ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd25b15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_185069.1| Oryza sativa (japonica cultivar-group), mRNA Length = 995 Score = 396 bits (200), Expect = e-107 Identities = 332/376 (88%) Strand = Plus / Plus Query: 32 catagagctggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcac 91 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| || | Sbjct: 480 catagagctggtgctgcttacaacaccaaccacaccaacagagaggatgaaggagattgc 539 Query: 92 aaaagcttcagaaggattcgtttatcttgtgagtgctgtcggagttacaggtgcacgctc 151 |||||||||||||||||| |||||||||| ||| |||| |||||||||||||||||||| Sbjct: 540 aaaagcttcagaaggatttatttatcttgtaagttctgttggagttacaggtgcacgctc 599 Query: 152 aaatgtaaacctacgcgttgagcatcttcttcaggagatcaagcaggttacagacaaacc 211 ||||||||| | || |||||| | |||||||||||||||||| |||||||||||||||| Sbjct: 600 aaatgtaaatttgcgtgttgagtaccttcttcaggagatcaagaaggttacagacaaacc 659 Query: 212 tgtggctgttggctttggcatatcaactccagagcatgcgaagcagatcgcaagctgggg 271 ||| |||||||||||||||||||| ||||||||||||| |||||||| ||| ||||||| Sbjct: 660 tgttgctgttggctttggcatatcgactccagagcatgtaaagcagattgcaggctgggg 719 Query: 272 agcggatggtgtgattattggcagtgcaatcgttagacagttgggcgaagccgcttctcc 331 ||| ||||||||||| || ||||| || || ||||||||||| || || || ||||| || Sbjct: 720 agcagatggtgtgatcatcggcagcgctattgttagacagttaggagaggctgcttcacc 779 Query: 332 tgaagaaggactgagaagaatagaagagtacgccaagagcatcaaggctgctattccatg 391 ||||||||| ||| |||| |||||||||| ||||||| ||| ||||||||||| || || Sbjct: 780 tgaagaagggttgaaaagagtagaagagtatgccaagaacatgaaggctgctatgccttg 839 Query: 392 agatgggcagttccat 407 ||||| || ||||||| Sbjct: 840 agatgagcggttccat 855
>dbj|AK073440.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046F03, full insert sequence Length = 1284 Score = 396 bits (200), Expect = e-107 Identities = 332/376 (88%) Strand = Plus / Plus Query: 32 catagagctggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcac 91 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| || | Sbjct: 648 catagagctggtgctgcttacaacaccaaccacaccaacagagaggatgaaggagattgc 707 Query: 92 aaaagcttcagaaggattcgtttatcttgtgagtgctgtcggagttacaggtgcacgctc 151 |||||||||||||||||| |||||||||| ||| |||| |||||||||||||||||||| Sbjct: 708 aaaagcttcagaaggatttatttatcttgtaagttctgttggagttacaggtgcacgctc 767 Query: 152 aaatgtaaacctacgcgttgagcatcttcttcaggagatcaagcaggttacagacaaacc 211 ||||||||| | || |||||| | |||||||||||||||||| |||||||||||||||| Sbjct: 768 aaatgtaaatttgcgtgttgagtaccttcttcaggagatcaagaaggttacagacaaacc 827 Query: 212 tgtggctgttggctttggcatatcaactccagagcatgcgaagcagatcgcaagctgggg 271 ||| |||||||||||||||||||| ||||||||||||| |||||||| ||| ||||||| Sbjct: 828 tgttgctgttggctttggcatatcgactccagagcatgtaaagcagattgcaggctgggg 887 Query: 272 agcggatggtgtgattattggcagtgcaatcgttagacagttgggcgaagccgcttctcc 331 ||| ||||||||||| || ||||| || || ||||||||||| || || || ||||| || Sbjct: 888 agcagatggtgtgatcatcggcagcgctattgttagacagttaggagaggctgcttcacc 947 Query: 332 tgaagaaggactgagaagaatagaagagtacgccaagagcatcaaggctgctattccatg 391 ||||||||| ||| |||| |||||||||| ||||||| ||| ||||||||||| || || Sbjct: 948 tgaagaagggttgaaaagagtagaagagtatgccaagaacatgaaggctgctatgccttg 1007 Query: 392 agatgggcagttccat 407 ||||| || ||||||| Sbjct: 1008 agatgagcggttccat 1023
>gb|AF271384.1|AF271384 Zea mays putative tryptophan synthase alpha (TSAlike) mRNA, complete cds Length = 1447 Score = 252 bits (127), Expect = 1e-63 Identities = 316/379 (83%) Strand = Plus / Plus Query: 7 tgaggagtgaggcaactatgcataacatagagctggtgctacttacaacaccaaccacac 66 ||||||| ||||| | |||||| ||||||||||||||||| |||||||| |||||||| | Sbjct: 635 tgaggagcgaggccattatgcacaacatagagctggtgctgcttacaacgccaaccacgc 694 Query: 67 caacagagaggatgaaggaaatcacaaaagcttcagaaggattcgtttatcttgtgagtg 126 | ||||| ||||||||| ||| || |||||||||||||||| | ||||||||||| | Sbjct: 695 cgacagatcggatgaagggaattgcacaagcttcagaaggatttctctatcttgtgagcg 754 Query: 127 ctgtcggagttacaggtgcacgctcaaatgtaaacctacgcgttgagcatcttcttcagg 186 |||| || ||||||||||||||||||||||||||| |||| || || || |||||| || Sbjct: 755 ctgtaggggttacaggtgcacgctcaaatgtaaacttacgtgtagaacaccttcttaggg 814 Query: 187 agatcaagcaggttacagacaaacctgtggctgttggctttggcatatcaactccagagc 246 |||||||| |||||||||||||||| || |||||||| || || |||| |||||||||| Sbjct: 815 agatcaagaaggttacagacaaaccggtagctgttggtttcggtgtatcgactccagagc 874 Query: 247 atgcgaagcagatcgcaagctggggagcggatggtgtgattattggcagtgcaatcgtta 306 ||| ||| ||||||| ||||||||||||| ||||||||| |||||||||| || || | Sbjct: 875 atgtgaaacagatcgtgggctggggagcggacggtgtgattgttggcagtgcgattgtga 934 Query: 307 gacagttgggcgaagccgcttctcctgaagaaggactgagaagaatagaagagtacgcca 366 |||||| | || || ||| |||||||||| || ||| ||| | || |||||||||| Sbjct: 935 agcagttgtgtgaggctgctactcctgaagagggtctggaaaggctcgaggagtacgcca 994 Query: 367 agagcatcaaggctgctat 385 ||| || ||||||||||| Sbjct: 995 ggagtatgaaggctgctat 1013
>gb|AY103922.1| Zea mays PCO082497 mRNA sequence Length = 1364 Score = 252 bits (127), Expect = 1e-63 Identities = 316/379 (83%) Strand = Plus / Plus Query: 7 tgaggagtgaggcaactatgcataacatagagctggtgctacttacaacaccaaccacac 66 ||||||| ||||| | |||||| ||||||||||||||||| |||||||| |||||||| | Sbjct: 628 tgaggagcgaggccattatgcacaacatagagctggtgctgcttacaacgccaaccacgc 687 Query: 67 caacagagaggatgaaggaaatcacaaaagcttcagaaggattcgtttatcttgtgagtg 126 | ||||| ||||||||| ||| || |||||||||||||||| | ||||||||||| | Sbjct: 688 cgacagatcggatgaagggaattgcacaagcttcagaaggatttctctatcttgtgagcg 747 Query: 127 ctgtcggagttacaggtgcacgctcaaatgtaaacctacgcgttgagcatcttcttcagg 186 |||| || ||||||||||||||||||||||||||| |||| || || || |||||| || Sbjct: 748 ctgtaggggttacaggtgcacgctcaaatgtaaacttacgtgtagaacaccttcttaggg 807 Query: 187 agatcaagcaggttacagacaaacctgtggctgttggctttggcatatcaactccagagc 246 |||||||| |||||||||||||||| || |||||||| || || |||| |||||||||| Sbjct: 808 agatcaagaaggttacagacaaaccggtagctgttggtttcggtgtatcgactccagagc 867 Query: 247 atgcgaagcagatcgcaagctggggagcggatggtgtgattattggcagtgcaatcgtta 306 ||| ||| ||||||| ||||||||||||| ||||||||| |||||||||| || || | Sbjct: 868 atgtgaaacagatcgtgggctggggagcggacggtgtgattgttggcagtgcgattgtga 927 Query: 307 gacagttgggcgaagccgcttctcctgaagaaggactgagaagaatagaagagtacgcca 366 |||||| | || || ||| |||||||||| || ||| ||| | || |||||||||| Sbjct: 928 agcagttgtgtgaggctgctactcctgaagagggtctggaaaggctcgaggagtacgcca 987 Query: 367 agagcatcaaggctgctat 385 ||| || ||||||||||| Sbjct: 988 ggagtatgaaggctgctat 1006
>gb|BT009154.1| Triticum aestivum clone wl1n.pk0067.f2:fis, full insert mRNA sequence Length = 514 Score = 246 bits (124), Expect = 7e-62 Identities = 250/292 (85%) Strand = Plus / Plus Query: 7 tgaggagtgaggcaactatgcataacatagagctggtgctacttacaacaccaaccacac 66 ||||||| ||||| | |||||| ||||||||||||||||| |||||||| |||||||| | Sbjct: 171 tgaggagcgaggccattatgcacaacatagagctggtgctgcttacaacgccaaccacgc 230 Query: 67 caacagagaggatgaaggaaatcacaaaagcttcagaaggattcgtttatcttgtgagtg 126 | ||||| ||||||||| ||| || |||||||||||||||| | ||||||||||| | Sbjct: 231 cgacagatcggatgaagggaattgcacaagcttcagaaggatttctctatcttgtgagcg 290 Query: 127 ctgtcggagttacaggtgcacgctcaaatgtaaacctacgcgttgagcatcttcttcagg 186 |||| || ||||||||||||||||||||||||||| |||| || || || |||||| || Sbjct: 291 ctgtaggggttacaggtgcacgctcaaatgtaaacttacgtgtagaacaccttcttaggg 350 Query: 187 agatcaagcaggttacagacaaacctgtggctgttggctttggcatatcaactccagagc 246 |||||||| |||||||||||||||| || |||||||| || || |||| |||||||||| Sbjct: 351 agatcaagaaggttacagacaaaccggtagctgttggtttcggtgtatcgactccagagc 410 Query: 247 atgcgaagcagatcgcaagctggggagcggatggtgtgattattggcagtgc 298 ||| ||| ||||||| ||||||||||||| ||||||||| |||||||||| Sbjct: 411 atgtgaaacagatcgtgggctggggagcggacggtgtgattgttggcagtgc 462
