ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd25b11 |
|---|---|
| Clone Library Name | barley_pub |
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 254 bits (649), Expect = 2e-67 Identities = 133/213 (62%), Positives = 159/213 (74%), Gaps = 3/213 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKA+AGEAG+PFFS+S SEFVEMFVG GA+RVRDLFK+AKE AP + Sbjct: 208 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCL 267 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DAVG RG NDER+QTLNQLLTEMDGF+ + +I++AATNRP LDSAL Sbjct: 268 IFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSAL 327 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R+V V PD GR++IL VH R L E+ D +A TPG GADLAN++ Sbjct: 328 MRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLA--PEVSIDSIARRTPGFSGADLANLL 385 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKYGVNG 631 NEAA+L ARR + +I DA++R G+ G Sbjct: 386 NEAAILTARRRKSAITLLEIDDAVDRVVAGMEG 418
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 253 bits (645), Expect = 4e-67 Identities = 131/206 (63%), Positives = 160/206 (77%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKAVAGEAG+PFFS+S SEFVEMFVG GA+RVRDLF++AK AP I Sbjct: 197 VLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAPCI 256 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +FIDE+DAVG RG NDER+QTLNQLLTEMDGF+ + +I++AATNRP LDSAL Sbjct: 257 VFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSAL 316 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R+V V PD GRR+IL VH R L +D ++ D +A TPG GADL+N++ Sbjct: 317 MRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDL--DKIARRTPGFTGADLSNLL 374 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 NEAA+LAARR ++ +++ DAI+R Sbjct: 375 NEAAILAARRNLTEISMDEVNDAIDR 400
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 252 bits (644), Expect = 6e-67 Identities = 134/206 (65%), Positives = 159/206 (77%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKAVAGEAG+PFFS+S S+FVEMFVG GA+RVR LF++AK+AAP+I Sbjct: 223 VLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAI 282 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DAVG RG NDER+QTLNQLL EMDGF+ + +IV+AATNR LD AL Sbjct: 283 IFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPAL 342 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF RKV VG PD++GR IL VH + PL ED ++ LVA TPG VGADL N++ Sbjct: 343 LRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDL--KLVAQQTPGFVGADLENVL 400 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 NEAAL+AARR I+ DI +A +R Sbjct: 401 NEAALVAARRNKSIIDASDIDEAEDR 426
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 252 bits (644), Expect = 6e-67 Identities = 134/206 (65%), Positives = 159/206 (77%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKAVAGEAG+PFFS+S S+FVEMFVG GA+RVR LF++AK+AAP+I Sbjct: 223 VLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAI 282 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DAVG RG NDER+QTLNQLL EMDGF+ + +IV+AATNR LD AL Sbjct: 283 IFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPAL 342 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF RKV VG PD++GR IL VH + PL ED ++ LVA TPG VGADL N++ Sbjct: 343 LRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDL--KLVAQQTPGFVGADLENVL 400 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 NEAAL+AARR I+ DI +A +R Sbjct: 401 NEAALVAARRNKSIIDASDIDEAEDR 426
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 252 bits (643), Expect = 7e-67 Identities = 129/213 (60%), Positives = 161/213 (75%), Gaps = 3/213 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKA+AGEAG+PFFS+S SEFVEMFVG GA+RVRDLFK+AKE AP + Sbjct: 247 VLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCL 306 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +FIDE+DAVG RG + NDER+QTLNQLLTEMDGF+ + +IV+AATNRP LD AL Sbjct: 307 VFIDEIDAVGRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDLAL 366 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R+V V PD++GR ILA+H + L E+ ++ +A TPG GADLAN++ Sbjct: 367 LRPGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAA--IARRTPGFTGADLANVL 424 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKYGVNG 631 NEAA+ ARR + + ++ DAI+R G+ G Sbjct: 425 NEAAIFTARRRKEAITMAEVNDAIDRVVAGMEG 457
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 247 bits (631), Expect = 2e-65 Identities = 135/213 (63%), Positives = 157/213 (73%), Gaps = 5/213 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKA AGEAG+PFF +S SEFVE+FVG GAARVRDLF++AK+ AP I Sbjct: 210 VLLVGPPGTGKTLLAKAAAGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQAKKQAPCI 269 Query: 182 IFIDELDAVGGSRGRSF----NDERDQTLNQLLTEMDGFD-SDVKVIVMAATNRPKALDS 346 +FIDELDA+G SR NDER+QTLNQLLTEMDGF + VIV+AATNRP+ LD Sbjct: 270 VFIDELDAIGKSRASGAFMGGNDEREQTLNQLLTEMDGFSAAGATVIVLAATNRPETLDP 329 Query: 347 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 526 AL RPGRF R+V V PDL GR KIL ++ +K+ L D E+ +A TPG GADLAN Sbjct: 330 ALLRPGRFDRQVLVDRPDLAGRLKILEIYAKKIKL--DKEVELKNIATRTPGFAGADLAN 387 Query: 527 IVNEAALLAARRGGDIVAREDIMDAIEREKYGV 625 +VNEAALLAAR D V D +AIER G+ Sbjct: 388 LVNEAALLAARNKQDSVTEADFREAIERVVAGL 420
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 247 bits (631), Expect = 2e-65 Identities = 129/213 (60%), Positives = 160/213 (75%), Gaps = 3/213 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKA+AGEA PFFS+S SEFVEMFVG GA+RVRDLFK+AKE AP I Sbjct: 207 VLLVGPPGTGKTLLAKAIAGEASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPCI 266 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +FIDE+DAVG RG NDER+QTLNQLLTEMDGF D VIV+AATNR LDSAL Sbjct: 267 VFIDEIDAVGRQRGVGIGGGNDEREQTLNQLLTEMDGFSGDTGVIVVAATNRIDVLDSAL 326 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R++ V +P++ GR IL VH +K + +D ++ +++A TPG GADLAN++ Sbjct: 327 LRPGRFDRQIMVSLPNINGRLAILKVHSKKKKIHKD--VLLEVIARRTPGFSGADLANLL 384 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKYGVNG 631 NEAA+L RRG + ++I D+I++ G+ G Sbjct: 385 NEAAILTVRRGKVEITMKEIEDSIDKIIAGLEG 417
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 246 bits (629), Expect = 3e-65 Identities = 131/214 (61%), Positives = 161/214 (75%), Gaps = 3/214 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKA+AGEAG+PFFS+S SEFVEMFVG GA+RVRDLFK+AKE +P I Sbjct: 209 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCI 268 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +FIDE+DAVG RG NDER+QTLNQLLTEMDGF+ + +I++AATNR LD+AL Sbjct: 269 VFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAAL 328 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R+V V VPD++GR +IL VH R L D I +L+A TPG GADLAN++ Sbjct: 329 LRPGRFDRQVTVDVPDVKGRLEILNVHARNKKL--DLSISLELIAKRTPGFSGADLANLL 386 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKYGVNGR 634 NEAA+L ARR + +I +I+R G+ G+ Sbjct: 387 NEAAILTARRRKKQITISEIDASIDRVIAGMEGK 420
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 246 bits (628), Expect = 4e-65 Identities = 131/213 (61%), Positives = 158/213 (74%), Gaps = 3/213 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKA+AGEAG+PFFS+S SEFVEMFVG GA+RVRDLFK+AK+ AP I Sbjct: 209 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCI 268 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +FIDE+DAVG RG NDER+QTLNQLLTEMDGF+ + VIV+AATNR LDSAL Sbjct: 269 VFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSAL 328 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R+V V VPD GR IL VH + +E S++ + +A TPG GADLAN++ Sbjct: 329 LRPGRFDRQVSVDVPDFRGRLAILEVHAKNKKME--SKVSLETIARRTPGFSGADLANLL 386 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKYGVNG 631 NEAA+L ARR + +I +I+R G+ G Sbjct: 387 NEAAILTARRRKSAMTMSEIDTSIDRVVAGLEG 419
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 245 bits (625), Expect = 9e-65 Identities = 131/205 (63%), Positives = 157/205 (76%), Gaps = 3/205 (1%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 LL GPPGTGKTLLA+AVAGEAG+PFFS +ASEFVE+FVG GA+RVRDLF++AK AP I+ Sbjct: 299 LLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIV 358 Query: 185 FIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 FIDE+DAVG RG NDER+QT+NQLLTEMDGF + VIV+AATNRP LDSAL Sbjct: 359 FIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALL 418 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 RPGRF R+V V PD+ GR KIL VH R L +D + D VA TPG GADL N++N Sbjct: 419 RPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDF--DKVARRTPGFTGADLQNLMN 476 Query: 536 EAALLAARRGGDIVAREDIMDAIER 610 EAA+LAARR +++++I DA+ER Sbjct: 477 EAAILAARRELKEISKDEISDALER 501
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 244 bits (622), Expect = 2e-64 Identities = 127/214 (59%), Positives = 160/214 (74%), Gaps = 3/214 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F++AK+AAP I Sbjct: 188 VLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCI 247 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DAVG RG +DER+QTLNQ+L EMDGF+ + +IV+AATNRP LD AL Sbjct: 248 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPAL 307 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R+V VG+PD+ GR +IL VH+R+VPL D I ++A TPG GADLAN+V Sbjct: 308 LRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPD--IDAAIIARGTPGFSGADLANLV 365 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKYGVNGR 634 NEAAL AAR +V+ + A ++ G R Sbjct: 366 NEAALFAARGNKRVVSMVEFEKAKDKIMMGAERR 399
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 244 bits (622), Expect = 2e-64 Identities = 127/214 (59%), Positives = 160/214 (74%), Gaps = 3/214 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F++AK+AAP I Sbjct: 188 VLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCI 247 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DAVG RG +DER+QTLNQ+L EMDGF+ + +IV+AATNRP LD AL Sbjct: 248 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPAL 307 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R+V VG+PD+ GR +IL VH+R+VPL D I ++A TPG GADLAN+V Sbjct: 308 LRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATD--IDAAIIARGTPGFSGADLANLV 365 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKYGVNGR 634 NEAAL AAR +V+ + A ++ G R Sbjct: 366 NEAALFAARGNKRVVSMVEFEKAKDKIMMGAERR 399
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 244 bits (622), Expect = 2e-64 Identities = 127/214 (59%), Positives = 160/214 (74%), Gaps = 3/214 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F++AK+AAP I Sbjct: 188 VLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCI 247 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DAVG RG +DER+QTLNQ+L EMDGF+ + +IV+AATNRP LD AL Sbjct: 248 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPAL 307 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R+V VG+PD+ GR +IL VH+R+VPL D I ++A TPG GADLAN+V Sbjct: 308 LRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATD--IDAAIIARGTPGFSGADLANLV 365 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKYGVNGR 634 NEAAL AAR +V+ + A ++ G R Sbjct: 366 NEAALFAARGNKRVVSMVEFEKAKDKIMMGAERR 399
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 244 bits (622), Expect = 2e-64 Identities = 127/214 (59%), Positives = 160/214 (74%), Gaps = 3/214 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F++AK+AAP I Sbjct: 188 VLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCI 247 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DAVG RG +DER+QTLNQ+L EMDGF+ + +IV+AATNRP LD AL Sbjct: 248 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPAL 307 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R+V VG+PD+ GR +IL VH+R+VPL D I ++A TPG GADLAN+V Sbjct: 308 LRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPD--IDAAIIARGTPGFSGADLANLV 365 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKYGVNGR 634 NEAAL AAR +V+ + A ++ G R Sbjct: 366 NEAALFAARGNKRVVSMVEFEKAKDKIMMGAERR 399
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 244 bits (622), Expect = 2e-64 Identities = 127/214 (59%), Positives = 160/214 (74%), Gaps = 3/214 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F++AK+AAP I Sbjct: 188 VLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCI 247 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DAVG RG +DER+QTLNQ+L EMDGF+ + +IV+AATNRP LD AL Sbjct: 248 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPAL 307 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R+V VG+PD+ GR +IL VH+R+VPL D I ++A TPG GADLAN+V Sbjct: 308 LRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPD--IDAAIIARGTPGFSGADLANLV 365 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKYGVNGR 634 NEAAL AAR +V+ + A ++ G R Sbjct: 366 NEAALFAARGNKRVVSMVEFEKAKDKIMMGAERR 399
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 243 bits (620), Expect = 3e-64 Identities = 129/205 (62%), Positives = 157/205 (76%), Gaps = 3/205 (1%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 LL GPPGTGKTLLA+AVAGEAG+PFFS +ASEFVE+FVG GA+RVRDLF++AK AP I+ Sbjct: 290 LLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIV 349 Query: 185 FIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 FIDE+DAVG RG NDER+QT+NQLLTEMDGF + VIV+AATNRP LDSAL Sbjct: 350 FIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALL 409 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 RPGRF R+V V PD+ GR KIL VH R L +D + + +A TPG GADL N++N Sbjct: 410 RPGRFDRQVTVDRPDVAGRIKILQVHSRGKALTKDVDF--EKIARRTPGYTGADLQNLMN 467 Query: 536 EAALLAARRGGDIVAREDIMDAIER 610 EAA+LAARR +++++I DA+ER Sbjct: 468 EAAILAARRELKEISKDEISDALER 492
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 243 bits (620), Expect = 3e-64 Identities = 122/214 (57%), Positives = 159/214 (74%), Gaps = 3/214 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +L+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F+ +++ AP I Sbjct: 188 ILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKVAPCI 247 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DAVG RG +DER+QTLNQ+L EMDGFD + +I++AATNRP LD AL Sbjct: 248 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPAL 307 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R++FV +PD+ GR KI+ VH++KVPL + + + ++A TPG GADLAN+V Sbjct: 308 LRPGRFDRQIFVALPDIRGREKIIQVHMKKVPLGNNVDPM--IIARGTPGFSGADLANLV 365 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKYGVNGR 634 NEAAL AAR D+V D A ++ G R Sbjct: 366 NEAALFAARNNRDVVMMSDFESAKDKITMGSERR 399
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 243 bits (619), Expect = 5e-64 Identities = 127/213 (59%), Positives = 161/213 (75%), Gaps = 10/213 (4%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +L+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F+ A+++AP I Sbjct: 188 ILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHARKSAPCI 247 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DAVG RG +DER+QTLNQ+L EMDGFD + VI++AATNRP LD AL Sbjct: 248 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPAL 307 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R+V V +PD+ GR++IL VH+RKVPL ED + + ++A TPG GADLAN+V Sbjct: 308 LRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPM--IIARGTPGFSGADLANLV 365 Query: 533 NEAALLAARRGGDIV-------AREDIMDAIER 610 NEAAL AAR +V A++ IM ER Sbjct: 366 NEAALFAARFNNRVVSMIHFEKAKDKIMMGSER 398
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 242 bits (618), Expect = 6e-64 Identities = 129/205 (62%), Positives = 155/205 (75%), Gaps = 3/205 (1%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 LL GPPGTGKTLLA+AVAGEAG PFFS +ASEFVE+FVG GA+RVRDLF++AK AP I+ Sbjct: 290 LLVGPPGTGKTLLARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIV 349 Query: 185 FIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 FIDE+DAVG RG NDER+QT+NQLLTEMDGF + VIV+AATNRP LDSAL Sbjct: 350 FIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALL 409 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 RPGRF R+V V PD+ GR KIL VH R L +D + D +A TPG G DL N++N Sbjct: 410 RPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDF--DKIARRTPGFTGVDLQNLMN 467 Query: 536 EAALLAARRGGDIVAREDIMDAIER 610 EAA+LAARR +++++I DA+ER Sbjct: 468 EAAILAARRDLKEISKDEIADALER 492
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 242 bits (618), Expect = 6e-64 Identities = 131/211 (62%), Positives = 155/211 (73%), Gaps = 4/211 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKAVAGEAG+PF+S+S S+FVEMFVG GA+RVRDLF+ AK+ APSI Sbjct: 229 VLLEGPPGTGKTLLAKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFENAKKTAPSI 288 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSD-VKVIVMAATNRPKALDSA 349 IFIDE+DAVG RG NDER+QTLNQLL EMDGF D VIV+AATNR LD A Sbjct: 289 IFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFQDDGNSVIVIAATNRSDVLDPA 348 Query: 350 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 L RPGRF RKV VG PD++GR +L VH + PL D ++ VA TPG VGADL N+ Sbjct: 349 LLRPGRFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDL--HNVATQTPGYVGADLENV 406 Query: 530 VNEAALLAARRGGDIVAREDIMDAIEREKYG 622 +NEAAL+AAR+ + DI + ++R G Sbjct: 407 LNEAALVAARQNKKEINAADIDEGMDRAMAG 437
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 241 bits (614), Expect = 2e-63 Identities = 128/205 (62%), Positives = 157/205 (76%), Gaps = 3/205 (1%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 LL GPPGTGKTLLA+AVAGEAG+PFFS +ASEFVE+FVG GA+RVRDLF++AK AP I+ Sbjct: 287 LLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIV 346 Query: 185 FIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 FIDE+DAVG RG NDER+QT+NQLLTEMDGF + VIV+AATNRP LDSAL Sbjct: 347 FIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALL 406 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 RPGRF R+V V PD+ GR +IL VH R + +D + + VA TPG GADL N++N Sbjct: 407 RPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDY--EKVARRTPGFTGADLQNLMN 464 Query: 536 EAALLAARRGGDIVAREDIMDAIER 610 EAA+LAARR +++++I DA+ER Sbjct: 465 EAAILAARRELKEISKDEISDALER 489
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 240 bits (613), Expect = 2e-63 Identities = 128/210 (60%), Positives = 155/210 (73%), Gaps = 2/210 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLA+AVAGEA +PFF +S S+F+EMFVG GA+RVRDLFK+A+E AP I Sbjct: 177 VLLVGPPGTGKTLLARAVAGEASVPFFRISGSDFIEMFVGIGASRVRDLFKQAREKAPGI 236 Query: 182 IFIDELDAVGGSRGRSF--NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 IFIDELDA+G SR + NDER+QTLNQLL EMDGFD+ +I++AATNRP LD AL Sbjct: 237 IFIDELDAIGKSRLNAIHSNDEREQTLNQLLVEMDGFDNTTGLILLAATNRPDVLDPALL 296 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 RPGRF R+V V PDL+GR IL +H + V L E+ VA +T G GADLAN+VN Sbjct: 297 RPGRFDRQVCVDRPDLKGREAILRIHAQNVKLA--PEVDLKAVARITGGYSGADLANVVN 354 Query: 536 EAALLAARRGGDIVAREDIMDAIEREKYGV 625 EAALLA R G V D+ +A+E+ G+ Sbjct: 355 EAALLAVRSGRAQVIETDLDEAVEKTMIGL 384
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 240 bits (612), Expect = 3e-63 Identities = 127/213 (59%), Positives = 158/213 (74%), Gaps = 3/213 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKA+AGEA +PFFS+S SEFVEMFVG GA+RVRDLFK+AK+ AP + Sbjct: 190 VLLVGPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAPCL 249 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +FIDE+DAVG RG NDER+QTLNQLLTEMDGF+ + VIV+AATNR LD+AL Sbjct: 250 VFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRVDVLDAAL 309 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R++ V +PD++ R IL VH + L ++ + VA T G GADLAN++ Sbjct: 310 LRPGRFDRQIMVSMPDVKSRIAILKVHANQKKLH--PQVSLEAVARRTAGFAGADLANLL 367 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKYGVNG 631 NEAA+LA RRG + ++I DAI+R G+ G Sbjct: 368 NEAAILAVRRGLKQITWKEIDDAIDRVIAGMEG 400
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 240 bits (612), Expect = 3e-63 Identities = 127/205 (61%), Positives = 155/205 (75%), Gaps = 3/205 (1%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 LL GPPGTGKTLLA+AVAGEAG+PFFS +ASEFVE+FVG GA+RVR LF+ AK AP I+ Sbjct: 267 LLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAKSKAPCIV 326 Query: 185 FIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 FIDE+DAVG RG NDER+QT+NQLLTEMDGF + VIV+AATNRP LDSAL Sbjct: 327 FIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALL 386 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 RPG+F R+V V PD+ GR +IL VH R L +D + D +A TPG GADL N++N Sbjct: 387 RPGKFDRQVTVDRPDVAGRVRILQVHSRGKALAKDVDF--DKIARRTPGFTGADLQNLMN 444 Query: 536 EAALLAARRGGDIVAREDIMDAIER 610 EAA+LAARR +++++I DA+ER Sbjct: 445 EAAILAARRDLKEISKDEISDALER 469
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 239 bits (610), Expect = 5e-63 Identities = 127/212 (59%), Positives = 158/212 (74%), Gaps = 4/212 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL G PG GKTLLAKA+AGEA +PF SVS S+FVEMFVG GAARVRDLF+ AK+ AP I Sbjct: 191 VLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCI 250 Query: 182 IFIDELDAVGGSRGR----SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 349 IFIDE+DAVG +RG +DER+QTLNQLL EMDGFD+ +IV+AATNRP LD A Sbjct: 251 IFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPA 310 Query: 350 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 L RPGRF R++F+ PD+ GR +IL VH R L +D ++ + VA TPG GADL N+ Sbjct: 311 LLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDL--EFVARATPGFTGADLENL 368 Query: 530 VNEAALLAARRGGDIVAREDIMDAIEREKYGV 625 +NEAALLAAR+G + + E+I +A++R G+ Sbjct: 369 LNEAALLAARKGKEEITMEEIEEALDRITMGL 400
