ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd24m13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105474.1| Zea mays PCO117051 mRNA sequence 246 6e-62
2gb|BT018530.1| Zea mays clone EL01N0434A06.d mRNA sequence 240 4e-60
3dbj|AK065373.1| Oryza sativa (japonica cultivar-group) cDNA clon... 240 4e-60
4gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome... 105 1e-19
5gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome... 105 1e-19
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
7emb|AJ293478.1|SHY293478 Saccharum hybrid cultivar R570 microsat... 54 5e-04
8gb|AC006357.5| Homo sapiens PAC clone RP5-1121A15 from 7, comple... 42 1.7
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
10dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
11dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
12dbj|AK060539.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
13ref|XM_754841.1| Ustilago maydis 521 hypothetical protein (UM037... 40 6.8
14ref|XM_756107.1| Ustilago maydis 521 hypothetical protein (UM050... 40 6.8
15gb|AC107801.14| Mus musculus, clone RP23-29M6, complete sequence 40 6.8
16emb|AL592203.4| Human DNA sequence from clone RP11-268N1 on chro... 40 6.8
17emb|AL357833.16| Human DNA sequence from clone RP11-482E14 on ch... 40 6.8
18gb|AC129227.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
19emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 40 6.8
20emb|AJ006307.2|RSP6307 Ralstonia sp. JS705 clcR, clcA, mcbF, mcb... 40 6.8
21gb|AC023683.4| Drosophila melanogaster X BAC RP98-29G2 (Roswell ... 40 6.8
22gb|AC025571.20| Homo sapiens 3 BAC RP11-515C21 (Roswell Park Can... 40 6.8
23gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 6.8
24ref|NM_167229.1| Drosophila melanogaster flap wing CG2096-RA, tr... 40 6.8
25gb|AY069047.1| Drosophila melanogaster GH05039 full length cDNA 40 6.8
26dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
27gb|AE003450.4| Drosophila melanogaster chromosome X, section 34 ... 40 6.8
28gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
29dbj|AB215544.1| Equus caballus DNA, microsatellite TKY1601 40 6.8
30emb|AL845417.3| Mouse DNA sequence from clone RP23-20I9 on chrom... 40 6.8 
>gb|AY105474.1| Zea mays PCO117051 mRNA sequence
          Length = 1555

 Score =  246 bits (124), Expect = 6e-62
 Identities = 274/324 (84%)
 Strand = Plus / Plus

                                                                       
Query: 177 ccggcgcgactccaccagtgcacgacctcaacgtgccctacgaggccacgtccgaggagt 236
           ||||| |||| || ||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 295 ccggcacgacaccgccagtgcacgacctcaacgtgccgtacgaggccacatccgaggagt 354

                                                                       
Query: 237 acgccaccccaaccgccgacatgctgttcccaccgacgccgctgcagaccccgatccaga 296
           |||||||||| ||||| |||||||||||||| ||||| ||  |||||||||| |||||||
Sbjct: 355 acgccaccccgaccgctgacatgctgttcccgccgacaccattgcagaccccaatccaga 414

                                                                       
Query: 297 caccacttccagggattgatacagggatgtataacatacccacagggccgtcggactatg 356
           | ||  | |||||||  || ||||||||||| |||||||| || || || || || ||||
Sbjct: 415 ctcctttgccagggacagacacagggatgtacaacatacctactggcccttccgattatg 474

                                                                       
Query: 357 ccccatcgcccatcagtgacatgagaaacgggatggggatgaatgggtctgatccaaaaa 416
           ||||||| || ||||| || || || |||||||||  ||| |||||| | || |||||| 
Sbjct: 475 ccccatcaccgatcagcgatatcaggaacgggatgacgataaatggggcagacccaaaag 534

                                                                       
Query: 417 ctggccgcccaagcccttacatgcaacctccatcaccctggatgaatcagagaccactgg 476
           ||||||| ||||| |||||||||| ||| || || || |||||||||||||| || ||||
Sbjct: 535 ctggccgtccaagtccttacatgccaccaccttccccttggatgaatcagaggccgctgg 594

