ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd25b14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104181.1| Zea mays PCO060230 mRNA sequence Length = 1061 Score = 460 bits (232), Expect = e-126 Identities = 394/448 (87%) Strand = Plus / Plus Query: 100 cgatgacgctgggcagctccggcgccggatcgagcgtcgtcgttcctcggaacttcaggc 159 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 264 cgatgacgctgggtagctccggcgccggatcgagcgtcgtcgttcctcgaaacttcaggc 323 Query: 160 tgctagaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaa 219 | |||| ||||| ||||| || |||||||||||||| ||||| || || |||||||||| Sbjct: 324 tattagaggagctcgagcgtggagagaagggcattggtgatgggacagtgagctatggaa 383 Query: 220 tggatgatgctgatgacatatacatgcggtcatggactggcaccattattggtcctcaca 279 ||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 384 tggatgatgctgatgacatctacatgcggtcatggactggtaccatcattggccctcaca 443 Query: 280 atactgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctg 339 ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| || | Sbjct: 444 atactgtacatgagggtcgcatctaccagctgaagttgttttgtgacaaggactatccgg 503 Query: 340 agaaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgaga 399 ||||| |||||||||| |||||||| ||||||||||||||| | || ||||||||||||| Sbjct: 504 agaagccaccatctgtcagattccactcaagaatcaacatgacatgcgttaatcacgaga 563 Query: 400 ccggggcggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaa 459 | || |||||| || | |||||| || ||||||| ||||||||||| || ||||| | Sbjct: 564 caggaatggttgatccaaggaagtttggtttgctagcgaactggcagcgggactacacga 623 Query: 460 tggagcatgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaagctag 519 ||||| | || | |||||||| |||||||| ||||| || | ||||| || ||| ||| Sbjct: 624 tggagaacatcctcacccagctcaagaaagagatggctgcctcgcagaatcgaaagttag 683 Query: 520 tgcagcctccagaagggacattcttcta 547 |||||||||||||||||||||||||||| Sbjct: 684 tgcagcctccagaagggacattcttcta 711
>dbj|AK104965.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C07, full insert sequence Length = 833 Score = 456 bits (230), Expect = e-125 Identities = 398/454 (87%) Strand = Plus / Plus Query: 95 atcgacgatgacgctgggcagctccggcgccggatcgagcgtcgtcgttcctcggaactt 154 |||| ||||||||||||| |||||||||||||||||||||||||||||||| || ||||| Sbjct: 52 atcggcgatgacgctggggagctccggcgccggatcgagcgtcgtcgttccgcgaaactt 111 Query: 155 caggctgctagaagagcttgagcgcggggagaagggcattggagatggaactgtcagcta 214 |||| |||||||||||||||| || || || |||||||||||||||||||| || ||||| Sbjct: 112 caggttgctagaagagcttgaacgtggtgaaaagggcattggagatggaaccgtgagcta 171 Query: 215 tggaatggatgatgctgatgacatatacatgcggtcatggactggcaccattattggtcc 274 ||||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 172 tggaatggatgatgcagatgacatctacatgcggtcttggactggcaccatcattggtcc 231 Query: 275 tcacaatactgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggacta 334 || |||| ||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 232 acataatagtgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaaggacta 291 Query: 335 ccctgagaaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatca 394 ||| |||||| |||||||||| | || |||||||||||||| ||| | ||||||||||| Sbjct: 292 cccagagaagccaccatctgtccggtttcattcaagaatcaatatgtcgtgtgttaatca 351 Query: 395 cgagaccggggcggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagta 454 ||||| || ||||||||| ||| |||||| |||| ||||||||||||||||| ||||| Sbjct: 352 tgagactggagcggttgactcgaggaagtttggtgttctagcaaactggcagcgcgagta 411 Query: 455 cacaatggagcatgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaa 514 ||| |||||| | || | |||||||| ||||| || |||||| | | ||||| ||||| Sbjct: 412 caccatggagactatccttacccagctcaagaaggagatggcaaccccgcagaatcgcaa 471 Query: 515 gctagtgcagcctccagaagggacattcttctag 548 | | ||||| |||||||||||||| ||||||||| Sbjct: 472 gttggtgcaacctccagaagggacgttcttctag 505
>dbj|AK073729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033054B21, full insert sequence Length = 853 Score = 456 bits (230), Expect = e-125 Identities = 398/454 (87%) Strand = Plus / Plus Query: 95 atcgacgatgacgctgggcagctccggcgccggatcgagcgtcgtcgttcctcggaactt 154 |||| ||||||||||||| |||||||||||||||||||||||||||||||| || ||||| Sbjct: 103 atcggcgatgacgctggggagctccggcgccggatcgagcgtcgtcgttccgcgaaactt 162 Query: 155 caggctgctagaagagcttgagcgcggggagaagggcattggagatggaactgtcagcta 214 |||| |||||||||||||||| || || || |||||||||||||||||||| || ||||| Sbjct: 163 caggttgctagaagagcttgaacgtggtgaaaagggcattggagatggaaccgtgagcta 222 Query: 215 tggaatggatgatgctgatgacatatacatgcggtcatggactggcaccattattggtcc 274 ||||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 223 tggaatggatgatgcagatgacatctacatgcggtcttggactggcaccatcattggtcc 282 Query: 275 tcacaatactgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggacta 334 || |||| ||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 283 acataatagtgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaaggacta 342 Query: 335 ccctgagaaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatca 394 ||| |||||| |||||||||| | || |||||||||||||| ||| | ||||||||||| Sbjct: 343 cccagagaagccaccatctgtccggtttcattcaagaatcaatatgtcgtgtgttaatca 402 Query: 395 cgagaccggggcggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagta 454 ||||| || ||||||||| ||| |||||| |||| ||||||||||||||||| ||||| Sbjct: 403 tgagactggagcggttgactcgaggaagtttggtgttctagcaaactggcagcgcgagta 462 Query: 455 cacaatggagcatgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaa 514 ||| |||||| | || | |||||||| ||||| || |||||| | | ||||| ||||| Sbjct: 463 caccatggagactatccttacccagctcaagaaggagatggcaaccccgcagaatcgcaa 522 Query: 515 gctagtgcagcctccagaagggacattcttctag 548 | | ||||| |||||||||||||| ||||||||| Sbjct: 523 gttggtgcaacctccagaagggacgttcttctag 556
>gb|BT017181.1| Zea mays clone EL01N0369E04.c mRNA sequence Length = 822 Score = 452 bits (228), Expect = e-124 Identities = 393/448 (87%) Strand = Plus / Plus Query: 100 cgatgacgctgggcagctccggcgccggatcgagcgtcgtcgttcctcggaacttcaggc 159 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 145 cgatgacgctgggtagctccggcgccggatcgagcgtcgtcgttcctcgaaacttcaggc 204 Query: 160 tgctagaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaa 219 | |||| ||||| ||||| || |||||||||||||| ||||| || || |||||||||| Sbjct: 205 tattagaggagctcgagcgtggagagaagggcattggtgatgggacagtgagctatggaa 264 Query: 220 tggatgatgctgatgacatatacatgcggtcatggactggcaccattattggtcctcaca 279 ||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 265 tggatgatgctgatgacatctacatgcggtcatggactggtaccatcattggccctcaca 324 Query: 280 atactgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctg 339 ||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||| || | Sbjct: 325 atactgtacatgagggtcgcatctaccagctgaagttgttttgtgacaaagactatccgg 384 Query: 340 agaaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgaga 399 ||||| |||||||||| |||||||| ||||||||||||||| | || ||||||||||||| Sbjct: 385 agaagccaccatctgtcagattccactcaagaatcaacatgacatgcgttaatcacgaga 444 Query: 400 ccggggcggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaa 459 | || |||||| || | |||||| || ||||||| ||||||||||| || ||||| | Sbjct: 445 caggaatggttgatccaaggaagtttggtttgctagcgaactggcagcgggactacacga 504 Query: 460 tggagcatgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaagctag 519 ||||| | || | |||||||| |||||||| ||||| || | ||||| || ||| ||| Sbjct: 505 tggagaacatcctaacccagctcaagaaagagatggctgcctcgcagaatcgaaagttag 564 Query: 520 tgcagcctccagaagggacattcttcta 547 |||||||||||||||||||||||||||| Sbjct: 565 tgcagcctccagaagggacattcttcta 592
>gb|AY103581.1| Zea mays PCO136340 mRNA sequence Length = 1242 Score = 392 bits (198), Expect = e-106 Identities = 384/446 (86%) Strand = Plus / Plus Query: 102 atgacgctgggcagctccggcgccggatcgagcgtcgtcgttcctcggaacttcaggctg 161 ||||||| ||| ||||| | ||||||||| |||||||||||||||||||||||||||| Sbjct: 160 atgacgccgggaagctcggccgccggatccggcgtcgtcgttcctcggaacttcaggctc 219 Query: 162 ctagaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatg 221 |||||||||||||| || || |||||||||||||||||||| || || |||||||||||| Sbjct: 220 ctagaagagcttgaacgtggagagaagggcattggagatgggacagtgagctatggaatg 279 Query: 222 gatgatgctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaat 281 ||||| || |||||||| |||||||| |||||||||||||| |||||||| ||||| ||| Sbjct: 280 gatgacgcagatgacatctacatgcgatcatggactggcactattattggccctcataat 339 Query: 282 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 341 || |||||||||||||||||||||||||||||| |||| || |||||||||||||||||| Sbjct: 340 accgtccatgagggtcgcatctaccagctgaagttgttctgcgacaaggactaccctgag 399 Query: 342 aaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagacc 401 ||| ||||||| ||| |||| ||||||||||| ||| | | || |||||||| || || Sbjct: 400 aagccaccatcagttcgatttcattcaagaataaacttaacatgcgttaatcatgaaact 459 Query: 402 ggggcggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatg 461 || | ||||||||||||||||||||| || || | ||||||||||| || ||| ||||| Sbjct: 460 ggagtggttgacccgaagaagttcagcgttctgggtaactggcagcgtgattactcaatg 519 Query: 462 gagcatgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaagctagtg 521 || | || | ||||| || |||||||| ||| || || | ||||||||||||||||| Sbjct: 520 gaatacatcctaacccatctcaagaaagagatgacatcgccacagaaccgcaagctagtt 579 Query: 522 cagcctccagaagggacattcttcta 547 |||||||| ||||||||||||||||| Sbjct: 580 cagcctccggaagggacattcttcta 605