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 238 bits (608), Expect = 9e-63 Identities = 122/214 (57%), Positives = 160/214 (74%), Gaps = 3/214 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +L+ GPPGTGKTLLAKA+AGEA +PFF++S S+FVEMFVG GA+RVRD+F+ ++++AP I Sbjct: 188 ILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCI 247 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DAVG RG +DER+QTLNQ+L EMDGFD + +I++AATNRP LD AL Sbjct: 248 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPAL 307 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R+V V +PD+ GR +IL VH+RKVPL +D + + ++A TPG GADLAN+V Sbjct: 308 LRPGRFDRQVIVALPDIRGREQILKVHMRKVPLSKDVDPM--IIARGTPGFSGADLANLV 365 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKYGVNGR 634 NEAAL AAR +V+ + A ++ G R Sbjct: 366 NEAALFAARLDKRVVSMLEFERAKDKMMMGSERR 399
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 237 bits (605), Expect = 2e-62 Identities = 123/213 (57%), Positives = 159/213 (74%), Gaps = 3/213 (1%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 LL GPPGTGKTLLAKA+AGEA +PFFS+S S+FVEMFVG GA+RVRD+F++ K AP II Sbjct: 192 LLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCII 251 Query: 185 FIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 FIDE+DAVG RG NDER+QTLNQ+L EMDGF+++ V+++AATNRP LD AL Sbjct: 252 FIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALL 311 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 RPGRF R++ V PD+ GR +IL VHL+K+ + +S ++ ++A TPG GA+LAN+VN Sbjct: 312 RPGRFDRQIAVANPDINGREQILKVHLKKI--KYNSTVLARIIARGTPGFSGAELANLVN 369 Query: 536 EAALLAARRGGDIVAREDIMDAIEREKYGVNGR 634 EAAL+AAR G V D+ +A ++ GV R Sbjct: 370 EAALIAARLGKKEVDMHDMEEAKDKVLMGVARR 402
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 237 bits (605), Expect = 2e-62 Identities = 129/208 (62%), Positives = 155/208 (74%), Gaps = 5/208 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKAVAGEA +PFFS+ S F+EMFVG GA+RVRDLF AK+ APSI Sbjct: 212 VLLVGPPGTGKTLLAKAVAGEASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSI 271 Query: 182 IFIDELDAVGGSRGR----SFNDERDQTLNQLLTEMDGFDSD-VKVIVMAATNRPKALDS 346 IFIDE+DA+G SR S NDER+QTLNQLL EMDGF S+ VIV+AATNRP+ LD Sbjct: 272 IFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDP 331 Query: 347 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 526 AL RPGRF R+V V PD +GR +IL VH++ V L D ++ +A +T GL GADLAN Sbjct: 332 ALLRPGRFDRQVLVDKPDFKGRVEILKVHIKPVKLANDVDL--QEIAKLTAGLAGADLAN 389 Query: 527 IVNEAALLAARRGGDIVAREDIMDAIER 610 I+NEAALLA R V ++ + +A+ER Sbjct: 390 IINEAALLAGRNNQKEVKQQHLKEAVER 417
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 237 bits (604), Expect = 2e-62 Identities = 122/210 (58%), Positives = 158/210 (75%), Gaps = 3/210 (1%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 LL GPPGTGKTLLAKA+AGEA +PFFS+S S+FVEMFVG GA+RVRD+F++ K AP II Sbjct: 192 LLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCII 251 Query: 185 FIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 FIDE+DAVG RG NDER+QTLNQ+L EMDGF+++ V+++AATNRP LD AL Sbjct: 252 FIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALL 311 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 RPGRF R++ V PD+ GR +IL VHL+K+ + +S ++ ++A TPG GA+LAN+VN Sbjct: 312 RPGRFDRQIAVANPDINGREQILKVHLKKI--KYNSTVLARIIARGTPGFSGAELANLVN 369 Query: 536 EAALLAARRGGDIVAREDIMDAIEREKYGV 625 EAAL+AAR G V D+ +A ++ GV Sbjct: 370 EAALIAARLGKKEVDMHDMEEAKDKVLMGV 399
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 237 bits (604), Expect = 2e-62 Identities = 130/208 (62%), Positives = 154/208 (74%), Gaps = 5/208 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKAVAGEA +PFFS+ S F+EMFVG GA+RVRDLF+ AK+ APSI Sbjct: 206 VLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSI 265 Query: 182 IFIDELDAVGGSRGR----SFNDERDQTLNQLLTEMDGFDSD-VKVIVMAATNRPKALDS 346 IFIDE+DA+G SR S NDER+QTLNQLL EMDGF S+ VIV+AATNRP+ LD Sbjct: 266 IFIDEIDAIGKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDP 325 Query: 347 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 526 AL RPGRF R+V V PD GR +IL VH++ V L D + VA +T GL GADLAN Sbjct: 326 ALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNL--QEVAKLTAGLAGADLAN 383 Query: 527 IVNEAALLAARRGGDIVAREDIMDAIER 610 I+NEAALLA R V ++ + +A+ER Sbjct: 384 IINEAALLAGRNNQKEVRQQHLKEAVER 411
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 237 bits (604), Expect = 2e-62 Identities = 130/208 (62%), Positives = 154/208 (74%), Gaps = 5/208 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKAVAGEA +PFFS+ S F+EMFVG GA+RVRDLF+ AK+ APSI Sbjct: 206 VLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSI 265 Query: 182 IFIDELDAVGGSRGR----SFNDERDQTLNQLLTEMDGFDSD-VKVIVMAATNRPKALDS 346 IFIDE+DA+G SR S NDER+QTLNQLL EMDGF S+ VIV+AATNRP+ LD Sbjct: 266 IFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDP 325 Query: 347 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 526 AL RPGRF R+V V PD GR +IL VH++ V L D + VA +T GL GADLAN Sbjct: 326 ALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNL--QEVAKLTAGLAGADLAN 383 Query: 527 IVNEAALLAARRGGDIVAREDIMDAIER 610 I+NEAALLA R V ++ + +A+ER Sbjct: 384 IINEAALLAGRNNQKEVKQQHLKEAVER 411
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 236 bits (602), Expect = 4e-62 Identities = 127/213 (59%), Positives = 154/213 (72%), Gaps = 3/213 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTLLAKA+A EA +PFFSV+ SEFVEMF+G GAARVRDLFK+A E AP I Sbjct: 222 ILLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENAPCI 281 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +FIDE+DAVG RG NDER+QTLNQLLTEMDGF + VIV+ ATNR LD+AL Sbjct: 282 VFIDEIDAVGRERGAGVGGGNDEREQTLNQLLTEMDGFKENKGVIVVGATNRADILDAAL 341 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R+V V +PD GR IL VH R PL ED ++ +AN TPG GADLAN++ Sbjct: 342 LRPGRFDRQVTVNLPDRLGRVGILKVHARNKPLGEDVSLV--QLANRTPGFSGADLANLL 399 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKYGVNG 631 NEAA+LA R + + ++ +A +R G+ G Sbjct: 400 NEAAILATRYKKSSITKNEVNEAADRIIGGIAG 432
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 236 bits (601), Expect = 6e-62 Identities = 121/206 (58%), Positives = 155/206 (75%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLA+AVAGEAG+PFF++S S+FVEMFVG GA+RVRDLF++AK+ +P I Sbjct: 199 VLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCI 258 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF+DE+DAVG RG +DER+QTLNQLL EMDGF VI++AATNRP LD AL Sbjct: 259 IFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPAL 318 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R++ V PDL GRR +L VH + P+ D+++ D +A T G+ GADLAN++ Sbjct: 319 LRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADL--DGLAKRTVGMTGADLANVI 376 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 NEAALL AR G ++ + +A++R Sbjct: 377 NEAALLTARENGTVITGPALEEAVDR 402
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 236 bits (601), Expect = 6e-62 Identities = 121/206 (58%), Positives = 155/206 (75%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLA+AVAGEAG+PFF++S S+FVEMFVG GA+RVRDLF++AK+ +P I Sbjct: 199 VLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCI 258 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF+DE+DAVG RG +DER+QTLNQLL EMDGF VI++AATNRP LD AL Sbjct: 259 IFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPAL 318 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R++ V PDL GRR +L VH + P+ D+++ D +A T G+ GADLAN++ Sbjct: 319 LRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADL--DGLAKRTVGMTGADLANVI 376 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 NEAALL AR G ++ + +A++R Sbjct: 377 NEAALLTARENGTVITGPALEEAVDR 402
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 235 bits (600), Expect = 7e-62 Identities = 122/206 (59%), Positives = 155/206 (75%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLA+AVAGEAG+PFF++S S+FVEMFVG GA+RVRDLF +AK+ +P I Sbjct: 199 VLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQNSPCI 258 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF+DE+DAVG RG +DER+QTLNQLL EMDGF VI++AATNRP LD AL Sbjct: 259 IFVDEIDAVGRQRGTGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPAL 318 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R++ V PDL GRR +L VH + P+ +D+++ D +A T G+ GADLAN+V Sbjct: 319 LRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPIADDADL--DGLAKRTVGMTGADLANVV 376 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 NEAALL AR G ++ + +A++R Sbjct: 377 NEAALLTARENGLVITGPALEEAVDR 402
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 232 bits (592), Expect = 6e-61 Identities = 118/189 (62%), Positives = 150/189 (79%), Gaps = 3/189 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +L+ GPPGTGKTLLA+A+AGEA +PFF++S S+FVEMFVG GA+RVRD+F++AK+ AP + Sbjct: 187 ILMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCL 246 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DAVG RG +DER+QTLNQ+L EMDGF + VIV+AATNRP LD AL Sbjct: 247 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPAL 306 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R+V VG+PD++GR +IL VH+RKV + +D + + +A TPG GADLAN+V Sbjct: 307 TRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAM--TLARGTPGYSGADLANLV 364 Query: 533 NEAALLAAR 559 NEAAL AAR Sbjct: 365 NEAALFAAR 373
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 232 bits (591), Expect = 8e-61 Identities = 122/206 (59%), Positives = 152/206 (73%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLA+AVAGEAG+PFFS+S S+FVEMFVG GA+RVRDLF+ AK+ AP I Sbjct: 202 VLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCI 261 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DAVG RG +DER+QTLNQLL EMDGF ++ +I++AATNR LD AL Sbjct: 262 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPAL 321 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R++ V PD+ GR ++L VH R PL +D + +A TPG GADL N++ Sbjct: 322 LRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNL--KTIATRTPGFSGADLENLL 379 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 NEAAL+AAR ++ I +AI+R Sbjct: 380 NEAALVAARHDHTKISMIHIEEAIDR 405
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 230 bits (586), Expect = 3e-60 Identities = 123/211 (58%), Positives = 150/211 (71%), Gaps = 4/211 (1%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 +L+GPPGTGKTLLAKA AGEAG+PF+ VS SEFVEMFVG GAARVRDLFK A+E APSI+ Sbjct: 385 ILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIV 444 Query: 185 FIDELDAVGGSRGRS----FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 FIDE+DA+G +R + NDER+ TLNQ+L EMDGF V+V+A TNRP LD AL Sbjct: 445 FIDEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKAL 504 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R + + P+LEGR+ I AVHL + L + + + +A +TPG GAD+AN+ Sbjct: 505 LRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVC 564 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKYGV 625 NEAAL+AAR D V AIER GV Sbjct: 565 NEAALIAARSDEDAVKLNHFEQAIERVIGGV 595
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 228 bits (580), Expect = 2e-59 Identities = 121/206 (58%), Positives = 150/206 (72%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKA AGEAG+PFFS+S S+FVEMFVG GA+RVRDLF+ AK+ AP + Sbjct: 197 VLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCL 256 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DAVG RG +DER+QTLNQLL EMDGF ++ +I++AATNR LD AL Sbjct: 257 IFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPAL 316 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R++ V PD+ GR +L VH R PL+E + +A TPG GADL N++ Sbjct: 317 LRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNL--KSIAMRTPGFSGADLENLL 374 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 NEAAL+AAR+ + DI +A +R Sbjct: 375 NEAALVAARQNKKKIDARDIDEATDR 400
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 226 bits (577), Expect = 3e-59 Identities = 118/211 (55%), Positives = 149/211 (70%), Gaps = 9/211 (4%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 +L+GPPGTGKTLLAKA AGEA +PF SVS SEFVEMFVG GA+RVRDLF +A+ APSII Sbjct: 325 ILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSII 384 Query: 185 FIDELDAVGGSRGR-----SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 349 FIDE+DA+G RG+ NDER+ TLNQLL EMDGF + +V+V+A TNRP LD+A Sbjct: 385 FIDEIDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNA 444 Query: 350 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLE----EDSEIICDLVANVTPGLVGAD 517 L RPGRF R + + PD+ GR++I VHL+++ L+ +D + +A +TPG GAD Sbjct: 445 LMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGAD 504 Query: 518 LANIVNEAALLAARRGGDIVAREDIMDAIER 610 +AN NEAAL+AAR + AIER Sbjct: 505 IANACNEAALIAARHNDPYITIHHFEQAIER 535
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 224 bits (571), Expect = 2e-58 Identities = 115/207 (55%), Positives = 149/207 (71%), Gaps = 5/207 (2%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 +L GPPGTGKTLLAKA AGEA +PF +VS SEF+EMFVG G ARVRDLF A++ AP I+ Sbjct: 345 ILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCIL 404 Query: 185 FIDELDAVGGSRGR---SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 FIDE+DAVG RGR E++ TLNQLL EMDGF++ V+++A TNRP LD AL Sbjct: 405 FIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALL 464 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIICDLVANVTPGLVGADLANI 529 RPGRF R++F+G PD++GR I VHLR + L+ + + + +A++TPG GAD+AN+ Sbjct: 465 RPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANV 524 Query: 530 VNEAALLAARRGGDIVAREDIMDAIER 610 NEAAL+AAR D + ++ AIER Sbjct: 525 CNEAALIAARHLSDSINQKHFEQAIER 551
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 224 bits (571), Expect = 2e-58 Identities = 115/207 (55%), Positives = 148/207 (71%), Gaps = 5/207 (2%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 +L GPPGTGKTLLAKA AGEA +PF +VS SEF+EMFVG G ARVRDLF A++ AP I+ Sbjct: 344 ILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCIL 403 Query: 185 FIDELDAVGGSRGR---SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 FIDE+DAVG RGR E++ TLNQLL EMDGF++ V+++A TNRP LD AL Sbjct: 404 FIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALL 463 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIICDLVANVTPGLVGADLANI 529 RPGRF R++F+G PD++GR I VHLR + L+ + + + +A++TPG GAD+AN+ Sbjct: 464 RPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANV 523 Query: 530 VNEAALLAARRGGDIVAREDIMDAIER 610 NEAAL+AAR D + + AIER Sbjct: 524 CNEAALIAARHLSDAINEKHFEQAIER 550
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 223 bits (568), Expect = 4e-58 Identities = 116/210 (55%), Positives = 150/210 (71%), Gaps = 3/210 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTLLAKA AGEA +PFF +SAS FVE++VG GA RVR++FKEA++ AP+I Sbjct: 248 ILLGGPPGTGKTLLAKATAGEANVPFFFISASSFVELYVGLGAKRVREMFKEARKLAPAI 307 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDELDAVG SRG NDER+QTLNQ+L EMDG + + +++M ATNR LD AL Sbjct: 308 IFIDELDAVGRSRGSGIGGGNDEREQTLNQILVEMDGINENAGILIMGATNRTDVLDPAL 367 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R + VG+PD++ R +IL +H + L + EI D +A TPG GA L N++ Sbjct: 368 LRPGRFDRIITVGLPDIKEREEILKLHSKGKRLSK--EIKFDKIAKRTPGYSGAQLENVI 425 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKYG 622 NEA+LL+ R D++ I +AI+R G Sbjct: 426 NEASLLSVREKTDVIISTQIDEAIDRVMAG 455
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 218 bits (556), Expect = 9e-57 Identities = 114/209 (54%), Positives = 145/209 (69%), Gaps = 7/209 (3%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 +L GPPGTGKTLLAKA AGEA +PF +V+ SEF+EMFVG G ARVRD+F A++ AP I+ Sbjct: 211 MLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCIL 270 Query: 185 FIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 FIDE+DA+G RGR E++ TLNQ+L EMDGF+S V+V+A TNRP LD AL Sbjct: 271 FIDEIDAIGRKRGRGHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALT 330 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDL----VANVTPGLVGADLA 523 RPGRF R++++G PD++GR I VHLR PL+ D + D +A +TPG GAD++ Sbjct: 331 RPGRFDRQIYIGPPDIKGRSSIFKVHLR--PLKLDGSLSKDALSRKLAALTPGFTGADIS 388 Query: 524 NIVNEAALLAARRGGDIVAREDIMDAIER 610 N+ NEAAL+AAR V AIER Sbjct: 389 NVCNEAALIAARHLSPSVQERHFEQAIER 417
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 206 bits (525), Expect = 4e-53 Identities = 117/206 (56%), Positives = 139/206 (67%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 V+L GPPGTGKTLLAKAVAGEAG+PFF + S F +M VG GA RVRDLF +AK+AAP I Sbjct: 264 VILYGPPGTGKTLLAKAVAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCI 323 Query: 182 IFIDELDAVGGSRGR---SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+D+VG RGR S +QTLNQLL EMDGF S V+VMAATNR LD AL Sbjct: 324 IFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDAL 383 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R + + +PD++ R IL VH + L S+I VA TPG GA L N++ Sbjct: 384 LRPGRFDRHIQINLPDIKEREGILQVHAKNKNL--SSKISLLDVAKRTPGFSGAQLENVI 441 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 NEA LLA R + DI +AI+R Sbjct: 442 NEATLLAVRDNRTTINMNDIDEAIDR 467
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 205 bits (521), Expect = 1e-52 Identities = 117/206 (56%), Positives = 138/206 (66%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 V+L GPPGTGKTLLAKAVAGEAG+PFF + S F +M VG GA RVRDLF +AK+AAP I Sbjct: 267 VILYGPPGTGKTLLAKAVAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCI 326 Query: 182 IFIDELDAVGGSRGR---SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+D+VG RGR S +QTLNQLL EMDGF S V+VMAATNR LD AL Sbjct: 327 IFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDAL 386 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R + + +PD++ R IL VH L S+I VA TPG GA L N++ Sbjct: 387 LRPGRFDRHIQINLPDIKEREGILKVHAENKNL--SSKISLLDVAKRTPGFSGAQLENVI 444 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 NEA LLA R + DI +AI+R Sbjct: 445 NEATLLAVRDNRTTININDIDEAIDR 470
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 201 bits (511), Expect = 2e-51 Identities = 108/211 (51%), Positives = 144/211 (68%), Gaps = 7/211 (3%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLA+A AGEAG+ FF +S SEF E++VG GA R+RDLF +A+ AP+I Sbjct: 317 VLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAI 376 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDELDA+GG R QTLNQLL E+DGF +I++ ATN P+ALD AL RP Sbjct: 377 IFIDELDAIGGKRNPKDQAYAKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRP 436 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF + V V +PD+ GR IL H++K+ L ++ + ++A TPGL GA+LAN+VN+A Sbjct: 437 GRFDKVVNVDLPDVRGRADILKHHMKKITLADN--VDPTIIARGTPGLSGAELANLVNQA 494 Query: 542 ALLAARRGGDIV-------AREDIMDAIERE 613 A+ A ++ V A++ I+ ER+ Sbjct: 495 AVYACQKNAVSVDMSHFEWAKDKILMGAERK 525
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 200 bits (508), Expect = 3e-51 Identities = 110/206 (53%), Positives = 136/206 (66%), Gaps = 4/206 (1%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 LL GPPG GKTLLAKAVA EA +PF +++ EFVE+ G GAARVR LFKEA+ AP I+ Sbjct: 346 LLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIV 405 Query: 185 FIDELDAVGGSRGRSF----NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +IDE+DAVG R + N E +QTLNQLL EMDG + VIV+A+TNR LD AL Sbjct: 406 YIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGAL 465 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR R VF+ +P L+ RR+I HL+ + L + S +A +TPG GAD+ANI Sbjct: 466 MRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANIC 525 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 NEAAL AAR G V + A+ER Sbjct: 526 NEAALHAAREGHTSVHTLNFEYAVER 551
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 198 bits (504), Expect = 1e-50 Identities = 107/198 (54%), Positives = 142/198 (71%), Gaps = 1/198 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTLLA+AVAGEA +PF+ S SEF EMFVG GA+R+R+LF+EAK AP + Sbjct: 375 ILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCV 434 Query: 182 IFIDELDAVGGSRGRS-FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 358 IFIDELD+VGG R S + QT+NQLL EMDGF + VI++ ATN P+ALD+AL R Sbjct: 435 IFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIR 494 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 538 PGRF +V V PD++GR +IL +L K+ D + +++A T G GA+L N+VN+ Sbjct: 495 PGRFDMQVTVPRPDVKGRTEILKWYLNKIKF--DQSVDPEIIARGTVGFSGAELENLVNQ 552 Query: 539 AALLAARRGGDIVAREDI 592 AAL AA G ++V +++ Sbjct: 553 AALKAAVDGKEMVTMKEL 570
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 198 bits (504), Expect = 1e-50 Identities = 107/198 (54%), Positives = 142/198 (71%), Gaps = 1/198 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTLLA+AVAGEA +PF+ S SEF EMFVG GA+R+R+LF+EAK AP + Sbjct: 317 ILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCV 376 Query: 182 IFIDELDAVGGSRGRS-FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 358 IFIDELD+VGG R S + QT+NQLL EMDGF + VI++ ATN P+ALD+AL R Sbjct: 377 IFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIR 436 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 538 PGRF +V V PD++GR +IL +L K+ D + +++A T G GA+L N+VN+ Sbjct: 437 PGRFDMQVTVPRPDVKGRTEILKWYLNKIKF--DKSVDPEIIARGTVGFSGAELENLVNQ 494 Query: 539 AALLAARRGGDIVAREDI 592 AAL AA G ++V +++ Sbjct: 495 AALKAAVDGKEMVTMKEL 512