                                   
Query: 477 gggttgatgtgaatgttgcttatg 500
           | |||||||||||||| |||||||
Sbjct: 595 gtgttgatgtgaatgtcgcttatg 618



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                       
Query: 33  ttcattacctacggcgttggcgatgccgtcctcaacgaactccaggctctctgggaaatg 92
           ||||| |||||||| || ||||| |||||||| ||||| ||||||||||||||||| |||
Sbjct: 159 ttcatcacctacggagtcggcgacgccgtcctaaacgagctccaggctctctgggagatg 218

                                     
Query: 93  aagatgctgcactgtggcgcaatctc 118
           || ||||||||||||||||| |||||
Sbjct: 219 aaaatgctgcactgtggcgcgatctc 244
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>gb|BT018530.1| Zea mays clone EL01N0434A06.d mRNA sequence
          Length = 1595

 Score =  240 bits (121), Expect = 4e-60
 Identities = 273/324 (84%)
 Strand = Plus / Plus

                                                                       
Query: 177 ccggcgcgactccaccagtgcacgacctcaacgtgccctacgaggccacgtccgaggagt 236
           ||||| |||| || ||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 315 ccggcacgacaccgccagtgcacgacctcaacgtgccgtacgaggccacatccgaggagt 374

                                                                       
Query: 237 acgccaccccaaccgccgacatgctgttcccaccgacgccgctgcagaccccgatccaga 296
           |||||||||| ||||| |||||||||||||| ||||| ||  |||||||||| |||||||
Sbjct: 375 acgccaccccgaccgctgacatgctgttcccgccgacaccattgcagaccccaatccaga 434

                                                                       
Query: 297 caccacttccagggattgatacagggatgtataacatacccacagggccgtcggactatg 356
           | ||  | |||||||  || ||||||||||| |||||||| || || || || || ||||
Sbjct: 435 ctcctttgccagggacagacacagggatgtacaacatacctactggcccttccgattatg 494

                                                                       
Query: 357 ccccatcgcccatcagtgacatgagaaacgggatggggatgaatgggtctgatccaaaaa 416
           ||||||| || ||||| || || || |||||||||  ||| |||||| | || |||||| 
Sbjct: 495 ccccatcaccgatcagcgatatcaggaacgggatgacgataaatggggcagacccaaaag 554

                                                                       
Query: 417 ctggccgcccaagcccttacatgcaacctccatcaccctggatgaatcagagaccactgg 476
           ||||||| ||||| |||||||||| ||| || || || ||||||||||| || || ||||
Sbjct: 555 ctggccgtccaagtccttacatgccaccaccttccccttggatgaatcanaggccgctgg 614

                                   
Query: 477 gggttgatgtgaatgttgcttatg 500
           | |||||||||||||| |||||||
Sbjct: 615 gtgttgatgtgaatgtcgcttatg 638



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                       
Query: 33  ttcattacctacggcgttggcgatgccgtcctcaacgaactccaggctctctgggaaatg 92
           ||||| |||||||| || ||||| |||||||| ||||| ||||||||||||||||| |||
Sbjct: 179 ttcatcacctacggagtcggcgacgccgtcctaaacgagctccaggctctctgggagatg 238

                                     
Query: 93  aagatgctgcactgtggcgcaatctc 118
           || ||||||||||||||||| |||||
Sbjct: 239 aaaatgctgcactgtggcgcgatctc 264
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>dbj|AK065373.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022M09, full
           insert sequence
          Length = 1631

 Score =  240 bits (121), Expect = 4e-60
 Identities = 262/309 (84%)
 Strand = Plus / Plus

                                                                       
Query: 197 cacgacctcaacgtgccctacgaggccacgtccgaggagtacgccaccccaaccgccgac 256
           |||||||| |||||||||||||||||||| || ||||||||||||||||| || || |||
Sbjct: 374 cacgacctaaacgtgccctacgaggccacctcggaggagtacgccacccccacagcggac 433