>ref|NM_185066.1| Oryza sativa (japonica cultivar-group), mRNA Length = 981 Score = 139 bits (70), Expect = 1e-29 Identities = 241/298 (80%) Strand = Plus / Plus Query: 34 tagagctggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaa 93 ||||||||||||| || ||||||||| | ||||| ||||||||||||| |||||| Sbjct: 623 tagagctggtgctgctaacaacaccagctacaccgggagagaggatgaagatcatcacag 682 Query: 94 aagcttcagaaggattcgtttatcttgtgagtgctgtcggagttacaggtgcacgctcaa 153 ||||||||| |||||| ||||| ||||| |||| |||||||| ||| | || ||| Sbjct: 683 aagcttcaggaggatttgtttaccttgttagtgtcaatggagttacgggtccccgtccaa 742 Query: 154 atgtaaacctacgcgttgagcatcttcttcaggagatcaagcaggttacagacaaacctg 213 | |||||| ||||||||||||||| |||||||| ||||||| ||| || |||||| ||| Sbjct: 743 aagtaaacacacgcgttgagcatctccttcaggacatcaagctggtcactgacaaagctg 802 Query: 214 tggctgttggctttggcatatcaactccagagcatgcgaagcagatcgcaagctggggag 273 || ||||||||||||||||||||| || || |||| | |||||| ||| | ||||| | Sbjct: 803 tgtgtgttggctttggcatatcaacccctgaccatgttaggcagatagcagggtggggtg 862 Query: 274 cggatggtgtgattattggcagtgcaatcgttagacagttgggcgaagccgcttctcc 331 | ||||| ||||| ||||| |||||||| || || ||| | || ||||| |||||||| Sbjct: 863 cagatggagtgatcattgggagtgcaatggtgaggcagctaggtgaagcagcttctcc 920
>gb|AY462226.1| Hordeum lechleri indole-3-glycerol phosphate lyase mRNA, partial cds Length = 979 Score = 125 bits (63), Expect = 2e-25 Identities = 246/307 (80%) Strand = Plus / Plus Query: 34 tagagctggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaa 93 |||||||||| |||||||||||||| | ||||| |||||||||||||||| ||||| Sbjct: 485 tagagctggttttacttacaacaccatctacaccgccagagaggatgaaggagatcactg 544 Query: 94 aagcttcagaaggattcgtttatcttgtgagtgctgtcggagttacaggtgcacgctcaa 153 ||||||||| ||| |||||||| ||||| |||| | |||||||| ||||| || ||| Sbjct: 545 aagcttcaggaggcttcgtttaccttgtaagtgtcgacggagttaggggtgcccgtgcaa 604 Query: 154 atgtaaacctacgcgttgagcatcttcttcaggagatcaagcaggttacagacaaacctg 213 || |||| |||||| ||| ||||||| || |||| |||||||| || ||||| | | Sbjct: 605 ccgtgaacccacgcgtcgagagtcttcttaagaagattaagcaggtcactgacaaggcag 664 Query: 214 tggctgttggctttggcatatcaactccagagcatgcgaagcagatcgcaagctggggag 273 |||||||||||||||| || || || || || |||| |||||||| ||| ||||| | Sbjct: 665 tggctgttggctttggaatttcgacccctgaccatgttaagcagattgcagagtggggtg 724 Query: 274 cggatggtgtgattattggcagtgcaatcgttagacagttgggcgaagccgcttctcctg 333 | ||||| ||||| || ||||||||||| || | ||||| || ||||| |||||||| | Sbjct: 725 cagatggagtgatcatcggcagtgcaatggtgaagcagttaggtgaagcagcttctccag 784 Query: 334 aagaagg 340 ||||||| Sbjct: 785 aagaagg 791
>ref|NM_185065.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1368 Score = 115 bits (58), Expect = 2e-22 Identities = 238/298 (79%) Strand = Plus / Plus Query: 34 tagagctggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaa 93 ||||||||||||| ||||| |||||||| |||||| |||| |||||||||| ||||||| Sbjct: 736 tagagctggtgctgcttactacaccaactacaccaccagacaggatgaaggcaatcacag 795 Query: 94 aagcttcagaaggattcgtttatcttgtgagtgctgtcggagttacaggtgcacgctcaa 153 || |||| |||||| ||||| || || |||| ||||||||||| | ||| | Sbjct: 796 ccgcctcaggaggatttgtttacctggttagtgtcaatggagttacaggatctcgccaag 855 Query: 154 atgtaaacctacgcgttgagcatcttcttcaggagatcaagcaggttacagacaaacctg 213 | || |||| || ||||||||||| ||||||||||| |||||||| || |||||| ||| Sbjct: 856 acgtgaacccgcgtgttgagcatctccttcaggagattaagcaggtcactgacaaagctg 915 Query: 214 tggctgttggctttggcatatcaactccagagcatgcgaagcagatcgcaagctggggag 273 || |||||||| |||||||||||| || || |||| | ||||| ||| ||||| | Sbjct: 916 tgtgtgttggctatggcatatcaacccctgatcatgttagacagatagcagagtggggtg 975 Query: 274 cggatggtgtgattattggcagtgcaatcgttagacagttgggcgaagccgcttctcc 331 | ||||| ||||| |||||||||||||| || || ||| |||| ||||| |||||||| Sbjct: 976 cagatggggtgatcattggcagtgcaatggtgaggcagctgggtgaagcagcttctcc 1033
>ref|XM_476874.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1160 Score = 115 bits (58), Expect = 2e-22 Identities = 139/166 (83%) Strand = Plus / Plus Query: 176 tcttcttcaggagatcaagcaggttacagacaaacctgtggctgttggctttggcatatc 235 |||||| ||||| ||||||||||| || |||||| ||||||||||||| || || ||||| Sbjct: 852 tcttctccaggatatcaagcaggtcacggacaaagctgtggctgttgggttcggtatatc 911 Query: 236 aactccagagcatgcgaagcagatcgcaagctggggagcggatggtgtgattattggcag 295 ||||||||||||| ||||||||| || | ||||| || ||||||||||| ||||| || Sbjct: 912 gactccagagcatgtgaagcagattgcgggatggggcgcagatggtgtgatcattgggag 971 Query: 296 tgcaatcgttagacagttgggcgaagccgcttctcctgaagaagga 341 || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 972 cgctatggtgaggcaattgggcgaagctgcttcacccgaagaagga 1017 Score = 115 bits (58), Expect = 2e-22 Identities = 106/122 (86%) Strand = Plus / Plus Query: 36 gagctggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaa 95 |||||||||||||| ||||||||||| ||||||||||| || ||| || |||| |||||| Sbjct: 712 gagctggtgctactgacaacaccaactacaccaacagaaagaatggagaaaattacaaaa 771 Query: 96 gcttcagaaggattcgtttatcttgtgagtgctgtcggagttacaggtgcacgctcaaat 155 ||||| |||||||| |||||||||| || |||| ||||||||||||||||| ||||| Sbjct: 772 gcttctgaaggatttatttatcttgtaagcactgttggagttacaggtgcacgtgcaaat 831 Query: 156 gt 157 || Sbjct: 832 gt 833
>ref|XM_506200.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1506_G02.1 patrial mRNA Length = 1161 Score = 115 bits (58), Expect = 2e-22 Identities = 139/166 (83%) Strand = Plus / Plus Query: 176 tcttcttcaggagatcaagcaggttacagacaaacctgtggctgttggctttggcatatc 235 |||||| ||||| ||||||||||| || |||||| ||||||||||||| || || ||||| Sbjct: 853 tcttctccaggatatcaagcaggtcacggacaaagctgtggctgttgggttcggtatatc 912 Query: 236 aactccagagcatgcgaagcagatcgcaagctggggagcggatggtgtgattattggcag 295 ||||||||||||| ||||||||| || | ||||| || ||||||||||| ||||| || Sbjct: 913 gactccagagcatgtgaagcagattgcgggatggggcgcagatggtgtgatcattgggag 972 Query: 296 tgcaatcgttagacagttgggcgaagccgcttctcctgaagaagga 341 || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 973 cgctatggtgaggcaattgggcgaagctgcttcacccgaagaagga 1018 Score = 115 bits (58), Expect = 2e-22 Identities = 106/122 (86%) Strand = Plus / Plus Query: 36 gagctggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaa 95 |||||||||||||| ||||||||||| ||||||||||| || ||| || |||| |||||| Sbjct: 713 gagctggtgctactgacaacaccaactacaccaacagaaagaatggagaaaattacaaaa 772 Query: 96 gcttcagaaggattcgtttatcttgtgagtgctgtcggagttacaggtgcacgctcaaat 155 ||||| |||||||| |||||||||| || |||| ||||||||||||||||| ||||| Sbjct: 773 gcttctgaaggatttatttatcttgtaagcactgttggagttacaggtgcacgtgcaaat 832 Query: 156 gt 157 || Sbjct: 833 gt 834