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 193 bits (490), Expect = 4e-49 Identities = 105/198 (53%), Positives = 140/198 (70%), Gaps = 1/198 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTLLA+AVAGEA +PF+ S SEF EMFVG GA+R+R+LF+EAK AP + Sbjct: 317 ILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCV 376 Query: 182 IFIDELDAVGGSRGR-SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 358 IFIDELD+VGG R + QT+ QLL EMDGF + VI++ ATN P+ALD+AL R Sbjct: 377 IFIDELDSVGGKRIEFPMHPYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIR 436 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 538 PGRF +V V PD++GR +IL +L K+ D + +++A T G GA+L N+VN+ Sbjct: 437 PGRFDMQVTVPRPDVKGRTEILKWYLNKIKF--DKSVDPEIIARGTVGFSGAELENLVNQ 494 Query: 539 AALLAARRGGDIVAREDI 592 AAL AA G ++V +++ Sbjct: 495 AALKAAVDGKEMVTMKEL 512
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 190 bits (482), Expect = 3e-48 Identities = 99/187 (52%), Positives = 130/187 (69%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKAVA EAG F+ ++ E + +VG +R +F+EA+E APSI Sbjct: 216 VLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSI 275 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDE+DA+ R + + + + QLLT MDG +V+V+ ATNRP ALD AL RP Sbjct: 276 IFIDEIDAIAPKRDEATGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRP 335 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF R++ +GVPD EGR++IL +H R +PL ED ++ D +A+VT G VGADLA + EA Sbjct: 336 GRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDL--DYLADVTHGFVGADLAALCKEA 393 Query: 542 ALLAARR 562 A+ A RR Sbjct: 394 AMRALRR 400 Score = 168 bits (425), Expect = 1e-41 Identities = 89/187 (47%), Positives = 119/187 (63%), Gaps = 1/187 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKAVA E+G F SV E +VG +R++F++A+++AP I Sbjct: 489 VLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCI 548 Query: 182 IFIDELDAVGGSRGRSFNDE-RDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 358 IF DE+DA+ RGR + D+ +NQLLTE+DG + V+V+AATNRP +D AL R Sbjct: 549 IFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLR 608 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 538 PGR R + V VPD + R I +H R + L ED + + +A T G GAD+ + E Sbjct: 609 PGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNL--EELAKKTEGYTGADIEALCRE 666 Query: 539 AALLAAR 559 AA+LA R Sbjct: 667 AAMLAVR 673
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 186 bits (471), Expect = 7e-47 Identities = 104/206 (50%), Positives = 134/206 (65%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKAVA A F ++A E V+ F+G GA VR+LF+ A+E APSI Sbjct: 216 VLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSI 275 Query: 182 IFIDELDAVGGSRGR---SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+G R R S + E +TL QLL EMDGFD + V+AATNR LD AL Sbjct: 276 IFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPAL 335 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R + + +PD EGR +I +H R + L ED ++ +A +T G GAD+ I Sbjct: 336 LRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDL--QKLAKITEGASGADIKAIC 393 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA ++A R DIV +D + A++R Sbjct: 394 TEAGMMAIREDRDIVTMDDFLKAVDR 419
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 184 bits (467), Expect = 2e-46 Identities = 104/206 (50%), Positives = 138/206 (66%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKT+LAKAVA E+ F V ASEF + FVG GA VR+LF+ AK APSI Sbjct: 171 VLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSI 230 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+G R G S E +TL QLL E+DGFD V ++AATNR LD AL Sbjct: 231 IFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPAL 290 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R + V +PD +GR +I ++L+K+ +E++ I +L++ +T G GAD+ N+ Sbjct: 291 LRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDN--INLELLSQLTEGFSGADIKNVC 348 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EAA +A R G + V D+++AI + Sbjct: 349 VEAAYMAIRDGRNKVTMNDLVEAINK 374
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 184 bits (467), Expect = 2e-46 Identities = 105/206 (50%), Positives = 134/206 (65%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKAVA E F + ASEFV ++G GA VR +F+ AKE +PSI Sbjct: 188 VLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSI 247 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DAV R +S E +TL QLL E+DGF+S V ++AATNRP LD AL Sbjct: 248 IFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPAL 307 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R + V +P+ +GRR+IL +H + L E+ +I +L+A +T G GADL I Sbjct: 308 LRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDI--ELLARITDGASGADLKAIC 365 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R D V D MDA+++ Sbjct: 366 TEAGMFAIRDERDEVTMADFMDAVDK 391
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 184 bits (466), Expect = 2e-46 Identities = 101/204 (49%), Positives = 136/204 (66%), Gaps = 1/204 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPG GKTLLAKAV+GEA +PF S S F E+ VG GA+R+R LF AK+ +P + Sbjct: 202 VLLVGPPGVGKTLLAKAVSGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPCL 261 Query: 182 IFIDELDAVGGSRGRS-FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 358 +FIDE+D+VGG+R S + +QT+NQLL EMDGF S +IV+ ATN+ + LD AL R Sbjct: 262 VFIDEIDSVGGNRTFSPHHPFANQTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALLR 321 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 538 PGRF ++ V P EGR +L ++L+KV + S I + +A+ T G GAD+ N+VN+ Sbjct: 322 PGRFDVQIHVSPPTYEGRIALLNLYLKKV--KTGSNIDIEKLAHGTVGYTGADIQNLVNQ 379 Query: 539 AALLAARRGGDIVAREDIMDAIER 610 AA+ AA R V + DA +R Sbjct: 380 AAIAAALRNDPFVEMHHLWDARDR 403
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 183 bits (465), Expect = 3e-46 Identities = 102/214 (47%), Positives = 137/214 (64%), Gaps = 3/214 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKAVAGE F V SE V F+G GA VR++F+ A+E APSI Sbjct: 176 VLLHGPPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSI 235 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +FIDE+DA+ R G S + E +T+ QLL E+DGFD V V+AATNR +D A+ Sbjct: 236 LFIDEIDAIASKRVDIGTSGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAV 295 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R + V +P L GR +IL +H RK + D ++ + +A +T G GADL +V Sbjct: 296 LRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDL--EAIAKLTEGFSGADLKAVV 353 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKYGVNGR 634 EA A RRG ++ +D++ A+E+ K ++ R Sbjct: 354 VEAGYNAIRRGSRVITMDDMIKAVEKVKAALDKR 387
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 182 bits (462), Expect = 7e-46 Identities = 103/206 (50%), Positives = 132/206 (64%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTLLAKAVA E F V SE V+ F+G GA+ V+D+FK AKE APSI Sbjct: 207 ILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSI 266 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+ R + + E +TL QLL EMDGFD+ V ++ ATNRP LD A+ Sbjct: 267 IFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAI 326 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R + V PD +GR +IL +H RK+ L ED + + +A +T G VGA+L I Sbjct: 327 LRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNL--EEIAKMTEGCVGAELKAIC 384 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R D V +D A+E+ Sbjct: 385 TEAGMNAIRELRDYVTMDDFRKAVEK 410
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 181 bits (460), Expect = 1e-45 Identities = 102/186 (54%), Positives = 127/186 (68%), Gaps = 1/186 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLA+A+AGEA +PFF + SEF E+ VG+GA RVRDLF +AK AP I Sbjct: 237 VLLVGPPGTGKTLLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCI 296 Query: 182 IFIDELDAVGGSR-GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 358 IFIDE+D+VG R S + +QT+NQLL+EMDGF + +IV+AATNR LD AL R Sbjct: 297 IFIDEIDSVGSKRVSNSIHPYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLR 356 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 538 PGRF +V V PDL GR I +L K+ I ++A + G GAD+ N+VN+ Sbjct: 357 PGRFDVRVTVPKPDLAGRVDIFNFYLSKI--VHSGGIDPKVLAKGSTGFTGADIENMVNQ 414 Query: 539 AALLAA 556 AAL AA Sbjct: 415 AALKAA 420
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 181 bits (460), Expect = 1e-45 Identities = 102/208 (49%), Positives = 135/208 (64%), Gaps = 3/208 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTL+AKAVA E F +S E + + G R+R++F+EAKE APSI Sbjct: 219 VLLYGPPGTGKTLIAKAVANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSI 278 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDE+D++ R + + + QLL MDG ++ VIV+AATNRP A+D AL RP Sbjct: 279 IFIDEIDSIAPKREEVTGEVERRVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRP 338 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF R++ +GVPD EGR++IL +H RK+PL ED ++ + +A +T G VGADL + EA Sbjct: 339 GRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDL--EELAELTNGFVGADLEALCKEA 396 Query: 542 ALLAARR---GGDIVAREDIMDAIEREK 616 A+ A RR DI A E + IE K Sbjct: 397 AMHALRRVLPEIDIEAEEIPAEVIENLK 424 Score = 155 bits (392), Expect = 9e-38 Identities = 82/187 (43%), Positives = 118/187 (63%), Gaps = 1/187 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTLLAKAVA E+ F SV E + +VG VR++F++A++ AP + Sbjct: 492 ILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCV 551 Query: 182 IFIDELDAVGGSRGRSFNDE-RDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 358 IF DE+D++ RG + ++ ++QLLTE+DG + V+V+AATNRP +D AL R Sbjct: 552 IFFDEIDSLAPRRGGIGDSHVTERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLR 611 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 538 PGR R +++ PD + R +I +HLR PL +D I + +A T G GAD+ + E Sbjct: 612 PGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNI--EELAEKTEGYSGADIEAVCRE 669 Query: 539 AALLAAR 559 A +LA R Sbjct: 670 AGMLAIR 676
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 181 bits (459), Expect = 2e-45 Identities = 102/208 (49%), Positives = 136/208 (65%), Gaps = 3/208 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKAVA E+ F V ASEF + FVG GA VR++F+ A+ APSI Sbjct: 171 VLLYGPPGTGKTLLAKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSI 230 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +FIDE+DA+G R G S E +TL QLL E+DGF V ++AATNR LD AL Sbjct: 231 VFIDEIDAIGAKRVDMGTSGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPAL 290 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R + V +P+ EGR++I ++L+K ++ D I D++A++T G GA++ N+ Sbjct: 291 LRPGRFDRLIEVPLPNFEGRKEIFRIYLQK--MKTDGNIRYDILASMTEGFSGAEIKNVC 348 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREK 616 EA +A R G V D++ AIE+ K Sbjct: 349 TEAGYIAIRNGRKYVNMTDLITAIEKIK 376
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 177 bits (449), Expect = 2e-44 Identities = 103/206 (50%), Positives = 129/206 (62%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPG GKTL+AKA+A E F V SE V ++G GA V +LF+ AKE AP+I Sbjct: 174 VLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTI 233 Query: 182 IFIDELDAVGGSR-GRSFNDERD--QTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+G R + ER+ +TL QLL EMDGFD V V+AATNRP LD AL Sbjct: 234 IFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPAL 293 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R + V +PD EGR +IL VH R++ L + L+A +T G GADL I Sbjct: 294 LRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLR---GVDLRLIAELTEGASGADLKAIA 350 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V +ED + AI++ Sbjct: 351 TEAGMFAIRERRTYVTQEDFLKAIDK 376
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 177 bits (448), Expect = 3e-44 Identities = 101/206 (49%), Positives = 130/206 (63%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPG GKTL+AKA+A E F V SE V ++G GA V +LF+ AKE AP+I Sbjct: 177 VLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTI 236 Query: 182 IFIDELDAVGGSR-GRSFNDERD--QTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+G R + ER+ +TL QLL EMDGFD V V+AATNRP LD AL Sbjct: 237 IFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPAL 296 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R + V +PD EGR +IL VH R++ L+ + ++A +T G GADL I Sbjct: 297 LRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLK---NVDLRVIAEITEGASGADLKAIA 353 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V +ED + A+++ Sbjct: 354 TEAGMFAIRERRTYVTQEDFLKAVDK 379
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 175 bits (444), Expect = 9e-44 Identities = 100/206 (48%), Positives = 128/206 (62%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKAVA E F V SE V+ F+G GA VRD+FK AKE +P I Sbjct: 185 VLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCI 244 Query: 182 IFIDELDAVGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DAV R S + E +TL QLL EMDGFDS V ++AATNRP LD A+ Sbjct: 245 IFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAI 304 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R + + +PD +GR +IL +H K+ L+ + VA + +VGADL + Sbjct: 305 LRPGRFDRIIEISMPDEDGRLEILKIHTEKMNLK---GVDLREVAKIAENMVGADLKAVC 361 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R + + +D +AI + Sbjct: 362 TEAGMFAIREEREFIKMDDFREAISK 387
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 175 bits (443), Expect = 1e-43 Identities = 92/187 (49%), Positives = 124/187 (66%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTLLA+A+A E G F +V+ E + F G R+R++FKEA+E APSI Sbjct: 249 ILLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSI 308 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDE+DA+ R + + + QLLT MDG +VIV+ ATNRP A+D AL RP Sbjct: 309 IFIDEIDAIAPKREDVTGEVEKRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRP 368 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF R++ + PD +GR+ IL VH R +P+ +D ++ D +A +T G GADLA + EA Sbjct: 369 GRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDL--DKLAEMTYGYTGADLAALAKEA 426 Query: 542 ALLAARR 562 A+ A RR Sbjct: 427 AIYALRR 433 Score = 162 bits (409), Expect = 1e-39 Identities = 87/187 (46%), Positives = 121/187 (64%), Gaps = 1/187 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKT+LAKAVA E+G F +V E + +VG +R++F++A++AAP++ Sbjct: 524 ILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTV 583 Query: 182 IFIDELDAVGGSRGRSFND-ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 358 IF DE+D++ RG S + ++ +NQLL EMDG KV+++AATNRP LD AL R Sbjct: 584 IFFDEIDSIAPIRGLSTDSGVTERIVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLR 643 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 538 PGRF R ++V PD R +IL VH + VPL ED + + +A G GADL +V E Sbjct: 644 PGRFDRLIYVPPPDKTARFEILKVHTKNVPLAED--VSLEDIAEKAEGYTGADLEALVRE 701 Query: 539 AALLAAR 559 A + A R Sbjct: 702 ATINAMR 708
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 174 bits (442), Expect = 2e-43 Identities = 101/206 (49%), Positives = 129/206 (62%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPG GKTL+AKA+A E F V SE V ++G GA V +LF+ AKE AP+I Sbjct: 177 VLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTI 236 Query: 182 IFIDELDAVGGSR-GRSFNDERD--QTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+G R + ER+ +TL QLL EMDGFD V V+AATNRP LD AL Sbjct: 237 IFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPAL 296 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R + V +PD EGR +IL VH R++ L+ + +A +T G GADL I Sbjct: 297 LRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLK---GVDLRAIAEMTEGASGADLKAIA 353 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V +ED + A+++ Sbjct: 354 TEAGMFAIRERRTYVTQEDFLKAVDK 379
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 174 bits (442), Expect = 2e-43 Identities = 97/206 (47%), Positives = 129/206 (62%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL G PGTGKTLLAKAVA F V SE V+ ++G G+ VR++F+ A++ APSI Sbjct: 196 VLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSI 255 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDELD++ R + E +TL QLL EMDGFD + ++AATNRP LD A+ Sbjct: 256 IFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAI 315 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R V V +P +E R KIL +H K+ L ED + +A T G+ GADL I Sbjct: 316 LRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDF--KKLAKATEGMSGADLKAIA 373 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A RR ++V E+ ++A+E+ Sbjct: 374 TEAGMFAVRRDKELVEMEEFLEAVEK 399
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 174 bits (442), Expect = 2e-43 Identities = 101/206 (49%), Positives = 129/206 (62%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPG GKTL+AKAVA F V SE V F+G GA V +LF+ AKE AP+I Sbjct: 175 VLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTI 234 Query: 182 IFIDELDAVGGSR-GRSFNDERD--QTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+G R + ER+ +TL QLL EMDGFD V V+AATNRP LD AL Sbjct: 235 IFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPAL 294 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R + V +PD +GR +IL VH RK+ L+ + ++A +T G GADL I Sbjct: 295 LRPGRFDRLIEVPLPDYQGRLEILKVHTRKMNLK---GVDLRVIAEITEGASGADLKAIA 351 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V ++D + A+++ Sbjct: 352 TEAGMFAIRDRRTYVTQDDFLKAVDK 377
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 174 bits (441), Expect = 2e-43 Identities = 93/196 (47%), Positives = 130/196 (66%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP+I Sbjct: 241 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI 300 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDELDA+ R ++ + + ++QLLT MDG VIVMAATNRP ++D AL R Sbjct: 301 IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF 360 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF R+V +G+PD GR +IL +H + + L +D ++ + VAN T G VGADLA + +EA Sbjct: 361 GRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDL--EQVANETHGHVGADLAALCSEA 418 Query: 542 ALLAARRGGDIVARED 589 AL A R+ D++ ED Sbjct: 419 ALQAIRKKMDLIDLED 434 Score = 159 bits (403), Expect = 5e-39 Identities = 86/208 (41%), Positives = 123/208 (59%), Gaps = 3/208 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL GPPG GKTLLAKA+A E F S+ E + M+ G A VR++F +A++AAP + Sbjct: 514 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCV 573 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +F DELD++ +RG + D D+ +NQ+LTEMDG V ++ ATNRP +D A+ Sbjct: 574 LFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAI 633 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR + +++ +PD + R IL +LRK P+ +D ++ D +A +T G GADL I Sbjct: 634 LRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDV--DFLAKMTNGFSGADLTEIC 691 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREK 616 A LA RE I + I RE+ Sbjct: 692 QRACKLA--------IRESIENEIRRER 711
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 174 bits (441), Expect = 2e-43 Identities = 93/196 (47%), Positives = 130/196 (66%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP+I Sbjct: 240 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI 299 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDELDA+ R ++ + + ++QLLT MDG VIVMAATNRP ++D AL R Sbjct: 300 IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF 359 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF R+V +G+PD GR +IL +H + + L +D ++ + VAN T G VGADLA + +EA Sbjct: 360 GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALCSEA 417 Query: 542 ALLAARRGGDIVARED 589 AL A R+ D++ ED Sbjct: 418 ALQAIRKKMDLIDLED 433 Score = 157 bits (398), Expect = 2e-38 Identities = 85/208 (40%), Positives = 123/208 (59%), Gaps = 3/208 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL GPPG GKTLLAKA+A E F S+ E + M+ G A VR++F +A++AAP + Sbjct: 513 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCV 572 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +F DELD++ +RG + D D+ +NQ+LTEMDG + V ++ ATNRP +D A+ Sbjct: 573 LFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAI 632 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR + +++ +PD + R IL +LRK P+ +D ++ + +A +T G GADL I Sbjct: 633 LRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDL--EFLAKMTNGFSGADLTEIC 690 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREK 616 A LA RE I I RE+ Sbjct: 691 QRACKLA--------IRESIESEIRRER 710
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 174 bits (441), Expect = 2e-43 Identities = 93/196 (47%), Positives = 130/196 (66%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP+I Sbjct: 240 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI 299 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDELDA+ R ++ + + ++QLLT MDG VIVMAATNRP ++D AL R Sbjct: 300 IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF 359 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF R+V +G+PD GR +IL +H + + L +D ++ + VAN T G VGADLA + +EA Sbjct: 360 GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALCSEA 417 Query: 542 ALLAARRGGDIVARED 589 AL A R+ D++ ED Sbjct: 418 ALQAIRKKMDLIDLED 433 Score = 157 bits (398), Expect = 2e-38 Identities = 85/208 (40%), Positives = 123/208 (59%), Gaps = 3/208 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL GPPG GKTLLAKA+A E F S+ E + M+ G A VR++F +A++AAP + Sbjct: 513 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCV 572 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +F DELD++ +RG + D D+ +NQ+LTEMDG + V ++ ATNRP +D A+ Sbjct: 573 LFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAI 632 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR + +++ +PD + R IL +LRK P+ +D ++ + +A +T G GADL I Sbjct: 633 LRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDL--EFLAKMTNGFSGADLTEIC 690 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREK 616 A LA RE I I RE+ Sbjct: 691 QRACKLA--------IRESIESEIRRER 710