                                                                       
Query: 257 atgctgttcccaccgacgccgctgcagaccccgatccagacaccacttccagggattgat 316
           ||||||||||| ||||||||||| || |||||||||||||| || |||||||| |  |||
Sbjct: 434 atgctgttccccccgacgccgctacaaaccccgatccagacccctcttccaggaacagat 493

                                                                       
Query: 317 acagggatgtataacatacccacagggccgtcggactatgccccatcgcccatcagtgac 376
            |||||||||| ||||| ||||| ||||| || ||||||||||| || || |||||||||
Sbjct: 494 gcagggatgtacaacattcccactgggccttcagactatgccccttccccgatcagtgac 553

                                                                       
Query: 377 atgagaaacgggatggggatgaatgggtctgatccaaaaactggccgcccaagcccttac 436
            |||| || || ||||  ||||||||  |||||||||| ||||| ||||| || || |||
Sbjct: 554 gtgaggaatggcatggccatgaatggagctgatccaaagactggtcgcccgagtccctac 613

                                                                       
Query: 437 atgcaacctccatcaccctggatgaatcagagaccactgggggttgatgtgaatgttgct 496
           ||||  || || || |||||||||| |||||| || ||||| |||||||||||||| |||
Sbjct: 614 atgcctccaccctctccctggatgactcagaggccgctgggcgttgatgtgaatgtcgct 673

                    
Query: 497 tatgaggag 505
           |||| ||||
Sbjct: 674 tatgtggag 682



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 84/94 (89%), Gaps = 1/94 (1%)
 Strand = Plus / Plus

                                                                       
Query: 42  tacggcgttggcgatgccgtcctcaacgaactccaggctctctgggaaatgaagatgctg 101
           |||||||| ||||| || ||||||||||| |||||||| |||||||| ||||||||||||
Sbjct: 221 tacggcgtcggcgacgctgtcctcaacgagctccaggcgctctgggagatgaagatgctg 280

                                             
Query: 102 cactgtggcgcaatctcagggnaacatcgaccgc 135
           ||||| ||||||||||| ||| | ||||||||||
Sbjct: 281 cactgcggcgcaatctccggg-accatcgaccgc 313
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>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OSJNBa0034M22, complete sequence
          Length = 149435

 Score =  105 bits (53), Expect = 1e-19
 Identities = 140/169 (82%)
 Strand = Plus / Plus

                                                                         
Query: 271   gacgccgctgcagaccccgatccagacaccacttccagggattgatacagggatgtataa 330
             ||||||||| || |||||||||||||| || |||||||| |  ||| |||||||||| ||
Sbjct: 30678 gacgccgctacaaaccccgatccagacccctcttccaggaacagatgcagggatgtacaa 30737

                                                                         
Query: 331   catacccacagggccgtcggactatgccccatcgcccatcagtgacatgagaaacgggat 390
             ||| ||||| ||||| || ||||||||||| || || ||||||||| |||| || || ||
Sbjct: 30738 cattcccactgggccttcagactatgccccttccccgatcagtgacgtgaggaatggcat 30797

                                                              
Query: 391   ggggatgaatgggtctgatccaaaaactggccgcccaagcccttacatg 439
             ||  ||||||||  |||||||||| ||||| ||||| || || ||||||
Sbjct: 30798 ggccatgaatggagctgatccaaagactggtcgcccgagtccctacatg 30846



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                         
Query: 197   cacgacctcaacgtgccctacgaggccacgtccgaggagtacgccaccccaaccgccgac 256
             |||||||| |||||||||||||||||||| || ||||||||||||||||| || || |||
Sbjct: 30476 cacgacctaaacgtgccctacgaggccacctcggaggagtacgccacccccacagcggac 30535

                        
Query: 257   atgctgttccc 267
             |||||||||||
Sbjct: 30536 atgctgttccc 30546



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 50/55 (90%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                    
Query: 81    ctctgggaaatgaagatgctgcactgtggcgcaatctcagggnaacatcgaccgc 135
             |||||||| ||||||||||||||||| ||||||||||| ||| | ||||||||||
Sbjct: 30362 ctctgggagatgaagatgctgcactgcggcgcaatctccggg-accatcgaccgc 30415