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 41 ggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaagcttc 100 |||||| |||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 32891832 ggtgctgcttacaacaccaaccacaccaacagagaggatgaaggagattgcaaaagcttc 32891773 Query: 101 agaaggattcgtttatcttgtg 122 ||||||||| ||||||||||| Sbjct: 32891772 agaaggatttatttatcttgtg 32891751 Score = 113 bits (57), Expect = 7e-22 Identities = 129/153 (84%) Strand = Plus / Minus Query: 255 cagatcgcaagctggggagcggatggtgtgattattggcagtgcaatcgttagacagttg 314 ||||| ||| |||||||||| ||||||||||| || ||||| || || ||||||||||| Sbjct: 32891031 cagattgcaggctggggagcagatggtgtgatcatcggcagcgctattgttagacagtta 32890972 Query: 315 ggcgaagccgcttctcctgaagaaggactgagaagaatagaagagtacgccaagagcatc 374 || || || ||||| ||||||||||| ||| |||| |||||||||| ||||||| ||| Sbjct: 32890971 ggagaggctgcttcacctgaagaagggttgaaaagagtagaagagtatgccaagaacatg 32890912 Query: 375 aaggctgctattccatgagatgggcagttccat 407 ||||||||||| || ||||||| || ||||||| Sbjct: 32890911 aaggctgctatgccttgagatgagcggttccat 32890879 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 195 caggttacagacaaacctgtggctgttggctttggcatatcaactccagagcatg 249 |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 32891171 caggttacagacaaacctgttgctgttggctttggcatatcgactccagagcatg 32891117 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 151 caaatgtaaacctacgcgttgagcatcttcttcaggagatcaagcaggttacagacaaac 210 |||| |||||| ||||||||||||||| |||||||| ||||||| ||| || |||||| Sbjct: 32904555 caaaagtaaacacacgcgttgagcatctccttcaggacatcaagctggtcactgacaaag 32904496 Query: 211 ctgtggctgttggctttggcatatcaac 238 ||||| ||||||||||||||||||||| Sbjct: 32904495 ctgtgtgtgttggctttggcatatcaac 32904468 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 168 gttgagcatcttcttcaggagatcaagcaggttacagacaaacctgtggctgttggcttt 227 ||||||||||| ||||||||||| |||||||| || |||||| ||||| |||||||||| Sbjct: 32923133 gttgagcatctccttcaggagattaagcaggtcactgacaaagctgtgtgtgttggcttt 32923074 Query: 228 ggcatatcaac 238 ||||||||||| Sbjct: 32923073 ggcatatcaac 32923063 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 127 ctgtcggagttacaggtgcacgctcaaatgtaaacctacgcgttgagcatcttcttcagg 186 |||| ||||||||||||||||||||||||||||| | || |||||| | |||||||||| Sbjct: 32891360 ctgttggagttacaggtgcacgctcaaatgtaaatttgcgtgttgagtaccttcttcagg 32891301 Query: 187 agatcaagcaggtt 200 |||||||| ||||| Sbjct: 32891300 agatcaagaaggtt 32891287 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 168 gttgagcatcttcttcaggagatcaagcaggttacagacaaacctgtggctgttggcttt 227 ||||||||||| ||||||||||| |||||||| || |||||| ||||| |||||||| | Sbjct: 32911206 gttgagcatctccttcaggagattaagcaggtcactgacaaagctgtgtgtgttggctat 32911147 Query: 228 ggcatatcaac 238 ||||||||||| Sbjct: 32911146 ggcatatcaac 32911136 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 41 ggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaagcttc 100 |||||| || ||||||||| | ||||| ||||||||||||| |||||| ||||||| Sbjct: 32904773 ggtgctgctaacaacaccagctacaccgggagagaggatgaagatcatcacagaagcttc 32904714 Query: 101 agaaggattcgtttatcttgtgagtgct 128 || |||||| ||||| ||||| |||||| Sbjct: 32904713 aggaggatttgtttaccttgtaagtgct 32904686 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 267 tggggagcggatggtgtgattattggcagtgcaatcgttagacagttgggcgaagccgct 326 ||||| || ||||| ||||| |||||||||||||| || || ||| |||| ||||| ||| Sbjct: 32911008 tggggtgcagatggggtgatcattggcagtgcaatggtgaggcagctgggtgaagcagct 32910949 Query: 327 tctcc 331 ||||| Sbjct: 32910948 tctcc 32910944
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 41 ggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaagcttc 100 |||||| |||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 98343 ggtgctgcttacaacaccaaccacaccaacagagaggatgaaggagattgcaaaagcttc 98402 Query: 101 agaaggattcgtttatcttgtg 122 ||||||||| ||||||||||| Sbjct: 98403 agaaggatttatttatcttgtg 98424 Score = 113 bits (57), Expect = 7e-22 Identities = 129/153 (84%) Strand = Plus / Plus Query: 255 cagatcgcaagctggggagcggatggtgtgattattggcagtgcaatcgttagacagttg 314 ||||| ||| |||||||||| ||||||||||| || ||||| || || ||||||||||| Sbjct: 99144 cagattgcaggctggggagcagatggtgtgatcatcggcagcgctattgttagacagtta 99203 Query: 315 ggcgaagccgcttctcctgaagaaggactgagaagaatagaagagtacgccaagagcatc 374 || || || ||||| ||||||||||| ||| |||| |||||||||| ||||||| ||| Sbjct: 99204 ggagaggctgcttcacctgaagaagggttgaaaagagtagaagagtatgccaagaacatg 99263 Query: 375 aaggctgctattccatgagatgggcagttccat 407 ||||||||||| || ||||||| || ||||||| Sbjct: 99264 aaggctgctatgccttgagatgagcggttccat 99296 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 195 caggttacagacaaacctgtggctgttggctttggcatatcaactccagagcatg 249 |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 99004 caggttacagacaaacctgttgctgttggctttggcatatcgactccagagcatg 99058 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 151 caaatgtaaacctacgcgttgagcatcttcttcaggagatcaagcaggttacagacaaac 210 |||| |||||| ||||||||||||||| |||||||| ||||||| ||| || |||||| Sbjct: 85620 caaaagtaaacacacgcgttgagcatctccttcaggacatcaagctggtcactgacaaag 85679 Query: 211 ctgtggctgttggctttggcatatcaac 238 ||||| ||||||||||||||||||||| Sbjct: 85680 ctgtgtgtgttggctttggcatatcaac 85707 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 168 gttgagcatcttcttcaggagatcaagcaggttacagacaaacctgtggctgttggcttt 227 ||||||||||| ||||||||||| |||||||| || |||||| ||||| |||||||||| Sbjct: 67042 gttgagcatctccttcaggagattaagcaggtcactgacaaagctgtgtgtgttggcttt 67101 Query: 228 ggcatatcaac 238 ||||||||||| Sbjct: 67102 ggcatatcaac 67112 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 127 ctgtcggagttacaggtgcacgctcaaatgtaaacctacgcgttgagcatcttcttcagg 186 |||| ||||||||||||||||||||||||||||| | || |||||| | |||||||||| Sbjct: 98815 ctgttggagttacaggtgcacgctcaaatgtaaatttgcgtgttgagtaccttcttcagg 98874 Query: 187 agatcaagcaggtt 200 |||||||| ||||| Sbjct: 98875 agatcaagaaggtt 98888 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 168 gttgagcatcttcttcaggagatcaagcaggttacagacaaacctgtggctgttggcttt 227 ||||||||||| ||||||||||| |||||||| || |||||| ||||| |||||||| | Sbjct: 78969 gttgagcatctccttcaggagattaagcaggtcactgacaaagctgtgtgtgttggctat 79028 Query: 228 ggcatatcaac 238 ||||||||||| Sbjct: 79029 ggcatatcaac 79039 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 41 ggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaagcttc 100 |||||| || ||||||||| | ||||| ||||||||||||| |||||| ||||||| Sbjct: 85402 ggtgctgctaacaacaccagctacaccgggagagaggatgaagatcatcacagaagcttc 85461 Query: 101 agaaggattcgtttatcttgtgagtgct 128 || |||||| ||||| ||||| |||||| Sbjct: 85462 aggaggatttgtttaccttgtaagtgct 85489 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 267 tggggagcggatggtgtgattattggcagtgcaatcgttagacagttgggcgaagccgct 326 ||||| || ||||| ||||| |||||||||||||| || || ||| |||| ||||| ||| Sbjct: 79167 tggggtgcagatggggtgatcattggcagtgcaatggtgaggcagctgggtgaagcagct 79226 Query: 327 tctcc 331 ||||| Sbjct: 79227 tctcc 79231