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 174 bits (441), Expect = 2e-43 Identities = 93/196 (47%), Positives = 130/196 (66%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP+I Sbjct: 240 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI 299 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDELDA+ R ++ + + ++QLLT MDG VIVMAATNRP ++D AL R Sbjct: 300 IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF 359 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF R+V +G+PD GR +IL +H + + L +D ++ + VAN T G VGADLA + +EA Sbjct: 360 GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALCSEA 417 Query: 542 ALLAARRGGDIVARED 589 AL A R+ D++ ED Sbjct: 418 ALQAIRKKMDLIDLED 433 Score = 157 bits (398), Expect = 2e-38 Identities = 85/208 (40%), Positives = 123/208 (59%), Gaps = 3/208 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL GPPG GKTLLAKA+A E F S+ E + M+ G A VR++F +A++AAP + Sbjct: 513 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCV 572 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +F DELD++ +RG + D D+ +NQ+LTEMDG + V ++ ATNRP +D A+ Sbjct: 573 LFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAI 632 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR + +++ +PD + R IL +LRK P+ +D ++ + +A +T G GADL I Sbjct: 633 LRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDL--EFLAKMTNGFSGADLTEIC 690 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREK 616 A LA RE I I RE+ Sbjct: 691 QRACKLA--------IRESIESEIRRER 710
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 174 bits (441), Expect = 2e-43 Identities = 93/196 (47%), Positives = 130/196 (66%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP+I Sbjct: 240 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI 299 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDELDA+ R ++ + + ++QLLT MDG VIVMAATNRP ++D AL R Sbjct: 300 IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF 359 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF R+V +G+PD GR +IL +H + + L +D ++ + VAN T G VGADLA + +EA Sbjct: 360 GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDL--EQVANETHGHVGADLAALCSEA 417 Query: 542 ALLAARRGGDIVARED 589 AL A R+ D++ ED Sbjct: 418 ALQAIRKKMDLIDLED 433 Score = 157 bits (398), Expect = 2e-38 Identities = 85/208 (40%), Positives = 123/208 (59%), Gaps = 3/208 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL GPPG GKTLLAKA+A E F S+ E + M+ G A VR++F +A++AAP + Sbjct: 513 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCV 572 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +F DELD++ +RG + D D+ +NQ+LTEMDG + V ++ ATNRP +D A+ Sbjct: 573 LFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAI 632 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR + +++ +PD + R IL +LRK P+ +D ++ + +A +T G GADL I Sbjct: 633 LRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDL--EFLAKMTNGFSGADLTEIC 690 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREK 616 A LA RE I I RE+ Sbjct: 691 QRACKLA--------IRESIESEIRRER 710
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 172 bits (437), Expect = 6e-43 Identities = 89/206 (43%), Positives = 130/206 (63%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 ++L GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ I Sbjct: 216 IMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACI 275 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF DE+DA+GG+R G ++E +T+ +L+T++DGFD + V+ ATNRP LD AL Sbjct: 276 IFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEAL 335 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RKV G+PDLEGR IL +H + + +++D I +L+A + P GA+L ++ Sbjct: 336 MRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKD--IRWELIARLCPSQTGAELRSVC 393 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R + +D +DA+++ Sbjct: 394 TEAGMFAIRARRRVATEKDFLDAVQK 419
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 172 bits (435), Expect = 1e-42 Identities = 93/206 (45%), Positives = 129/206 (62%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLA+AVA G+ F V +S V+ ++G A +R++F AKE P + Sbjct: 169 VLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCV 228 Query: 182 IFIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF+DE+DA+GG S G S + E +TL +LL +MDGFD + ++ ATNRP LD AL Sbjct: 229 IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPAL 288 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ + +P+ GR +IL +HL KV + EI + + +T G GADL N+V Sbjct: 289 LRPGRLDRKIEIPLPNEVGRMEILKIHLEKV--SKQGEIDYEALVKLTDGTNGADLRNVV 346 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA +A + D V + D+M A + Sbjct: 347 TEAGFIAIKEDRDYVIQSDLMSAARK 372
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 171 bits (434), Expect = 1e-42 Identities = 97/206 (47%), Positives = 128/206 (62%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL G PGTGKTLLAKAVA F V SE V+ ++G G+ VR++F+ A++ APSI Sbjct: 196 VLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSI 255 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDELD++ R + E +TL QLL EMDGFD + ++AATNRP LD A+ Sbjct: 256 IFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAI 315 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R V V +P +E R KIL +H K+ L D + +A VT G+ GADL I Sbjct: 316 LRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDF--KKLAKVTEGMSGADLKAIA 373 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R+ +V ED ++A+E+ Sbjct: 374 TEAGMFAVRKDKALVEMEDFLEAVEK 399
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 170 bits (431), Expect = 3e-42 Identities = 90/187 (48%), Positives = 125/187 (66%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKAVA E FFS++ E + + G ++R++F++AK+ +PSI Sbjct: 226 VLLHGPPGTGKTLLAKAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSI 285 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDELD++ R + + + QLLT MDG + +VIV+AATNR A+D AL RP Sbjct: 286 IFIDELDSIAPKREDVTGEVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRP 345 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF R++ +GVPD GR +IL +H R +PL +D + +A+ T G VGAD+ ++ EA Sbjct: 346 GRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNL--STLADDTHGFVGADIESLSKEA 403 Query: 542 ALLAARR 562 A+ A RR Sbjct: 404 AMRALRR 410 Score = 163 bits (412), Expect = 5e-40 Identities = 89/191 (46%), Positives = 122/191 (63%), Gaps = 1/191 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTL+AKAVA E F SV + + +VG +R F++A++ AP++ Sbjct: 499 VLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTV 558 Query: 182 IFIDELDAVGGSRGRSF-NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 358 IF DELD++ RG++ N+ ++ +NQLLTE+DG + +V+V+AATNRP +D AL R Sbjct: 559 IFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALIR 618 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 538 GRF R V VG P +EGR +IL +H + PL D + +A G VG+DLANI E Sbjct: 619 SGRFDRLVQVGQPGIEGREQILKIHTQDTPLAAD--VSLRELAERADGYVGSDLANIARE 676 Query: 539 AALLAARRGGD 571 AA+ A R D Sbjct: 677 AAIEALRDDED 687
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 169 bits (429), Expect = 5e-42 Identities = 89/190 (46%), Positives = 126/190 (66%), Gaps = 3/190 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 V+L GPPGTGKTL+A+AVA E+G F S++ E + + G+ ++R++F +A+E APSI Sbjct: 227 VILYGPPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSI 286 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDE+D++ R + + + QLLT MDG VIV+ ATNR A+D AL RP Sbjct: 287 IFIDEIDSIAPKREEVQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRP 346 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPL---EEDSEIICDLVANVTPGLVGADLANIV 532 GRF R++ +GVPD GR++IL +H R +PL EE+ + +A+ T G VGADLA +V Sbjct: 347 GRFDREIEIGVPDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALV 406 Query: 533 NEAALLAARR 562 E+A+ A RR Sbjct: 407 RESAMNALRR 416 Score = 159 bits (402), Expect = 7e-39 Identities = 86/204 (42%), Positives = 129/204 (63%), Gaps = 3/204 (1%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 LL GPPG GKTLLAKAVA E+ F S+ E + +VG +R++FK+AK+ AP+I+ Sbjct: 505 LLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIV 564 Query: 185 FIDELDAVGGSRG-RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 F+DE+D++ RG S + ++ +NQLLT +DG + V+V+ ATNRP +D AL R Sbjct: 565 FLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLRA 624 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF + +++ PD E R IL VH + +PL D ++ + +A T G VGADL N+ EA Sbjct: 625 GRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDL--NDIAQRTEGYVGADLENLCREA 682 Query: 542 ALLAARRGGDI--VAREDIMDAIE 607 + A R D V++++ +DA++ Sbjct: 683 GMNAYRENPDATSVSQKNFLDALK 706
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 168 bits (425), Expect = 1e-41 Identities = 100/206 (48%), Positives = 124/206 (60%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKAVA + F V SEFV+ ++G GA VR++F+ AKE APSI Sbjct: 178 VLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSI 237 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDELDA+ R S E +T+ QLL E+DGFD V V+ ATNR LD A+ Sbjct: 238 IFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAI 297 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R + V +P EGR +I +H RK+ L ED + +A +T G GAD+ I Sbjct: 298 LRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDF--KELARITEGASGADIKAIC 355 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V D AIE+ Sbjct: 356 TEAGMFAIREERAKVTMLDFTKAIEK 381
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 167 bits (424), Expect = 2e-41 Identities = 90/206 (43%), Positives = 127/206 (61%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL GPPGTGKTLLA+AVA F V SE V+ +VG GA VR+LF+ A+ I Sbjct: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +F DE+DA+GG+R G ++E +T+ +++ ++DGFD+ + V+ ATNRP LD AL Sbjct: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RKV G+PDLEGR +I +H R + E D I +L+A + P GAD+ ++ Sbjct: 325 LRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERD--IRFELLARLCPNSTGADIRSVC 382 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V +D +DA+ + Sbjct: 383 TEAGMYAIRARRKTVTEKDFLDAVNK 408
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 167 bits (424), Expect = 2e-41 Identities = 90/206 (43%), Positives = 127/206 (61%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL GPPGTGKTLLA+AVA F V SE V+ +VG GA VR+LF+ A+ I Sbjct: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +F DE+DA+GG+R G ++E +T+ +++ ++DGFD+ + V+ ATNRP LD AL Sbjct: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RKV G+PDLEGR +I +H R + E D I +L+A + P GAD+ ++ Sbjct: 325 LRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERD--IRFELLARLCPNSTGADIRSVC 382 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V +D +DA+ + Sbjct: 383 TEAGMYAIRARRKTVTEKDFLDAVNK 408
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 166 bits (421), Expect = 4e-41 Identities = 90/204 (44%), Positives = 131/204 (64%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPG+GKTL+A+AVA E G FF ++ E + G + +R F+EA++ APSI Sbjct: 244 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSI 303 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDE+D++ R ++ + + ++QLLT MDG S VIVM ATNRP ++D AL R Sbjct: 304 IFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRF 363 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF R++ +GVPD GR ++L +H + + L ED ++ + ++ T G VGADLA + EA Sbjct: 364 GRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDL--ERISKDTHGYVGADLAALCTEA 421 Query: 542 ALLAARRGGDIVAREDIMDAIERE 613 AL R D++ ED D+I+ E Sbjct: 422 ALQCIREKMDVIDLED--DSIDAE 443 Score = 155 bits (393), Expect = 7e-38 Identities = 88/209 (42%), Positives = 120/209 (57%), Gaps = 4/209 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL GPPG GKTLLAKA+A E F SV E + M+ G A VR++F +A+++AP + Sbjct: 517 VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCV 576 Query: 182 IFIDELDAV----GGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 349 +F DELD++ GG G D+ LNQLLTEMDG ++ V ++ ATNRP +DSA Sbjct: 577 LFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSA 636 Query: 350 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 L RPGR + +++ +PD + R I LRK P+ +D +I +A T G GAD+ I Sbjct: 637 LLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDI--GALAKYTQGFSGADITEI 694 Query: 530 VNEAALLAARRGGDIVAREDIMDAIEREK 616 A A RE+I IE+EK Sbjct: 695 CQRACKYA--------IRENIEKDIEKEK 715
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 166 bits (421), Expect = 4e-41 Identities = 90/204 (44%), Positives = 131/204 (64%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPG+GKTL+A+AVA E G FF ++ E + G + +R F+EA++ APSI Sbjct: 244 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSI 303 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDE+D++ R ++ + + ++QLLT MDG S VIVM ATNRP ++D AL R Sbjct: 304 IFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRF 363 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF R++ +GVPD GR ++L +H + + L ED ++ + ++ T G VGADLA + EA Sbjct: 364 GRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDL--ERISKDTHGYVGADLAALCTEA 421 Query: 542 ALLAARRGGDIVAREDIMDAIERE 613 AL R D++ ED D+I+ E Sbjct: 422 ALQCIREKMDVIDLED--DSIDAE 443 Score = 155 bits (393), Expect = 7e-38 Identities = 87/208 (41%), Positives = 120/208 (57%), Gaps = 3/208 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL GPPG GKTLLAKA+A E F SV E + M+ G A VR++F +A+++AP + Sbjct: 517 VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCV 576 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +F DELD++ RG S D D+ LNQLLTEMDG ++ V ++ ATNRP +DSAL Sbjct: 577 LFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSAL 636 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR + +++ +PD + R I LRK P+ +D ++ +A T G GAD+ I Sbjct: 637 LRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTA--LAKYTQGFSGADITEIC 694 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREK 616 A A RE+I IE E+ Sbjct: 695 QRACKYA--------IRENIEKDIENER 714
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 166 bits (420), Expect = 5e-41 Identities = 88/205 (42%), Positives = 127/205 (61%), Gaps = 3/205 (1%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 LL GPPGTGKTLLA+AVA + F V +S V+ ++G A +R++F A++ P II Sbjct: 171 LLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCII 230 Query: 185 FIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 F+DE+DA+GG S G S + E +TL +LL +MDGFD+ +V ++ ATNRP LD AL Sbjct: 231 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALL 290 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 RPGR RK+ + +P+ + R IL +H P+ + EI + + ++ G GADL N+ Sbjct: 291 RPGRLDRKIHIDLPNEQARLDILKIHAG--PITKHGEIDYEAIVKLSDGFNGADLRNVCT 348 Query: 536 EAALLAARRGGDIVAREDIMDAIER 610 EA + A R D V +ED M A+ + Sbjct: 349 EAGMFAIRADHDFVVQEDFMKAVRK 373
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 166 bits (420), Expect = 5e-41 Identities = 88/205 (42%), Positives = 127/205 (61%), Gaps = 3/205 (1%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 LL GPPGTGKTLLA+AVA + F V +S V+ ++G A +R++F A++ P II Sbjct: 171 LLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCII 230 Query: 185 FIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 F+DE+DA+GG S G S + E +TL +LL +MDGFD+ +V ++ ATNRP LD AL Sbjct: 231 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALL 290 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 RPGR RK+ + +P+ + R IL +H P+ + EI + + ++ G GADL N+ Sbjct: 291 RPGRLDRKIHIDLPNEQARLDILKIHAG--PITKHGEIDYEAIVKLSDGFNGADLRNVCT 348 Query: 536 EAALLAARRGGDIVAREDIMDAIER 610 EA + A R D V +ED M A+ + Sbjct: 349 EAGMFAIRADHDFVVQEDFMKAVRK 373
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 166 bits (420), Expect = 5e-41 Identities = 88/205 (42%), Positives = 127/205 (61%), Gaps = 3/205 (1%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 LL GPPGTGKTLLA+AVA + F V +S V+ ++G A +R++F A++ P II Sbjct: 171 LLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCII 230 Query: 185 FIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 F+DE+DA+GG S G S + E +TL +LL +MDGFD+ +V ++ ATNRP LD AL Sbjct: 231 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALL 290 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 RPGR RK+ + +P+ + R IL +H P+ + EI + + ++ G GADL N+ Sbjct: 291 RPGRLDRKIHIDLPNEQARLDILKIHAG--PITKHGEIDYEAIVKLSDGFNGADLRNVCT 348 Query: 536 EAALLAARRGGDIVAREDIMDAIER 610 EA + A R D V +ED M A+ + Sbjct: 349 EAGMFAIRADHDFVVQEDFMKAVRK 373
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 166 bits (419), Expect = 7e-41 Identities = 89/206 (43%), Positives = 127/206 (61%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ + Sbjct: 214 VLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACL 273 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF DE+DAVGG+R G+ ++E +T+ +L+ ++DGFD + V+ ATNRP LD AL Sbjct: 274 IFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPAL 333 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RKV +PDL GR IL +H +++ +E D I DL+A + P GA++ ++ Sbjct: 334 MRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERD--IRYDLLARLCPNSTGAEIRSVC 391 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R + +D ++AI + Sbjct: 392 TEAGMFAIRARRKVATEKDFLEAINK 417
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 166 bits (419), Expect = 7e-41 Identities = 89/205 (43%), Positives = 127/205 (61%), Gaps = 3/205 (1%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 LL GPPGTGKTLLA+AVA + F V +S V+ ++G A +R++F A++ P I+ Sbjct: 188 LLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIV 247 Query: 185 FIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 F+DE+DA+GG S G S + E +TL +LL ++DGFDS KV V+ ATNRP LD AL Sbjct: 248 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALL 307 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 RPGR RK+ +G+P+ + R +IL +H K+ + EI + V ++ G ADL N+ Sbjct: 308 RPGRLDRKIEIGLPNEQSRLEILKIHSNKI--TKHGEIDFEAVVKLSDGFSAADLRNVCT 365 Query: 536 EAALLAARRGGDIVAREDIMDAIER 610 EA + A R + V ED M A+ + Sbjct: 366 EAGMFAIRAEREFVIDEDFMKAVRK 390
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 165 bits (418), Expect = 9e-41 Identities = 90/204 (44%), Positives = 129/204 (63%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPG+GKTL+A+AVA E G FF ++ E + G + +R F+EA++ APSI Sbjct: 245 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSI 304 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDE+D++ R ++ + + ++QLLT MDG S VIVM ATNRP ++D AL R Sbjct: 305 IFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRF 364 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF R++ +GVPD GR ++L +H + + L E E+ + ++ T G VGADLA + EA Sbjct: 365 GRFDREIDIGVPDEVGRLEVLGIHTKNMKLAE--EVDLERISKDTHGYVGADLAALCTEA 422 Query: 542 ALLAARRGGDIVAREDIMDAIERE 613 AL R D++ ED D I+ E Sbjct: 423 ALQCIREKMDVLDLED--DTIDAE 444 Score = 157 bits (396), Expect = 3e-38 Identities = 89/208 (42%), Positives = 121/208 (58%), Gaps = 3/208 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL GPPG GKTLLAKA+A E F SV E + M+ G A VR++F +A+++AP + Sbjct: 518 VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCV 577 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +F DELD++ RG S D D+ LNQLLTEMDG ++ V ++ ATNRP +D AL Sbjct: 578 LFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPAL 637 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR + +++ +PD + R +I LRK PL +D ++ +A T G GAD+ I Sbjct: 638 LRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDL--RALAKHTQGFSGADVTEIC 695 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREK 616 A A RE+I IEREK Sbjct: 696 QRACKYA--------IRENIEKDIEREK 715
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 165 bits (418), Expect = 9e-41 Identities = 89/206 (43%), Positives = 126/206 (61%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL GPPGTGKTLLA+AVA F V SE V+ +VG GA VR+LF+ A+ I Sbjct: 204 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 263 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +F DE+DA+GG+R G ++E +T+ +++ ++DGFD+ + V+ ATNRP LD AL Sbjct: 264 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 323 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RKV G+PDLE R +I +H R + E D I +L+A + P GAD+ ++ Sbjct: 324 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD--IRFELLARLCPNSTGADIRSVC 381 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V +D +DA+ + Sbjct: 382 TEAGMYAIRARRKTVTEKDFLDAVNK 407
