct: 364 DINASEKAARFVRTCDCFNIPIVMLVDV 391
>PCCB_MYCLE (P53002) Probable propionyl-CoA carboxylase beta chain 5 (EC| 6.4.1.3) (PCCase) (Propanoyl-CoA:carbon dioxide ligase) Length = 549 Score = 103 bits (258), Expect = 3e-22 Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 15/213 (7%) Frame = +1 Query: 13 AVVLGSCTAGGAYIPAMADESIIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKI 192 ++++G+ G Y PA+ D ++V +F+ GP ++K TGE+++ E+LGGA H Sbjct: 185 SLIMGAAAGGHVYSPALTDFVVMVDQTSQMFITGPDVIKTVTGEDVTMEELGGAHTHMAK 244 Query: 193 SGVSDHFAQDERHGLALGRNIVKNLHLAAKETSIHNSACDYQEPLYDVQ----------E 342 SG + + A E+ R+++ L ++ A Y +P+ E Sbjct: 245 SGTAHYVASGEQDAFDWVRDVLSYL-----PSNNFTDAPRYSKPVPHGSIEDNLTAKDLE 299 Query: 343 LRSIAPADTKQSFDIRSIIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIGNNGIL 522 L ++ P Q +D+ ++ R++D EF E + Y T +V G RI +PVGI+ N I Sbjct: 300 LDTLIPDSPNQPYDMHEVVTRLLDEEEFLEVQAGYATNIVVGLGRIDDRPVGIVANQPIQ 359 Query: 523 FT-----ESALKGTHFIELCAQRNIPLIFLQNI 606 F ++ K F+ +C NIP++ L ++ Sbjct: 360 FAGCLDINASEKAARFVRVCDCFNIPIVMLVDV 392
>GCDA_ACIFE (Q06700) Glutaconyl-CoA decarboxylase alpha subunit (EC 4.1.1.70)| (Carboxyltransferase) Length = 587 Score = 72.8 bits (177), Expect = 7e-13 Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 19/117 (16%) Frame = +1 Query: 310 DYQEPLYDVQELRSIAPADTKQSFDIRSIIARIVDGSEFDEFKKLYGTTLVTGFARICGQ 489 D + P + +L S+ P + K+++DI ++IAR+ D SE E+KK YG +VTG A++ G Sbjct: 298 DPKAPAFPADDLYSMVPLNDKRAYDIYNVIARLFDNSELHEYKKGYGPEMVTGLAKVNGL 357 Query: 490 PVGIIGN-------------------NGILFTESALKGTHFIELCAQRNIPLIFLQN 603 VG++ N G L+ + +K F+ LCA+ +P++++Q+ Sbjct: 358 LVGVVANVQGLLMNYPEYKAAGSVGIGGKLYRQGLVKMNEFVTLCARDRLPIVWIQD 414
>COA2_HUMAN (O00763) Acetyl-CoA carboxylase 2 (EC 6.4.1.2) (ACC-beta) [Includes:| Biotin carboxylase (EC 6.3.4.14)] Length = 2483 Score = 36.2 bits (82), Expect = 0.077 Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 10/164 (6%) Frame = +1 Query: 43 GAYIPAMADESIIVKGNGTIFLAGPPLVKAATGEEI--SAEDLGGASVHCKISGVSDHFA 216 GAY+ + I V+ N I L G + G E+ S LGG + +GVS Sbjct: 1964 GAYLVRLGQRVIQVE-NSHIILTGASALNKVLGREVYTSNNQLGGVQI-MHYNGVSHITV 2021 Query: 217 QDERHGLALGRNIVKNLHLAAKETSIHNSACDYQEPL-YDVQELRSIAPADTKQSFDIR- 390 D+ G+ I++ L K+ +P+ +++ L S AP D + R Sbjct: 2022 PDDFEGVY---TILEWLSYMPKDNHSPVPIITPTDPIDREIEFLPSRAPYDPRWMLAGRP 2078 Query: 391 ------SIIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGII 504 + + D F E + T+VTG AR+ G PVG+I Sbjct: 2079 HPTLKGTWQSGFFDHGSFKEIMAPWAQTVVTGRARLGGIPVGVI 2122
>COAC_YEAST (Q00955) Acetyl-CoA carboxylase (EC 6.4.1.2) (ACC) [Includes: Biotin| carboxylase (EC 6.3.4.14)] Length = 2233 Score = 35.4 bits (80), Expect = 0.13 Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 15/170 (8%) Frame = +1 Query: 43 GAYIPAMADESIIVKGNGTIFLAGPPLVKAATGEEISAEDL--GGASVHCKISGVSDHFA 216 GAY+ + +I V+G I L G P + G E+ +L GG + +GVS A Sbjct: 1736 GAYLVRLGQRAIQVEGQ-PIILTGAPAINKMLGREVYTSNLQLGGTQIMYN-NGVSHLTA 1793 Query: 217 QDERHGLALGRNIV---------KNLHLAAKETS-IHNSACDY---QEPLYDVQELRSIA 357 D+ G+ IV +N+ + ET + D+ + YDV+ + I Sbjct: 1794 VDDLAGV---EKIVEWMSYVPAKRNMPVPILETKDTWDRPVDFTPTNDETYDVRWM--IE 1848 Query: 358 PADTKQSFDIRSIIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIG 507 +T+ F+ + D F E + +V G AR+ G P+G+IG Sbjct: 1849 GRETESGFEYG-----LFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIG 1893