>gb|BT016303.1| Zea mays clone Contig136 mRNA sequence Length = 790 Score = 385 bits (194), Expect = e-103 Identities = 383/446 (85%) Strand = Plus / Plus Query: 102 atgacgctgggcagctccggcgccggatcgagcgtcgtcgttcctcggaacttcaggctg 161 ||||||| ||| ||||| | ||||||||| |||||||||||||||||||||||||||| Sbjct: 74 atgacgccgggaagctcggccgccggatccggcgtcgtcgttcctcggaacttcaggctc 133 Query: 162 ctagaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatg 221 |||||||||||||| || || |||||||||||||||||||| || || |||||||||||| Sbjct: 134 ctagaagagcttgaacgtggagagaagggcattggagatgggacagtgagctatggaatg 193 Query: 222 gatgatgctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaat 281 ||||| || |||||||| |||||||| |||||||||||||| |||||||| ||||| ||| Sbjct: 194 gatgacgcagatgacatctacatgcgatcatggactggcactattattggccctcataat 253 Query: 282 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 341 || |||||||||||||||||||||||||||||| |||| || |||||||||||||||||| Sbjct: 254 accgtccatgagggtcgcatctaccagctgaagttgttctgcgacaaggactaccctgag 313 Query: 342 aaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagacc 401 ||| ||||||| ||| |||| ||||||||||| ||| | | || |||||||| || || Sbjct: 314 aagccaccatcagttcgatttcattcaagaataaacttaacatgcgttaatcatgaaact 373 Query: 402 ggggcggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatg 461 || | ||||||||||||||||||||| || || | ||||||||||| || || ||||| Sbjct: 374 ggagtggttgacccgaagaagttcagcgttctgggtaactggcagcgtgattattcaatg 433 Query: 462 gagcatgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaagctagtg 521 || | || | ||||| || |||||||| ||| || || | ||||||||||||||||| Sbjct: 434 gaatacatcctaacccatctcaagaaagagatgacatcgccacagaaccgcaagctagtt 493 Query: 522 cagcctccagaagggacattcttcta 547 |||||||| ||||||||||||||||| Sbjct: 494 cagcctccggaagggacattcttcta 519
>dbj|AK068060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130B07, full insert sequence Length = 924 Score = 242 bits (122), Expect = 1e-60 Identities = 341/414 (82%) Strand = Plus / Plus Query: 135 gtcgtcgttcctcggaacttcaggctgctagaagagcttgagcgcggggagaagggcatt 194 |||||||| ||| |||||||||| |||||||||||||||||| | |||||||||||||| Sbjct: 229 gtcgtcgtgcctaggaacttcagactgctagaagagcttgagagaggggagaagggcatc 288 Query: 195 ggagatggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatgg 254 || |||||| | || |||||||||||||||||||| || || || |||||||| || ||| Sbjct: 289 ggtgatggatcagtaagctatggaatggatgatgcagacgatatctacatgcgctcttgg 348 Query: 255 actggcaccattattggtcctcacaatactgtccatgagggtcgcatctaccagctgaag 314 || ||||| ||||||||||| || || |||||||||||||| || || ||||| |||||| Sbjct: 349 acaggcacaattattggtccccataacactgtccatgagggccggatataccaactgaag 408 Query: 315 ctgttttgtgacaaggactaccctgagaaggcaccatctgttagattccattcaagaatc 374 || || || |||||||||||||| || | | ||||| |||| | ||| || ||||||||| Sbjct: 409 cttttctgcgacaaggactacccagacaggccaccaactgtaaaatttcactcaagaatc 468 Query: 375 aacatggcttgtgttaatcacgagaccggggcggttgacccgaagaagttcagtgtgcta 434 |||||| | ||||| || | |||| || |||||||| | ||||||||| || | Sbjct: 469 aacatgacctgtgtaaacccagagaatggattggttgaccaaaggaagttcagcctgttg 528 Query: 435 gcaaactggcagcgagagtacacaatggagcatgtcttgacccagctgaagaaagacatg 494 |||| |||| || ||||||||||||||| | |||||||||| || |||||||| ||| Sbjct: 529 tcaaattggcgccgcgagtacacaatggaggctatcttgacccaacttaagaaagagatg 588 Query: 495 gcagcgacccagaaccgcaagctagtgcagcctccagaagggacattcttctag 548 ||||| | || ||||| || ||||||||||||||||| ||||||||||||||| Sbjct: 589 gcagcatcacacaaccggaaactagtgcagcctccagaggggacattcttctag 642
>gb|DQ160040.1| Taraxacum officinale TO38-23 (To38-23) mRNA, partial cds Length = 475 Score = 186 bits (94), Expect = 5e-44 Identities = 241/290 (83%) Strand = Plus / Plus Query: 135 gtcgtcgttcctcggaacttcaggctgctagaagagcttgagcgcggggagaagggcatt 194 ||||| || |||||||| ||||| |||| || ||||||||||| || || ||||| || Sbjct: 6 gtcgtggtgcctcggaatttcagattgctggaggagcttgagcgtggagaaaagggtatc 65 Query: 195 ggagatggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatgg 254 |||||||| ||||| ||||||||||||||||||| |||||| || || ||||| |||||| Sbjct: 66 ggagatggcactgtgagctatggaatggatgatggtgatgatatctatatgcgatcatgg 125 Query: 255 actggcaccattattggtcctcacaatactgtccatgagggtcgcatctaccagctgaag 314 || |||||||| || || ||||||||| |||| |||||||||||||||||||| ||||| Sbjct: 126 acaggcaccatcatcggccctcacaattctgtgcatgagggtcgcatctaccaattgaag 185 Query: 315 ctgttttgtgacaaggactaccctgagaaggcaccatctgttagattccattcaagaatc 374 || ||||||||||| || |||||||||||| | ||| |||| | |||||||| | || Sbjct: 186 ctattttgtgacaaagattaccctgagaagcctccaactgtccgtttccattctcgggtc 245 Query: 375 aacatggcttgtgttaatcacgagaccggggcggttgacccgaagaagtt 424 |||||| ||||||| || || || ||||| | ||| || ||||||||||| Sbjct: 246 aacatgacttgtgtcaaccatgaaaccggagtggtggaaccgaagaagtt 295
>ref|NM_115116.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT3G52560 transcript variant AT3G52560.1 mRNA, complete cds Length = 864 Score = 176 bits (89), Expect = 5e-41 Identities = 245/297 (82%) Strand = Plus / Plus Query: 168 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 227 |||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 187 gagcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgat 246 Query: 228 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtc 287 | |||||||| || ||||| || |||||||||||||| || ||||||||||| ||||| Sbjct: 247 ggagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaacactgtt 306 Query: 288 catgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaaggca 347 ||||| ||| | ||||| ||| ||||||| ||||||||||| || ||||| ||||| | Sbjct: 307 catgaaggtagaatctatcagttgaagctcttttgtgacaaagattacccggagaaacct 366 Query: 348 ccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccggggcg 407 ||| |||| ||||||||||| | |||||||||||||||| || ||||| || || | | Sbjct: 367 ccaactgtccgattccattcacgtgtcaacatggcttgtgtcaaccacgaaacaggagtg 426 Query: 408 gttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggag 464 || || || ||||| || | | || ||||||||||| ||||||||||||||||| Sbjct: 427 gtggatcctaagaaatttgggctacttgcaaactggcaaagagagtacacaatggag 483
>gb|AY072492.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 587 Score = 176 bits (89), Expect = 5e-41 Identities = 245/297 (82%) Strand = Plus / Plus Query: 168 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 227 |||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 61 gagcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgat 120 Query: 228 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtc 287 | |||||||| || ||||| || |||||||||||||| || ||||||||||| ||||| Sbjct: 121 ggagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaacactgtt 180 Query: 288 catgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaaggca 347 ||||| ||| | ||||| ||| ||||||| ||||||||||| || ||||| ||||| | Sbjct: 181 catgaaggtagaatctatcagttgaagctcttttgtgacaaagattacccggagaaacct 240 Query: 348 ccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccggggcg 407 ||| |||| ||||||||||| | |||||||||||||||| || ||||| || || | | Sbjct: 241 ccaactgtccgattccattcacgtgtcaacatggcttgtgtcaaccacgaaacaggagtg 300 Query: 408 gttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggag 464 || || || ||||| || | | || ||||||||||| ||||||||||||||||| Sbjct: 301 gtggatcctaagaaatttgggctacttgcaaactggcaaagagagtacacaatggag 357
>gb|AY042846.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 810 Score = 176 bits (89), Expect = 5e-41 Identities = 245/297 (82%) Strand = Plus / Plus Query: 168 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 227 |||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 136 gagcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgat 195 Query: 228 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtc 287 | |||||||| || ||||| || |||||||||||||| || ||||||||||| ||||| Sbjct: 196 ggagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaacactgtt 255 Query: 288 catgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaaggca 347 ||||| ||| | ||||| ||| ||||||| ||||||||||| || ||||| ||||| | Sbjct: 256 catgaaggtagaatctatcagttgaagctcttttgtgacaaagattacccggagaaacct 315 Query: 348 ccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccggggcg 407 ||| |||| ||||||||||| | |||||||||||||||| || ||||| || || | | Sbjct: 316 ccaactgtccgattccattcacgtgtcaacatggcttgtgtcaaccacgaaacaggagtg 375 Query: 408 gttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggag 464 || || || ||||| || | | || ||||||||||| ||||||||||||||||| Sbjct: 376 gtggatcctaagaaatttgggctacttgcaaactggcaaagagagtacacaatggag 432
>emb|BX825709.1|CNS0A69P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL58ZC12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 838 Score = 176 bits (89), Expect = 5e-41 Identities = 245/297 (82%) Strand = Plus / Plus Query: 168 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 227 |||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 162 gagcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgat 221 Query: 228 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtc 287 | |||||||| || ||||| || |||||||||||||| || ||||||||||| ||||| Sbjct: 222 ggagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaacactgtt 281 Query: 288 catgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaaggca 347 ||||| ||| | ||||| ||| ||||||| ||||||||||| || ||||| ||||| | Sbjct: 282 catgaaggtagaatctatcagttgaagctcttttgtgacaaagattacccggagaaacct 341 Query: 348 ccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccggggcg 407 ||| |||| ||||||||||| | |||||||||||||||| || ||||| || || | | Sbjct: 342 ccaactgtccgattccattcacgtgtcaacatggcttgtgtcaaccacgaaacaggagtg 401 Query: 408 gttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggag 464 || || || ||||| || | | || ||||||||||| ||||||||||||||||| Sbjct: 402 gtggatcctaagaaatttgggctacttgcaaactggcaaagagagtacacaatggag 458