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 165 bits (418), Expect = 9e-41 Identities = 89/206 (43%), Positives = 126/206 (61%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL GPPGTGKTLLA+AVA F V SE V+ +VG GA VR+LF+ A+ I Sbjct: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +F DE+DA+GG+R G ++E +T+ +++ ++DGFD+ + V+ ATNRP LD AL Sbjct: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RKV G+PDLE R +I +H R + E D I +L+A + P GAD+ ++ Sbjct: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD--IRFELLARLCPNSTGADIRSVC 382 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V +D +DA+ + Sbjct: 383 TEAGMYAIRARRKTVTEKDFLDAVNK 408
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 165 bits (417), Expect = 1e-40 Identities = 88/206 (42%), Positives = 125/206 (60%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ I Sbjct: 246 ILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACI 305 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF DE+DAVGG+R G ++E +T+ +L+T++DGFD + VM ATNRP LD AL Sbjct: 306 IFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPAL 365 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RKV +PDLEGR I +H + + +E I +L++ + P GA+L ++ Sbjct: 366 LRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERG--IRWELISRLCPNSTGAELRSVC 423 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R + +D + A+++ Sbjct: 424 TEAGMFAIRARRKVATEKDFLKAVDK 449
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 165 bits (417), Expect = 1e-40 Identities = 86/196 (43%), Positives = 126/196 (64%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPG+GKTL+A+AVA E G FF ++ E + G + +R F+EA++ APSI Sbjct: 245 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSI 304 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDE+D++ R ++ + + ++QLLT MDG S VIV+ ATNRP ++D AL R Sbjct: 305 IFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRF 364 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF R++ +GVPD GR ++L +H + + L +D ++ + +A T G VGADLA + EA Sbjct: 365 GRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDL--ERIAKDTHGYVGADLAALCTEA 422 Query: 542 ALLAARRGGDIVARED 589 AL R D++ ED Sbjct: 423 ALQCIREKMDVIDLED 438 Score = 153 bits (386), Expect = 5e-37 Identities = 86/208 (41%), Positives = 120/208 (57%), Gaps = 3/208 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL GPPG GKTLLAKA+A E F SV E + M+ G A VR++F +A+++AP + Sbjct: 518 VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCV 577 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +F DELD++ RG S D D+ LNQLLTEMDG + V ++ ATNRP +D AL Sbjct: 578 LFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPAL 637 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR + +++ +PD + R +I LRK P+ ++ ++ +A T G GAD+ I Sbjct: 638 LRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDL--RALARHTQGFSGADITEIC 695 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREK 616 A A RE+I IERE+ Sbjct: 696 QRACKYA--------IRENIEKDIERER 715
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 165 bits (417), Expect = 1e-40 Identities = 87/196 (44%), Positives = 126/196 (64%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPG+GKTL+A+AVA E G FF ++ E + G + +R F+EA++ APSI Sbjct: 245 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSI 304 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDE+D++ R ++ + + ++QLLT MDG S VIVM ATNRP ++D AL R Sbjct: 305 IFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRF 364 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF R++ +GVPD GR ++L +H + + L ED ++ + V+ T G VGADLA + EA Sbjct: 365 GRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDL--ERVSKDTHGYVGADLAALCTEA 422 Query: 542 ALLAARRGGDIVARED 589 AL R D++ +D Sbjct: 423 ALQCIREKMDVIDLDD 438 Score = 153 bits (386), Expect = 5e-37 Identities = 85/208 (40%), Positives = 121/208 (58%), Gaps = 3/208 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL GPPG GKTLLAKA+A E F S+ E + M+ G A VR++F +A+++AP + Sbjct: 518 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCV 577 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +F DELD++ RG S D D+ LNQLLTEMDG ++ V ++ ATNRP +D AL Sbjct: 578 LFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPAL 637 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR + +++ +PD E R +I LRK P+ +D ++ +A T G GAD+ I Sbjct: 638 LRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDL--RALAKYTQGFSGADITEI- 694 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREK 616 +R RE+I IE+E+ Sbjct: 695 -------CQRSCKYAIRENIEKDIEKER 715
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 164 bits (415), Expect = 2e-40 Identities = 87/206 (42%), Positives = 125/206 (60%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ + Sbjct: 211 VLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACL 270 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF DE+DA+GG+R G ++E +T+ +L+ ++DGFD + V+ ATNRP LD AL Sbjct: 271 IFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPAL 330 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PDLEGR I +H R + +E D I +L+A + P GA++ ++ Sbjct: 331 MRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD--IRFELLARLCPNSTGAEIRSVC 388 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R I +D ++A+ + Sbjct: 389 TEAGMFAIRARRKIATEKDFLEAVNK 414
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 164 bits (415), Expect = 2e-40 Identities = 87/206 (42%), Positives = 125/206 (60%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ + Sbjct: 211 VLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACL 270 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF DE+DA+GG+R G ++E +T+ +L+ ++DGFD + V+ ATNRP LD AL Sbjct: 271 IFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPAL 330 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PDLEGR I +H R + +E D I +L+A + P GA++ ++ Sbjct: 331 MRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD--IRFELLARLCPNSTGAEIRSVC 388 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R I +D ++A+ + Sbjct: 389 TEAGMFAIRARRKIATEKDFLEAVNK 414
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 164 bits (415), Expect = 2e-40 Identities = 87/206 (42%), Positives = 125/206 (60%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ + Sbjct: 211 VLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACL 270 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF DE+DA+GG+R G ++E +T+ +L+ ++DGFD + V+ ATNRP LD AL Sbjct: 271 IFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPAL 330 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PDLEGR I +H R + +E D I +L+A + P GA++ ++ Sbjct: 331 MRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD--IRFELLARLCPNSTGAEIRSVC 388 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R I +D ++A+ + Sbjct: 389 TEAGMFAIRARRKIATEKDFLEAVNK 414
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 164 bits (415), Expect = 2e-40 Identities = 89/188 (47%), Positives = 116/188 (61%), Gaps = 2/188 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL GPPGTGKTLLAKA+A E F SV E + M+ G + VRD+F +A+ AAP + Sbjct: 534 VLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCV 593 Query: 182 IFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 +F+DELD++ +RG S D D+ +NQLLTEMDG +S V V+ ATNRP +D AL Sbjct: 594 VFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALM 653 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 RPGR + ++V +PD E R IL LR P+ ED ++ VA T G GADL +V Sbjct: 654 RPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDL--RAVAKATHGFSGADLEFVVQ 711 Query: 536 EAALLAAR 559 A LA + Sbjct: 712 RAVKLAIK 719 Score = 163 bits (412), Expect = 5e-40 Identities = 88/209 (42%), Positives = 135/209 (64%), Gaps = 1/209 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +L+ GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ +P+I Sbjct: 261 ILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAI 320 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDE+D++ R ++ + + ++QLLT MDG + V+VMAATNRP ++D AL R Sbjct: 321 IFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRF 380 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF R+V VG+PD GR +IL +H + + L +D ++ + +A T G VG+DLA++ +EA Sbjct: 381 GRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDL--EQIAAETHGYVGSDLASLCSEA 438 Query: 542 ALLAARRGGDIV-AREDIMDAIEREKYGV 625 A+ R D++ ED +DA + GV Sbjct: 439 AMQQIREKMDMIDLDEDEIDAEVLDSLGV 467
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 164 bits (414), Expect = 3e-40 Identities = 86/206 (41%), Positives = 125/206 (60%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTL A+AVA F V SE V+ +VG GA VR+LF+ A+ + Sbjct: 212 VLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACL 271 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF DE+DA+GG+R G ++E +T+ +L+ ++DGFD + V+ ATNRP LD AL Sbjct: 272 IFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPAL 331 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PDLEGR I +H R + +E D I +L+A + P GA++ ++ Sbjct: 332 MRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERD--IRFELLARLCPNSTGAEIRSVC 389 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R + +D ++A+ + Sbjct: 390 TEAGMFAIRARRKVATEKDFLEAVNK 415
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 164 bits (414), Expect = 3e-40 Identities = 88/189 (46%), Positives = 116/189 (61%), Gaps = 3/189 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL GPPGTGKTLLAKAVA E F SV E + M+ G + +RD+F +A+ AAP++ Sbjct: 524 VLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTV 583 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +F+DELD++ +RG S D D+ +NQLLTEMDG ++ V V+ ATNRP +D A+ Sbjct: 584 VFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAI 643 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR + ++V +PD R IL LRK PLE E+ +A T G GADL IV Sbjct: 644 LRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTA--IAKATQGFSGADLLYIV 701 Query: 533 NEAALLAAR 559 AA A + Sbjct: 702 QRAAKYAIK 710 Score = 163 bits (413), Expect = 3e-40 Identities = 87/209 (41%), Positives = 135/209 (64%), Gaps = 1/209 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+EA++ AP+I Sbjct: 251 VLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAI 310 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDE+D++ R ++ + + ++QLLT MDG + V+V+AATNRP ++D AL R Sbjct: 311 IFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRF 370 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF R+V +G+PD GR ++L +H + + L +D ++ + +A T G VGAD+A++ +EA Sbjct: 371 GRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDL--EALAAETHGYVGADIASLCSEA 428 Query: 542 ALLAARRGGDIV-AREDIMDAIEREKYGV 625 A+ R D++ ED +DA + GV Sbjct: 429 AMQQIREKMDLIDLDEDEIDAEVLDSLGV 457
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 164 bits (414), Expect = 3e-40 Identities = 86/204 (42%), Positives = 131/204 (64%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F E ++ +P+I Sbjct: 246 ILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAI 305 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 +FIDE+DA+ R ++ + + ++QLLT MDG + V+V+AATNRP ++D AL R Sbjct: 306 LFIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRF 365 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF R++ +G+PD GR +IL +H + + L ED ++ + VAN G VGADLA++ +EA Sbjct: 366 GRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDL--EQVANECHGFVGADLASLCSEA 423 Query: 542 ALLAARRGGDIVAREDIMDAIERE 613 A+ R +++ ED D I+ E Sbjct: 424 AIQQIREKMELIDLED--DTIDAE 445 Score = 155 bits (391), Expect = 1e-37 Identities = 83/199 (41%), Positives = 117/199 (58%), Gaps = 3/199 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL GPPG GKTLLAKA+A E F S+ E + M+ G A VRD+F +A+ AAP + Sbjct: 519 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCV 578 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +F DELD++ +RG S D D+ +NQ+LTEMDG ++ V ++ ATNRP +D A+ Sbjct: 579 LFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAV 638 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR + +++ +PD R +I LRK PL D ++ + +A T G GADL I Sbjct: 639 LRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDL--NFLAKNTVGFSGADLTEIC 696 Query: 533 NEAALLAARRGGDIVARED 589 A LA R + R++ Sbjct: 697 QRACKLAIRESIEREIRQE 715
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 161 bits (407), Expect = 2e-39 Identities = 91/206 (44%), Positives = 124/206 (60%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKAVA G F AS V+ ++G A +R++F AKE P I Sbjct: 218 VLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCI 277 Query: 182 IFIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF+DE+DA+GG S G S + E +TL +LLT+MDGFD+ + ++ ATNRP LD AL Sbjct: 278 IFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPAL 337 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RKV + +P+ GR +I +H KV ++ E + ++ G GAD+ N Sbjct: 338 LRPGRLDRKVEIPLPNEAGRLEIFKIHTAKV--KKTGEFDFEAAVKMSDGFNGADIRNCA 395 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA A R D + +D+M A+ + Sbjct: 396 TEAGFFAIRDDRDHINPDDLMKAVRK 421
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 159 bits (402), Expect = 7e-39 Identities = 95/206 (46%), Positives = 128/206 (62%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKT+LAKAVA + F ++ SE V F+G G+ VRDLF+ A++ P+I Sbjct: 189 VLLHGPPGTGKTMLAKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAI 248 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DAV R S + E +T+ QLL+EMDGFD + ++AATNR LDSA+ Sbjct: 249 IFIDEIDAVAAKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDSAI 308 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R + V P+ + R +IL +H ++ + DS DL A+ T GA LA++ Sbjct: 309 LRPGRFDRLIEVPNPNPDARERILEIHAGEMNV-ADSVDFSDLAAD-TAEFSGAQLASLA 366 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R D V R+D DA E+ Sbjct: 367 TEAGMFAIRDDRDEVHRQDFDDAYEK 392
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 159 bits (401), Expect = 9e-39 Identities = 84/204 (41%), Positives = 130/204 (63%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTL+A+AVA E G FF ++ E + G + +R F+E ++ P+I Sbjct: 247 ILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAI 306 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 +FIDE+DA+ R ++ + + ++QLLT MDG ++V+AATNRP ++D AL R Sbjct: 307 LFIDEIDAIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRF 366 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF R++ +G+PD GR +IL +H + + L +D ++ + +AN G VGADLA++ +EA Sbjct: 367 GRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDL--EQIANECHGFVGADLASLCSEA 424 Query: 542 ALLAARRGGDIVAREDIMDAIERE 613 AL R +++ ED D I+ E Sbjct: 425 ALQQIREKMELIDLED--DQIDAE 446 Score = 154 bits (389), Expect = 2e-37 Identities = 82/190 (43%), Positives = 112/190 (58%), Gaps = 4/190 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL GPPG GKTLLAKA+A E F S+ E + M+ G A VRD+F +A+ AAP + Sbjct: 520 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCV 579 Query: 182 IFIDELDAV----GGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 349 +F DELD++ GG G D+ +NQ+LTEMDG ++ V ++ ATNRP +D A Sbjct: 580 LFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPA 639 Query: 350 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 + RPGR + +++ +PD R +IL LRK PL +D ++ +A T G GADL I Sbjct: 640 VLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDL--TFLAKNTVGFSGADLTEI 697 Query: 530 VNEAALLAAR 559 A LA R Sbjct: 698 CQRACKLAIR 707
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 157 bits (398), Expect = 2e-38 Identities = 92/206 (44%), Positives = 124/206 (60%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLA+AVA F VS SE V+ F+G GA VR+LF A+E APSI Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI 245 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LDSAL Sbjct: 246 IFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSAL 305 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ + Sbjct: 306 LRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKGVC 363 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V +ED A+ + Sbjct: 364 TEAGMYALRERRVHVTQEDFEMAVAK 389
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 157 bits (398), Expect = 2e-38 Identities = 92/206 (44%), Positives = 124/206 (60%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLA+AVA F VS SE V+ F+G GA VR+LF A+E APSI Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI 245 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LDSAL Sbjct: 246 IFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSAL 305 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ + Sbjct: 306 LRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKGVC 363 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V +ED A+ + Sbjct: 364 TEAGMYALRERRVHVTQEDFEMAVAK 389
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 157 bits (398), Expect = 2e-38 Identities = 92/206 (44%), Positives = 124/206 (60%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLA+AVA F VS SE V+ F+G GA VR+LF A+E APSI Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI 245 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LDSAL Sbjct: 246 IFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSAL 305 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ + Sbjct: 306 LRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKGVC 363 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V +ED A+ + Sbjct: 364 TEAGMYALRERRVHVTQEDFEMAVAK 389
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 157 bits (398), Expect = 2e-38 Identities = 92/206 (44%), Positives = 124/206 (60%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLA+AVA F VS SE V+ F+G GA VR+LF A+E APSI Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI 245 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LDSAL Sbjct: 246 IFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSAL 305 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ + Sbjct: 306 LRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKGVC 363 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V +ED A+ + Sbjct: 364 TEAGMYALRERRVHVTQEDFEMAVAK 389
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 157 bits (398), Expect = 2e-38 Identities = 92/206 (44%), Positives = 124/206 (60%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLA+AVA F VS SE V+ F+G GA VR+LF A+E APSI Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI 245 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LDSAL Sbjct: 246 IFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSAL 305 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ + Sbjct: 306 LRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKGVC 363 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V +ED A+ + Sbjct: 364 TEAGMYALRERRVHVTQEDFEMAVAK 389
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 157 bits (398), Expect = 2e-38 Identities = 90/203 (44%), Positives = 124/203 (61%), Gaps = 3/203 (1%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 L+ GPPGTGKTLLA+A A + F ++A + V+M++G GA VRD F AKE AP+II Sbjct: 219 LMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTII 278 Query: 185 FIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 FIDELDA+G R +S + E +T+ +LL ++DGF SD +V V+AATNR LD AL Sbjct: 279 FIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALL 338 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 R GR RK+ +P + R +IL +H RK+ ++D I +A T GA L + Sbjct: 339 RSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDD--INWQELARSTDEFNGAQLKAVTV 396 Query: 536 EAALLAARRGGDIVAREDIMDAI 604 EA ++A R G V ED ++ I Sbjct: 397 EAGMIALRNGQSSVKHEDFVEGI 419
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 155 bits (392), Expect = 9e-38 Identities = 90/203 (44%), Positives = 128/203 (63%), Gaps = 3/203 (1%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 L+ GPPGTGKTLLA+A A ++ F ++A + V+MF+G GA VRD F AKE +P+II Sbjct: 223 LMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAII 282 Query: 185 FIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 FIDELDA+G R ++ + E +T+ +LL ++DGF SD +V V+AATNR LD AL Sbjct: 283 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALL 342 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 R GR RK+ +P+ E R IL +H RK+ +++D I + +A T GA L ++ Sbjct: 343 RSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDD--INWEELARSTDEYNGAMLKSVCV 400 Query: 536 EAALLAARRGGDIVAREDIMDAI 604 EA ++A R+G + E MD I Sbjct: 401 EAGMIALRQGDTKINHEHFMDGI 423
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 155 bits (392), Expect = 9e-38 Identities = 84/185 (45%), Positives = 114/185 (61%), Gaps = 5/185 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPG GKTLLAKA+A E F SV E + M+ G A VRDLF +A+ A+P I Sbjct: 971 ILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCI 1030 Query: 182 IFIDELDAVGGSR-GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 358 IF DE+D++ R + ND D+ +NQ+LTE+DG + + ++AATNRP LD AL R Sbjct: 1031 IFFDEIDSLAKERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTR 1090 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI--- 529 PGR + +++ +PDL+ R I L+ PL ED +I +A T G GAD+ N+ Sbjct: 1091 PGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDI--HDMAKRTEGFSGADITNLCQS 1148 Query: 530 -VNEA 541 VNEA Sbjct: 1149 AVNEA 1153 Score = 143 bits (361), Expect = 4e-34 Identities = 76/182 (41%), Positives = 114/182 (62%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ G PGTGKT +AKA+A E+ + ++ E + +G ++R +FK+A E P I Sbjct: 564 VLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCI 623 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDE+D++ R +S N+ + ++QLLT MDG + V+V+AATNRP ++D AL R Sbjct: 624 IFIDEIDSIANKRSKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRF 683 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GRF R++ + VPD +GR +IL +K+ L+ D + +A G VGADLA + EA Sbjct: 684 GRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNL--RKIAKECHGYVGADLAQLCFEA 741 Query: 542 AL 547 A+ Sbjct: 742 AI 743