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 41 ggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaagcttc 100 |||||| |||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 32982342 ggtgctgcttacaacaccaaccacaccaacagagaggatgaaggagattgcaaaagcttc 32982283 Query: 101 agaaggattcgtttatcttgtg 122 ||||||||| ||||||||||| Sbjct: 32982282 agaaggatttatttatcttgtg 32982261 Score = 113 bits (57), Expect = 7e-22 Identities = 129/153 (84%) Strand = Plus / Minus Query: 255 cagatcgcaagctggggagcggatggtgtgattattggcagtgcaatcgttagacagttg 314 ||||| ||| |||||||||| ||||||||||| || ||||| || || ||||||||||| Sbjct: 32981541 cagattgcaggctggggagcagatggtgtgatcatcggcagcgctattgttagacagtta 32981482 Query: 315 ggcgaagccgcttctcctgaagaaggactgagaagaatagaagagtacgccaagagcatc 374 || || || ||||| ||||||||||| ||| |||| |||||||||| ||||||| ||| Sbjct: 32981481 ggagaggctgcttcacctgaagaagggttgaaaagagtagaagagtatgccaagaacatg 32981422 Query: 375 aaggctgctattccatgagatgggcagttccat 407 ||||||||||| || ||||||| || ||||||| Sbjct: 32981421 aaggctgctatgccttgagatgagcggttccat 32981389 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 195 caggttacagacaaacctgtggctgttggctttggcatatcaactccagagcatg 249 |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 32981681 caggttacagacaaacctgttgctgttggctttggcatatcgactccagagcatg 32981627 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 151 caaatgtaaacctacgcgttgagcatcttcttcaggagatcaagcaggttacagacaaac 210 |||| |||||| ||||||||||||||| |||||||| ||||||| ||| || |||||| Sbjct: 32995065 caaaagtaaacacacgcgttgagcatctccttcaggacatcaagctggtcactgacaaag 32995006 Query: 211 ctgtggctgttggctttggcatatcaac 238 ||||| ||||||||||||||||||||| Sbjct: 32995005 ctgtgtgtgttggctttggcatatcaac 32994978 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 168 gttgagcatcttcttcaggagatcaagcaggttacagacaaacctgtggctgttggcttt 227 ||||||||||| ||||||||||| |||||||| || |||||| ||||| |||||||||| Sbjct: 33013643 gttgagcatctccttcaggagattaagcaggtcactgacaaagctgtgtgtgttggcttt 33013584 Query: 228 ggcatatcaac 238 ||||||||||| Sbjct: 33013583 ggcatatcaac 33013573 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 127 ctgtcggagttacaggtgcacgctcaaatgtaaacctacgcgttgagcatcttcttcagg 186 |||| ||||||||||||||||||||||||||||| | || |||||| | |||||||||| Sbjct: 32981870 ctgttggagttacaggtgcacgctcaaatgtaaatttgcgtgttgagtaccttcttcagg 32981811 Query: 187 agatcaagcaggtt 200 |||||||| ||||| Sbjct: 32981810 agatcaagaaggtt 32981797 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 168 gttgagcatcttcttcaggagatcaagcaggttacagacaaacctgtggctgttggcttt 227 ||||||||||| ||||||||||| |||||||| || |||||| ||||| |||||||| | Sbjct: 33001716 gttgagcatctccttcaggagattaagcaggtcactgacaaagctgtgtgtgttggctat 33001657 Query: 228 ggcatatcaac 238 ||||||||||| Sbjct: 33001656 ggcatatcaac 33001646 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 41 ggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaagcttc 100 |||||| || ||||||||| | ||||| ||||||||||||| |||||| ||||||| Sbjct: 32995283 ggtgctgctaacaacaccagctacaccgggagagaggatgaagatcatcacagaagcttc 32995224 Query: 101 agaaggattcgtttatcttgtgagtgct 128 || |||||| ||||| ||||| |||||| Sbjct: 32995223 aggaggatttgtttaccttgtaagtgct 32995196 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 267 tggggagcggatggtgtgattattggcagtgcaatcgttagacagttgggcgaagccgct 326 ||||| || ||||| ||||| |||||||||||||| || || ||| |||| ||||| ||| Sbjct: 33001518 tggggtgcagatggggtgatcattggcagtgcaatggtgaggcagctgggtgaagcagct 33001459 Query: 327 tctcc 331 ||||| Sbjct: 33001458 tctcc 33001454
>dbj|AK104002.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-G11, full insert sequence Length = 1256 Score = 115 bits (58), Expect = 2e-22 Identities = 139/166 (83%) Strand = Plus / Plus Query: 176 tcttcttcaggagatcaagcaggttacagacaaacctgtggctgttggctttggcatatc 235 |||||| ||||| ||||||||||| || |||||| ||||||||||||| || || ||||| Sbjct: 852 tcttctccaggatatcaagcaggtcacggacaaagctgtggctgttgggttcggtatatc 911 Query: 236 aactccagagcatgcgaagcagatcgcaagctggggagcggatggtgtgattattggcag 295 ||||||||||||| ||||||||| || | ||||| || ||||||||||| ||||| || Sbjct: 912 gactccagagcatgtgaagcagattgcgggatggggcgcagatggtgtgatcattgggag 971 Query: 296 tgcaatcgttagacagttgggcgaagccgcttctcctgaagaagga 341 || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 972 cgctatggtgaggcaattgggcgaagctgcttcacccgaagaagga 1017 Score = 115 bits (58), Expect = 2e-22 Identities = 106/122 (86%) Strand = Plus / Plus Query: 36 gagctggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaa 95 |||||||||||||| ||||||||||| ||||||||||| || ||| || |||| |||||| Sbjct: 712 gagctggtgctactgacaacaccaactacaccaacagaaagaatggagaaaattacaaaa 771 Query: 96 gcttcagaaggattcgtttatcttgtgagtgctgtcggagttacaggtgcacgctcaaat 155 ||||| |||||||| |||||||||| || |||| ||||||||||||||||| ||||| Sbjct: 772 gcttctgaaggatttatttatcttgtaagcactgttggagttacaggtgcacgtgcaaat 831 Query: 156 gt 157 || Sbjct: 832 gt 833
>dbj|AK072595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E11, full insert sequence Length = 1372 Score = 115 bits (58), Expect = 2e-22 Identities = 238/298 (79%) Strand = Plus / Plus Query: 34 tagagctggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaa 93 ||||||||||||| ||||| |||||||| |||||| |||| |||||||||| ||||||| Sbjct: 751 tagagctggtgctgcttactacaccaactacaccaccagacaggatgaaggcaatcacag 810 Query: 94 aagcttcagaaggattcgtttatcttgtgagtgctgtcggagttacaggtgcacgctcaa 153 || |||| |||||| ||||| || || |||| ||||||||||| | ||| | Sbjct: 811 ccgcctcaggaggatttgtttacctggttagtgtcaatggagttacaggatctcgccaag 870 Query: 154 atgtaaacctacgcgttgagcatcttcttcaggagatcaagcaggttacagacaaacctg 213 | || |||| || ||||||||||| ||||||||||| |||||||| || |||||| ||| Sbjct: 871 acgtgaacccgcgtgttgagcatctccttcaggagattaagcaggtcactgacaaagctg 930 Query: 214 tggctgttggctttggcatatcaactccagagcatgcgaagcagatcgcaagctggggag 273 || |||||||| |||||||||||| || || |||| | ||||| ||| ||||| | Sbjct: 931 tgtgtgttggctatggcatatcaacccctgatcatgttagacagatagcagagtggggtg 990 Query: 274 cggatggtgtgattattggcagtgcaatcgttagacagttgggcgaagccgcttctcc 331 | ||||| ||||| |||||||||||||| || || ||| |||| ||||| |||||||| Sbjct: 991 cagatggggtgatcattggcagtgcaatggtgaggcagctgggtgaagcagcttctcc 1048
>dbj|AK066734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078I01, full insert sequence Length = 1257 Score = 115 bits (58), Expect = 2e-22 Identities = 139/166 (83%) Strand = Plus / Plus Query: 176 tcttcttcaggagatcaagcaggttacagacaaacctgtggctgttggctttggcatatc 235 |||||| ||||| ||||||||||| || |||||| ||||||||||||| || || ||||| Sbjct: 853 tcttctccaggatatcaagcaggtcacggacaaagctgtggctgttgggttcggtatatc 912 Query: 236 aactccagagcatgcgaagcagatcgcaagctggggagcggatggtgtgattattggcag 295 ||||||||||||| ||||||||| || | ||||| || ||||||||||| ||||| || Sbjct: 913 gactccagagcatgtgaagcagattgcgggatggggcgcagatggtgtgatcattgggag 972 Query: 296 tgcaatcgttagacagttgggcgaagccgcttctcctgaagaagga 341 || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 973 cgctatggtgaggcaattgggcgaagctgcttcacccgaagaagga 1018 Score = 115 bits (58), Expect = 2e-22 Identities = 106/122 (86%) Strand = Plus / Plus Query: 36 gagctggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaa 95 |||||||||||||| ||||||||||| ||||||||||| || ||| || |||| |||||| Sbjct: 713 gagctggtgctactgacaacaccaactacaccaacagaaagaatggagaaaattacaaaa 772 Query: 96 gcttcagaaggattcgtttatcttgtgagtgctgtcggagttacaggtgcacgctcaaat 155 ||||| |||||||| |||||||||| || |||| ||||||||||||||||| ||||| Sbjct: 773 gcttctgaaggatttatttatcttgtaagcactgttggagttacaggtgcacgtgcaaat 832 Query: 156 gt 157 || Sbjct: 833 gt 834