>ref|NM_129165.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT2G36060 transcript variant AT2G36060.1 mRNA, complete cds Length = 837 Score = 172 bits (87), Expect = 8e-40 Identities = 276/339 (81%) Strand = Plus / Plus Query: 126 ggatcgagcgtcgtcgttcctcggaacttcaggctgctagaagagcttgagcgcggggag 185 |||||||| || |||||||| |||| ||| || |||| || |||||||| || || ||| Sbjct: 200 ggatcgagtgttgtcgttccgaggaatttccggttgctggaggagcttgaacgtggagag 259 Query: 186 aagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatacatg 245 || || ||||||||||||||||| ||||||||||||||||||| |||||||| || ||| Sbjct: 260 aaaggtattggagatggaactgtgagctatggaatggatgatggagatgacatttatatg 319 Query: 246 cggtcatggactggcaccattattggtcctcacaatactgtccatgagggtcgcatctac 305 || || ||||||||||| || || ||||||||||| ||||| ||||||||||| || || Sbjct: 320 cgctcttggactggcactatcatcggtcctcacaacactgtacatgagggtcggatttat 379 Query: 306 cagctgaagctgttttgtgacaaggactaccctgagaaggcaccatctgttagattccat 365 ||| ||||||| || |||||||| || ||||||||||| | || ||||| | |||||| Sbjct: 380 cagttgaagctcttctgtgacaaagattaccctgagaaacctccgactgttcggttccat 439 Query: 366 tcaagaatcaacatggcttgtgttaatcacgagaccggggcggttgacccgaagaagttc 425 || | ||||||||| ||||||| || || || ||||| | ||| || | |||||||| Sbjct: 440 tcgcgtatcaacatgacttgtgtcaaccatgataccggcgtggtggattcaaagaagttt 499 Query: 426 agtgtgctagcaaactggcagcgagagtacacaatggag 464 | || || ||||||||||| || |||||||||||||| Sbjct: 500 ggggttcttgcaaactggcaaagacagtacacaatggag 538
>gb|AY093382.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme (At2g36060) mRNA, complete cds Length = 531 Score = 172 bits (87), Expect = 8e-40 Identities = 276/339 (81%) Strand = Plus / Plus Query: 126 ggatcgagcgtcgtcgttcctcggaacttcaggctgctagaagagcttgagcgcggggag 185 |||||||| || |||||||| |||| ||| || |||| || |||||||| || || ||| Sbjct: 16 ggatcgagtgttgtcgttccgaggaatttccggttgctggaggagcttgaacgtggagag 75 Query: 186 aagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatacatg 245 || || ||||||||||||||||| ||||||||||||||||||| |||||||| || ||| Sbjct: 76 aaaggtattggagatggaactgtgagctatggaatggatgatggagatgacatttatatg 135 Query: 246 cggtcatggactggcaccattattggtcctcacaatactgtccatgagggtcgcatctac 305 || || ||||||||||| || || ||||||||||| ||||| ||||||||||| || || Sbjct: 136 cgctcttggactggcactatcatcggtcctcacaacactgtacatgagggtcggatttat 195 Query: 306 cagctgaagctgttttgtgacaaggactaccctgagaaggcaccatctgttagattccat 365 ||| ||||||| || |||||||| || ||||||||||| | || ||||| | |||||| Sbjct: 196 cagttgaagctcttctgtgacaaagattaccctgagaaacctccgactgttcggttccat 255 Query: 366 tcaagaatcaacatggcttgtgttaatcacgagaccggggcggttgacccgaagaagttc 425 || | ||||||||| ||||||| || || || ||||| | ||| || | |||||||| Sbjct: 256 tcgcgtatcaacatgacttgtgtcaaccatgataccggcgtggtggattcaaagaagttt 315 Query: 426 agtgtgctagcaaactggcagcgagagtacacaatggag 464 | || || ||||||||||| || |||||||||||||| Sbjct: 316 ggggttcttgcaaactggcaaagacagtacacaatggag 354
>gb|AY062760.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme (At2g36060; F11F19.3) mRNA, complete cds Length = 769 Score = 172 bits (87), Expect = 8e-40 Identities = 276/339 (81%) Strand = Plus / Plus Query: 126 ggatcgagcgtcgtcgttcctcggaacttcaggctgctagaagagcttgagcgcggggag 185 |||||||| || |||||||| |||| ||| || |||| || |||||||| || || ||| Sbjct: 134 ggatcgagtgttgtcgttccgaggaatttccggttgctggaggagcttgaacgtggagag 193 Query: 186 aagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatacatg 245 || || ||||||||||||||||| ||||||||||||||||||| |||||||| || ||| Sbjct: 194 aaaggtattggagatggaactgtgagctatggaatggatgatggagatgacatttatatg 253 Query: 246 cggtcatggactggcaccattattggtcctcacaatactgtccatgagggtcgcatctac 305 || || ||||||||||| || || ||||||||||| ||||| ||||||||||| || || Sbjct: 254 cgctcttggactggcactatcatcggtcctcacaacactgtacatgagggtcggatttat 313 Query: 306 cagctgaagctgttttgtgacaaggactaccctgagaaggcaccatctgttagattccat 365 ||| ||||||| || |||||||| || ||||||||||| | || ||||| | |||||| Sbjct: 314 cagttgaagctcttctgtgacaaagattaccctgagaaacctccgactgttcggttccat 373 Query: 366 tcaagaatcaacatggcttgtgttaatcacgagaccggggcggttgacccgaagaagttc 425 || | ||||||||| ||||||| || || || ||||| | ||| || | |||||||| Sbjct: 374 tcgcgtatcaacatgacttgtgtcaaccatgataccggcgtggtggattcaaagaagttt 433 Query: 426 agtgtgctagcaaactggcagcgagagtacacaatggag 464 | || || ||||||||||| || |||||||||||||| Sbjct: 434 ggggttcttgcaaactggcaaagacagtacacaatggag 472
>gb|AY085609.1| Arabidopsis thaliana clone 16125 mRNA, complete sequence Length = 832 Score = 168 bits (85), Expect = 1e-38 Identities = 244/297 (82%) Strand = Plus / Plus Query: 168 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 227 |||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 188 gagcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgat 247 Query: 228 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtc 287 | |||||||| || ||||| || ||||||||||| || || ||||||||||| ||||| Sbjct: 248 ggagatgacatctatatgcgttcttggactggcactatcatcggtcctcacaacactgtt 307 Query: 288 catgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaaggca 347 ||||| ||| | ||||| ||| ||||||| ||||||||||| || ||||| ||||| | Sbjct: 308 catgaaggtagaatctatcagttgaagctcttttgtgacaaagattacccggagaaacct 367 Query: 348 ccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccggggcg 407 ||| |||| | ||||||||| | |||||||||||||||| |||||||| || || | | Sbjct: 368 ccaactgtccggttccattcacgtgtcaacatggcttgtgtcaatcacgaaacaggagtg 427 Query: 408 gttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggag 464 || || || ||||| || | | || ||||||||||| ||||||||||||||||| Sbjct: 428 gtggatcctaagaaatttgggctacttgcaaactggcaaagagagtacacaatggag 484
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 163 bits (82), Expect = 8e-37 Identities = 121/134 (90%) Strand = Plus / Minus Query: 141 gttcctcggaacttcaggctgctagaagagcttgagcgcggggagaagggcattggagat 200 ||||| || ||||||||| |||||||||||||||| || || || ||||||||||||||| Sbjct: 7152208 gttccgcgaaacttcaggttgctagaagagcttgaacgtggtgaaaagggcattggagat 7152149 Query: 201 ggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatggactggc 260 ||||| || |||||||||||||||||||| |||||||| ||||||||||| ||||||||| Sbjct: 7152148 ggaaccgtgagctatggaatggatgatgcagatgacatctacatgcggtcttggactggc 7152089 Query: 261 accattattggtcc 274 ||||| |||||||| Sbjct: 7152088 accatcattggtcc 7152075 Score = 139 bits (70), Expect = 1e-29 Identities = 112/126 (88%) Strand = Plus / Minus Query: 284 tgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaa 343 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 7151655 tgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaaggactacccagagaa 7151596 Query: 344 ggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccgg 403 | |||||||||| | || |||||||||||||| ||| | ||||||||||| ||||| || Sbjct: 7151595 gccaccatctgtccggtttcattcaagaatcaatatgtcgtgtgttaatcatgagactgg 7151536 Query: 404 ggcggt 409 ||||| Sbjct: 7151535 agcggt 7151530 Score = 91.7 bits (46), Expect = 2e-15 Identities = 118/142 (83%) Strand = Plus / Minus Query: 407 ggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggagca 466 ||||||| ||| |||||| |||| ||||||||||||||||| |||||||| |||||| Sbjct: 7151438 ggttgactcgaggaagtttggtgttctagcaaactggcagcgcgagtacaccatggagac 7151379 Query: 467 tgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaagctagtgcagcc 526 | || | |||||||| ||||| || |||||| | | ||||| |||||| | ||||| || Sbjct: 7151378 tatccttacccagctcaagaaggagatggcaaccccgcagaatcgcaagttggtgcaacc 7151319 Query: 527 tccagaagggacattcttctag 548 |||||||||||| ||||||||| Sbjct: 7151318 tccagaagggacgttcttctag 7151297 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 95 atcgacgatgacgctgggcagctccggcgccggatcgagcgtcgtcg 141 |||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 7153907 atcggcgatgacgctggggagctccggcgccggatcgagcgtcgtcg 7153861
>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1381_H04 Length = 130961 Score = 163 bits (82), Expect = 8e-37 Identities = 121/134 (90%) Strand = Plus / Minus Query: 141 gttcctcggaacttcaggctgctagaagagcttgagcgcggggagaagggcattggagat 200 ||||| || ||||||||| |||||||||||||||| || || || ||||||||||||||| Sbjct: 4313 gttccgcgaaacttcaggttgctagaagagcttgaacgtggtgaaaagggcattggagat 4254 Query: 201 ggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatggactggc 260 ||||| || |||||||||||||||||||| |||||||| ||||||||||| ||||||||| Sbjct: 4253 ggaaccgtgagctatggaatggatgatgcagatgacatctacatgcggtcttggactggc 4194 Query: 261 accattattggtcc 274 ||||| |||||||| Sbjct: 4193 accatcattggtcc 4180 Score = 139 bits (70), Expect = 1e-29 Identities = 112/126 (88%) Strand = Plus / Minus Query: 284 tgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaa 343 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 3760 tgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaaggactacccagagaa 3701 Query: 344 ggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccgg 403 | |||||||||| | || |||||||||||||| ||| | ||||||||||| ||||| || Sbjct: 3700 gccaccatctgtccggtttcattcaagaatcaatatgtcgtgtgttaatcatgagactgg 3641 Query: 404 ggcggt 409 ||||| Sbjct: 3640 agcggt 3635 Score = 91.7 bits (46), Expect = 2e-15 Identities = 118/142 (83%) Strand = Plus / Minus Query: 407 ggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggagca 466 ||||||| ||| |||||| |||| ||||||||||||||||| |||||||| |||||| Sbjct: 3543 ggttgactcgaggaagtttggtgttctagcaaactggcagcgcgagtacaccatggagac 3484 Query: 467 tgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaagctagtgcagcc 526 | || | |||||||| ||||| || |||||| | | ||||| |||||| | ||||| || Sbjct: 3483 tatccttacccagctcaagaaggagatggcaaccccgcagaatcgcaagttggtgcaacc 3424 Query: 527 tccagaagggacattcttctag 548 |||||||||||| ||||||||| Sbjct: 3423 tccagaagggacgttcttctag 3402 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 95 atcgacgatgacgctgggcagctccggcgccggatcgagcgtcgtcg 141 |||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 6012 atcggcgatgacgctggggagctccggcgccggatcgagcgtcgtcg 5966
