ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd24m17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY578795.1| Anopheles gambiae Gbb-60A2 gene, complete cds 42 2.1
2ref|NG_004620.1| Rattus norvegicus tenascin X pseudogene (Tnx) o... 42 2.1
3ref|XM_541588.2| PREDICTED: Canis familiaris similar to Multiple... 42 2.1
4emb|BX883044.1| Rattus norvegicus chromosome 20, major histocomp... 42 2.1
5gb|AC023781.5| Homo sapiens chromosome 8, clone RP11-149P24, com... 42 2.1
6gb|AC092630.3| Homo sapiens BAC clone RP11-321C18 from 2, comple... 42 2.1
7ref|XM_320599.2| Anopheles gambiae str. PEST ENSANGP00000010678 ... 42 2.1
8gb|AC103673.8| Mus musculus chromosome 1, clone RP24-336F10, com... 40 8.2
9gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 8.2
10gb|AC148870.2| Chlamydomonas reinhardtii clone cr-13O11, complet... 40 8.2
11gb|AC168148.15| Medicago truncatula clone mth2-80b11, complete s... 40 8.2
12gb|AY539750.1| Medicago truncatula NIP2 (NIP2) mRNA, complete cds 40 8.2
13gb|AC123984.14| Mus musculus chromosome 8, clone RP23-78H21, com... 40 8.2
14ref|XM_923431.2| PREDICTED: Mus musculus phosphoinositide-3-kina... 40 8.2
15ref|XM_001001586.1| PREDICTED: Mus musculus phosphoinositide-3-k... 40 8.2
16gb|AC137948.12| Mus musculus chromosome 1, clone RP23-393D20, co... 40 8.2
17emb|Z83234.2|CEK09E4 Caenorhabditis elegans Cosmid K09E4, comple... 40 8.2
18gb|AC107842.13| Mus musculus chromosome 1, clone RP23-304O9, com... 40 8.2
19gb|AC119851.9| Mus musculus chromosome 7, clone RP23-106N20, com... 40 8.2
20gb|AF040646.2| Caenorhabditis elegans fosmid H17B01, complete se... 40 8.2
21emb|AL356579.24| Human DNA sequence from clone RP11-593A16 on ch... 40 8.2
22emb|AL683828.8| Mouse DNA sequence from clone RP23-340H1 on chro... 40 8.2
23gb|AC136964.2| Sus scrofa domestica clone RP44-154L9, complete s... 40 8.2
24gb|AF515053.1| Pongo pygmaeus forkhead box P2 (FOXP2) gene, exon... 40 8.2
25emb|AL928624.4| Mouse DNA sequence from clone RP23-454E10 on chr... 40 8.2
26gb|AC153460.22| Medicago truncatula clone mth2-76i7, complete se... 40 8.2
27gb|AC112719.4| Homo sapiens BAC clone RP11-630D6 from 4, complet... 40 8.2
28gb|AC172371.3| Gallus gallus BAC clone CH261-20I24 from chromoso... 40 8.2
29dbj|AK165803.1| Mus musculus 8 days neonate male testis cDNA, RI... 40 8.2
30ref|XM_678050.1| PREDICTED: Danio rerio similar to RIKEN cDNA D1... 40 8.2
31ref|NM_061577.1| Caenorhabditis elegans H17B01.2 (collagen) mRNA... 40 8.2
32ref|NM_064548.2| Caenorhabditis elegans K09E4.3 (K09E4.3) mRNA, ... 40 8.2
33gb|AC004863.5|AC004863 Homo sapiens PAC clone RP4-708P22 from 7,... 40 8.2
34dbj|AB186038.1| Ascaris suum Ascec-3 gene for cecropin P3, compl... 40 8.2
35dbj|AB186034.1| Ascaris suum Ascec-3 mRNA for cecropin P3, compl... 40 8.2
36dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
37dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
38gb|AC022108.4|AC022108 Homo sapiens chromosome 5 clone CTC-426B1... 40 8.2
39gb|AC097454.2| Homo sapiens BAC clone RP11-2F17 from 4, complete... 40 8.2
40gb|AC012611.6|AC012611 Homo sapiens chromosome 5 clone CTC-554K7... 40 8.2
41dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
42gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.2
43emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial se... 40 8.2
44gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 40 8.2
45dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 8.2
46emb|BX294368.7| Zebrafish DNA sequence from clone CH211-244N12 i... 40 8.2 
>gb|AY578795.1| Anopheles gambiae Gbb-60A2 gene, complete cds
          Length = 1421