>dbj|AB124850.1| Triticum aestivum TaBx1-D mRNA for Indole synthase, complete cds Length = 1298 Score = 105 bits (53), Expect = 2e-19 Identities = 113/133 (84%) Strand = Plus / Plus Query: 196 aggttacagacaaacctgtggctgttggctttggcatatcaactccagagcatgcgaagc 255 ||||||| ||||||||||| |||||||||||||||||||||| || || || | |||| Sbjct: 804 aggttactgacaaacctgttgctgttggctttggcatatcaaaacctgaacacgtaaagc 863 Query: 256 agatcgcaagctggggagcggatggtgtgattattggcagtgcaatcgttagacagttgg 315 |||| ||||| ||||| |||||||| ||||| ||||||||||| || || || ||||||| Sbjct: 864 agattgcaagatggggtgcggatggggtgatcattggcagtgcgatggtgaggcagttgg 923 Query: 316 gcgaagccgcttc 328 | ||||| ||||| Sbjct: 924 gtgaagcagcttc 936 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 36 gagctggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaa 95 ||||||||||| || ||||||||| ||| |||| ||| || |||||||||||||| ||| Sbjct: 644 gagctggtgctgctcacaacaccagccataccagaagaaagaatgaaggaaatcacgaaa 703 Query: 96 gcttcagaaggattcgttta 115 ||||| ||||| ||| |||| Sbjct: 704 gcttcggaaggtttcattta 723
>dbj|AB094060.1| Triticum aestivum TaBx1-A mRNA for indole synthase, complete cds Length = 1315 Score = 105 bits (53), Expect = 2e-19 Identities = 233/293 (79%) Strand = Plus / Plus Query: 36 gagctggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaa 95 ||||||||||| || ||||||||| ||| |||| ||| || ||||||| |||||| ||| Sbjct: 642 gagctggtgctgctcacaacaccagccataccagaagaaagaatgaagggaatcacgaaa 701 Query: 96 gcttcagaaggattcgtttatcttgtgagtgctgtcggagttacaggtgcacgctcaaat 155 ||||| ||||| ||| |||| || ||||| | |||||||||||| | || ||| Sbjct: 702 gcttcggaaggtttcatttacctggtgagcgtcaatggagttacaggtccccgtgaaaac 761 Query: 156 gtaaacctacgcgttgagcatcttcttcaggagatcaagcaggttacagacaaacctgtg 215 || ||||| || |||||| || |||| ||||| || ||||||| ||||||||||| Sbjct: 762 gtgaacctgcgggttgagtccctcattcaagagataaaaaaggttactgacaaacctgtt 821 Query: 216 gctgttggctttggcatatcaactccagagcatgcgaagcagatcgcaagctggggagcg 275 |||||||||||||||||||||| || || || | |||||||| ||| | ||||| ||| Sbjct: 822 gctgttggctttggcatatcaaaacctgaacacgtaaagcagattgcaggatggggtgcg 881 Query: 276 gatggtgtgattattggcagtgcaatcgttagacagttgggcgaagccgcttc 328 ||||| ||||| ||||||||||| || || || |||||||| ||||| ||||| Sbjct: 882 gatggggtgatcattggcagtgcgatggtgaggcagttgggtgaagcagcttc 934
>ref|NM_185063.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 103 bits (52), Expect = 7e-19 Identities = 136/164 (82%) Strand = Plus / Plus Query: 168 gttgagcatcttcttcaggagatcaagcaggttacagacaaacctgtggctgttggcttt 227 ||||||||||| ||||||||||| |||||||| || |||||| ||||| |||||||||| Sbjct: 748 gttgagcatctccttcaggagattaagcaggtcactgacaaagctgtgtgtgttggcttt 807 Query: 228 ggcatatcaactccagagcatgcgaagcagatcgcaagctggggagcggatggtgtgatt 287 ||||||||||| || || |||| | ||||| ||| ||||| || ||||| ||||| Sbjct: 808 ggcatatcaacccctgatcatgttagacagatagcagattggggtgcagatggagtgatc 867 Query: 288 attggcagtgcaatcgttagacagttgggcgaagccgcttctcc 331 |||||||| ||||| || || |||||||| ||||| |||||||| Sbjct: 868 attggcagcgcaatggtgaggcagttgggtgaagcagcttctcc 911 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 34 tagagctggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaa 93 ||||||||||||| ||||| |||||| | ||||| |||| |||||||||| ||||||| Sbjct: 614 tagagctggtgctgcttactacaccagctacaccggcagacaggatgaaggcaatcacag 673 Query: 94 aagcttcagaaggattcgtttatct 118 ||||||| |||||| |||||||| Sbjct: 674 cggcttcaggaggatttgtttatct 698
>dbj|AB124849.1| Triticum aestivum TaBx1-B mRNA for Indole synthase, complete cds Length = 1308 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Plus Query: 196 aggttacagacaaacctgtggctgttggctttggcatatcaactccagagcatgcgaagc 255 ||||||| ||||||||||| |||||||||||||||||||||| || || || | |||| Sbjct: 810 aggttactgacaaacctgttgctgttggctttggcatatcaaaacctgaacacgtaaagc 869 Query: 256 agatcgcaagctggggagcggatggtgtgattattggcagtgcaatcgttagacagttgg 315 |||| ||| | ||||| |||||||| ||||| ||||||||||| || || || ||||| | Sbjct: 870 agattgcagggtggggtgcggatggggtgatcattggcagtgcgatggtgaggcagttag 929 Query: 316 gcgaagccgcttctcctgaagaaggactgagaagaataga 355 | ||||| ||||| || |||||||| ||| |||| |||| Sbjct: 930 gtgaagcagcttcgcccaaagaaggattgaaaagactaga 969 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 36 gagctggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaa 95 ||||||||||| || ||||||||| ||| |||| ||| || |||||||||||||| ||| Sbjct: 650 gagctggtgctgctcacaacaccagccataccagaagaaagaatgaaggaaatcacgaaa 709 Query: 96 gcttcagaaggattcgtttatcttgtgag 124 ||||||||||| ||| |||| || ||||| Sbjct: 710 gcttcagaaggtttcatttacctggtgag 738
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 41 ggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaagcttc 100 ||||||||| ||||||||||| ||||||||||| || ||| || |||| ||||||||||| Sbjct: 4363630 ggtgctactgacaacaccaactacaccaacagaaagaatggagaaaattacaaaagcttc 4363571 Query: 101 agaaggattcgtttatcttgtgag 124 |||||||| ||||||||||||| Sbjct: 4363570 tgaaggatttatttatcttgtgag 4363547 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 204 gacaaacctgtggctgttggctttggcatatcaactccagagcatgcgaagcag 257 |||||| ||||||||||||| || || ||||| ||||||||||||| ||||||| Sbjct: 4363125 gacaaagctgtggctgttgggttcggtatatcgactccagagcatgtgaagcag 4363072 Score = 46.1 bits (23), Expect = 0.13 Identities = 62/75 (82%) Strand = Plus / Minus Query: 267 tggggagcggatggtgtgattattggcagtgcaatcgttagacagttgggcgaagccgct 326 ||||| || ||||||||||| ||||| || || || || || || ||||||||||| ||| Sbjct: 4362968 tggggcgcagatggtgtgatcattgggagcgctatggtgaggcaattgggcgaagctgct 4362909 Query: 327 tctcctgaagaagga 341 || || ||||||||| Sbjct: 4362908 tcacccgaagaagga 4362894
>dbj|AP003835.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1506_G02 Length = 106742 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 41 ggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaagcttc 100 ||||||||| ||||||||||| ||||||||||| || ||| || |||| ||||||||||| Sbjct: 3479 ggtgctactgacaacaccaactacaccaacagaaagaatggagaaaattacaaaagcttc 3420 Query: 101 agaaggattcgtttatcttgtgag 124 |||||||| ||||||||||||| Sbjct: 3419 tgaaggatttatttatcttgtgag 3396 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 204 gacaaacctgtggctgttggctttggcatatcaactccagagcatgcgaagcag 257 |||||| ||||||||||||| || || ||||| ||||||||||||| ||||||| Sbjct: 2974 gacaaagctgtggctgttgggttcggtatatcgactccagagcatgtgaagcag 2921 Score = 46.1 bits (23), Expect = 0.13 Identities = 62/75 (82%) Strand = Plus / Minus Query: 267 tggggagcggatggtgtgattattggcagtgcaatcgttagacagttgggcgaagccgct 326 ||||| || ||||||||||| ||||| || || || || || || ||||||||||| ||| Sbjct: 2817 tggggcgcagatggtgtgatcattgggagcgctatggtgaggcaattgggcgaagctgct 2758 Query: 327 tctcctgaagaagga 341 || || ||||||||| Sbjct: 2757 tcacccgaagaagga 2743