>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0592C05 Length = 150478 Score = 163 bits (82), Expect = 8e-37 Identities = 121/134 (90%) Strand = Plus / Minus Query: 141 gttcctcggaacttcaggctgctagaagagcttgagcgcggggagaagggcattggagat 200 ||||| || ||||||||| |||||||||||||||| || || || ||||||||||||||| Sbjct: 104287 gttccgcgaaacttcaggttgctagaagagcttgaacgtggtgaaaagggcattggagat 104228 Query: 201 ggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatggactggc 260 ||||| || |||||||||||||||||||| |||||||| ||||||||||| ||||||||| Sbjct: 104227 ggaaccgtgagctatggaatggatgatgcagatgacatctacatgcggtcttggactggc 104168 Query: 261 accattattggtcc 274 ||||| |||||||| Sbjct: 104167 accatcattggtcc 104154 Score = 139 bits (70), Expect = 1e-29 Identities = 112/126 (88%) Strand = Plus / Minus Query: 284 tgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaa 343 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 103734 tgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaaggactacccagagaa 103675 Query: 344 ggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccgg 403 | |||||||||| | || |||||||||||||| ||| | ||||||||||| ||||| || Sbjct: 103674 gccaccatctgtccggtttcattcaagaatcaatatgtcgtgtgttaatcatgagactgg 103615 Query: 404 ggcggt 409 ||||| Sbjct: 103614 agcggt 103609 Score = 91.7 bits (46), Expect = 2e-15 Identities = 118/142 (83%) Strand = Plus / Minus Query: 407 ggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggagca 466 ||||||| ||| |||||| |||| ||||||||||||||||| |||||||| |||||| Sbjct: 103517 ggttgactcgaggaagtttggtgttctagcaaactggcagcgcgagtacaccatggagac 103458 Query: 467 tgtcttgacccagctgaagaaagacatggcagcgacccagaaccgcaagctagtgcagcc 526 | || | |||||||| ||||| || |||||| | | ||||| |||||| | ||||| || Sbjct: 103457 tatccttacccagctcaagaaggagatggcaaccccgcagaatcgcaagttggtgcaacc 103398 Query: 527 tccagaagggacattcttctag 548 |||||||||||| ||||||||| Sbjct: 103397 tccagaagggacgttcttctag 103376 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 95 atcgacgatgacgctgggcagctccggcgccggatcgagcgtcgtcg 141 |||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 105986 atcggcgatgacgctggggagctccggcgccggatcgagcgtcgtcg 105940
>gb|AY089084.1| Arabidopsis thaliana clone 29951 mRNA, complete sequence Length = 798 Score = 161 bits (81), Expect = 3e-36 Identities = 243/297 (81%) Strand = Plus / Plus Query: 168 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 227 |||||||| || || ||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 218 gagcttgaacgtggagagaaaggtattggagatggaactgtgagctatggaatggatgat 277 Query: 228 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtc 287 | |||||||| || ||||| || ||||||||||| || || ||||||||||| ||||| Sbjct: 278 ggagatgacatttatatgcgctcttggactggcactatcatcggtcctcacaacactgta 337 Query: 288 catgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaaggca 347 ||||||||||| || || ||| ||||||| || |||||||| || ||||||||||| | Sbjct: 338 catgagggtcggatttatcagttgaagctcttctgtgacaaagattaccctgagaaacct 397 Query: 348 ccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccggggcg 407 || ||||| | |||||||| | ||||||||| ||||||| || || || ||||| | | Sbjct: 398 ccgactgttcggttccattcgcgtatcaacatgacttgtgtcaaccatgataccggcgtg 457 Query: 408 gttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggag 464 || || | |||||||| | || || ||||||||||| || |||||||||||||| Sbjct: 458 gtggattcaaagaagtttggggttcttgcaaactggcaaagacagtacacaatggag 514
>ref|NM_180353.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT3G52560 transcript variant AT3G52560.2 mRNA, complete cds Length = 864 Score = 155 bits (78), Expect = 2e-34 Identities = 245/300 (81%), Gaps = 3/300 (1%) Strand = Plus / Plus Query: 168 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 227 |||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 187 gagcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgat 246 Query: 228 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaa---tact 284 | |||||||| || ||||| || |||||||||||||| || ||||||||||| ||| Sbjct: 247 ggagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaacgtaact 306 Query: 285 gtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaag 344 || ||||| ||| | ||||| ||| ||||||| ||||||||||| || ||||| ||||| Sbjct: 307 gttcatgaaggtagaatctatcagttgaagctcttttgtgacaaagattacccggagaaa 366 Query: 345 gcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacgagaccggg 404 | ||| |||| ||||||||||| | |||||||||||||||| || ||||| || || Sbjct: 367 cctccaactgtccgattccattcacgtgtcaacatggcttgtgtcaaccacgaaacagga 426 Query: 405 gcggttgacccgaagaagttcagtgtgctagcaaactggcagcgagagtacacaatggag 464 | ||| || || ||||| || | | || ||||||||||| ||||||||||||||||| Sbjct: 427 gtggtggatcctaagaaatttgggctacttgcaaactggcaaagagagtacacaatggag 486
>ref|NM_179928.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT2G36060 transcript variant AT2G36060.2 mRNA, complete cds Length = 840 Score = 151 bits (76), Expect = 3e-33 Identities = 276/342 (80%), Gaps = 3/342 (0%) Strand = Plus / Plus Query: 126 ggatcgagcgtcgtcgttcctcggaacttcaggctgctagaagagcttgagcgcggggag 185 |||||||| || |||||||| |||| ||| || |||| || |||||||| || || ||| Sbjct: 200 ggatcgagtgttgtcgttccgaggaatttccggttgctggaggagcttgaacgtggagag 259 Query: 186 aagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatacatg 245 || || ||||||||||||||||| ||||||||||||||||||| |||||||| || ||| Sbjct: 260 aaaggtattggagatggaactgtgagctatggaatggatgatggagatgacatttatatg 319 Query: 246 cggtcatggactggcaccattattggtcctcacaa---tactgtccatgagggtcgcatc 302 || || ||||||||||| || || ||||||||||| ||||| ||||||||||| || Sbjct: 320 cgctcttggactggcactatcatcggtcctcacaacgtaactgtacatgagggtcggatt 379 Query: 303 taccagctgaagctgttttgtgacaaggactaccctgagaaggcaccatctgttagattc 362 || ||| ||||||| || |||||||| || ||||||||||| | || ||||| | ||| Sbjct: 380 tatcagttgaagctcttctgtgacaaagattaccctgagaaacctccgactgttcggttc 439 Query: 363 cattcaagaatcaacatggcttgtgttaatcacgagaccggggcggttgacccgaagaag 422 ||||| | ||||||||| ||||||| || || || ||||| | ||| || | |||||| Sbjct: 440 cattcgcgtatcaacatgacttgtgtcaaccatgataccggcgtggtggattcaaagaag 499 Query: 423 ttcagtgtgctagcaaactggcagcgagagtacacaatggag 464 || | || || ||||||||||| || |||||||||||||| Sbjct: 500 tttggggttcttgcaaactggcaaagacagtacacaatggag 541
>dbj|AK120951.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038L10, full insert sequence Length = 790 Score = 151 bits (76), Expect = 3e-33 Identities = 163/192 (84%) Strand = Plus / Plus Query: 134 cgtcgtcgttcctcggaacttcaggctgctagaagagcttgagcgcggggagaagggcat 193 |||||||||||| | ||||| || ||||| |||||||||||||| || ||||||||||| Sbjct: 120 cgtcgtcgttcccagaaactttagactgcttgaagagcttgagcgaggtgagaagggcat 179 Query: 194 tggagatggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatg 253 ||| ||||| || || |||||||||||||||||||||||||||||||| ||||| || || Sbjct: 180 tggtgatgggacagtgagctatggaatggatgatgctgatgacatatatatgcgttcctg 239 Query: 254 gactggcaccattattggtcctcacaatactgtccatgagggtcgcatctaccagctgaa 313 ||| || || || ||||| |||| |||||||| |||||||| || ||||| ||| |||| Sbjct: 240 gacaggaactatcattggccctcctaatactgttcatgagggacgaatctatcagttgaa 299 Query: 314 gctgttttgtga 325 | |||| ||||| Sbjct: 300 gttgttctgtga 311
>ref|XM_469523.1| Oryza sativa (japonica cultivar-group), mRNA Length = 486 Score = 143 bits (72), Expect = 7e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 150 aacttcaggctgctagaagagcttgagcgcggggagaagggcattggagatggaactgtc 209 ||||| || ||||| |||||||||||||| || |||||||||||||| ||||| || || Sbjct: 43 aactttagactgcttgaagagcttgagcgaggtgagaagggcattggtgatgggacagtg 102 Query: 210 agctatggaatggatgatgctgatgacatatacatgcggtcatggactggcaccattatt 269 |||||||||||||||||||||||||||||||| ||||| || ||||| || || || ||| Sbjct: 103 agctatggaatggatgatgctgatgacatatatatgcgttcctggacaggaactatcatt 162 Query: 270 ggtcctcacaatactgtccatgagggtcgcatctaccagctgaagctgttttgtga 325 || |||| |||||||| |||||||| || ||||| ||| ||||| |||| ||||| Sbjct: 163 ggccctcctaatactgttcatgagggacgaatctatcagttgaagttgttctgtga 218
>gb|AY107839.1| Zea mays PCO143146 mRNA sequence Length = 1245 Score = 143 bits (72), Expect = 7e-31 Identities = 150/176 (85%) Strand = Plus / Plus Query: 150 aacttcaggctgctagaagagcttgagcgcggggagaagggcattggagatggaactgtc 209 ||||| |||||||||||||| || || || || |||||||||||||| ||||||||||| Sbjct: 265 aactttaggctgctagaagaactagaacgtggtgagaagggcattggtgatggaactgtg 324 Query: 210 agctatggaatggatgatgctgatgacatatacatgcggtcatggactggcaccattatt 269 |||||||| ||||| |||||||||||||||| |||||||| ||||| || || || ||| Sbjct: 325 agctatgggatggacgatgctgatgacatatttatgcggtcctggacaggaactatcatt 384 Query: 270 ggtcctcacaatactgtccatgagggtcgcatctaccagctgaagctgttttgtga 325 ||||||| ||| ||||| || ||||| || ||||| ||| | |||||||||||||| Sbjct: 385 ggtcctcccaacactgttcacgagggacgaatctatcagttaaagctgttttgtga 440
>gb|DQ235194.1| Solanum tuberosum clone 168B03 ubiquitin-conjugating enzyme family protein-like mRNA, complete cds Length = 682 Score = 135 bits (68), Expect = 2e-28 Identities = 152/180 (84%) Strand = Plus / Plus Query: 171 cttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatgct 230 ||||| || ||||||||||| ||||||||||| || || |||||||| |||||||||| Sbjct: 166 cttgaacgtggggagaagggtattggagatgggacagtgagctatggtatggatgatgga 225 Query: 231 gatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtccat 290 ||||| || || ||||| || |||||||||||||||||||||||||||||| |||| ||| Sbjct: 226 gatgatatttatatgcgttcttggactggcaccattattggtcctcacaattctgtgcat 285 Query: 291 gagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaaggcacca 350 || || ||||| || ||| ||||||| || || |||||||| || || |||||| ||||| Sbjct: 286 gaaggccgcatttatcagttgaagctattctgcgacaaggattatccggagaagccacca 345 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 436 caaactggcagcgagagtacacaatgga 463 |||| ||||||||||||||||| ||||| Sbjct: 431 caaattggcagcgagagtacactatgga 458