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 154 bits (390), Expect = 2e-37 Identities = 88/204 (43%), Positives = 123/204 (60%), Gaps = 3/204 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKTLLA+A A + F ++ + V+MF+G GA VRD F AKE APSI Sbjct: 188 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSI 247 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDELDA+G R ++ + E +T+ +LL ++DGF +V V+AATNR LD AL Sbjct: 248 IFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPAL 307 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 R GR RK+ +P+ E R +I+ +H RK+ + D + + +A T GA + Sbjct: 308 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPD--VNYEELARCTDDFNGAQCKAVC 365 Query: 533 NEAALLAARRGGDIVAREDIMDAI 604 EA ++A RRG + ED M+ I Sbjct: 366 VEAGIIALRRGATELTHEDYMEGI 389
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 154 bits (389), Expect = 2e-37 Identities = 88/204 (43%), Positives = 124/204 (60%), Gaps = 3/204 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKTLLA+A A + F ++ + V+MF+G GA VRD F AKE APSI Sbjct: 223 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSI 282 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDELDA+G R ++ + E +T+ +LL ++DGF + +V V+AATNR LD AL Sbjct: 283 IFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPAL 342 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 R GR RK+ +P+ E R +I+ +H RK+ + D + + +A T GA + Sbjct: 343 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPD--VNYEELARCTDDFNGAQCKAVC 400 Query: 533 NEAALLAARRGGDIVAREDIMDAI 604 EA ++A RRG + ED M+ I Sbjct: 401 VEAGMIALRRGATELTHEDYMEGI 424
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 154 bits (389), Expect = 2e-37 Identities = 88/204 (43%), Positives = 124/204 (60%), Gaps = 3/204 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKTLLA+A A + F ++ + V+MF+G GA VRD F AKE APSI Sbjct: 223 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSI 282 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDELDA+G R ++ + E +T+ +LL ++DGF + +V V+AATNR LD AL Sbjct: 283 IFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPAL 342 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 R GR RK+ +P+ E R +I+ +H RK+ + D + + +A T GA + Sbjct: 343 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPD--VNYEELARCTDDFNGAQCKAVC 400 Query: 533 NEAALLAARRGGDIVAREDIMDAI 604 EA ++A RRG + ED M+ I Sbjct: 401 VEAGMIALRRGATELTHEDYMEGI 424
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 154 bits (389), Expect = 2e-37 Identities = 90/206 (43%), Positives = 123/206 (59%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLA+AVA F VS SE V+ F+G G+ VR+LF A+E APSI Sbjct: 185 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSI 244 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LD AL Sbjct: 245 IFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPAL 304 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ + Sbjct: 305 LRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKGVC 362 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V +ED A+ + Sbjct: 363 TEAGMYALRERRVHVTQEDFEMAVAK 388
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 154 bits (389), Expect = 2e-37 Identities = 90/206 (43%), Positives = 123/206 (59%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLA+AVA F VS SE V+ F+G G+ VR+LF A+E APSI Sbjct: 182 VLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSI 241 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF+DE+D++G SR G + E +T+ +LL ++DGF++ + V+ ATNR LD AL Sbjct: 242 IFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPAL 301 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ + Sbjct: 302 LRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKGVC 359 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V +ED A+ + Sbjct: 360 TEAGMYALRERRVHVTQEDFEMAVAK 385
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 154 bits (388), Expect = 3e-37 Identities = 90/205 (43%), Positives = 122/205 (59%), Gaps = 2/205 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLA+AVA F VS SE V+ F+G GA VR+LF A+E APSI Sbjct: 181 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSI 240 Query: 182 IFIDELDAVGG--SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 IF+DE+D++G G + E +T+ +LL ++DGF++ + V+ ATNR LDSAL Sbjct: 241 IFMDEIDSIGSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALL 300 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 RPGR RK+ P+ E R IL +H RK+ L I +A + PG GA++ + Sbjct: 301 RPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG--INLRKIAELMPGASGAEVKGVCT 358 Query: 536 EAALLAARRGGDIVAREDIMDAIER 610 EA + A R V +ED A+ + Sbjct: 359 EAGMYALRERRVHVTQEDFEMAVAK 383
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 153 bits (386), Expect = 5e-37 Identities = 92/209 (44%), Positives = 125/209 (59%), Gaps = 3/209 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 V+L GPPGTGKTLLAKAVA + F V SE ++ ++G G VR+LF+ A+E APSI Sbjct: 221 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 280 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +FIDE+DAVG R S + E +T+ +LL ++DGFDS V V+ ATNR + LD AL Sbjct: 281 VFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 340 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PD + +R+I +H ++ L ED + ++A L GAD+ I Sbjct: 341 IRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAK--DDLSGADIKAIC 398 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKY 619 EA L+A R V ED + E Y Sbjct: 399 TEAGLMALRERRMKVTNEDFKKSKESVLY 427
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 153 bits (386), Expect = 5e-37 Identities = 88/204 (43%), Positives = 124/204 (60%), Gaps = 3/204 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKTLLA+A A + F ++ + V+MF+G GA VRD F AKE APSI Sbjct: 226 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSI 285 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDELDA+G R ++ + E +T+ +LL ++DGF + +V V+AATNR LD AL Sbjct: 286 IFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPAL 345 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 R GR RK+ +P+ E R +I+ +H RK+ + D + + +A T GA + Sbjct: 346 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPD--VNYEELARCTDDFNGAQSKAVC 403 Query: 533 NEAALLAARRGGDIVAREDIMDAI 604 EA ++A RRG + ED M+ I Sbjct: 404 VEAGMIALRRGATELTHEDHMEGI 427
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 153 bits (386), Expect = 5e-37 Identities = 91/206 (44%), Positives = 124/206 (60%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTL+AKAVA + F ++ SE V F+G GA VRDLF+ A++ P++ Sbjct: 186 VLLHGPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPAV 245 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +FIDE+DA+ R S + E +T+ QLL+EMDGFD + ++AATNR LD A+ Sbjct: 246 VFIDEIDAIASKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAI 305 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF R + V P++ GR KI +H R + + DS +L A+ T L GAD+ I Sbjct: 306 LRPGRFDRLIEVPHPNVGGREKIFRIHTRAMNV-ADSVDFGELAAD-TGDLSGADVKAIC 363 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V +D A E+ Sbjct: 364 TEAGMFAIRDDRTEVRMQDFQSAREK 389
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 152 bits (384), Expect = 8e-37 Identities = 88/190 (46%), Positives = 119/190 (62%), Gaps = 3/190 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTLLAKAVA E + F SV E + M+VG+ VR++F A+ AAP I Sbjct: 741 LLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCI 800 Query: 182 IFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 IF DELD++ SRGRS + D+ ++QLL E+DG S V V+ ATNRP LD AL Sbjct: 801 IFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALL 860 Query: 356 RPGRFSRKVFVGV-PDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF + VFVG D + ++L+ RK LE S + +++ P L GADL ++ Sbjct: 861 RPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEA-SVSLANVLDCCPPQLTGADLYSLC 919 Query: 533 NEAALLAARR 562 ++A + A +R Sbjct: 920 SDAMMTALKR 929 Score = 52.8 bits (125), Expect = 9e-07 Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 1/188 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPG+GKT A G+ V S +++ F A+ P++ Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAV 526 Query: 182 IFIDELDAVGGSRGRSFNDER-DQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 358 + + +D +G R D R TL LL + D ++V+A T+R + L + + Sbjct: 527 LLLTAVDLLGRDRDGLGEDARVAATLRHLLLDEDALSRCPPLMVVATTSRVQDLPTDV-- 584 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 538 F ++ V V R IL +PL + E+ +A G V DL ++ Sbjct: 585 QTAFPHELEVPVLSEAQRLSILQALTAHLPLGQ--EVNLPQLARRCAGFVVGDLYALLTH 642 Query: 539 AALLAARR 562 A R Sbjct: 643 TCRAACTR 650
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 152 bits (383), Expect = 1e-36 Identities = 90/204 (44%), Positives = 121/204 (59%), Gaps = 3/204 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTL+A+A A + F ++ + V+MF+G GA VRD F+ AKE AP I Sbjct: 208 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCI 267 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+G R S + E +T+ +LL ++DGF SD ++ V+AATNR LD AL Sbjct: 268 IFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPAL 327 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 R GR RK+ P E R +IL +H RK+ + D + + +A T GA L + Sbjct: 328 MRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPD--VNFEELARSTDDFNGAQLKAVC 385 Query: 533 NEAALLAARRGGDIVAREDIMDAI 604 EA +LA RR V ED + I Sbjct: 386 VEAGMLALRRDATEVNHEDFNEGI 409
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 152 bits (383), Expect = 1e-36 Identities = 89/204 (43%), Positives = 121/204 (59%), Gaps = 3/204 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTL+A+A A + F ++ + V+MF+G GA VRD F+ AKE +P I Sbjct: 213 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCI 272 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+G R S + E +T+ +LL ++DGF SD ++ V+AATNR LD AL Sbjct: 273 IFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPAL 332 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 R GR RK+ P E R +IL +H RK+ + D + + +A T GA L + Sbjct: 333 MRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPD--VNFEELARSTDDFNGAQLKAVC 390 Query: 533 NEAALLAARRGGDIVAREDIMDAI 604 EA +LA RR V ED + I Sbjct: 391 VEAGMLALRRDATEVTHEDFNEGI 414
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 152 bits (383), Expect = 1e-36 Identities = 88/190 (46%), Positives = 119/190 (62%), Gaps = 3/190 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTLLAKAVA E + F SV E + M+VG+ VR++F A+ AAP I Sbjct: 738 LLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCI 797 Query: 182 IFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 IF DELD++ SRGRS + D+ ++QLL E+DG S V V+ ATNRP LD AL Sbjct: 798 IFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALL 857 Query: 356 RPGRFSRKVFVGV-PDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF + VFVG D + ++L+ RK LE S + +++ P L GADL ++ Sbjct: 858 RPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEA-SVSLMNVLDCCPPQLTGADLYSLC 916 Query: 533 NEAALLAARR 562 ++A + A +R Sbjct: 917 SDAMMTALKR 926 Score = 53.9 bits (128), Expect = 4e-07 Identities = 49/188 (26%), Positives = 77/188 (40%), Gaps = 1/188 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPG+GKT A G+ V S +++ F A+ P + Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVV 525 Query: 182 IFIDELDAVGGSRGRSFNDER-DQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 358 + + LD +G R D R TL LL + D ++V+A T+R + L + + Sbjct: 526 LLLTALDLLGRDRDGLGEDARVVATLRHLLLDEDPLSRCPPLMVVATTSRVQDLPTDV-- 583 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 538 F ++ V V R +L +PL + E+ +A G V DL ++ Sbjct: 584 RTAFPHELEVPVLSESQRLSVLQALTAHLPLGQ--EVNLSQLARRCAGFVVGDLYALLTH 641 Query: 539 AALLAARR 562 A+ A R Sbjct: 642 ASRAACTR 649
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 151 bits (382), Expect = 1e-36 Identities = 87/190 (45%), Positives = 118/190 (62%), Gaps = 3/190 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTLLAKAVA E + F SV E + M+VG+ VR++F A+ AAP I Sbjct: 740 LLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCI 799 Query: 182 IFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALC 355 IF DELD++ SRGRS + D+ ++QLL E+DG S V V+ ATNRP LD AL Sbjct: 800 IFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALL 859 Query: 356 RPGRFSRKVFVGV-PDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGRF + VFVG D + ++L+ RK LE ++ +++ P L GADL ++ Sbjct: 860 RPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLV-NVLDCCPPQLTGADLYSLC 918 Query: 533 NEAALLAARR 562 ++A A +R Sbjct: 919 SDAMTAALKR 928 Score = 55.1 bits (131), Expect = 2e-07 Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 1/188 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPG GKT + A G+ V S G +++ +F A+ P++ Sbjct: 466 VLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAV 525 Query: 182 IFIDELDAVGGSRGRSFNDERDQ-TLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 358 + + +D +G R D R L LL D +S ++V+A T+R + L + + Sbjct: 526 LLLTAVDLLGRDRDGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSRAQDLPADV-- 583 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 538 F ++ V R IL +PL + E+ +A G V DL ++ Sbjct: 584 QTAFPHELEVPALSEGQRLSILRALTAHLPLGQ--EVNLAQLARRCAGFVVGDLYALLTH 641 Query: 539 AALLAARR 562 ++ A R Sbjct: 642 SSRAACTR 649
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 151 bits (382), Expect = 1e-36 Identities = 89/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 V+L GPPGTGKTLLAKAVA + F V SE ++ ++G G VR+LF+ A+E APSI Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 281 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +FIDE+DA+G R S + E +T+ +LL ++DGFDS V V+ ATNR + LD AL Sbjct: 282 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PD + +++I +H ++ L +D + D + L GAD+ I Sbjct: 342 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADD--VTLDDLIMAKDDLSGADIKAIC 399 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKY 619 EA L+A R V ED + E Y Sbjct: 400 TEAGLMALRERRMKVTNEDFKKSKENVLY 428
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 151 bits (382), Expect = 1e-36 Identities = 89/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 V+L GPPGTGKTLLAKAVA + F V SE ++ ++G G VR+LF+ A+E APSI Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 281 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +FIDE+DA+G R S + E +T+ +LL ++DGFDS V V+ ATNR + LD AL Sbjct: 282 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PD + +++I +H ++ L +D + D + L GAD+ I Sbjct: 342 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADD--VTLDDLIMAKDDLSGADIKAIC 399 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKY 619 EA L+A R V ED + E Y Sbjct: 400 TEAGLMALRERRMKVTNEDFKKSKENVLY 428
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 151 bits (382), Expect = 1e-36 Identities = 89/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 V+L GPPGTGKTLLAKAVA + F V SE ++ ++G G VR+LF+ A+E APSI Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 281 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +FIDE+DA+G R S + E +T+ +LL ++DGFDS V V+ ATNR + LD AL Sbjct: 282 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PD + +++I +H ++ L +D + D + L GAD+ I Sbjct: 342 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADD--VTLDDLIMAKDDLSGADIKAIC 399 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKY 619 EA L+A R V ED + E Y Sbjct: 400 TEAGLMALRERRMKVTNEDFKKSKENVLY 428
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 151 bits (381), Expect = 2e-36 Identities = 89/204 (43%), Positives = 121/204 (59%), Gaps = 3/204 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTL+A+A A + F ++ + V+MF+G GA VRD F+ AKE +P I Sbjct: 207 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCI 266 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+G R S + E +T+ +LL ++DGF SD ++ V+AATNR LD AL Sbjct: 267 IFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 326 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 R GR RK+ P E R +IL +H RK+ + D + + +A T GA L + Sbjct: 327 MRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPD--VNFEELARSTDDFNGAQLKAVC 384 Query: 533 NEAALLAARRGGDIVAREDIMDAI 604 EA +LA RR V ED + I Sbjct: 385 VEAGMLALRRDATEVTHEDFNEGI 408
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 151 bits (381), Expect = 2e-36 Identities = 87/207 (42%), Positives = 122/207 (58%), Gaps = 4/207 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTLLA+AVA F VS SE V+ ++G G+ VR+LF A+E APSI Sbjct: 182 ILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 241 Query: 182 IFIDELDAVGGSR----GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 349 IF+DE+D++G SR G S + E +T+ +LL ++DGF++ + V+ ATNR LD A Sbjct: 242 IFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPA 301 Query: 350 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 L RPGR RK+ P E R +IL +H R + L ++ +A G GA+L + Sbjct: 302 LLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDL--KSIAEKMNGASGAELKGV 359 Query: 530 VNEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V +ED A+ + Sbjct: 360 CTEAGMFALRERRVHVTQEDFELAVAK 386
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 151 bits (381), Expect = 2e-36 Identities = 89/206 (43%), Positives = 119/206 (57%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 V+L G PGTGKTLLAKAVA + F + SE ++ ++G G R +FK A E APSI Sbjct: 219 VILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSI 278 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +FIDE+DA+G R S + E +T+ +LL ++DGFD V V+ ATN+ + LD AL Sbjct: 279 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPAL 338 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ PDL ++KIL +H K+ L ED + + + L GAD+ + Sbjct: 339 IRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNL--ETLVTTKDDLSGADIQAMC 396 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA LLA R V ED A ER Sbjct: 397 TEAGLLALRERRMQVTAEDFKQAKER 422
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 150 bits (380), Expect = 2e-36 Identities = 92/208 (44%), Positives = 125/208 (60%), Gaps = 6/208 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LLAGPPG GKTLLAKAVA E+G+ F SV E + M+VG VR +F+ AK +AP + Sbjct: 617 ILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCV 676 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IF DE+DA+ R + +NQLLTEMDG ++ +V ++AATNRP +D A+ RP Sbjct: 677 IFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRP 736 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLR---KVPLEED---SEIICDLVANVTPGLVGADLA 523 GR + +FVG+P R IL + K PL+ED I DL N GADL Sbjct: 737 GRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNC---YTGADLT 793 Query: 524 NIVNEAALLAARRGGDIVAREDIMDAIE 607 +V EA+L A R+ +I A+++ + A E Sbjct: 794 ALVREASLCALRQ--EITAQKNGVGAGE 819 Score = 147 bits (370), Expect = 3e-35 Identities = 87/190 (45%), Positives = 115/190 (60%), Gaps = 3/190 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPG GKTLLA A+AGE +P V+A E V G ++R+LF +A AP I Sbjct: 300 VLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCI 359 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFD---SDVKVIVMAATNRPKALDSAL 352 +FIDE+DA+ R + D + + QLLT MD + + +V+V+ ATNRP +LD AL Sbjct: 360 VFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPAL 419 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 R GRF R+V +G+PD R +IL RK+ L E C L A++TPG VGADL + Sbjct: 420 RRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFN-FCHL-AHLTPGFVGADLMALC 477 Query: 533 NEAALLAARR 562 EAA+ A R Sbjct: 478 REAAMCAVNR 487
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 150 bits (378), Expect = 4e-36 Identities = 88/209 (42%), Positives = 123/209 (58%), Gaps = 3/209 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 V+L GPPGTGKTLLAKAVA + F V SE ++ ++G G VR+LF+ A+E PSI Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSI 281 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +FIDE+DA+G R S + E +T+ +LL ++DGFDS V V+ ATNR + LD AL Sbjct: 282 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PD + +++I +H ++ L +D + D + L GAD+ I Sbjct: 342 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADD--VTLDELIMAKDDLSGADIKAIC 399 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKY 619 EA L+A R V ED + E Y Sbjct: 400 TEAGLMALRERRMKVTNEDFKKSKENFLY 428