>COAC_SCHPO (P78820) Acetyl-CoA carboxylase (EC 6.4.1.2) (ACC) (Cell untimely| torn protein 6) [Includes: Biotin carboxylase (EC 6.3.4.14)] Length = 2280 Score = 35.4 bits (80), Expect = 0.13 Identities = 38/166 (22%), Positives = 69/166 (41%), Gaps = 12/166 (7%) Frame = +1 Query: 43 GAYIPAMADESIIVKGNGTIFLAGPPLVKAATGEEISAEDL--GGASVHCKISGVSDHFA 216 GAY+ + ++ ++G I L G P + G E+ +L GG V + +G+S + Sbjct: 1777 GAYLVRLGQRAVQIEGQ-PIILTGAPALNKVLGREVYTSNLQLGGTQVMHR-NGISHLTS 1834 Query: 217 QDERHGLALGRNIVKNLHLAAKETSIHNSACDYQEPLYDVQELRSIAPADTKQSFDIRSI 396 QD+ G++ N + + + + D + R + ++ +D R + Sbjct: 1835 QDDFDGISKIVNWISYIPDKRNNPVPISPSSDTWD--------RDVEFYPSQNGYDPRWL 1886 Query: 397 IA----------RIVDGSEFDEFKKLYGTTLVTGFARICGQPVGII 504 IA + D F E + T+V G AR+ G P G+I Sbjct: 1887 IAGKEDEDSFLYGLFDKGSFQETLNGWAKTVVVGRARMGGIPTGVI 1932
>OPSP_PETMA (O42490) Pineal opsin (P-opsin) (Pineal gland-specific opsin)| Length = 444 Score = 32.3 bits (72), Expect = 1.1 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = -1 Query: 551 WVPFSADSVNKMPLFPIIPTGCPHILAKPVTSVVPYNFLNSSNSLPSTIRAIIERISKDC 372 W+P++ F I+ T CP I P+ + VP F ++ I + + +DC Sbjct: 273 WMPYAT--------FSIVVTACPTIHLDPLLAAVPAFFSKTATVYNPVIYIFMNKQFRDC 324 Query: 371 FV 366 FV Sbjct: 325 FV 326
>ARNT_ERWCT (Q6D2F3) Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose| arabinosyl transferase (EC 2.-.-.-) (Undecaprenyl phosphate-alpha-L-Ara4N transferase) (4-amino-4-deoxy-L-arabinose lipid A transferase) Length = 556 Score = 31.2 bits (69), Expect = 2.5 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = -1 Query: 551 WVPFSADSVNKMPLFPIIPTGCPHILAKPVTSVVPYNFLNSSN 423 W+ F+A S+ K + + GCP LA V +P + ++S N Sbjct: 396 WIAFAAVSLRKQQTWGYLVAGCPLFLALLVGGSIPASVVDSKN 438
>ACCA_SALTY (P0A1C3) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 318 Score = 30.8 bits (68), Expect = 3.3 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 20/76 (26%) Frame = +1 Query: 424 FDEFKKLYGT-------TLVTGFARICGQPVGIIG-------------NNGILFTESALK 543 FDEF +L G +V G AR+ G+PV IIG N G+ E K Sbjct: 82 FDEFDELAGDRAYADDKAIVGGIARLEGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRK 141 Query: 544 GTHFIELCAQRNIPLI 591 +E+ + N+P+I Sbjct: 142 ALRLMEMAERFNMPII 157
>ACCA_SALTI (P0A1C4) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 318 Score = 30.8 bits (68), Expect = 3.3 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 20/76 (26%) Frame = +1 Query: 424 FDEFKKLYGT-------TLVTGFARICGQPVGIIG-------------NNGILFTESALK 543 FDEF +L G +V G AR+ G+PV IIG N G+ E K Sbjct: 82 FDEFDELAGDRAYADDKAIVGGIARLEGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRK 141 Query: 544 GTHFIELCAQRNIPLI 591 +E+ + N+P+I Sbjct: 142 ALRLMEMAERFNMPII 157
>ACCA_SALPA (Q5PD69) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 319 Score = 30.8 bits (68), Expect = 3.3 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 20/76 (26%) Frame = +1 Query: 424 FDEFKKLYGT-------TLVTGFARICGQPVGIIG-------------NNGILFTESALK 543 FDEF +L G +V G AR+ G+PV IIG N G+ E K Sbjct: 83 FDEFDELAGDRAYADDKAIVGGIARLEGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRK 142 Query: 544 GTHFIELCAQRNIPLI 591 +E+ + N+P+I Sbjct: 143 ALRLMEMAERFNMPII 158