>gb|DQ191643.1| Solanum tuberosum ubiquitin-conjugating enzyme family protein-like protein mRNA, complete cds Length = 764 Score = 135 bits (68), Expect = 2e-28 Identities = 152/180 (84%) Strand = Plus / Plus Query: 171 cttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgatgct 230 ||||| || ||||||||||| ||||||||||| || || |||||||| |||||||||| Sbjct: 158 cttgaacgtggggagaagggtattggagatgggacagtgagctatggtatggatgatgga 217 Query: 231 gatgacatatacatgcggtcatggactggcaccattattggtcctcacaatactgtccat 290 ||||| || || ||||| || |||||||||||||||||||||||||||||| |||| ||| Sbjct: 218 gatgatatttatatgcgttcttggactggcaccattattggtcctcacaattctgtgcat 277 Query: 291 gagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaaggcacca 350 || || ||||| || ||| ||||||| || || |||||||| || || |||||| ||||| Sbjct: 278 gaaggccgcatttatcagttgaagctattctgcgacaaggattatccggagaagccacca 337 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 436 caaactggcagcgagagtacacaatgga 463 |||| ||||||||||||||||| ||||| Sbjct: 423 caaattggcagcgagagtacactatgga 450
>gb|AC150979.15| Medicago truncatula clone mth2-115a17, complete sequence Length = 152779 Score = 133 bits (67), Expect = 7e-28 Identities = 97/107 (90%) Strand = Plus / Minus Query: 165 gaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggat 224 |||||||||||||| || |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 105551 gaagagcttgagcgaggtgagaagggaattggagatggaactgttagctatggaatggat 105492 Query: 225 gatgctgatgacatatacatgcggtcatggactggcaccattattgg 271 || |||||||| |||| ||||| |||||||||||| || |||||||| Sbjct: 105491 gacgctgatgatatattcatgcagtcatggactgggactattattgg 105445 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 282 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 341 ||||| ||||| ||||| ||||||||| ||||| ||||||||| |||||| || || || Sbjct: 104087 actgttcatgaaggtcgtatctaccagttgaagttgttttgtggcaaggattatccagac 104028 Query: 342 aaggcaccatctgttagatt 361 || |||||||||||||||| Sbjct: 104027 aatccaccatctgttagatt 104008
>gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete sequence Length = 120870 Score = 133 bits (67), Expect = 7e-28 Identities = 97/107 (90%) Strand = Plus / Minus Query: 165 gaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggat 224 |||||||||||||| || |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 2883 gaagagcttgagcgaggtgagaagggaattggagatggaactgttagctatggaatggat 2824 Query: 225 gatgctgatgacatatacatgcggtcatggactggcaccattattgg 271 || |||||||| |||| ||||| |||||||||||| || |||||||| Sbjct: 2823 gacgctgatgatatattcatgcagtcatggactgggactattattgg 2777 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 282 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 341 ||||| ||||| ||||| ||||||||| ||||| ||||||||| |||||| || || || Sbjct: 1419 actgttcatgaaggtcgtatctaccagttgaagttgttttgtggcaaggattatccagac 1360 Query: 342 aaggcaccatctgttagatt 361 || |||||||||||||||| Sbjct: 1359 aatccaccatctgttagatt 1340
>gb|DQ097727.1| Arachis hypogaea ubiquitin-conjugating enzyme 2 mRNA, complete cds Length = 818 Score = 129 bits (65), Expect = 1e-26 Identities = 164/197 (83%) Strand = Plus / Plus Query: 165 gaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggat 224 |||||||||||| | || |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 159 gaagagcttgagagaggtgagaagggaattggagatggaactgtaagctatggaatggat 218 Query: 225 gatgctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatact 284 ||||||||||| || ||||||| ||||||||||| || ||||| ||||| | |||| Sbjct: 219 gatgctgatgatatctacatgcaatcatggactgggacaattataggtccccctggtact 278 Query: 285 gtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgagaag 344 ||||| || || || |||||||| |||| ||||||||| ||||| || || || || Sbjct: 279 gtccacgaagggcgtatctaccaattgaaattgttttgtggtaaggattatccagacaat 338 Query: 345 gcaccatctgttagatt 361 |||||||||||||||| Sbjct: 339 ccaccatctgttagatt 355
>dbj|AP004536.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT15N19, TM0097b, complete sequence Length = 78574 Score = 127 bits (64), Expect = 4e-26 Identities = 94/104 (90%) Strand = Plus / Minus Query: 165 gaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggat 224 |||||||||||||| || |||||||| ||||||||||||||||| |||||||||||||| Sbjct: 75155 gaagagcttgagcgaggtgagaagggaattggagatggaactgtaagctatggaatggac 75096 Query: 225 gatgctgatgacatatacatgcggtcatggactggcaccattat 268 || |||||||| |||||||||| |||||||||||| || ||||| Sbjct: 75095 gacgctgatgatatatacatgcagtcatggactggaacaattat 75052
>gb|AY587772.1| Tamarix androssowii ubiquitin-conjugating enzyme family protein mRNA, complete cds Length = 607 Score = 125 bits (63), Expect = 2e-25 Identities = 150/179 (83%) Strand = Plus / Plus Query: 150 aacttcaggctgctagaagagcttgagcgcggggagaagggcattggagatggaactgtc 209 ||||||||| |||| || || ||||| || || || || || ||||||||||||| |||| Sbjct: 144 aacttcaggttgctggaggaacttgaacgtggtgaaaaaggaattggagatggaagtgtc 203 Query: 210 agctatggaatggatgatgctgatgacatatacatgcggtcatggactggcaccattatt 269 || ||||| |||||||||| ||||| ||||| ||||| || ||||| ||||| || ||| Sbjct: 204 agttatggtatggatgatggagatgatatatatatgcgttcttggacaggcacaataatt 263 Query: 270 ggtcctcacaatactgtccatgagggtcgcatctaccagctgaagctgttttgtgacaa 328 ||||||||||||||||| |||||||| ||||| || || |||||||| || |||||||| Sbjct: 264 ggtcctcacaatactgtacatgagggccgcatttatcaactgaagctcttctgtgacaa 322
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 125 bits (63), Expect = 2e-25 Identities = 111/127 (87%) Strand = Plus / Minus Query: 148 ggaacttcaggctgctagaagagcttgagcgcggggagaagggcattggagatggaactg 207 |||||||||| |||||||||||||||||| | |||||||||||||| || |||||| | | Sbjct: 25593366 ggaacttcagactgctagaagagcttgagagaggggagaagggcatcggtgatggatcag 25593307 Query: 208 tcagctatggaatggatgatgctgatgacatatacatgcggtcatggactggcaccatta 267 | |||||||||||||||||||| || || || |||||||| || ||||| ||||| |||| Sbjct: 25593306 taagctatggaatggatgatgcagacgatatctacatgcgctcttggacaggcacaatta 25593247 Query: 268 ttggtcc 274 ||||||| Sbjct: 25593246 ttggtcc 25593240 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 450 gagtacacaatggagcatgtcttgacccagctgaagaaagacatggcagcgacccagaac 509 ||||||||||||||| | |||||||||| || |||||||| |||||||| | || ||| Sbjct: 25592850 gagtacacaatggaggctatcttgacccaacttaagaaagagatggcagcatcacacaac 25592791 Query: 510 cgcaagctagtgcagcctccagaagggacattcttctag 548 || || ||||||||||||||||| ||||||||||||||| Sbjct: 25592790 cggaaactagtgcagcctccagaggggacattcttctag 25592752 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 282 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 341 |||||||||||||| || || ||||| |||||||| || || |||||||||||||| || Sbjct: 25593109 actgtccatgagggccggatataccaactgaagcttttctgcgacaaggactacccagac 25593050 Query: 342 aaggcaccatctgttagattccattcaagaatcaacatg 380 | | ||||| |||| | ||| || ||||||||||||||| Sbjct: 25593049 aggccaccaactgtaaaatttcactcaagaatcaacatg 25593011
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 125 bits (63), Expect = 2e-25 Identities = 111/127 (87%) Strand = Plus / Minus Query: 148 ggaacttcaggctgctagaagagcttgagcgcggggagaagggcattggagatggaactg 207 |||||||||| |||||||||||||||||| | |||||||||||||| || |||||| | | Sbjct: 25521542 ggaacttcagactgctagaagagcttgagagaggggagaagggcatcggtgatggatcag 25521483 Query: 208 tcagctatggaatggatgatgctgatgacatatacatgcggtcatggactggcaccatta 267 | |||||||||||||||||||| || || || |||||||| || ||||| ||||| |||| Sbjct: 25521482 taagctatggaatggatgatgcagacgatatctacatgcgctcttggacaggcacaatta 25521423 Query: 268 ttggtcc 274 ||||||| Sbjct: 25521422 ttggtcc 25521416 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 450 gagtacacaatggagcatgtcttgacccagctgaagaaagacatggcagcgacccagaac 509 ||||||||||||||| | |||||||||| || |||||||| |||||||| | || ||| Sbjct: 25521026 gagtacacaatggaggctatcttgacccaacttaagaaagagatggcagcatcacacaac 25520967 Query: 510 cgcaagctagtgcagcctccagaagggacattcttctag 548 || || ||||||||||||||||| ||||||||||||||| Sbjct: 25520966 cggaaactagtgcagcctccagaggggacattcttctag 25520928 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 282 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 341 |||||||||||||| || || ||||| |||||||| || || |||||||||||||| || Sbjct: 25521285 actgtccatgagggccggatataccaactgaagcttttctgcgacaaggactacccagac 25521226 Query: 342 aaggcaccatctgttagattccattcaagaatcaacatg 380 | | ||||| |||| | ||| || ||||||||||||||| Sbjct: 25521225 aggccaccaactgtaaaatttcactcaagaatcaacatg 25521187
>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127003 Score = 125 bits (63), Expect = 2e-25 Identities = 111/127 (87%) Strand = Plus / Plus Query: 148 ggaacttcaggctgctagaagagcttgagcgcggggagaagggcattggagatggaactg 207 |||||||||| |||||||||||||||||| | |||||||||||||| || |||||| | | Sbjct: 80352 ggaacttcagactgctagaagagcttgagagaggggagaagggcatcggtgatggatcag 80411 Query: 208 tcagctatggaatggatgatgctgatgacatatacatgcggtcatggactggcaccatta 267 | |||||||||||||||||||| || || || |||||||| || ||||| ||||| |||| Sbjct: 80412 taagctatggaatggatgatgcagacgatatctacatgcgctcttggacaggcacaatta 80471 Query: 268 ttggtcc 274 ||||||| Sbjct: 80472 ttggtcc 80478 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 450 gagtacacaatggagcatgtcttgacccagctgaagaaagacatggcagcgacccagaac 509 ||||||||||||||| | |||||||||| || |||||||| |||||||| | || ||| Sbjct: 80868 gagtacacaatggaggctatcttgacccaacttaagaaagagatggcagcatcacacaac 80927 Query: 510 cgcaagctagtgcagcctccagaagggacattcttctag 548 || || ||||||||||||||||| ||||||||||||||| Sbjct: 80928 cggaaactagtgcagcctccagaggggacattcttctag 80966 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 282 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 341 |||||||||||||| || || ||||| |||||||| || || |||||||||||||| || Sbjct: 80609 actgtccatgagggccggatataccaactgaagcttttctgcgacaaggactacccagac 80668 Query: 342 aaggcaccatctgttagattccattcaagaatcaacatg 380 | | ||||| |||| | ||| || ||||||||||||||| Sbjct: 80669 aggccaccaactgtaaaatttcactcaagaatcaacatg 80707