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 149 bits (376), Expect = 7e-36 Identities = 89/207 (42%), Positives = 122/207 (58%), Gaps = 4/207 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLA+AVA F VS SE V+ ++G G+ VR+LF A+E APSI Sbjct: 168 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSI 227 Query: 182 IFIDELDAVGGSRGRS----FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 349 IF+DE+D++G SRG S + E +T+ +LL ++DGF+S + V+ TNR LD A Sbjct: 228 IFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPA 287 Query: 350 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 L RPGR RK+ P GR IL +H RK+ L I +++ G GA+L + Sbjct: 288 LLRPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRG--INLKKISDKMNGASGAELKAV 345 Query: 530 VNEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V++ED A+ + Sbjct: 346 CTEAGMYALRERRVHVSQEDFEMAVSK 372
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 149 bits (375), Expect = 9e-36 Identities = 89/204 (43%), Positives = 120/204 (58%), Gaps = 3/204 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTL+A+A A + F ++ + V+MF+G GA VRD F AKE +P I Sbjct: 203 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCI 262 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+G R S + E +T+ +LL ++DGF SD ++ V+AATNR LD AL Sbjct: 263 IFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPAL 322 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 R GR RK+ P E R +IL +H RK+ + D + + +A T GA L + Sbjct: 323 MRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNAD--VNFEELARSTDDFNGAQLKAVC 380 Query: 533 NEAALLAARRGGDIVAREDIMDAI 604 EA +LA RR V ED + I Sbjct: 381 VEAGMLALRRDATEVNHEDFNEGI 404
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 148 bits (373), Expect = 2e-35 Identities = 86/197 (43%), Positives = 116/197 (58%), Gaps = 10/197 (5%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLLAGPPG GKTLLAKAVA E+G+ F SV E + M+VG VR +F+ AK +AP + Sbjct: 618 VLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCV 677 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IF DE+DA+ R + +NQLLTEMDG ++ +V +MAATNRP +D A+ RP Sbjct: 678 IFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRP 737 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLR---KVPLEED-------SEIICDLVANVTPGLVG 511 GR + +FVG+P R IL + K PL+ D ++ CD G Sbjct: 738 GRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDC-------YTG 790 Query: 512 ADLANIVNEAALLAARR 562 ADL+ +V EA++ A R+ Sbjct: 791 ADLSALVREASICALRQ 807 Score = 147 bits (370), Expect = 3e-35 Identities = 86/190 (45%), Positives = 117/190 (61%), Gaps = 3/190 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPG GKTLLA A+AGE +P V+A E V G ++R+LF++A AP I Sbjct: 301 VLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCI 360 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFD---SDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+ R + D + + QLLT MD + + +V+V+ ATNRP +LD AL Sbjct: 361 IFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPAL 420 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 R GRF R++ +G+PD R +IL RK+ L + + C L A++TPG VGADL + Sbjct: 421 RRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFD-FCHL-AHLTPGFVGADLMALC 478 Query: 533 NEAALLAARR 562 EAA+ A R Sbjct: 479 REAAMCAVNR 488
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 147 bits (371), Expect = 3e-35 Identities = 88/206 (42%), Positives = 120/206 (58%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 V+L G PGTGKTLLAKAVA F V SE ++ ++G G VR+LF+ A E +PSI Sbjct: 230 VILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSI 289 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +FIDE+DAVG R + + E +T+ +LL ++DGFDS V V+ ATNR ++LD AL Sbjct: 290 VFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPAL 349 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PD++ RR+I +H K+ L +D + + GAD+ I Sbjct: 350 LRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNL--EEFVMTKDEFSGADIKAIC 407 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA LLA R V D A E+ Sbjct: 408 TEAGLLALRERRMKVTHADFKKAKEK 433
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 147 bits (370), Expect = 3e-35 Identities = 83/190 (43%), Positives = 115/190 (60%), Gaps = 4/190 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPG KT LAKA A A FFS+S +E M+VG G A +R+ F+ A+ A+PSI Sbjct: 323 ILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSI 382 Query: 182 IFIDELDAVGGSRGRSFNDER----DQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 349 IF DE D V RG + ++ L+ LLTEMDG + ++V+AATNRP A+D+A Sbjct: 383 IFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAA 442 Query: 350 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 L RPGRF ++V PDLE R +IL VH R + L +D ++ +A T GA+L + Sbjct: 443 LMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDL--RKIAEETDLFTGAELEGL 500 Query: 530 VNEAALLAAR 559 E+ ++ R Sbjct: 501 CRESGTVSLR 510 Score = 104 bits (259), Expect = 3e-22 Identities = 74/197 (37%), Positives = 101/197 (51%), Gaps = 7/197 (3%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAA--- 172 +LL GPPGTGKT L +AV E +S G +R+ F EA A Sbjct: 59 LLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSD 118 Query: 173 -PSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDG---FDSDVKVIVMAATNRPKAL 340 PS+IFIDE+D + R ++ + +QL T MD S +V+V+A+TNR A+ Sbjct: 119 KPSVIFIDEIDVLCPRRDAR-REQDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAI 177 Query: 341 DSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADL 520 D AL R GRF V V P+ E R KIL ++ +KV L D + +A G VGADL Sbjct: 178 DPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNL--DPSVDLQAIAISCNGYVGADL 235 Query: 521 ANIVNEAALLAARRGGD 571 + EA + A++R D Sbjct: 236 EALCREATISASKRSSD 252
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 146 bits (368), Expect = 6e-35 Identities = 88/209 (42%), Positives = 122/209 (58%), Gaps = 3/209 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 V+L G PGTGKTLLAKAVA + F + SE ++ ++G G VR+LF+ A+E APSI Sbjct: 225 VILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSI 284 Query: 182 IFIDELDAVGGSRGRSFND---ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +FIDE+DAVG R S + E +T+ +LL ++DGFDS V V+ ATNR ++LD AL Sbjct: 285 VFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPAL 344 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PD + +R+I +H ++ L E+ + L GAD+ + Sbjct: 345 IRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTL--GKEVNLEEFITAKDELSGADIKAMC 402 Query: 533 NEAALLAARRGGDIVAREDIMDAIEREKY 619 EA LLA R V ED + E Y Sbjct: 403 TEAGLLALRERRMRVTMEDFQKSKENVLY 431
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 145 bits (365), Expect = 1e-34 Identities = 81/195 (41%), Positives = 113/195 (57%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPG KTL AKA+A E+GI F +V E +VG +R++F++A+ AAPSI Sbjct: 553 VLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSI 612 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IF DE+DA+ R S + L LL E+DG + V+++AATNRP +D+AL RP Sbjct: 613 IFFDEIDALSPDRDGSSTSAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRP 672 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GR R ++VG PD+ R +IL +K EE + +L A+ T G GA++ + EA Sbjct: 673 GRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHEL-ADRTEGYSGAEVVLLCQEA 731 Query: 542 ALLAARRGGDIVARE 586 L A D+ E Sbjct: 732 GLAAIMEDLDVAKVE 746 Score = 140 bits (352), Expect = 4e-33 Identities = 77/192 (40%), Positives = 117/192 (60%), Gaps = 4/192 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKT+L + VA + +++ V ++G A +RD+F EA++ PSI Sbjct: 282 ILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSI 341 Query: 182 IFIDELDAVGGSRGRSFNDE-RDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 358 IFIDE+D++ +R + E + + LLT MDG + KV+V+AATNRP ++D AL R Sbjct: 342 IFIDEIDSIAPNRANDDSGEVESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRR 401 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE---DSEIICDLVANVTPGLVGADLANI 529 PGRF ++V +G+PD++ R IL ++ + DSE I +A+ T G VGADL + Sbjct: 402 PGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAI-KYIASKTHGYVGADLTAL 460 Query: 530 VNEAALLAARRG 565 E+ + +RG Sbjct: 461 CRESVMKTIQRG 472
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 144 bits (364), Expect = 2e-34 Identities = 86/204 (42%), Positives = 120/204 (58%), Gaps = 3/204 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 V+L GPPGTGKTLLA+AVA F VS +E V+ ++G G+ VR+LF A+E APSI Sbjct: 185 VILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSI 244 Query: 182 IFIDELDAVGGSR--GRSFND-ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IF+DE+D++G +R G D E +T+ +LL ++DGF++ + ++ ATNR LD AL Sbjct: 245 IFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPAL 304 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ P + R +IL +H RK+ L I VA G GAD+ + Sbjct: 305 LRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRG--INLRKVAEKMNGCSGADVKGVC 362 Query: 533 NEAALLAARRGGDIVAREDIMDAI 604 EA + A R V +ED A+ Sbjct: 363 TEAGMYALRERRIHVTQEDFELAV 386
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 144 bits (364), Expect = 2e-34 Identities = 89/203 (43%), Positives = 119/203 (58%), Gaps = 3/203 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPG GKT+LAKAVA F V SEFV+ ++G G VRD+F+ AKE AP+I Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 261 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+ R + E + L +LL +MDGFD +V V V+ ATNR LD AL Sbjct: 262 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPAL 321 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PD +R I + K+ L E+ ++ D VA + GAD+ +I Sbjct: 322 LRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE-DYVAR-PDKISGADINSIC 379 Query: 533 NEAALLAARRGGDIVAREDIMDA 601 E+ +LA R IV +D A Sbjct: 380 QESGMLAVRENRYIVLAKDFEKA 402
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 144 bits (364), Expect = 2e-34 Identities = 89/203 (43%), Positives = 119/203 (58%), Gaps = 3/203 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPG GKT+LAKAVA F V SEFV+ ++G G VRD+F+ AKE AP+I Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 261 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+ R + E + L +LL +MDGFD +V V V+ ATNR LD AL Sbjct: 262 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPAL 321 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PD +R I + K+ L E+ ++ D VA + GAD+ +I Sbjct: 322 LRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE-DYVAR-PDKISGADINSIC 379 Query: 533 NEAALLAARRGGDIVAREDIMDA 601 E+ +LA R IV +D A Sbjct: 380 QESGMLAVRENRYIVLAKDFEKA 402
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 144 bits (364), Expect = 2e-34 Identities = 90/209 (43%), Positives = 121/209 (57%), Gaps = 6/209 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 V+L G PGTGKTLLAKAVA + F V SE ++ ++G G VR LF A+E +PSI Sbjct: 228 VILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSI 287 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDS---DVKVIVMAATNRPKALD 343 +FIDE+DA+G R E +T+ +LL ++DGFD+ D+KVI+ ATNR LD Sbjct: 288 VFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIM--ATNRISDLD 345 Query: 344 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 523 AL RPGR RK+ PD +RKI +H K+ L ED + + + L GA++ Sbjct: 346 PALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNL--EELIQCKDDLSGAEIK 403 Query: 524 NIVNEAALLAARRGGDIVAREDIMDAIER 610 IV+EA LLA R V +D A E+ Sbjct: 404 AIVSEAGLLALRERRMRVVMDDFRQAREK 432
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 144 bits (362), Expect = 3e-34 Identities = 88/204 (43%), Positives = 122/204 (59%), Gaps = 4/204 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKT+L KAVA F V+ SEFV ++G G VRD+F+ A+E APSI Sbjct: 209 VLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSI 268 Query: 182 IFIDELDAVGGSR--GRSFND-ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+D++ R ++ +D E + L +LLT+MDGFD V V+ ATNR LD AL Sbjct: 269 IFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPAL 328 Query: 353 CRPGRFSRKV-FVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 RPGR RK+ F + D RR I K+ L ++++ ++ N L GA +A I Sbjct: 329 LRPGRLDRKIEFPYLRDRRERRLIFGTIASKMSLAPEADLDSLIIRN--DSLSGAVIAAI 386 Query: 530 VNEAALLAARRGGDIVAREDIMDA 601 + EA L A R+ ++ + D+ +A Sbjct: 387 MQEAGLRAVRKNRYVILQSDLEEA 410
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 142 bits (359), Expect = 6e-34 Identities = 88/207 (42%), Positives = 115/207 (55%), Gaps = 4/207 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKT+L KAVA F V SEFV+ ++G G VRD+F+ A+E AP+I Sbjct: 171 VLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAI 230 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+ R + E + L +LLT+MDGFD V V+ ATNR LD AL Sbjct: 231 IFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPAL 290 Query: 353 CRPGRFSRKV-FVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 RPGR RK+ F D RR + K+ L E+ D GA +A I Sbjct: 291 LRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLL--SPEVDLDTFIMRPDASSGAQIAAI 348 Query: 530 VNEAALLAARRGGDIVAREDIMDAIER 610 + +A LLA R+ ++ + DI +A R Sbjct: 349 MQDAGLLAVRKSRGVILQSDIEEAYAR 375
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 142 bits (357), Expect = 1e-33 Identities = 85/203 (41%), Positives = 117/203 (57%), Gaps = 3/203 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPG GKT+LAKAVA F V SEFV+ ++G G VRD+F+ AKE +PSI Sbjct: 198 VLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSI 257 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+ R + E + L +LL +MDGFD V V+ ATNR LD AL Sbjct: 258 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPAL 317 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PD +R + + ++ L +D ++ D VA + GAD+ +I Sbjct: 318 LRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLE-DWVAR-PDKISGADINSIC 375 Query: 533 NEAALLAARRGGDIVAREDIMDA 601 EA + A R +V +D+ A Sbjct: 376 QEAGMQAVRENRYVVLTKDLEKA 398
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 142 bits (357), Expect = 1e-33 Identities = 88/217 (40%), Positives = 125/217 (57%), Gaps = 10/217 (4%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +L GPPG GKT LA A+A EAG+PF+ +SA+E + G +R+LF +A APSI Sbjct: 270 ILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSI 329 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDG----------FDSDVKVIVMAATNRP 331 +FIDE+DA+G R + + + QLLT MDG S V+V+ ATNRP Sbjct: 330 VFIDEIDAIGSKRENQQREMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRP 389 Query: 332 KALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVG 511 ALD AL R GRF ++ + PD + R +IL+V +K+ LE + +A +TPG VG Sbjct: 390 DALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFD--KKRIARLTPGFVG 447 Query: 512 ADLANIVNEAALLAARRGGDIVAREDIMDAIEREKYG 622 ADL ++ A LA R+ A + I+D+ + E+ G Sbjct: 448 ADLESV----AYLAGRK-----AIKRILDSRKSEQSG 475 Score = 136 bits (342), Expect = 6e-32 Identities = 78/200 (39%), Positives = 112/200 (56%), Gaps = 2/200 (1%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 LL GPPG GKTL+AKA A EAG F + +E + +VG +R LF+ A+ AP +I Sbjct: 566 LLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVI 625 Query: 185 FIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRPG 364 F DE+DA+ SRG+ ++ LNQ L E+DG + V V+ ATNRP +D A RPG Sbjct: 626 FFDEVDALTTSRGKEGAWVVERLLNQFLVELDGGERR-NVYVIGATNRPDVVDPAFLRPG 684 Query: 365 RFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAA 544 RF ++V +P+ + R IL RK P++ + + + N G GADLA++V +A Sbjct: 685 RFGNLLYVPLPNADERASILKAIARKKPIDPSVD-LDGIAKNNCEGFSGADLAHLVQKAT 743 Query: 545 LLAARR--GGDIVAREDIMD 598 A G + +D+ D Sbjct: 744 FQAVEEMIGSSESSEDDVTD 763
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 141 bits (356), Expect = 1e-33 Identities = 84/207 (40%), Positives = 123/207 (59%), Gaps = 4/207 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 V++ GPPGTGKTLLA+AVA F VS SE V+ ++G G+ VR+LF A+E APSI Sbjct: 193 VIMYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSI 252 Query: 182 IFIDELDAVGGSR---GRSFND-ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 349 IF+DE+D++G +R G+ D E +T+ +LL ++DGF+S + ++ ATNR LD A Sbjct: 253 IFMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPA 312 Query: 350 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 L RPGR RK+ P+ R IL +H R++ L I +A++ G GA++ Sbjct: 313 LLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRG--INLRKIASMLGGASGAEIKAT 370 Query: 530 VNEAALLAARRGGDIVAREDIMDAIER 610 EA + A R V +ED+ A+ + Sbjct: 371 CTEAGMFALRERRVHVTQEDLEMAVAK 397
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 141 bits (356), Expect = 1e-33 Identities = 88/203 (43%), Positives = 117/203 (57%), Gaps = 3/203 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPG GKT+LAKAVA F V SEFV+ ++G G VRD+F+ AKE AP+I Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 261 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+ R + E + L +LL +MDGFD +V V V+ ATNR LD AL Sbjct: 262 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPAL 321 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PD +R I + K+ L E+ ++ D VA + GAD+ +I Sbjct: 322 LRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE-DYVAR-PDKISGADINSIC 379 Query: 533 NEAALLAARRGGDIVAREDIMDA 601 +LA R IV +D A Sbjct: 380 QARGMLAVRETAYIVLAKDFEKA 402
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 141 bits (355), Expect = 2e-33 Identities = 85/199 (42%), Positives = 118/199 (59%), Gaps = 3/199 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKT+LAKAVA F V SEFV+ ++G G VRD+F+ AKE AP+I Sbjct: 192 VLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 251 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+ +R + E + L +LL +MDGFD V V V+ ATNR LD AL Sbjct: 252 IFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPAL 311 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PD +R + V K+ L ++ ++ D V+ + A++A I Sbjct: 312 LRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLE-DYVSR-PDKISAAEIAAIC 369 Query: 533 NEAALLAARRGGDIVARED 589 EA + A R+ ++ +D Sbjct: 370 QEAGMHAVRKNRYVILPKD 388
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 140 bits (353), Expect = 3e-33 Identities = 88/205 (42%), Positives = 120/205 (58%), Gaps = 5/205 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKT+L KAVA F V+ SEFV+ ++G G VRD+F+ A+E +P+I Sbjct: 203 VLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAI 262 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+ R + E + L +LL +MDGF+ V V+ ATNR LD AL Sbjct: 263 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFEQSSNVKVIMATNRADTLDPAL 322 Query: 353 CRPGRFSRKV-FVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 RPGR RK+ F + D RR I + K+ L + ++ +V N L GA +A I Sbjct: 323 LRPGRLDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDSLIVRN--EPLSGAVIAAI 380 Query: 530 VNEAALLAARRGG-DIVAREDIMDA 601 + EA L A R+ +I+ R D+ DA Sbjct: 381 MQEAGLRAVRKNRYNIIPRSDLEDA 405
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 140 bits (353), Expect = 3e-33 Identities = 86/206 (41%), Positives = 117/206 (56%), Gaps = 3/206 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKT+L KAVA F V+ SEFV+ ++G G VRD+F+ A+E APSI Sbjct: 171 VLLYGPPGTGKTMLVKAVANHTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPSI 230 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 +FIDE+D++ R S + E + L +LL +MDGFD V V+ ATNR +D AL Sbjct: 231 VFIDEVDSIATKRFDASTSADREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPAL 290 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PD +R + K+ L DS I LV + AD+ +I Sbjct: 291 LRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSL-NDSVDIESLVCR-PEKISCADINSIC 348 Query: 533 NEAALLAARRGGDIVAREDIMDAIER 610 EA +LA R +V + D +A + Sbjct: 349 QEAGMLAVRASRYMVTQRDFEEAYSK 374
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 140 bits (353), Expect = 3e-33 Identities = 85/199 (42%), Positives = 118/199 (59%), Gaps = 3/199 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKT+LAKAVA F V SEFV+ ++G G VRD+F+ A+E +P+I Sbjct: 187 VLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAI 246 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+ R + E + L +LL +MDGFD V V V+ ATNR LD AL Sbjct: 247 IFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPAL 306 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PD +R I V K+ L ++ ++ D V+ L GA++ +I Sbjct: 307 LRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLE-DYVSR-PDKLSGAEIQSIC 364 Query: 533 NEAALLAARRGGDIVARED 589 EA + A R+ ++ +D Sbjct: 365 QEAGMHAIRKNRYVILPKD 383
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 140 bits (352), Expect = 4e-33 Identities = 80/199 (40%), Positives = 119/199 (59%), Gaps = 4/199 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +L GPPGTGKTL+AKA+A + FFSV E + M++G A VR +F++A+EA P + Sbjct: 768 ILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCV 827 Query: 182 IFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSAL 352 IF DE+D+V RG + D+ ++QLL E+DG +D V V+ ATNRP LD AL Sbjct: 828 IFFDEIDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSTDADGVFVIGATNRPDLLDEAL 887 Query: 353 CRPGRFSRKVFVGVPDLEGRR-KILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 RPGRF + +++G+PD + ++ IL RK L+ D ++I +L GAD + Sbjct: 888 LRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLI-ELAKLCPFNYTGADFYAL 946 Query: 530 VNEAALLAARRGGDIVARE 586 ++A L A R +V ++ Sbjct: 947 CSDAMLNAMSRIARMVEKK 965