>ACCA_SALCH (Q57T23) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 319 Score = 30.8 bits (68), Expect = 3.3 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 20/76 (26%) Frame = +1 Query: 424 FDEFKKLYGT-------TLVTGFARICGQPVGIIG-------------NNGILFTESALK 543 FDEF +L G +V G AR+ G+PV IIG N G+ E K Sbjct: 83 FDEFDELAGDRAYADDKAIVGGIARLEGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRK 142 Query: 544 GTHFIELCAQRNIPLI 591 +E+ + N+P+I Sbjct: 143 ALRLMEMAERFNMPII 158
>METK_ZYMMO (Q5NQV7) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 391 Score = 30.4 bits (67), Expect = 4.2 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 3/90 (3%) Frame = +1 Query: 67 DESIIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKISGVSDHFAQDERHGLALG 246 D++I V G + GP TG +I + GGA+ H + + +R + Sbjct: 225 DKAIFVNPTGLFEIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYVA 284 Query: 247 RNIVKNLHLA--AKETSIHNS-ACDYQEPL 327 R + KN+ A AK+ +I S A EPL Sbjct: 285 RYLAKNIVAAGLAKKVTIQLSYAIGVSEPL 314
>ACCA_RHILO (Q98FX7) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 316 Score = 30.4 bits (67), Expect = 4.2 Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 20/78 (25%) Frame = +1 Query: 424 FDEFKKLYGT-------TLVTGFARICGQPVGIIG-------------NNGILFTESALK 543 F +F L G +V GFAR G+PV IIG N G + E K Sbjct: 80 FSDFTPLAGDRNFGEDQAIVGGFARFRGEPVAIIGQEKGSDTTSRLRHNFGSVRPEGYRK 139 Query: 544 GTHFIELCAQRNIPLIFL 597 +EL + IPL+ L Sbjct: 140 AVRLMELADRFKIPLLTL 157
>FABPH_SPETR (Q99P61) Fatty acid-binding protein, heart (H-FABP) (Heart-type| fatty acid-binding protein) Length = 132 Score = 30.0 bits (66), Expect = 5.6 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Frame = +1 Query: 403 RIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIGNNG---ILFTESALKGT 549 ++VD FD++ K G T +P II NG IL T+S K T Sbjct: 9 KLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDTIILKTQSTFKNT 60
>METK_MYCPU (Q98PM0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 376 Score = 30.0 bits (66), Expect = 5.6 Identities = 20/67 (29%), Positives = 32/67 (47%) Frame = +1 Query: 82 VKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKISGVSDHFAQDERHGLALGRNIVK 261 + NG+ + GP TG +I + GGA+ H + + + +R + R I K Sbjct: 217 INPNGSFSIGGPIGDTGLTGRKIIVDTYGGAAHHGGGAFSGKDYTKVDRSAAYMARYIAK 276 Query: 262 NLHLAAK 282 NL +AAK Sbjct: 277 NL-VAAK 282
>TRY1_RAT (P00762) Anionic trypsin-1 precursor (EC 3.4.21.4) (Anionic trypsin| I) (Pretrypsinogen I) Length = 246 Score = 29.6 bits (65), Expect = 7.2 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -1 Query: 230 WRSSCAK*SETPDILQCTDAPPRSSAD 150 W ++ + PD+LQC DAP S AD Sbjct: 144 WGNTLSNGVNNPDLLQCVDAPVLSQAD 170
>AMPA_DESPS (Q6AJZ3) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) Length = 502 Score = 29.6 bits (65), Expect = 7.2 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = +1 Query: 49 YIPAMADESIIVKGNGTIFLAGPPLVKAATG-EEISAEDLGGASVHCKISGVSD 207 Y P +++++ G G F +G +K G EE+ + GGA+V C + V++ Sbjct: 256 YSPENPRKTVLMVGKGLTFDSGGVSLKPGAGMEEMKYDMCGGAAVICAMKAVAE 309
>SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory element-binding| protein) (NRE-binding protein) (DBP-5) (Bax antagonist selected in saccharomyces 1) (BASS1) Length = 2426 Score = 29.6 bits (65), Expect = 7.2 Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 8/118 (6%) Frame = +1 Query: 124 VKAATGEEISAEDLGGASVHCKISGVSDHFAQ-------DERHGLALGRNIVKNLHLAAK 282 + ++G++ A ++G + SG H + + HG+ + NI N HL AK Sbjct: 1487 INLSSGDQNLAPEIGMQEIALH-SGEEPHAEEHLKGDFYESEHGINIDLNI--NNHLIAK 1543 Query: 283 ETSIHNSACDY-QEPLYDVQELRSIAPADTKQSFDIRSIIARIVDGSEFDEFKKLYGT 453 E HN+ C P+ ++ E + + ++TKQ R+++ SE D + L T Sbjct: 1544 EME-HNTVCAAGTSPVGEIGEEKILPTSETKQ----RTVLDTYPGVSEADAGETLSST 1596
>AMPL_BOVIN (P00727) Cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) (Proline aminopeptidase) (EC 3.4.11.5) (Prolyl aminopeptidase) Length = 487 Score = 29.6 bits (65), Expect = 7.2 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = +1 Query: 55 PAMADESIIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHC 186 P ++ ++ G G F +G +KAA ++ D+GGA+ C Sbjct: 238 PNASEPPLVFVGKGITFDSGGISIKAAANMDLMRADMGGAATIC 281
>TREF1_HUMAN (Q96PN7) Transcriptional-regulating factor 1| (Transcriptional-regulating protein 132) (Zinc finger transcription factor TReP-132) (Zinc finger protein rapa) Length = 1200 Score = 29.3 bits (64), Expect = 9.5 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Frame = +1 Query: 79 IVKGNGTIFLAGPPL-VKAATGEEISAEDLGGASVHCKISGVSDHFAQDERHGLAL 243 + G+ +F PPL V + GG + S +S HF QD R GL L Sbjct: 12 VAHGSENLFYQQPPLGVHSGLNHNYGNAVTGGGMDAPQASPISPHFPQDTRDGLGL 67
>METK_FRATT (Q5NIC7) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 386 Score = 29.3 bits (64), Expect = 9.5 Identities = 18/67 (26%), Positives = 29/67 (43%) Frame = +1 Query: 67 DESIIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKISGVSDHFAQDERHGLALG 246 D + G + GP TG +I + GGA+ H + ++ +R G +G Sbjct: 221 DTKYHINPTGVFLIGGPQGDCGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSGAYMG 280 Query: 247 RNIVKNL 267 R I KN+ Sbjct: 281 RYIAKNI 287
>ACKA_SYNY3 (P73162) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 413 Score = 29.3 bits (64), Expect = 9.5 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -2 Query: 601 FEGISKEYCVEHTTQ*SGYPLVPTR*IKCH 512 F G S +YC + T + G PL + I CH Sbjct: 187 FHGTSHKYCAQKTAEILGKPLADLKLITCH 216
>FABPE_HUMAN (Q01469) Fatty acid-binding protein, epidermal (E-FABP)| (Psoriasis-associated fatty acid-binding protein homolog) (PA-FABP) Length = 134 Score = 29.3 bits (64), Expect = 9.5 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Frame = +1 Query: 403 RIVDGSEFDEFKKLYGTTLVTGFARICGQPVGII---GNNGILFTESALKGTHF 555 R+VD FDE+ K G + +P II G N + TES LK T F Sbjct: 11 RLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTLKTTQF 64 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,633,732 Number of Sequences: 219361 Number of extensions: 1922227 Number of successful extensions: 5235 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 5014 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5207 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