>gb|DQ160024.1| Taraxacum officinale TO25-123 (To25-123) mRNA, partial cds Length = 203 Score = 123 bits (62), Expect = 7e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 195 ggagatggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatgg 254 |||||||| || || || |||||||||||||||| || ||||| |||||||| |||||| Sbjct: 23 ggagatggcacagtgagttatggaatggatgatggcgacgacatttacatgcgttcatgg 82 Query: 255 actggcaccattattggtcctcacaatactgtccatgagggtcgcatctaccagctgaag 314 ||||||||||| |||||||||||||| |||| || || |||||||| || || |||||| Sbjct: 83 actggcaccatcattggtcctcacaactctgtacacgaaggtcgcatttatcaactgaag 142 Query: 315 ctgttttgtgacaa 328 |||||||||||||| Sbjct: 143 ctgttttgtgacaa 156
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 117 bits (59), Expect = 4e-23 Identities = 95/107 (88%) Strand = Plus / Plus Query: 150 aacttcaggctgctagaagagcttgagcgcggggagaagggcattggagatggaactgtc 209 ||||| || ||||| |||||||||||||| || |||||||||||||| ||||| || || Sbjct: 28490516 aactttagactgcttgaagagcttgagcgaggtgagaagggcattggtgatgggacagtg 28490575 Query: 210 agctatggaatggatgatgctgatgacatatacatgcggtcatggac 256 |||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 28490576 agctatggaatggatgatgctgatgacatatatatgcgttcctggac 28490622
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 117 bits (59), Expect = 4e-23 Identities = 95/107 (88%) Strand = Plus / Plus Query: 150 aacttcaggctgctagaagagcttgagcgcggggagaagggcattggagatggaactgtc 209 ||||| || ||||| |||||||||||||| || |||||||||||||| ||||| || || Sbjct: 28581840 aactttagactgcttgaagagcttgagcgaggtgagaagggcattggtgatgggacagtg 28581899 Query: 210 agctatggaatggatgatgctgatgacatatacatgcggtcatggac 256 |||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 28581900 agctatggaatggatgatgctgatgacatatatatgcgttcctggac 28581946
>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete sequence Length = 143681 Score = 117 bits (59), Expect = 4e-23 Identities = 95/107 (88%) Strand = Plus / Plus Query: 150 aacttcaggctgctagaagagcttgagcgcggggagaagggcattggagatggaactgtc 209 ||||| || ||||| |||||||||||||| || |||||||||||||| ||||| || || Sbjct: 84646 aactttagactgcttgaagagcttgagcgaggtgagaagggcattggtgatgggacagtg 84705 Query: 210 agctatggaatggatgatgctgatgacatatacatgcggtcatggac 256 |||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 84706 agctatggaatggatgatgctgatgacatatatatgcgttcctggac 84752
>emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BAC clone F3C22 Length = 100028 Score = 113 bits (57), Expect = 6e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 168 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 227 |||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 15862 gagcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgat 15803 Query: 228 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaa 280 | |||||||| || ||||| || |||||||||||||| || ||||||||||| Sbjct: 15802 ggagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaa 15750 Score = 63.9 bits (32), Expect = 5e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 282 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 341 ||||| ||||| ||| | ||||| ||| ||||||| ||||||||||| || ||||| ||| Sbjct: 15508 actgttcatgaaggtagaatctatcagttgaagctcttttgtgacaaagattacccggag 15449 Query: 342 aaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacga 397 || | ||| |||| ||||||||||| | |||||||||||||||| || ||||| Sbjct: 15448 aaacctccaactgtccgattccattcacgtgtcaacatggcttgtgtcaaccacga 15393 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 435 gcaaactggcagcgagagtacacaatggag 464 ||||||||||| ||||||||||||||||| Sbjct: 15271 gcaaactggcaaagagagtacacaatggag 15242
>emb|AL050300.2|ATF22O6 Arabidopsis thaliana DNA chromosome 3, BAC clone F22O6 Length = 93443 Score = 113 bits (57), Expect = 6e-22 Identities = 99/113 (87%) Strand = Plus / Minus Query: 168 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 227 |||||||| || |||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 77579 gagcttgaacgtggggagaaaggtattggggatggaactgtgagctatggaatggatgat 77520 Query: 228 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaa 280 | |||||||| || ||||| || |||||||||||||| || ||||||||||| Sbjct: 77519 ggagatgacatctatatgcgttcttggactggcaccatcatcggtcctcacaa 77467 Score = 63.9 bits (32), Expect = 5e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 282 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 341 ||||| ||||| ||| | ||||| ||| ||||||| ||||||||||| || ||||| ||| Sbjct: 77225 actgttcatgaaggtagaatctatcagttgaagctcttttgtgacaaagattacccggag 77166 Query: 342 aaggcaccatctgttagattccattcaagaatcaacatggcttgtgttaatcacga 397 || | ||| |||| ||||||||||| | |||||||||||||||| || ||||| Sbjct: 77165 aaacctccaactgtccgattccattcacgtgtcaacatggcttgtgtcaaccacga 77110 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 435 gcaaactggcagcgagagtacacaatggag 464 ||||||||||| ||||||||||||||||| Sbjct: 76988 gcaaactggcaaagagagtacacaatggag 76959
>ref|NM_102175.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G23260 mRNA, complete cds Length = 772 Score = 105 bits (53), Expect = 2e-19 Identities = 104/121 (85%) Strand = Plus / Plus Query: 165 gaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggat 224 ||||||||||| | || ||||| || ||||||||||| ||||| ||||||||||||||| Sbjct: 166 gaagagcttgaaagaggtgagaaaggtattggagatggtactgttagctatggaatggat 225 Query: 225 gatgctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatact 284 ||||||||||| || || |||| || ||||||||||||||| ||||||||| |||||| Sbjct: 226 gatgctgatgatatttatatgcaatcttggactggcaccattcttggtcctcctaatact 285 Query: 285 g 285 | Sbjct: 286 g 286
>gb|AY093340.1| Arabidopsis thaliana similar to DNA binding protein (At1g23260) mRNA, complete cds Length = 618 Score = 105 bits (53), Expect = 2e-19 Identities = 104/121 (85%) Strand = Plus / Plus Query: 165 gaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggat 224 ||||||||||| | || ||||| || ||||||||||| ||||| ||||||||||||||| Sbjct: 52 gaagagcttgaaagaggtgagaaaggtattggagatggtactgttagctatggaatggat 111 Query: 225 gatgctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatact 284 ||||||||||| || || |||| || ||||||||||||||| ||||||||| |||||| Sbjct: 112 gatgctgatgatatttatatgcaatcttggactggcaccattcttggtcctcctaatact 171 Query: 285 g 285 | Sbjct: 172 g 172
>gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 map g6825, complete sequence Length = 120938 Score = 105 bits (53), Expect = 2e-19 Identities = 98/113 (86%) Strand = Plus / Plus Query: 168 gagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggatgat 227 |||||||| || || ||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 13437 gagcttgaacgtggagagaaaggtattggagatggaactgtgagctatggaatggatgat 13496 Query: 228 gctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaa 280 | |||||||| || ||||| || ||||||||||| || || ||||||||||| Sbjct: 13497 ggagatgacatttatatgcgctcttggactggcactatcatcggtcctcacaa 13549 Score = 54.0 bits (27), Expect = 5e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 282 actgtccatgagggtcgcatctaccagctgaagctgttttgtgacaaggactaccctgag 341 ||||| ||||||||||| || || ||| ||||||| || |||||||| || ||||||||| Sbjct: 13677 actgtacatgagggtcggatttatcagttgaagctcttctgtgacaaagattaccctgag 13736 Query: 342 aaggcaccatctgttagattccattcaagaatcaacatggcttgtgt 388 || | || ||||| | |||||||| | ||||||||| ||||||| Sbjct: 13737 aaacctccgactgttcggttccattcgcgtatcaacatgacttgtgt 13783
>gb|AY059896.1| Arabidopsis thaliana similar to DNA binding protein (At1g23260; F26F24.10) mRNA, complete cds Length = 771 Score = 105 bits (53), Expect = 2e-19 Identities = 104/121 (85%) Strand = Plus / Plus Query: 165 gaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggat 224 ||||||||||| | || ||||| || ||||||||||| ||||| ||||||||||||||| Sbjct: 166 gaagagcttgaaagaggtgagaaaggtattggagatggtactgttagctatggaatggat 225 Query: 225 gatgctgatgacatatacatgcggtcatggactggcaccattattggtcctcacaatact 284 ||||||||||| || || |||| || ||||||||||||||| ||||||||| |||||| Sbjct: 226 gatgctgatgatatttatatgcaatcttggactggcaccattcttggtcctcctaatact 285 Query: 285 g 285 | Sbjct: 286 g 286
>gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana BAC F26F24 from chromosome I, complete sequence Length = 99053 Score = 103 bits (52), Expect = 6e-19 Identities = 97/112 (86%) Strand = Plus / Minus Query: 165 gaagagcttgagcgcggggagaagggcattggagatggaactgtcagctatggaatggat 224 ||||||||||| | || ||||| || ||||||||||| ||||| ||||||||||||||| Sbjct: 34657 gaagagcttgaaagaggtgagaaaggtattggagatggtactgttagctatggaatggat 34598 Query: 225 gatgctgatgacatatacatgcggtcatggactggcaccattattggtcctc 276 ||||||||||| || || |||| || ||||||||||||||| ||||||||| Sbjct: 34597 gatgctgatgatatttatatgcaatcttggactggcaccattcttggtcctc 34546