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 452   ccctggatgaatcagagaccactgggggttgatgtgaatgt 492
             |||||||||| |||||| || ||||| ||||||||||||||
Sbjct: 30939 ccctggatgactcagaggccgctgggcgttgatgtgaatgt 30979



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 42    tacggcgttggcgatgccgtcctcaacgaactccaggc 79
             |||||||| ||||| || ||||||||||| ||||||||
Sbjct: 30213 tacggcgtcggcgacgctgtcctcaacgagctccaggc 30250
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>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07,
              complete sequence
          Length = 136858

 Score =  105 bits (53), Expect = 1e-19
 Identities = 140/169 (82%)
 Strand = Plus / Plus

                                                                          
Query: 271    gacgccgctgcagaccccgatccagacaccacttccagggattgatacagggatgtataa 330
              ||||||||| || |||||||||||||| || |||||||| |  ||| |||||||||| ||
Sbjct: 103506 gacgccgctacaaaccccgatccagacccctcttccaggaacagatgcagggatgtacaa 103565

                                                                          
Query: 331    catacccacagggccgtcggactatgccccatcgcccatcagtgacatgagaaacgggat 390
              ||| ||||| ||||| || ||||||||||| || || ||||||||| |||| || || ||
Sbjct: 103566 cattcccactgggccttcagactatgccccttccccgatcagtgacgtgaggaatggcat 103625

                                                               
Query: 391    ggggatgaatgggtctgatccaaaaactggccgcccaagcccttacatg 439
              ||  ||||||||  |||||||||| ||||| ||||| || || ||||||
Sbjct: 103626 ggccatgaatggagctgatccaaagactggtcgcccgagtccctacatg 103674



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                          
Query: 197    cacgacctcaacgtgccctacgaggccacgtccgaggagtacgccaccccaaccgccgac 256
              |||||||| |||||||||||||||||||| || ||||||||||||||||| || || |||
Sbjct: 103304 cacgacctaaacgtgccctacgaggccacctcggaggagtacgccacccccacagcggac 103363

                         
Query: 257    atgctgttccc 267
              |||||||||||
Sbjct: 103364 atgctgttccc 103374



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 50/55 (90%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                     
Query: 81     ctctgggaaatgaagatgctgcactgtggcgcaatctcagggnaacatcgaccgc 135
              |||||||| ||||||||||||||||| ||||||||||| ||| | ||||||||||
Sbjct: 103190 ctctgggagatgaagatgctgcactgcggcgcaatctccggg-accatcgaccgc 103243



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                       
Query: 452    ccctggatgaatcagagaccactgggggttgatgtgaatgt 492
              |||||||||| |||||| || ||||| ||||||||||||||
Sbjct: 103767 ccctggatgactcagaggccgctgggcgttgatgtgaatgt 103807



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                    
Query: 42     tacggcgttggcgatgccgtcctcaacgaactccaggc 79
              |||||||| ||||| || ||||||||||| ||||||||
Sbjct: 103041 tacggcgtcggcgacgctgtcctcaacgagctccaggc 103078
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  105 bits (53), Expect = 1e-19
 Identities = 140/169 (82%)
 Strand = Plus / Plus

                                                                            
Query: 271      gacgccgctgcagaccccgatccagacaccacttccagggattgatacagggatgtataa 330
                ||||||||| || |||||||||||||| || |||||||| |  ||| |||||||||| ||
Sbjct: 12733219 gacgccgctacaaaccccgatccagacccctcttccaggaacagatgcagggatgtacaa 12733278

                                                                            
Query: 331      catacccacagggccgtcggactatgccccatcgcccatcagtgacatgagaaacgggat 390
                ||| ||||| ||||| || ||||||||||| || || ||||||||| |||| || || ||
Sbjct: 12733279 cattcccactgggccttcagactatgccccttccccgatcagtgacgtgaggaatggcat 12733338

                                                                 
Query: 391      ggggatgaatgggtctgatccaaaaactggccgcccaagcccttacatg 439
                ||  ||||||||  |||||||||| ||||| ||||| || || ||||||
Sbjct: 12733339 ggccatgaatggagctgatccaaagactggtcgcccgagtccctacatg 12733387