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 141 ccgtttccgccgccggccacc 161
           |||||||||||||||||||||
Sbjct: 392 ccgtttccgccgccggccacc 372
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>ref|NG_004620.1| Rattus norvegicus tenascin X pseudogene (Tnx) on chromosome 20
          Length = 44507

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 7    cccccaccgcccccagctgcc 27
            |||||||||||||||||||||
Sbjct: 6404 cccccaccgcccccagctgcc 6424
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>ref|XM_541588.2| PREDICTED: Canis familiaris similar to Multiple EGF-like-domain
            protein 4 (LOC484474), mRNA
          Length = 8370

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 116  gcctcctctgccgcaaccaca 136
            |||||||||||||||||||||
Sbjct: 6641 gcctcctctgccgcaaccaca 6661
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>emb|BX883044.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
              assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
              RT1n haplotype; segment 3/11
          Length = 340493

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 7      cccccaccgcccccagctgcc 27
              |||||||||||||||||||||
Sbjct: 290674 cccccaccgcccccagctgcc 290694
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>gb|AC023781.5| Homo sapiens chromosome 8, clone RP11-149P24, complete sequence
          Length = 147607

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 358   tttgcacatttttgttaatac 378
             |||||||||||||||||||||
Sbjct: 51346 tttgcacatttttgttaatac 51326
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>gb|AC092630.3| Homo sapiens BAC clone RP11-321C18 from 2, complete sequence
          Length = 185947

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 356    catttgcacatttttgttaat 376
              |||||||||||||||||||||
Sbjct: 172880 catttgcacatttttgttaat 172900
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>ref|XM_320599.2| Anopheles gambiae str. PEST ENSANGP00000010678
           (ENSANGG00000008189), partial mRNA
          Length = 1257

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 141 ccgtttccgccgccggccacc 161
           |||||||||||||||||||||
Sbjct: 228 ccgtttccgccgccggccacc 208
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>gb|AC103673.8| Mus musculus chromosome 1, clone RP24-336F10, complete sequence
          Length = 187158

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 513   acttctgaagctgcatgaca 532
             ||||||||||||||||||||
Sbjct: 52168 acttctgaagctgcatgaca 52187
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 367     ttttgttaatacatgccagcttgg 390
               ||||||||||| ||||||||||||
Sbjct: 2107657 ttttgttaataaatgccagcttgg 2107680
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>gb|AC148870.2| Chlamydomonas reinhardtii clone cr-13O11, complete sequence
          Length = 56858

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    cccgccacccgcttcaacct 95
             ||||||||||||||||||||
Sbjct: 35620 cccgccacccgcttcaacct 35601
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>gb|AC168148.15| Medicago truncatula clone mth2-80b11, complete sequence
          Length = 111889

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 53    aacccatccaccagccacagctcc 76
             ||||||| ||||||||||||||||
Sbjct: 43234 aacccatgcaccagccacagctcc 43257
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>gb|AY539750.1| Medicago truncatula NIP2 (NIP2) mRNA, complete cds
          Length = 810

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 53  aacccatccaccagccacagctcc 76
           ||||||| ||||||||||||||||
Sbjct: 729 aacccatgcaccagccacagctcc 706
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>gb|AC123984.14| Mus musculus chromosome 8, clone RP23-78H21, complete sequence
          Length = 256723

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 368    tttgttaatacatgccagcttggaatgg 395
              ||||| ||||||||||||| ||||||||
Sbjct: 168346 tttgtaaatacatgccagcctggaatgg 168373
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>ref|XM_923431.2| PREDICTED: Mus musculus phosphoinositide-3-kinase, class 2, beta
            polypeptide, transcript variant 3 (Pik3c2b), mRNA
          Length = 2234

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 388  tggaatggtctggctccttt 407
            ||||||||||||||||||||
Sbjct: 1620 tggaatggtctggctccttt 1639
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>ref|XM_001001586.1| PREDICTED: Mus musculus phosphoinositide-3-kinase, class 2, beta
            polypeptide, transcript variant 1 (Pik3c2b), mRNA
          Length = 2234

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 388  tggaatggtctggctccttt 407
            ||||||||||||||||||||
Sbjct: 1620 tggaatggtctggctccttt 1639
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>gb|AC137948.12| Mus musculus chromosome 1, clone RP23-393D20, complete sequence
          Length = 233077