>gb|BT013203.1| Lycopersicon esculentum clone 134376R, mRNA sequence Length = 843 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Plus Query: 198 gatggaactgtcagctatggaatggatgatgctgatgacatatacatgcggtcatggact 257 |||||||||||||||||||| ||||||||||| |||||| | ||||||| ||||||||| Sbjct: 226 gatggaactgtcagctatgggatggatgatgcagatgacgtgtacatgcagtcatggaca 285 Query: 258 ggcaccattattggtcctcacaatactgtccatgagggtcgcatctaccagctgaagctg 317 || || || ||||| |||| |||||||| || || || |||||||| |||||||| || Sbjct: 286 ggaactatcattggccctcctaatactgtacacgaagggcgcatctatcagctgaaacta 345 Query: 318 ttttgtg 324 ||||||| Sbjct: 346 ttttgtg 352
>gb|AF051209.1|AF051209 Picea mariana CROC-1-like protein (Sb13) mRNA, partial cds Length = 700 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Plus Query: 180 ggggagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacata 239 |||||||| || || || ||||||| ||||||||| |||||||| ||| ||||| ||| Sbjct: 57 ggggagaaaggaataggcgatggaagtgtcagctacggaatggacgatagcgatgatata 116 Query: 240 tacatgcggtcatggactggcaccattattggtcctcacaat 281 |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 117 tacatgcggtcatggactggtaccatcattggtcctcacaat 158 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 373 tcaacatggcttgtgttaatcacgagac 400 |||||||| ||||||||||||| ||||| Sbjct: 250 tcaacatgacttgtgttaatcaggagac 277
>ref|XM_474414.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 95.6 bits (48), Expect = 1e-16 Identities = 111/132 (84%) Strand = Plus / Plus Query: 417 aagaagttcagtgtgctagcaaactggcagcgagagtacacaatggagcatgtcttgacc 476 ||||||||| | |||| |||||||||||| | |||||||| |||||| || || |||| Sbjct: 316 aagaagttccatatgctggcaaactggcagagggagtacaccatggagaatatcctgacg 375 Query: 477 cagctgaagaaagacatggcagcgacccagaaccgcaagctagtgcagcctccagaaggg 536 ||||||||||| || ||||| ||| | || | ||||||||| || ||||||||||||||| Sbjct: 376 cagctgaagaaggagatggccgcgccgcacagccgcaagctggttcagcctccagaaggg 435 Query: 537 acattcttctag 548 || ||||||||| Sbjct: 436 accttcttctag 447 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 242 catgcggtcatggactggcaccattattggtcctcacaatactgtccatgagggtcgcat 301 |||||| || ||||| ||||| || ||||| || | ||| |||| || ||||| ||||| Sbjct: 141 catgcgctcctggaccggcacaatcattggaccactcaactctgtgcacgaggggcgcat 200 Query: 302 ctaccagctgaagctgttttgtgacaaggactaccc 337 ||||||||||||||| || || |||||||||||||| Sbjct: 201 ctaccagctgaagctcttctgcgacaaggactaccc 236
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 95.6 bits (48), Expect = 1e-16 Identities = 111/132 (84%) Strand = Plus / Plus Query: 417 aagaagttcagtgtgctagcaaactggcagcgagagtacacaatggagcatgtcttgacc 476 ||||||||| | |||| |||||||||||| | |||||||| |||||| || || |||| Sbjct: 35012427 aagaagttccatatgctggcaaactggcagagggagtacaccatggagaatatcctgacg 35012486 Query: 477 cagctgaagaaagacatggcagcgacccagaaccgcaagctagtgcagcctccagaaggg 536 ||||||||||| || ||||| ||| | || | ||||||||| || ||||||||||||||| Sbjct: 35012487 cagctgaagaaggagatggccgcgccgcacagccgcaagctggttcagcctccagaaggg 35012546 Query: 537 acattcttctag 548 || ||||||||| Sbjct: 35012547 accttcttctag 35012558 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 291 gagggtcgcatctaccagctgaagctgttttgtgacaaggactaccc 337 ||||| |||||||||||||||||||| || || |||||||||||||| Sbjct: 35011325 gaggggcgcatctaccagctgaagctcttctgcgacaaggactaccc 35011371 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cggatccgcccgcccgccgc 86 |||||||||||||||||||| Sbjct: 8103033 cggatccgcccgcccgccgc 8103014
>dbj|AK066799.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013077E20, full insert sequence Length = 813 Score = 95.6 bits (48), Expect = 1e-16 Identities = 111/132 (84%) Strand = Plus / Plus Query: 417 aagaagttcagtgtgctagcaaactggcagcgagagtacacaatggagcatgtcttgacc 476 ||||||||| | |||| |||||||||||| | |||||||| |||||| || || |||| Sbjct: 329 aagaagttccatatgctggcaaactggcagagggagtacaccatggagaatatcctgacg 388 Query: 477 cagctgaagaaagacatggcagcgacccagaaccgcaagctagtgcagcctccagaaggg 536 ||||||||||| || ||||| ||| | || | ||||||||| || ||||||||||||||| Sbjct: 389 cagctgaagaaggagatggccgcgccgcacagccgcaagctggttcagcctccagaaggg 448 Query: 537 acattcttctag 548 || ||||||||| Sbjct: 449 accttcttctag 460 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 242 catgcggtcatggactggcaccattattggtcctcacaatactgtccatgagggtcgcat 301 |||||| || ||||| ||||| || ||||| || | ||| |||| || ||||| ||||| Sbjct: 154 catgcgctcctggaccggcacaatcattggaccactcaactctgtgcacgaggggcgcat 213 Query: 302 ctaccagctgaagctgttttgtgacaaggactaccc 337 ||||||||||||||| || || |||||||||||||| Sbjct: 214 ctaccagctgaagctcttctgcgacaaggactaccc 249
>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete sequence Length = 94152 Score = 95.6 bits (48), Expect = 1e-16 Identities = 111/132 (84%) Strand = Plus / Plus Query: 417 aagaagttcagtgtgctagcaaactggcagcgagagtacacaatggagcatgtcttgacc 476 ||||||||| | |||| |||||||||||| | |||||||| |||||| || || |||| Sbjct: 44174 aagaagttccatatgctggcaaactggcagagggagtacaccatggagaatatcctgacg 44233 Query: 477 cagctgaagaaagacatggcagcgacccagaaccgcaagctagtgcagcctccagaaggg 536 ||||||||||| || ||||| ||| | || | ||||||||| || ||||||||||||||| Sbjct: 44234 cagctgaagaaggagatggccgcgccgcacagccgcaagctggttcagcctccagaaggg 44293 Query: 537 acattcttctag 548 || ||||||||| Sbjct: 44294 accttcttctag 44305 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 291 gagggtcgcatctaccagctgaagctgttttgtgacaaggactaccc 337 ||||| |||||||||||||||||||| || || |||||||||||||| Sbjct: 43073 gaggggcgcatctaccagctgaagctcttctgcgacaaggactaccc 43119
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 95.6 bits (48), Expect = 1e-16 Identities = 111/132 (84%) Strand = Plus / Plus Query: 417 aagaagttcagtgtgctagcaaactggcagcgagagtacacaatggagcatgtcttgacc 476 ||||||||| | |||| |||||||||||| | |||||||| |||||| || || |||| Sbjct: 71477 aagaagttccatatgctggcaaactggcagagggagtacaccatggagaatatcctgacg 71536 Query: 477 cagctgaagaaagacatggcagcgacccagaaccgcaagctagtgcagcctccagaaggg 536 ||||||||||| || ||||| ||| | || | ||||||||| || ||||||||||||||| Sbjct: 71537 cagctgaagaaggagatggccgcgccgcacagccgcaagctggttcagcctccagaaggg 71596 Query: 537 acattcttctag 548 || ||||||||| Sbjct: 71597 accttcttctag 71608 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 291 gagggtcgcatctaccagctgaagctgttttgtgacaaggactaccc 337 ||||| |||||||||||||||||||| || || |||||||||||||| Sbjct: 70375 gaggggcgcatctaccagctgaagctcttctgcgacaaggactaccc 70421
>ref|NM_105734.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G70660 mRNA, complete cds Length = 838 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 183 gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 242 ||||| || ||||||||||| || || || ||||||||||||||||||||||| || | Sbjct: 230 gagaaaggaattggagatgggacagtgagttatggaatggatgatgctgatgatattttg 289 Query: 243 atgcggtcatggactggcaccattattggtcctcacaatactg 285 |||| || |||||||| |||||| |||||||||| ||||||| Sbjct: 290 atgcaatcttggactggtaccattcttggtcctcataatactg 332
>gb|BT004943.1| Arabidopsis thaliana clone U20398 putative E2, ubiquitin-conjugating enzyme (At1g70660) mRNA, complete cds Length = 511 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 183 gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 242 ||||| || ||||||||||| || || || ||||||||||||||||||||||| || | Sbjct: 70 gagaaaggaattggagatgggacagtgagttatggaatggatgatgctgatgatattttg 129 Query: 243 atgcggtcatggactggcaccattattggtcctcacaatactg 285 |||| || |||||||| |||||| |||||||||| ||||||| Sbjct: 130 atgcaatcttggactggtaccattcttggtcctcataatactg 172
>gb|BT004011.1| Arabidopsis thaliana clone RAFL14-86-C24 (R20398) putative E2, ubiquitin-conjugating enzyme (At1g70660) mRNA, complete cds Length = 827 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 183 gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 242 ||||| || ||||||||||| || || || ||||||||||||||||||||||| || | Sbjct: 215 gagaaaggaattggagatgggacagtgagttatggaatggatgatgctgatgatattttg 274 Query: 243 atgcggtcatggactggcaccattattggtcctcacaatactg 285 |||| || |||||||| |||||| |||||||||| ||||||| Sbjct: 275 atgcaatcttggactggtaccattcttggtcctcataatactg 317
>gb|AY088344.1| Arabidopsis thaliana clone 5821 mRNA, complete sequence Length = 815 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 183 gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 242 ||||| || ||||||||||| || || || ||||||||||||||||||||||| || | Sbjct: 207 gagaaaggaattggagatgggacagtgagttatggaatggatgatgctgatgatattttg 266 Query: 243 atgcggtcatggactggcaccattattggtcctcacaatactg 285 |||| || |||||||| |||||| |||||||||| ||||||| Sbjct: 267 atgcaatcttggactggtaccattcttggtcctcataatactg 309
>gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A18 genomic sequence, complete sequence Length = 108582 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 183 gagaagggcattggagatggaactgtcagctatggaatggatgatgctgatgacatatac 242 ||||| || ||||||||||| || || || ||||||||||||||||||||||| || | Sbjct: 63589 gagaaaggaattggagatgggacagtgagttatggaatggatgatgctgatgatattttg 63530 Query: 243 atgcggtcatggactggcaccattattggtcctca 277 |||| || |||||||| |||||| |||||||||| Sbjct: 63529 atgcaatcttggactggtaccattcttggtcctca 63495
>gb|DQ455302.1| Medicago truncatula cDNA-AFLP fragment BT12M22_236 sequence Length = 215 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 435 gcaaactggcagcgagagtacacaatggagcatgtcttgacccagctgaagaaagacatg 494 ||||| ||||| ||||||||| |||||| || | ||||||||||||||||||| ||| Sbjct: 170 gcaaattggcaaagagagtacagcatggaggatatactgacccagctgaagaaagaaatg 111 Query: 495 gcagcgacccagaaccgcaagctagtgcagcctccagaagg 535 ||||| | || ||||| ||||| || |||||||||||||| Sbjct: 110 gcagcccctcataaccggaagcttgtccagcctccagaagg 70
>gb|AY062935.1| Chlamydomonas reinhardtii ubiquitin-conjugating enzyme E2 isoform (UBCX) mRNA, complete cds Length = 1007 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 152 cttcaggctgctagaagagcttgagcgcggggagaagggcattggagatggaactgt 208 |||||||||||| || ||||| || ||||| ||||||||| |||| ||||||||||| Sbjct: 94 cttcaggctgctggaggagctggatcgcggcgagaagggctttggtgatggaactgt 150