>gb|AY107255.1| Zea mays PCO145511 mRNA sequence Length = 769 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 176 tcttcttcaggagatcaagcaggttacagacaaacctgtggctgttggctttggcatatc 235 |||||||||||| |||||| |||| ||||| ||||| ||||||||||||||||| | || Sbjct: 398 tcttcttcaggatatcaagaaggtgacagaaaaacccgtggctgttggctttggtgtgtc 457 Query: 236 aactccagagcatgcgaagcagatcgcaagctggggagcggatggtgtgattat 289 ||||||||||||| |||||| ||| | ||||| || |||||||||||||| Sbjct: 458 gactccagagcatgtccggcagattgcaggatggggcgcagatggtgtgattat 511 Score = 60.0 bits (30), Expect = 9e-06 Identities = 102/126 (80%) Strand = Plus / Plus Query: 34 tagagctggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaa 93 |||||||||||||| | |||||||| || ||||||| || || ||| || |||| || Sbjct: 256 tagagctggtgctattgacaacaccgactacaccaaatgaaagaatggagaaaattgcac 315 Query: 94 aagcttcagaaggattcgtttatcttgtgagtgctgtcggagttacaggtgcacgctcaa 153 | |||||||||||||| |||||||||| || |||| |||||||| ||| |||| ||| Sbjct: 316 aggcttcagaaggatttatttatcttgtaagcactgttggagttactggtacacgtgcaa 375 Query: 154 atgtaa 159 |||||| Sbjct: 376 atgtaa 381
>dbj|AK102456.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094B09, full insert sequence Length = 2873 Score = 69.9 bits (35), Expect = 9e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 231 atatcaactccagagcatgcgaagcagatcgcaagctggggagcggatggtgtgattatt 290 ||||| ||||||||||||| ||||||||| || | ||||| || ||||||||||| ||| Sbjct: 2525 atatcgactccagagcatgtgaagcagattgcgggatggggcgcagatggtgtgatcatt 2584 Query: 291 ggcagtgcaatcgttagacagttgggcgaagccgcttctcctgaagaagga 341 || || || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 2585 gggagcgctatggtgaggcaattgggcgaagctgcttcacccgaagaagga 2635
>gb|AY254104.1| Zea mays clone ASJ-Bx1.2 indole synthase mRNA, complete cds Length = 1044 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 36 gagctggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaa 95 ||||||||||| || ||||||||| ||| |||| ||| ||||||||||| ||||| || Sbjct: 688 gagctggtgctgctgacaacaccagccataccagaagacaggatgaaggagatcaccaag 747 Query: 96 gcttcagaaggattcgt 112 ||||||||||| ||||| Sbjct: 748 gcttcagaaggcttcgt 764
>gb|AY254103.1| Zea mays clone ASJ-Bx1.1 indole synthase mRNA, complete cds Length = 1044 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 36 gagctggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaa 95 ||||||||||| || ||||||||| ||| |||| ||| ||||||||||| ||||| || Sbjct: 688 gagctggtgctgctgacaacaccagccataccagaagacaggatgaaggagatcaccaag 747 Query: 96 gcttcagaaggattcgt 112 ||||||||||| ||||| Sbjct: 748 gcttcagaaggcttcgt 764
>gb|AY104439.1| Zea mays PCO064449 mRNA sequence Length = 1504 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 36 gagctggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaa 95 ||||||||||| || ||||||||| ||| |||| ||| ||||||||||| ||||| || Sbjct: 743 gagctggtgctgctgacaacaccagccataccagaagacaggatgaaggagatcaccaag 802 Query: 96 gcttcagaaggattcgt 112 ||||||||||| ||||| Sbjct: 803 gcttcagaaggcttcgt 819 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 216 gctgttggctttggcatatcaactccagagcatgcgaagcagat 259 ||||||||||| |||||||| | |||||||| | ||||||||| Sbjct: 923 gctgttggcttcggcatatccaagccagagcacgtgaagcagat 966
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 204 gacaaacctgtggctgttggctttggcatatcaactccagagcatgcgaagcag 257 |||||| ||||||||||||| || || ||||| ||||||||||||| ||||||| Sbjct: 184179 gacaaagctgtggctgttgggttcggtatatcgactccagagcatgtgaagcag 184126 Score = 46.1 bits (23), Expect = 0.13 Identities = 62/75 (82%) Strand = Plus / Minus Query: 267 tggggagcggatggtgtgattattggcagtgcaatcgttagacagttgggcgaagccgct 326 ||||| || ||||||||||| ||||| || || || || || || ||||||||||| ||| Sbjct: 184022 tggggcgcagatggtgtgatcattgggagcgctatggtgaggcaattgggcgaagctgct 183963 Query: 327 tctcctgaagaagga 341 || || ||||||||| Sbjct: 183962 tcacccgaagaagga 183948
>ref|NM_115321.2| Arabidopsis thaliana TSA1 (TRYPTOPHAN SYNTHASE ALPHA CHAIN); tryptophan synthase AT3G54640 (TSA1) mRNA, complete cds Length = 1331 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 31 acatagagctggtgctacttacaacaccaaccacaccaacagagaggatgaag 83 |||| |||||||| ||||| || ||||||||||||||||||||| | |||||| Sbjct: 798 acattgagctggtcctactcactacaccaaccacaccaacagagcgaatgaag 850 Score = 42.1 bits (21), Expect = 2.1 Identities = 81/101 (80%) Strand = Plus / Plus Query: 201 acagacaaacctgtggctgttggctttggcatatcaactccagagcatgcgaagcagatc 260 |||||||| || ||||| || || ||||| ||||||| || ||||||| ||| ||||| Sbjct: 968 acagacaagccggtggcagtcggttttggaatatcaaagccggagcatgtgaaacagata 1027 Query: 261 gcaagctggggagcggatggtgtgattattggcagtgcaat 301 || | |||||||| ||||| ||||| | ||||||||||| Sbjct: 1028 gctggatggggagctgatggagtgatcgtaggcagtgcaat 1068
>gb|AY316528.1| Brassica oleracea var. capitata putative tryptophan synthase alpha chain mRNA, partial cds Length = 800 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 201 acagacaaacctgtggctgttggctttggcatatcaactccagagcatgcgaagcagatc 260 |||||||| || |||||||| || ||||| ||||||| || ||||||| ||| ||||| Sbjct: 490 acagacaagccagtggctgtcggttttggaatatcaaagcctgagcatgtgaaacagata 549 Query: 261 gcaagctggggagcggatggtgtgattattggcagtgcaat 301 || | |||||||| ||||| |||||| | ||||||||||| Sbjct: 550 gctggatggggagctgatggagtgattgtaggcagtgcaat 590 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 39 ctggtgctacttacaacaccaaccacaccaacagagaggatgaag 83 ||||| ||||| || |||||||| |||||||||||||| |||||| Sbjct: 328 ctggtcctactcactacaccaacaacaccaacagagagaatgaag 372
>gb|BT009176.1| Triticum aestivum clone wl1n.pk0109.d5:fis, full insert mRNA sequence Length = 1041 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 36 gagctggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaa 95 ||||||||||| || ||||||||| ||| |||| || ||||||||||| ||||| || Sbjct: 274 gagctggtgctgctgacaacaccagccataccagaggacaggatgaaggagatcaccaag 333 Query: 96 gcttcagaaggattcgt 112 ||||||||||| ||||| Sbjct: 334 gcttcagaaggcttcgt 350 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 216 gctgttggctttggcatatcaactccagagcatgcgaagcagat 259 ||||||||||| |||||||| | |||||||| | ||||||||| Sbjct: 454 gctgttggcttcggcatatccaagccagagcacgtgaagcagat 497
>emb|BX825792.1|CNS0A6HC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL62ZG07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1101 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 31 acatagagctggtgctacttacaacaccaaccacaccaacagagaggatgaag 83 |||| |||||||| ||||| || ||||||||||||||||||||| | |||||| Sbjct: 598 acattgagctggtcctactaactacaccaaccacaccaacagagcgaatgaag 650
>gb|AY087980.1| Arabidopsis thaliana clone 40110 mRNA, complete sequence Length = 1258 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 31 acatagagctggtgctacttacaacaccaaccacaccaacagagaggatgaag 83 |||| |||||||| ||||| || ||||||||||||||||||||| | |||||| Sbjct: 797 acattgagctggtcctactcactacaccaaccacaccaacagagcgaatgaag 849 Score = 42.1 bits (21), Expect = 2.1 Identities = 81/101 (80%) Strand = Plus / Plus Query: 201 acagacaaacctgtggctgttggctttggcatatcaactccagagcatgcgaagcagatc 260 |||||||| || ||||| || || ||||| ||||||| || ||||||| ||| ||||| Sbjct: 967 acagacaagccggtggcagtcggttttggaatatcaaagccggagcatgtgaaacagata 1026 Query: 261 gcaagctggggagcggatggtgtgattattggcagtgcaat 301 || | |||||||| ||||| ||||| | ||||||||||| Sbjct: 1027 gctggatggggagctgatggagtgatcgtaggcagtgcaat 1067