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 388  tggaatggtctggctccttt 407
            ||||||||||||||||||||
Sbjct: 3032 tggaatggtctggctccttt 3013
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>emb|Z83234.2|CEK09E4 Caenorhabditis elegans Cosmid K09E4, complete sequence
          Length = 37789

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 353   ttgcatttgcacatttttgttaat 376
             ||||||||| ||||||||||||||
Sbjct: 20201 ttgcatttgaacatttttgttaat 20178
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>gb|AC107842.13| Mus musculus chromosome 1, clone RP23-304O9, complete sequence
          Length = 215781

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   tggaatggtctggctccttt 407
             ||||||||||||||||||||
Sbjct: 87038 tggaatggtctggctccttt 87057
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>gb|AC119851.9| Mus musculus chromosome 7, clone RP23-106N20, complete sequence
          Length = 226307

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      tacccccaccgcccccagct 24
              ||||||||||||||||||||
Sbjct: 134010 tacccccaccgcccccagct 133991
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>gb|AF040646.2| Caenorhabditis elegans fosmid H17B01, complete sequence
          Length = 40812

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 59   tccaccagccacagctcccc 78
            ||||||||||||||||||||
Sbjct: 1751 tccaccagccacagctcccc 1770
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>emb|AL356579.24| Human DNA sequence from clone RP11-593A16 on chromosome 6 Contains the
             5' end of the gene for KIAA1798 protein and a CpG island,
             complete sequence
          Length = 172816

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   cactcatgggggcaccttgg 292
             ||||||||||||||||||||
Sbjct: 89638 cactcatgggggcaccttgg 89657
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>emb|AL683828.8| Mouse DNA sequence from clone RP23-340H1 on chromosome 4 Contains the 3'
              end of the Col27a1 gene for procollagen type XXVII alpha 1,
              the Orm1, Orm2 and Orm3 genes for orosomucoid 1, 2 and 3,
              an orosomucoid pseudogene, the gene for a novel protein
              similar to human AT-hook protein AKNA, gene 4933437N03Rik,
              the Whrn gene for whirlin and two CpG islands, complete
              sequence
          Length = 214370

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     ccacccgcttcaaccttcaa 99
              ||||||||||||||||||||
Sbjct: 212434 ccacccgcttcaaccttcaa 212453
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>gb|AC136964.2| Sus scrofa domestica clone RP44-154L9, complete sequence
          Length = 164640

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     cagctccccgccacccgctt 89
              ||||||||||||||||||||
Sbjct: 122607 cagctccccgccacccgctt 122588
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>gb|AF515053.1| Pongo pygmaeus forkhead box P2 (FOXP2) gene, exons 4 through 7 and
            partial cds
          Length = 14297

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 556  aatgttgttgctacaattac 575
            ||||||||||||||||||||
Sbjct: 6689 aatgttgttgctacaattac 6670
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>emb|AL928624.4| Mouse DNA sequence from clone RP23-454E10 on chromosome 4,
          complete sequence
          Length = 24246

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 80 ccacccgcttcaaccttcaa 99
          ||||||||||||||||||||
Sbjct: 64 ccacccgcttcaaccttcaa 83
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>gb|AC153460.22| Medicago truncatula clone mth2-76i7, complete sequence
          Length = 127094

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 53  aacccatccaccagccacagctcc 76
           ||||||| ||||||||||||||||
Sbjct: 908 aacccatgcaccagccacagctcc 885
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>gb|AC112719.4| Homo sapiens BAC clone RP11-630D6 from 4, complete sequence
          Length = 167284

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 409    tagtcttatggctttgaagtgtat 432
              |||||||||||||||| |||||||
Sbjct: 152747 tagtcttatggctttgtagtgtat 152724
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>gb|AC172371.3| Gallus gallus BAC clone CH261-20I24 from chromosome ul, complete sequence
          Length = 237701

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    gcaatggatgtgcgcctgct 257
              ||||||||||||||||||||
Sbjct: 227401 gcaatggatgtgcgcctgct 227420
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>dbj|AK165803.1| Mus musculus 8 days neonate male testis cDNA, RIKEN full-length
            enriched library, clone:G630085P21 product:hypothetical
            protein, full insert sequence
          Length = 2243

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 388  tggaatggtctggctccttt 407
            ||||||||||||||||||||
Sbjct: 1628 tggaatggtctggctccttt 1647
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>ref|XM_678050.1| PREDICTED: Danio rerio similar to RIKEN cDNA D130059P03 gene
            (LOC555525), mRNA
          Length = 3930