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                            
Query: 197      cacgacctcaacgtgccctacgaggccacgtccgaggagtacgccaccccaaccgccgac 256
                |||||||| |||||||||||||||||||| || ||||||||||||||||| || || |||
Sbjct: 12733017 cacgacctaaacgtgccctacgaggccacctcggaggagtacgccacccccacagcggac 12733076

                           
Query: 257      atgctgttccc 267
                |||||||||||
Sbjct: 12733077 atgctgttccc 12733087



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 50/55 (90%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                       
Query: 81       ctctgggaaatgaagatgctgcactgtggcgcaatctcagggnaacatcgaccgc 135
                |||||||| ||||||||||||||||| ||||||||||| ||| | ||||||||||
Sbjct: 12732903 ctctgggagatgaagatgctgcactgcggcgcaatctccggg-accatcgaccgc 12732956



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 452      ccctggatgaatcagagaccactgggggttgatgtgaatgt 492
                |||||||||| |||||| || ||||| ||||||||||||||
Sbjct: 12733480 ccctggatgactcagaggccgctgggcgttgatgtgaatgt 12733520



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 42       tacggcgttggcgatgccgtcctcaacgaactccaggc 79
                |||||||| ||||| || ||||||||||| ||||||||
Sbjct: 12732754 tacggcgtcggcgacgctgtcctcaacgagctccaggc 12732791
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>emb|AJ293478.1|SHY293478 Saccharum hybrid cultivar R570 microsatellite DNA, clone mSSCIR5
          Length = 456

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/54 (88%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                 
Query: 81  ctctgggaaatgaagatgctgcactgtggcgcaatctcagggnaacatcgaccg 134
           |||||||| ||||| ||||||||||||||||| ||||| ||| ||||| |||||
Sbjct: 127 ctctgggagatgaaaatgctgcactgtggcgcgatctc-ggggaacatagaccg 75



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 177 ccggcgcgactccaccagtgcacgacctcaacgtgcc 213
           ||||| |||| || || ||||||||||||||||||||
Sbjct: 39  ccggcacgacaccgcccgtgcacgacctcaacgtgcc 3
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>gb|AC006357.5| Homo sapiens PAC clone RP5-1121A15 from 7, complete sequence
          Length = 130492

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 89    aatgaagatgctgcactgtgg 109
             |||||||||||||||||||||
Sbjct: 75992 aatgaagatgctgcactgtgg 76012
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 447      catcaccctggatgaatcaga 467
                |||||||||||||||||||||
Sbjct: 35058077 catcaccctggatgaatcaga 35058057
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>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0485B12
          Length = 156047

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 447   catcaccctggatgaatcaga 467
             |||||||||||||||||||||
Sbjct: 65227 catcaccctggatgaatcaga 65207
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>dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0703B11
          Length = 144074

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 447    catcaccctggatgaatcaga 467
              |||||||||||||||||||||
Sbjct: 102305 catcaccctggatgaatcaga 102285
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>dbj|AK060539.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-E03, full
            insert sequence
          Length = 1530

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 447  catcaccctggatgaatcaga 467
            |||||||||||||||||||||
Sbjct: 1157 catcaccctggatgaatcaga 1177
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>ref|XM_754841.1| Ustilago maydis 521 hypothetical protein (UM03787.1) partial mRNA
          Length = 1143

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 ccaccgacgccgctgcagac 285
           ||||||||||||||||||||
Sbjct: 98  ccaccgacgccgctgcagac 117
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>ref|XM_756107.1| Ustilago maydis 521 hypothetical protein (UM05053.1) partial mRNA
          Length = 654

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 5   agacgttgtcgccaagttcg 24
           ||||||||||||||||||||
Sbjct: 537 agacgttgtcgccaagttcg 556
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>gb|AC107801.14| Mus musculus, clone RP23-29M6, complete sequence
          Length = 283075

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 81     ctctgggaaatgaagatgctgcac 104
              ||||||||||||||| ||||||||
Sbjct: 255590 ctctgggaaatgaagctgctgcac 255567
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>emb|AL592203.4| Human DNA sequence from clone RP11-268N1 on chromosome 1, complete
             sequence
          Length = 181535