>emb|X76713.1|ZMTRPA Z.mays (C6000237) trpA gene Length = 4796 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 41 ggtgctacttacaacaccaaccacaccaacagagaggatgaaggaaatcacaaaagcttc 100 |||||| || ||||||||| ||| |||| ||| ||||||||||| ||||| || ||||| Sbjct: 2793 ggtgctgctgacaacaccagccataccagaagacaggatgaaggagatcaccaaggcttc 2852 Query: 101 agaaggattcgt 112 |||||| ||||| Sbjct: 2853 agaaggcttcgt 2864
>emb|AJ841704.1| Isatis tinctoria mRNA for tryptophan synthase, alpha subunit (TSA1) (tsa gene) Length = 1128 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 30 aacatagagctggtgctacttacaacaccaaccacaccaacagagaggatgaag 83 ||||| || ||||| ||||| || ||||||||||||||||||||| | |||||| Sbjct: 625 aacattgaactggtcctactcactacaccaaccacaccaacagagcgaatgaag 678 Score = 42.1 bits (21), Expect = 2.1 Identities = 81/101 (80%) Strand = Plus / Plus Query: 201 acagacaaacctgtggctgttggctttggcatatcaactccagagcatgcgaagcagatc 260 |||||||| || ||||| || || ||||| |||||| || ||||||| ||| ||||| Sbjct: 796 acagacaagccagtggcggtcggttttggaatatcacagcctgagcatgtgaaacagata 855 Query: 261 gcaagctggggagcggatggtgtgattattggcagtgcaat 301 || | |||||||| ||||| |||||| | ||||||||||| Sbjct: 856 gctggttggggagctgatggagtgattgtaggcagtgcaat 896
>gb|AF271383.1|AF271383 Zea mays indole-3-glycerol phosphate lyase (Igl) gene, complete cds; and putative tryptophan synthase alpha (TSAlike) gene, partial cds Length = 6644 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 267 tggggagcggatggtgtgattattggcagtgcaatcgttagacagttgggcgaagccgct 326 ||||| || ||||||||||| ||||| || ||||| || |||||||| |||||||| || Sbjct: 1728 tggggtgcagatggtgtgatcattggtagcgcaatggtgagacagttaggcgaagcagcc 1787 Query: 327 tctcc 331 ||||| Sbjct: 1788 tctcc 1792
>dbj|AP006680.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45D03, TM0375a, complete sequence Length = 58157 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 267 tggggagcggatggtgtgattattggcagtgc 298 |||||||| |||||||||||| |||||||||| Sbjct: 49507 tggggagctgatggtgtgattgttggcagtgc 49538
>emb|AL138656.2|ATT14E10 Arabidopsis thaliana DNA chromosome 3, BAC clone T14E10 Length = 94911 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 45 ctacttacaacaccaaccacaccaacagagaggatgaag 83 ||||| || ||||||||||||||||||||| | |||||| Sbjct: 92672 ctactcactacaccaaccacaccaacagagcgaatgaag 92634
>emb|AJ841705.1| Isatis tinctoria tsa gene for tryptophan synthase, alpha subunit (TSA1), exons 1-8 Length = 2132 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 45 ctacttacaacaccaaccacaccaacagagaggatgaag 83 ||||| || ||||||||||||||||||||| | |||||| Sbjct: 1450 ctactcactacaccaaccacaccaacagagcgaatgaag 1488
>emb|BX825994.1|CNS0A6C0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL77ZH07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 695 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 45 ctacttacaacaccaaccacaccaacagagaggatgaag 83 ||||| || ||||||||||||||||||||| | |||||| Sbjct: 244 ctactcactacaccaaccacaccaacagagcgaatgaag 282
>gb|U18993.1|ATU18993 Arabidopsis thaliana tryptophan synthase alpha chain (TSA1) gene, complete cds Length = 5035 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 45 ctacttacaacaccaaccacaccaacagagaggatgaag 83 ||||| || ||||||||||||||||||||| | |||||| Sbjct: 3107 ctactcactacaccaaccacaccaacagagcgaatgaag 3145
>gb|M98815.1|MOCREPSEQB Molluscum contagiosum virus DNA Length = 4107 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 101 agaaggattcgtttatcttgtgagtgc 127 ||||||||||||||||| ||||||||| Sbjct: 3674 agaaggattcgtttatcgtgtgagtgc 3648
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 535 tgttagaatcacaatatgaatt 556 |||||||||||||||||||||| Sbjct: 6923 tgttagaatcacaatatgaatt 6902
>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10, complete sequence Length = 148373 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 535 tgttagaatcacaatatgaatt 556 |||||||||||||||||||||| Sbjct: 56155 tgttagaatcacaatatgaatt 56134
>emb|CR382279.1| M.truncatula DNA sequence from clone MTH2-15G18 on chromosome 3, complete sequence Length = 140041 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 520 aattatatatttgtgtgttagaatca 545 ||||||| |||||||||||||||||| Sbjct: 66994 aattataaatttgtgtgttagaatca 67019
>gb|AC145219.16| Medicago truncatula clone mth2-6m1, complete sequence Length = 140462 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 520 aattatatatttgtgtgttagaatca 545 ||||||| |||||||||||||||||| Sbjct: 130737 aattataaatttgtgtgttagaatca 130762
>gb|DQ366742.1| Uncultured Prochlorococcus marinus clone HOT0M-8E2 genomic sequence Length = 30260 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 216 gctgttggctttggcatatcaactccagagcatg 249 |||||||| ||||| |||||||||||||| |||| Sbjct: 21062 gctgttggttttggaatatcaactccagaacatg 21095
>gb|AY059631.1| Medicago truncatula phosphoinositide-specific phospholipase C (PLC1) gene, complete cds Length = 6443 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 520 aattatatatttgtgtgttagaatca 545 ||||||| |||||||||||||||||| Sbjct: 2072 aattataaatttgtgtgttagaatca 2097
>gb|AC149131.3| Medicago truncatula chromosome 7 BAC clone mth2-19e15, complete sequence Length = 122492 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 520 aattatatatttgtgtgttagaatca 545 ||||||| |||||||||||||||||| Sbjct: 36665 aattataaatttgtgtgttagaatca 36690
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 535 tgttagaatcacaatatgaatt 556 |||||||||||||||||||||| Sbjct: 17062788 tgttagaatcacaatatgaatt 17062767
>gb|AC162389.6| Mus musculus 6 BAC RP24-114M8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 189477 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 caaacctgtggctgttggctttggc 230 |||||||||||||||||| |||||| Sbjct: 53964 caaacctgtggctgttgggtttggc 53940
>emb|AL139276.17| Human DNA sequence from clone RP11-30M20 on chromosome Xq11.2-13.1 Contains a novel pseudogene and a eukaryotic translation initiation factor 4B (EIF4B) pseudogene, complete sequence Length = 83401 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 515 aaaacaattatatatttgtgt 535 ||||||||||||||||||||| Sbjct: 6650 aaaacaattatatatttgtgt 6670
>emb|AL136133.14| Human DNA sequence from clone CTA-253N17 on chromosome 1 Contains the 5' end of the C1orf25 gene for chromosome 1 open reading frame 25, the 5' end of the C1orf26 gene for chromosome 1 open reading frame 26 and a CpG island, complete sequence Length = 85565 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 ctgaagaaggactgagaagaa 351 ||||||||||||||||||||| Sbjct: 79259 ctgaagaaggactgagaagaa 79239
>gb|AC160397.9| Mus musculus 6 BAC RP23-279I21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 173003 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 caaacctgtggctgttggctttggc 230 |||||||||||||||||| |||||| Sbjct: 25701 caaacctgtggctgttgggtttggc 25725
>emb|AL139194.7|CNS01DXB Human chromosome 14 DNA sequence BAC C-2190G12 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157120 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 gaaatcacaaaagcttcagaa 104 ||||||||||||||||||||| Sbjct: 45173 gaaatcacaaaagcttcagaa 45153