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 107  aacggcatcgcctcctctgc 126
            ||||||||||||||||||||
Sbjct: 2395 aacggcatcgcctcctctgc 2414
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>ref|NM_061577.1| Caenorhabditis elegans H17B01.2 (collagen) mRNA, complete cds
          Length = 1593

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 59  tccaccagccacagctcccc 78
           ||||||||||||||||||||
Sbjct: 939 tccaccagccacagctcccc 958
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>ref|NM_064548.2| Caenorhabditis elegans K09E4.3 (K09E4.3) mRNA, complete cds
          Length = 1115

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 353  ttgcatttgcacatttttgttaat 376
            ||||||||| ||||||||||||||
Sbjct: 1077 ttgcatttgaacatttttgttaat 1100
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>gb|AC004863.5|AC004863 Homo sapiens PAC clone RP4-708P22 from 7, complete sequence
          Length = 133030

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    ccacccgcttcaaccttcaa 99
             ||||||||||||||||||||
Sbjct: 28753 ccacccgcttcaaccttcaa 28734
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>dbj|AB186038.1| Ascaris suum Ascec-3 gene for cecropin P3, complete cds
          Length = 628

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 546 cataagggcaaatgttgttg 565
           ||||||||||||||||||||
Sbjct: 494 cataagggcaaatgttgttg 475
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>dbj|AB186034.1| Ascaris suum Ascec-3 mRNA for cecropin P3, complete cds
          Length = 436

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 546 cataagggcaaatgttgttg 565
           ||||||||||||||||||||
Sbjct: 302 cataagggcaaatgttgttg 283
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 139     ccccgtttccgccgccggccacca 162
               ||||| ||||||||||||||||||
Sbjct: 4227755 ccccggttccgccgccggccacca 4227732
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 55       cccatccaccagccacagctcccc 78
                |||||||||||||||| |||||||
Sbjct: 25555886 cccatccaccagccaccgctcccc 25555909
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>gb|AC022108.4|AC022108 Homo sapiens chromosome 5 clone CTC-426B10, complete sequence
          Length = 235599

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      cccccaccgcccccagctgc 26
              ||||||||||||||||||||
Sbjct: 104687 cccccaccgcccccagctgc 104706
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>gb|AC097454.2| Homo sapiens BAC clone RP11-2F17 from 4, complete sequence
          Length = 163486

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 316    ttacagtcctagaatgaaac 335
              ||||||||||||||||||||
Sbjct: 123437 ttacagtcctagaatgaaac 123418
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>gb|AC012611.6|AC012611 Homo sapiens chromosome 5 clone CTC-554K7, complete sequence
          Length = 115855

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     cccccaccgcccccagctgc 26
             ||||||||||||||||||||
Sbjct: 61084 cccccaccgcccccagctgc 61103
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>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0686C03
          Length = 164529

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 55    cccatccaccagccacagctcccc 78
             |||||||||||||||| |||||||
Sbjct: 42577 cccatccaccagccaccgctcccc 42600
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 139     ccccgtttccgccgccggccacca 162
               ||||| ||||||||||||||||||
Sbjct: 4227742 ccccggttccgccgccggccacca 4227719
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>emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0089D09
             of library OSJNBb from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 104999

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 139   ccccgtttccgccgccggccacca 162
             ||||| ||||||||||||||||||
Sbjct: 56028 ccccggttccgccgccggccacca 56051
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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 246     tgtgcgcctgctgaacgaac 265
               ||||||||||||||||||||
Sbjct: 2838470 tgtgcgcctgctgaacgaac 2838451
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 13      ccgcccccagctgccgccgg 32
               ||||||||||||||||||||
Sbjct: 1107757 ccgcccccagctgccgccgg 1107738
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>emb|BX294368.7| Zebrafish DNA sequence from clone CH211-244N12 in linkage group 6,
             complete sequence
          Length = 147484

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   aacggcatcgcctcctctgc 126
             ||||||||||||||||||||
Sbjct: 48531 aacggcatcgcctcctctgc 48550


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,698,241
Number of Sequences: 3902068
Number of extensions: 4698241
Number of successful extensions: 89945
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89694
Number of HSP's gapped (non-prelim): 251
length of query: 599
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 576
effective length of database: 17,143,297,704
effective search space: 9874539477504
effective search space used: 9874539477504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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