>emb|AJ617084.1| Nicotiana plumbaginifolia cDNA-AFLP fragment, clone Np285 Length = 346 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 435 gcaaactggcagcgagagtacacaatgga 463 ||||| ||||||||||||||||||||||| Sbjct: 286 gcaaattggcagcgagagtacacaatgga 258
>gb|DQ267678.1| Tricholoma vaccinum isolate GK6514 ubiquitin-conjugating enzyme variant MMS2-like mRNA, partial sequence Length = 229 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 193 ttggagatggaactgtcagctatggaatgga 223 |||| ||||| |||||||||||||||||||| Sbjct: 46 ttggtgatgggactgtcagctatggaatgga 16
>ref|XM_803144.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509721.50) partial mRNA Length = 1137 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 50 ccccactctccctcgatcggatccgc 75 |||||||||||| ||||||||||||| Sbjct: 781 ccccactctcccacgatcggatccgc 806
>ref|XM_806496.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510173.80) partial mRNA Length = 1143 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 50 ccccactctccctcgatcggatccgc 75 |||||||||||| ||||||||||||| Sbjct: 787 ccccactctcccacgatcggatccgc 812
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 tccgcccgcccgccgcgccggt 92 |||||||||||||||||||||| Sbjct: 5238057 tccgcccgcccgccgcgccggt 5238078
>gb|AC146508.3| Pan troglodytes BAC clone RP43-172A15 from 7, complete sequence Length = 208067 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 521 gcagcctccagaagggacatt 541 ||||||||||||||||||||| Sbjct: 72427 gcagcctccagaagggacatt 72407
>gb|AC163393.6| Mus musculus chromosome 15, clone RP24-224P8, complete sequence Length = 167152 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 360 ttccattcaagaatcaacatggctt 384 ||||||||||||||||| ||||||| Sbjct: 107865 ttccattcaagaatcaaaatggctt 107889
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ctttccccacgcgcaggcgat 28 ||||||||||||||||||||| Sbjct: 4301146 ctttccccacgcgcaggcgat 4301126
>gb|AC107775.9| Mus musculus chromosome 15, clone RP23-93N2, complete sequence Length = 169604 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 360 ttccattcaagaatcaacatggctt 384 ||||||||||||||||| ||||||| Sbjct: 157774 ttccattcaagaatcaaaatggctt 157750
>emb|AL670943.14| Mouse DNA sequence from clone RP23-233G6 on chromosome X, complete sequence Length = 197148 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 tgaagctgttttgtgacaagg 330 ||||||||||||||||||||| Sbjct: 74468 tgaagctgttttgtgacaagg 74488
>gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome Length = 1469720 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 tctaccagctgaagctgttt 320 |||||||||||||||||||| Sbjct: 559254 tctaccagctgaagctgttt 559235
>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10, complete sequence Length = 155106 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cggatccgcccgcccgccgc 86 |||||||||||||||||||| Sbjct: 43547 cggatccgcccgcccgccgc 43528
>gb|AC037197.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0065H03, complete sequence Length = 141017 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 tgatgctgatgacatataca 243 |||||||||||||||||||| Sbjct: 84734 tgatgctgatgacatataca 84715
>gb|U29154.1| Caenorhabditis elegans cosmid T07F12, complete sequence Length = 26663 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 ccatccccactctccctcgatcgg 69 |||||||||||||||||| ||||| Sbjct: 10442 ccatccccactctccctcaatcgg 10419
>ref|XM_422845.1| PREDICTED: Gallus gallus similar to KIAA0669 gene product (LOC425043), mRNA Length = 2642 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ggaactgtcagctatggaat 220 |||||||||||||||||||| Sbjct: 741 ggaactgtcagctatggaat 722
>gb|AY531091.1| Uncultured bacterium clone VLCC4 putative dissimilatory membrane-bound nitrate reductase (narG) gene, partial cds Length = 110 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ctcgatcggatccgcccgcc 80 |||||||||||||||||||| Sbjct: 58 ctcgatcggatccgcccgcc 77
>gb|AC147135.2| Mus musculus BAC clone RP24-475E12 from chromosome Y, complete sequence Length = 222469 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 caccatccccactctccctcgatc 67 |||||||||| ||||||||||||| Sbjct: 53454 caccatcccccctctccctcgatc 53431
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 gatccgcccgcccgccgcgccggt 92 |||| ||||||||||||||||||| Sbjct: 1683399 gatctgcccgcccgccgcgccggt 1683376
>ref|XM_656156.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3644.2), mRNA Length = 426 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 148 ggaacttcaggctgctagaagagcttga 175 ||||||||||||| ||||| |||||||| Sbjct: 26 ggaacttcaggcttctagaggagcttga 53
>gb|AC140386.4| Mus musculus BAC clone RP24-88H19 from chromosome Y, complete sequence Length = 222469 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 caccatccccactctccctcgatc 67 |||||||||| ||||||||||||| Sbjct: 53454 caccatcccccctctccctcgatc 53431
>ref|XM_541869.2| PREDICTED: Canis familiaris similar to RNA binding motif protein 15B (LOC484753), mRNA Length = 3865 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 ccgcccgcccgccgcgccgg 91 |||||||||||||||||||| Sbjct: 802 ccgcccgcccgccgcgccgg 821
>emb|BX950853.16| Zebrafish DNA sequence from clone DKEY-25L21 in linkage group 17, complete sequence Length = 214513 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 aaactggcagcgagagtaca 456 |||||||||||||||||||| Sbjct: 88580 aaactggcagcgagagtaca 88561
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 tgatgctgatgacatataca 243 |||||||||||||||||||| Sbjct: 480560 tgatgctgatgacatataca 480541
>gb|AC104322.4| Oryza sativa chromosome 10 BAC OSJNBb0005F01 genomic sequence, complete sequence Length = 151428 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 tgatgctgatgacatataca 243 |||||||||||||||||||| Sbjct: 101326 tgatgctgatgacatataca 101307
>gb|AC153763.3| Loxodonta africana clone VMRC15-160B20, complete sequence Length = 130183 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccgcccgcccgccgcgccgg 91 |||||||||||||||||||| Sbjct: 83409 ccgcccgcccgccgcgccgg 83390
>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence Length = 116601 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ctgaagctgttttgtgacaa 328 |||||||||||||||||||| Sbjct: 21435 ctgaagctgttttgtgacaa 21454
>gb|AE011862.1| Xanthomonas axonopodis pv. citri str. 306, section 240 of 469 of the complete genome Length = 12271 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 tgggcagctccggcgccgga 128 |||||||||||||||||||| Sbjct: 1959 tgggcagctccggcgccgga 1978
>dbj|AB224400.1| Aspergillus oryzae cDNA, contig sequence: AoEST1245 Length = 1232 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 actgtccatgagggtcgcat 301 |||||||||||||||||||| Sbjct: 1057 actgtccatgagggtcgcat 1076
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 actgtccatgagggtcgcat 301 |||||||||||||||||||| Sbjct: 2405018 actgtccatgagggtcgcat 2404999
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 cggcgccggatcgagcgtcg 138 |||||||||||||||||||| Sbjct: 4911249 cggcgccggatcgagcgtcg 4911268
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 tgatgctgatgacatataca 243 |||||||||||||||||||| Sbjct: 6165921 tgatgctgatgacatataca 6165902 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 tgatgctgatgacatataca 243 |||||||||||||||||||| Sbjct: 480560 tgatgctgatgacatataca 480541
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cggatccgcccgcccgccgc 86 |||||||||||||||||||| Sbjct: 5129044 cggatccgcccgcccgccgc 5129025
>emb|AL606597.4|OSJN00042 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0045P24, complete sequence Length = 124420 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cggatccgcccgcccgccgc 86 |||||||||||||||||||| Sbjct: 36565 cggatccgcccgcccgccgc 36546
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cgcccgcccgccgcgccggt 92 |||||||||||||||||||| Sbjct: 3419887 cgcccgcccgccgcgccggt 3419868
>emb|AL929523.5| Zebrafish DNA sequence from clone CH211-250I3, complete sequence Length = 133678 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatccgcccgcccgccgcgc 88 |||||||||||||||||||| Sbjct: 106731 gatccgcccgcccgccgcgc 106750
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 tgatgctgatgacatataca 243 |||||||||||||||||||| Sbjct: 6167507 tgatgctgatgacatataca 6167488 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 tgatgctgatgacatataca 243 |||||||||||||||||||| Sbjct: 480557 tgatgctgatgacatataca 480538
>emb|AL772211.7| Mouse DNA sequence from clone RP23-473B24 on chromosome 4, complete sequence Length = 189040 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gggcattggagatggaactg 207 |||||||||||||||||||| Sbjct: 184855 gggcattggagatggaactg 184874
>emb|AL669980.9| Mouse DNA sequence from clone RP23-218C2 on chromosome 4, complete sequence Length = 157624 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 cctcggaacttcaggctgct 163 |||||||||||||||||||| Sbjct: 109667 cctcggaacttcaggctgct 109648 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,474,045 Number of Sequences: 3902068 Number of extensions: 4474045 Number of successful extensions: 84559 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83550 Number of HSP's gapped (non-prelim): 997 length of query: 560 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 537 effective length of database: 17,143,297,704 effective search space: 9205950867048 effective search space used: 9205950867048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