>ref|XM_635127.1| Dictyostelium discoideum hypothetical protein (DDB0214900), partial mRNA Length = 8037 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 acttacaacaccaaccacaccaac 70 |||| ||||||||||||||||||| Sbjct: 6810 actttcaacaccaaccacaccaac 6833
>gb|DQ213694.1| Taeniopygia guttata clone 0058P0058F04 phosphopantothenate-cysteine ligase-like mRNA, complete sequence Length = 1287 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 tgaaggaaatcacaaaagcttcag 102 |||||||||||||||| ||||||| Sbjct: 717 tgaaggaaatcacaaaggcttcag 694
>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ccagagcatgcgaagcagat 259 |||||||||||||||||||| Sbjct: 51053 ccagagcatgcgaagcagat 51072
>gb|AC146423.3| Pan troglodytes BAC clone RP43-25L18 from 7, complete sequence Length = 158864 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 gtttctcatttcccttttga 588 |||||||||||||||||||| Sbjct: 56987 gtttctcatttcccttttga 56968
>gb|AC148833.5| Pan troglodytes BAC clone CH251-55M19 from chromosome 7, complete sequence Length = 206418 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 gtttctcatttcccttttga 588 |||||||||||||||||||| Sbjct: 104065 gtttctcatttcccttttga 104046
>ref|XM_451861.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B07469g predicted mRNA Length = 2637 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gatgaaggaaatcacaaaag 96 |||||||||||||||||||| Sbjct: 816 gatgaaggaaatcacaaaag 835
>gb|AC012441.3| Homo sapiens BAC clone CTD-2021A8 from 7, complete sequence Length = 70184 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 gtttctcatttcccttttga 588 |||||||||||||||||||| Sbjct: 8028 gtttctcatttcccttttga 8009
>emb|CR751605.10| Zebrafish DNA sequence from clone DKEY-25J15 in linkage group 14, complete sequence Length = 145610 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 tcaaaacaattatatatttg 532 |||||||||||||||||||| Sbjct: 26928 tcaaaacaattatatatttg 26947
>gb|AC131722.4| Mus musculus BAC clone RP23-143M5 from chromosome 9, complete sequence Length = 228144 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 tatatatttgtgtgttagaa 542 |||||||||||||||||||| Sbjct: 210219 tatatatttgtgtgttagaa 210200
>emb|Z69787.1|CEC44C10 Caenorhabditis elegans Cosmid C44C10, complete sequence Length = 35409 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 464 tcggtggacctggaatctgtaatt 487 |||||||||| ||||||||||||| Sbjct: 24168 tcggtggaccgggaatctgtaatt 24191
>gb|AC117258.2| Mus musculus BAC clone RP24-491P21 from X, complete sequence Length = 161458 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 ggaaatcacaaaagcttcagaagg 106 ||||||||||| |||||||||||| Sbjct: 72923 ggaaatcacaacagcttcagaagg 72900
>gb|AF068714.1| Caenorhabditis elegans cosmid B0348, complete sequence Length = 45125 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 520 aattatatatttgtgtgttagaat 543 ||||||||||||| |||||||||| Sbjct: 38653 aattatatatttgagtgttagaat 38676
>gb|AC137836.25| Medicago truncatula clone mth2-10f14, complete sequence Length = 140197 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 cacaatatgaattaacaagg 563 |||||||||||||||||||| Sbjct: 135206 cacaatatgaattaacaagg 135225
>emb|AL513016.5| Human DNA sequence from clone RP11-474O21 on chromosome 1 Contains the 5' end of the gene for short-chain dehydrogenase/reductase 1 (SDR1), two genes for novel proteins similar to esterases, a ribosomal protein L23a (RPL23A) pseudogene, the gene for a novel protein (MGC35194) and a CpG island, complete sequence Length = 150720 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 aaccacaccaacagagagga 78 |||||||||||||||||||| Sbjct: 78067 aaccacaccaacagagagga 78048
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gatgaaggaaatcacaaaag 96 |||||||||||||||||||| Sbjct: 647467 gatgaaggaaatcacaaaag 647448
>emb|AL929358.1|PFA929358 Plasmodium falciparum strain 3D7, chromosome 9; segment 4/5 Length = 254050 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 ttatatatttgtgtgttaga 541 |||||||||||||||||||| Sbjct: 35621 ttatatatttgtgtgttaga 35640
>emb|CR855878.5| Human DNA sequence from clone RP13-469P20 on chromosome 1, complete sequence Length = 225410 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 aaccacaccaacagagagga 78 |||||||||||||||||||| Sbjct: 78100 aaccacaccaacagagagga 78081
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 397 ggcagttccatcatgaacaagcca 420 |||||| ||||||||||||||||| Sbjct: 327926 ggcagtgccatcatgaacaagcca 327949
>gb|AC009987.17| Homo sapiens chromosome 10 clone RP11-391M7, complete sequence Length = 196808 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ccgcttctcctgaagaagga 341 |||||||||||||||||||| Sbjct: 101627 ccgcttctcctgaagaagga 101608
>gb|AC108515.3| Homo sapiens BAC clone RP11-431J17 from 4, complete sequence Length = 90286 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctgagaagaatagaagagta 361 |||||||||||||||||||| Sbjct: 18818 ctgagaagaatagaagagta 18837
>gb|AC153359.4| Mus musculus BAC clone RP23-477I1 from chromosome 9, complete sequence Length = 195269 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 tatatatttgtgtgttagaa 542 |||||||||||||||||||| Sbjct: 122690 tatatatttgtgtgttagaa 122709
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ccagagcatgcgaagcagat 259 |||||||||||||||||||| Sbjct: 2398956 ccagagcatgcgaagcagat 2398975
>gb|AC009302.2| Homo sapiens BAC clone RP11-71J24 from 2, complete sequence Length = 180970 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 acaattatatatttgtgtgt 537 |||||||||||||||||||| Sbjct: 152862 acaattatatatttgtgtgt 152843
>dbj|AK102457.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094B15, full insert sequence Length = 1773 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ccagagcatgcgaagcagat 259 |||||||||||||||||||| Sbjct: 486 ccagagcatgcgaagcagat 467
>gb|AY376576.1| Colletotrichum coccodes strain STE-U 5301 beta-tubulin-2 (tub2) gene, exons 2 through 6 and partial cds Length = 694 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 catcttcttcaggagatcaa 193 |||||||||||||||||||| Sbjct: 305 catcttcttcaggagatcaa 286
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ccagagcatgcgaagcagat 259 |||||||||||||||||||| Sbjct: 2406692 ccagagcatgcgaagcagat 2406711
>dbj|AB030033.1| Dictyostelium discoideum gene for AmiB, complete cds Length = 9211 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 acttacaacaccaaccacaccaac 70 |||| ||||||||||||||||||| Sbjct: 7362 actttcaacaccaaccacaccaac 7385 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,825,741 Number of Sequences: 3902068 Number of extensions: 5825741 Number of successful extensions: 117709 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117274 Number of HSP's gapped (non-prelim): 427 length of query: 600 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 577 effective length of database: 17,143,297,704 effective search space: 9891682775208 effective search space used: 9891682775208 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