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 438   tgcaacctccatcaccctgg 457
             ||||||||||||||||||||
Sbjct: 99462 tgcaacctccatcaccctgg 99481
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>emb|AL357833.16| Human DNA sequence from clone RP11-482E14 on chromosome 10 Contains two
             novel genes and a CpG island, complete sequence
          Length = 178563

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 438   tgcaacctccatcaccctgg 457
             ||||||||||||||||||||
Sbjct: 33095 tgcaacctccatcaccctgg 33114
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>gb|AC129227.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0099J16, complete sequence
          Length = 133198

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   tccagggattgatacaggga 323
             ||||||||||||||||||||
Sbjct: 45167 tccagggattgatacaggga 45148
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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 50      tggcgatgccgtcctcaacgaact 73
               |||||||||||||||||| |||||
Sbjct: 4075572 tggcgatgccgtcctcaaagaact 4075595
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>emb|AJ006307.2|RSP6307 Ralstonia sp. JS705 clcR, clcA, mcbF, mcbAa, mcbAb, mcbAc, mcbAd and
            mcbB genes
          Length = 12483

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  tcaacgtgccctacgaggcc 223
            ||||||||||||||||||||
Sbjct: 4345 tcaacgtgccctacgaggcc 4364
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>gb|AC023683.4| Drosophila melanogaster X BAC RP98-29G2 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 160194

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    ggtgctcctggtgccggcgc 183
              ||||||||||||||||||||
Sbjct: 103022 ggtgctcctggtgccggcgc 103003
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>gb|AC025571.20| Homo sapiens 3 BAC RP11-515C21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 159902

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 438    tgcaacctccatcaccctgg 457
              ||||||||||||||||||||
Sbjct: 113078 tgcaacctccatcaccctgg 113059
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 44      cggcgttggcgatgccgtcc 63
               ||||||||||||||||||||
Sbjct: 1853448 cggcgttggcgatgccgtcc 1853467
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>ref|NM_167229.1| Drosophila melanogaster flap wing CG2096-RA, transcript variant A
           (flw), mRNA
          Length = 2571

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 ggtgctcctggtgccggcgc 183
           ||||||||||||||||||||
Sbjct: 811 ggtgctcctggtgccggcgc 830
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>gb|AY069047.1| Drosophila melanogaster GH05039 full length cDNA
          Length = 2727

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 ggtgctcctggtgccggcgc 183
           ||||||||||||||||||||
Sbjct: 967 ggtgctcctggtgccggcgc 986
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 304      tccagggattgatacaggga 323
                ||||||||||||||||||||
Sbjct: 25959799 tccagggattgatacaggga 25959818
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>gb|AE003450.4| Drosophila melanogaster chromosome X, section 34 of 74 of the complete
              sequence
          Length = 232514

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    ggtgctcctggtgccggcgc 183
              ||||||||||||||||||||
Sbjct: 134278 ggtgctcctggtgccggcgc 134297
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 304      tccagggattgatacaggga 323
                ||||||||||||||||||||
Sbjct: 26278497 tccagggattgatacaggga 26278516
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>dbj|AB215544.1| Equus caballus DNA, microsatellite TKY1601
          Length = 199

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gaaatgaagatgctgcactg 106
           ||||||||||||||||||||
Sbjct: 179 gaaatgaagatgctgcactg 198
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>emb|AL845417.3| Mouse DNA sequence from clone RP23-20I9 on chromosome 2, complete
             sequence
          Length = 144844

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 81    ctctgggaaatgaagatgctgcac 104
             ||||||||||||||| ||||||||
Sbjct: 16672 ctctgggaaatgaagctgctgcac 16695


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,100,228
Number of Sequences: 3902068
Number of extensions: 3100228
Number of successful extensions: 67582
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67425
Number of HSP's gapped (non-prelim): 157
length of query: 505
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 483
effective length of database: 17,147,199,772
effective search space: 8282097489876
effective search space used: 8282097489876
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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