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 139 bits (351), Expect = 5e-33 Identities = 81/191 (42%), Positives = 116/191 (60%), Gaps = 3/191 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKTLLA+A A + F ++ + V+MF+G GA VRD F AKE APSI Sbjct: 207 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSI 266 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDELDA+G R ++ + E +T+ +LL ++DGF +++V V+AATNR LD AL Sbjct: 267 IFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPAL 326 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 R GR RK+ +P+ E R +I+ +H RK+ + D + + +A + Sbjct: 327 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPD--VNYEELARCPTISMALSAKQFG 384 Query: 533 NEAALLAARRG 565 EA ++A RRG Sbjct: 385 VEAGMIALRRG 395
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 139 bits (349), Expect = 9e-33 Identities = 76/191 (39%), Positives = 117/191 (61%), Gaps = 4/191 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKTLLAKAVA E + F S+ E + M+VG A VR++F++A+ ++P + Sbjct: 691 VLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCV 750 Query: 182 IFIDELDAVGGSRGRSFN--DERDQTLNQLLTEMDGF--DSDVKVIVMAATNRPKALDSA 349 IF DELD++ RG S + + D+ ++QLL E+D D++ V V+ ATNRP LD + Sbjct: 751 IFFDELDSIAPHRGNSSDSGNVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPS 810 Query: 350 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 L RPGRF + V++G+ E + + L K +++ + ++ N P GAD+ + Sbjct: 811 LLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYAL 870 Query: 530 VNEAALLAARR 562 ++A L A +R Sbjct: 871 CSDAVLSAIKR 881 Score = 38.9 bits (89), Expect = 0.013 Identities = 25/92 (27%), Positives = 45/92 (48%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 LL G P TGKT + VA P F++S+ EF + A++ + ++ +II Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADATADHLEAKLDMFVQNVVKSPCAII 485 Query: 185 FIDELDAVGGSRGRSFNDERDQTLNQLLTEMD 280 F+ +LD + S +++ LL+++D Sbjct: 486 FVKDLDVLSISSDEGNIVPGSKSIQILLSKID 517
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 138 bits (347), Expect = 2e-32 Identities = 84/199 (42%), Positives = 117/199 (58%), Gaps = 3/199 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPGTGKT+LAKAVA F V SEFV+ ++G G VRD+F+ AKE AP+I Sbjct: 197 VLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 256 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+ +R + E + L +LL +MDGFD V V V+ ATNR LD AL Sbjct: 257 IFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPAL 316 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PD +R + V K+ L ++ ++ D V+ + A++ I Sbjct: 317 LRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLE-DYVSR-PDKISAAEITAIC 374 Query: 533 NEAALLAARRGGDIVARED 589 EA + A R+ ++ +D Sbjct: 375 QEAGMHAVRKNRYVILPKD 393
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 138 bits (347), Expect = 2e-32 Identities = 77/195 (39%), Positives = 122/195 (62%), Gaps = 8/195 (4%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKT+LAKAVA E G FF+VS++ + G VR LF+ A+ APS Sbjct: 270 VLMVGPPGTGKTMLAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAPST 329 Query: 182 IFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGF-------DSDVKVIVMAATNRPKA 337 IFIDE+D++ RG E + + ++LL +MDG +S V+V+AATN P Sbjct: 330 IFIDEIDSICSKRGTGSEHEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWD 389 Query: 338 LDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGAD 517 +D AL R R +++++ +P+++GR ++L ++L++VPL +D ++ +A G GAD Sbjct: 390 IDEALRR--RLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDL--KSIAEKMDGYSGAD 445 Query: 518 LANIVNEAALLAARR 562 + N+ +A+++A RR Sbjct: 446 ITNVCRDASMMAMRR 460
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 137 bits (344), Expect = 3e-32 Identities = 85/213 (39%), Positives = 131/213 (61%), Gaps = 8/213 (3%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKT+LAKAVA E G FF+VS+S + G VR LF+ A+ AP+ Sbjct: 242 VLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTT 301 Query: 182 IFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGF-------DSDVKVIVMAATNRPKA 337 IFIDE+D++ RG S E + + ++LL +MDG D V+V+AATN P Sbjct: 302 IFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWD 361 Query: 338 LDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGAD 517 +D AL R R +++++ +P +GR ++L + LR+V L+ D + + +A+ T G GAD Sbjct: 362 IDEALRR--RLEKRIYIPLPTAKGRAELLKISLREVELDPDVHL--EDIADKTEGYSGAD 417 Query: 518 LANIVNEAALLAARRGGDIVAREDIMDAIEREK 616 + NI +A+L+A RR + ++ E+I A+ +E+ Sbjct: 418 ITNICRDASLMAMRRRINGLSPEEIR-ALSKEE 449
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 137 bits (344), Expect = 3e-32 Identities = 76/188 (40%), Positives = 119/188 (63%), Gaps = 1/188 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGK+ LAKAVA EAG FFS+S+S+ V ++G VR LF+ A+E PSI Sbjct: 165 ILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSI 224 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSALCR 358 IFIDE+D++ GSR ++ + + L +M+G D V+V+ ATN P LDSA+ R Sbjct: 225 IFIDEIDSLCGSRSEGESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRR 284 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 538 RF +++++ +P+ R ++ +++ K+P E S+ +L A +T G G+D++ +V + Sbjct: 285 --RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKEL-AKMTDGYSGSDISIVVRD 341 Query: 539 AALLAARR 562 A + RR Sbjct: 342 AIMEPVRR 349
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 136 bits (343), Expect = 5e-32 Identities = 81/192 (42%), Positives = 114/192 (59%), Gaps = 5/192 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAG-----EAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKE 166 VL GPPGTGKTL+A+A+A E I FF ++ + +VG ++R LF+EAK+ Sbjct: 450 VLFHGPPGTGKTLMARALAASCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAKK 509 Query: 167 AAPSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 346 PSIIF DE+D + R ++ LL MDG D+ +VIV+ ATNRP A+D Sbjct: 510 HQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLALMDGMDNRGQVIVIGATNRPDAVDP 569 Query: 347 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 526 AL RPGRF R+ + +PD++ R KIL + RK + I D +A +T G GADL + Sbjct: 570 ALRRPGRFDREFYFPLPDVKARFKILQIQTRKWSSPLSTNFI-DKLAFLTKGYGGADLRS 628 Query: 527 IVNEAALLAARR 562 + EAAL++ +R Sbjct: 629 LCTEAALISIQR 640
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 136 bits (343), Expect = 5e-32 Identities = 86/213 (40%), Positives = 130/213 (61%), Gaps = 8/213 (3%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKT+LAKAVA E G FF+VS+S + G VR LF+ A+ AP+ Sbjct: 242 VLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTT 301 Query: 182 IFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGF-------DSDVKVIVMAATNRPKA 337 IFIDE+D++ RG S E + + ++LL +MDG D V+V+AATN P Sbjct: 302 IFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWD 361 Query: 338 LDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGAD 517 +D AL R R +++++ +P +GR ++L + LR+V L D +I + +A T G GAD Sbjct: 362 IDEALRR--RLEKRIYIPLPTAKGRAELLKISLREVEL--DPDIHLEDIAEKTEGYSGAD 417 Query: 518 LANIVNEAALLAARRGGDIVAREDIMDAIEREK 616 + NI +A+L+A RR + ++ E+I A+ +E+ Sbjct: 418 ITNICRDASLMAMRRRINGLSPEEIR-ALSKEE 449
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 135 bits (341), Expect = 8e-32 Identities = 78/191 (40%), Positives = 112/191 (58%), Gaps = 4/191 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +L GPPGTGKTLLAKA+A + FFSV E + M++G A VR +F++A++A P + Sbjct: 738 ILFYGPPGTGKTLLAKAIASNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCV 797 Query: 182 IFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSAL 352 IF DELD+V RG + D+ ++QLL E+DG S V V+ ATNRP LD AL Sbjct: 798 IFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSGGDGVFVIGATNRPDLLDEAL 857 Query: 353 CRPGRFSRKVFVGVPDLEGRR-KILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 RPGRF + +++G+ D + ++ I+ RK LE +I+ D+ GAD + Sbjct: 858 LRPGRFDKMLYLGISDTDKKQANIIKALTRKFTLESGIDIL-DIAKKCPFNYTGADFYAL 916 Query: 530 VNEAALLAARR 562 ++A L A R Sbjct: 917 CSDALLNAMTR 927
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 135 bits (340), Expect = 1e-31 Identities = 82/194 (42%), Positives = 112/194 (57%), Gaps = 7/194 (3%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +L GPPGTGKTLLAKA+A + FFSV E + M++G A VR +F+ A++A P + Sbjct: 855 ILFYGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRKVFQRARDAKPCV 914 Query: 182 IFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGF---DSDVKVIVMAATNRPKALDS 346 +F DELD+V RG + E D+ ++QLL E+DG D V V+ ATNRP LD Sbjct: 915 VFFDELDSVAPKRGNQGDSEGVMDRIVSQLLAELDGMSGGDGGDGVFVVGATNRPDLLDE 974 Query: 347 ALCRPGRFSRKVFVGVPDL-EGRRKILAVHLRKVPLEEDSEIICDLVANVTP-GLVGADL 520 AL RPGRF + +++GV D E + KI+ RK L ++ D VA P GAD Sbjct: 975 ALLRPGRFDKMLYLGVSDTHEKQSKIMEALSRKFHLHPSVDL--DKVAESCPFTFTGADF 1032 Query: 521 ANIVNEAALLAARR 562 + ++A L A R Sbjct: 1033 YALCSDAMLNAMTR 1046
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 135 bits (340), Expect = 1e-31 Identities = 82/195 (42%), Positives = 114/195 (58%), Gaps = 8/195 (4%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +L GPPGTGKTLLAKA+A E + FFSV E + M++G A VR +F+ A++A P + Sbjct: 1066 ILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCV 1125 Query: 182 IFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVK----VIVMAATNRPKALD 343 +F DELD+V RG + D+ ++QLL E+DG + + V V+ ATNRP LD Sbjct: 1126 VFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVIGATNRPDLLD 1185 Query: 344 SALCRPGRFSRKVFVGVPDLEGRR-KILAVHLRKVPLEEDSEIICDLVANVTP-GLVGAD 517 +AL RPGRF + +++GV D ++ IL RK L D + D VA P GAD Sbjct: 1186 TALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALHPD--VSLDRVAEQLPLTYTGAD 1243 Query: 518 LANIVNEAALLAARR 562 L + ++A L A R Sbjct: 1244 LYALCSDAMLKAITR 1258
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 135 bits (340), Expect = 1e-31 Identities = 83/213 (38%), Positives = 131/213 (61%), Gaps = 8/213 (3%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKT+LAKAVA E G FF+VS+S + G VR LF+ A+ AP+ Sbjct: 244 VLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTT 303 Query: 182 IFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGF-------DSDVKVIVMAATNRPKA 337 IFIDE+D++ RG S E + + ++LL +MDG D V+V+AATN P Sbjct: 304 IFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWD 363 Query: 338 LDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGAD 517 +D AL R R +++++ +P +GR ++L ++LR+V L+ D ++ + +A G GAD Sbjct: 364 IDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQL--EDIAEKIEGYSGAD 419 Query: 518 LANIVNEAALLAARRGGDIVAREDIMDAIEREK 616 + N+ +A+L+A RR + ++ E+I A+ +E+ Sbjct: 420 ITNVCRDASLMAMRRRINGLSPEEIR-ALSKEE 451
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 135 bits (339), Expect = 1e-31 Identities = 76/184 (41%), Positives = 107/184 (58%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKTLLA +A E+ + F SV E + ++G VRD+F A+ A P I Sbjct: 877 ILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCI 936 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 +F DE +++ RG D+ +NQLLT++DG + V V+AAT+RP +D AL RP Sbjct: 937 LFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRP 996 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GR + V+ PD R +IL V +PL +D ++ VA+VT GADL ++ A Sbjct: 997 GRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDL--QHVASVTDSFTGADLKALLYNA 1054 Query: 542 ALLA 553 L A Sbjct: 1055 QLEA 1058 Score = 38.5 bits (88), Expect = 0.017 Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 22/202 (10%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSAS-EFVEMFVGRGAARVRDL-------FKE 157 +LL G G+GK+ LAKA+ EA F + A E V+ RG R+ ++ F E Sbjct: 595 LLLTGGKGSGKSTLAKAICKEA---FDKLDAHVERVDCKALRG-KRLENIQKTLEVAFSE 650 Query: 158 AKEAAPSIIFIDELDAVGG-----SRGRSFNDERDQTLNQLLTEM-DGFDSDVKVIVMAA 319 A PS++ +D+LD + G S + + Q L L +M F S ++ + A Sbjct: 651 AVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEFISMGSLVALIA 710 Query: 320 TNRPKALDSALCRPGR----FSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDL-- 481 T++ + L + F + P+ E R +IL ++ K L+ D DL Sbjct: 711 TSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILC-NVIKNKLDCDINKFTDLDL 769 Query: 482 --VANVTPGLVGADLANIVNEA 541 VA T G V D +V+ A Sbjct: 770 QHVAKETGGFVARDFTVLVDRA 791
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 134 bits (338), Expect = 2e-31 Identities = 85/212 (40%), Positives = 128/212 (60%), Gaps = 12/212 (5%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 ++LAGPPGTGKTL+A+A+A E+ FF+VS+++ + G VR LF+ A+ APSI Sbjct: 229 MVLAGPPGTGKTLIARAIASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSI 288 Query: 182 IFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDG----FDSDVKVIVMAATNRPKALDS 346 IFIDE+D +GG RG S E + + ++ L +MDG FDS +V V+AATN P LD Sbjct: 289 IFIDEIDTLGGQRGNSGEHEASRRVKSEFLVQMDGSQNKFDSR-RVFVLAATNIPWELDE 347 Query: 347 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 526 AL R RF +++F+ +PD++ R+K++ + P + EI D +A T G GAD+ + Sbjct: 348 ALRR--RFEKRIFIPLPDIDARKKLIEKSMEGTP--KSDEINYDDLAARTEGFSGADVVS 403 Query: 527 IVNEAALLAAR-------RGGDIVAREDIMDA 601 + AA+ R RGG++ A + + A Sbjct: 404 LCRTAAINVLRRYDTKSLRGGELTAAMESLKA 435
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 134 bits (337), Expect = 2e-31 Identities = 77/191 (40%), Positives = 112/191 (58%), Gaps = 4/191 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +L GPPGTGKTLLAKA+A + FFSV E + M++G A VR +F++A++A P + Sbjct: 754 ILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCV 813 Query: 182 IFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSAL 352 IF DE+D+V RG + D+ ++QLL E+DG SD V ++ ATNRP LD AL Sbjct: 814 IFFDEVDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSDGDGVFIIGATNRPDLLDEAL 873 Query: 353 CRPGRFSRKVFVGVPDL-EGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 RPGRF + +++G+ D E + I+ RK + D +LV++ GAD + Sbjct: 874 LRPGRFDKLIYLGIADTREKQANIMRALTRKFKVSSDIN-FDELVSDFPFSYTGADFYAL 932 Query: 530 VNEAALLAARR 562 ++A L A R Sbjct: 933 CSDAMLKAMTR 943
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 134 bits (337), Expect = 2e-31 Identities = 84/199 (42%), Positives = 113/199 (56%), Gaps = 3/199 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPG GKT+LA AVA F V SEFV+ ++G G VRD+F+ AKE +P+I Sbjct: 199 VLMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAI 258 Query: 182 IFIDELDAVGGSR---GRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 IFIDE+DA+ R + E + L +LL +MDGFD V V+ ATNR LD AL Sbjct: 259 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPAL 318 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 RPGR RK+ +PD +R I + K+ L E+ ++ + VA + GAD+ I Sbjct: 319 LRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLE-EFVAR-PDRVSGADINAIC 376 Query: 533 NEAALLAARRGGDIVARED 589 EA + A R IV +D Sbjct: 377 QEAGMNAVRENRYIVLPKD 395
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 133 bits (335), Expect = 4e-31 Identities = 76/192 (39%), Positives = 110/192 (57%), Gaps = 5/192 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPG GKTLLAKAVA E+ F S+ E + +VG +R +F A+ + P + Sbjct: 570 VLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCV 629 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IF DELDA+ R S ++ + +N LLTE+DG + + V+ ATNRP +D A+ RP Sbjct: 630 IFFDELDALVPRRDTSLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRP 689 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRK--VPLEED---SEIICDLVANVTPGLVGADLAN 526 GR + +F+ +P+ E + I+ + PL D EII + N GADLA Sbjct: 690 GRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCN---NFSGADLAA 746 Query: 527 IVNEAALLAARR 562 +V E+++LA +R Sbjct: 747 LVRESSVLALKR 758 Score = 130 bits (327), Expect = 3e-30 Identities = 81/194 (41%), Positives = 112/194 (57%), Gaps = 7/194 (3%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPG GKT +A A+AGE +PF S+SA V G ++RDLF EA+ AP + Sbjct: 242 VLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCL 301 Query: 182 IFIDELDAVGGSR-GRSFNDERDQTLNQLLTEMDGFDSD----VKVIVMAATNRPKALDS 346 +F DE+DA+ R G + + + + QLLT MD + VI++ ATNRP +LD+ Sbjct: 302 VFFDEIDAITPKRDGGAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDA 361 Query: 347 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVP--LEEDSEIICDLVANVTPGLVGADL 520 AL R GRF R++ + VP+ R I L+K+ L+ D I +A +TPG VGADL Sbjct: 362 ALRRAGRFDREICLNVPNEVSRLHI----LKKMSDNLKIDGAIDFAKLAKLTPGFVGADL 417 Query: 521 ANIVNEAALLAARR 562 +V A A +R Sbjct: 418 KALVTAAGTCAIKR 431
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 133 bits (335), Expect = 4e-31 Identities = 85/216 (39%), Positives = 121/216 (56%), Gaps = 9/216 (4%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +L GPPGTGKTLLAKA+A E + FFSV E + M++G A VR +F+ A++A P + Sbjct: 1030 ILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCV 1089 Query: 182 IFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGF----DSDVKVIVMAATNRPKALD 343 +F DELD+V RG + D+ ++QLL E+DG D+ V V+ ATNRP LD Sbjct: 1090 VFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLLD 1149 Query: 344 SALCRPGRFSRKVFVGVPDLEGRR-KILAVHLRKVPLEEDSEIICDLVANVTP-GLVGAD 517 AL RPGRF + +++GV D ++ KIL RK L + VA P GAD Sbjct: 1150 PALLRPGRFDKMLYLGVSDTHDKQLKILEALTRKFTLH--PSVSLHSVAQQLPFTYTGAD 1207 Query: 518 LANIVNEAALLA-ARRGGDIVAREDIMDAIEREKYG 622 + ++A L A R+ + A+ ++A R + G Sbjct: 1208 FYALCSDAMLKAVTRQAASVDAKIRELEAQPRSRTG 1243
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 133 bits (335), Expect = 4e-31 Identities = 80/205 (39%), Positives = 122/205 (59%), Gaps = 8/205 (3%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKTLLAKAVA E FF++S+S + G VR LF+ A+ AP+ Sbjct: 242 VLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTT 301 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLN-QLLTEMDGF-------DSDVKVIVMAATNRPKA 337 IFIDE+D++ RG S E + + +LL +MDG D V+V+AATN P Sbjct: 302 IFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWD 361 Query: 338 LDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGAD 517 +D AL R R +++++ +P +GR ++L ++L+++ L +D I C +A G GAD Sbjct: 362 IDEALRR--RLEKRIYIPLPSAKGREELLRINLKELELADDVNIEC--IAENMDGYSGAD 417 Query: 518 LANIVNEAALLAARRGGDIVAREDI 592 + N+ +A+L+A RR + + E+I Sbjct: 418 ITNVCRDASLMAMRRRIEGLTPEEI 442
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 133 bits (334), Expect = 5e-31 Identities = 80/191 (41%), Positives = 111/191 (58%), Gaps = 4/191 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +L GPPGTGKTLLAKAVA + FFSV E + M++G A VR +F+ A++A P + Sbjct: 759 ILFYGPPGTGKTLLAKAVATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCV 818 Query: 182 IFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSAL 352 IF DELD+V RG + D+ ++QLL E+DG + + V+ ATNRP LD AL Sbjct: 819 IFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGLSTGGDGLFVIGATNRPDLLDEAL 878 Query: 353 CRPGRFSRKVFVGVPDL-EGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 RPGRF + +++G+ D E + IL RK L+ D + DL A+ GAD + Sbjct: 879 LRPGRFDKLLYLGISDTNEKQANILRALTRKFTLDPDVS-LDDLAASCPFTYTGADFYAL 937 Query: 530 VNEAALLAARR 562 ++A L A R Sbjct: 938 CSDAMLNAMTR 948
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 132 bits (332), Expect = 9e-31 Identities = 76/215 (35%), Positives = 114/215 (53%), Gaps = 9/215 (4%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL G PG GKTLLA AVA + G+ F SV E + F+G +R+LF+ A+ P I Sbjct: 734 ILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCI 793 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 +F DE D++ RG D+ +NQLLT+MDG + V ++AAT+RP +DSAL RP Sbjct: 794 LFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRP 853 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHL---------RKVPLEEDSEIICDLVANVTPGLVGA 514 GR + V +P R IL + +K LE+++++ L+A T G GA Sbjct: 854 GRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADL--KLIAEKTAGFSGA 911 Query: 515 DLANIVNEAALLAARRGGDIVAREDIMDAIEREKY 619 DL + A L + R + +++ + +Y Sbjct: 912 DLQGLCYNAYLKSVHRWLSAADQSEVVPGNDNIEY 946
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 132 bits (331), Expect = 1e-30 Identities = 78/188 (41%), Positives = 116/188 (61%), Gaps = 1/188 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGK+ LAKAVA EA FFSVS+S+ V ++G V+ LF A+E PSI Sbjct: 169 ILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSI 228 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSALCR 358 IFIDE+DA+ G+RG ++ + +LL +M+G +D + V+V+ ATN P LDSA+ R Sbjct: 229 IFIDEVDALTGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRR 288 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 538 RF R++++ +PDL R + +++ P E L A +T G G+D+A +V + Sbjct: 289 --RFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGA-MTEGYSGSDIAVVVKD 345 Query: 539 AALLAARR 562 A + R+ Sbjct: 346 ALMQPIRK 353
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 131 bits (330), Expect = 1e-30 Identities = 76/195 (38%), Positives = 113/195 (57%), Gaps = 8/195 (4%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +L GPPGTGKTLLAKA+A + FFSV E + M++G A VR +F++A++A P + Sbjct: 875 ILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCV 934 Query: 182 IFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVK-----VIVMAATNRPKAL 340 IF DELD+V RG + D+ ++QLL E+DG + V V+ ATNRP L Sbjct: 935 IFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGAEGGGDGVFVVGATNRPDLL 994 Query: 341 DSALCRPGRFSRKVFVGVPDL-EGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGAD 517 D AL RPGRF + +++G+ D E + KIL RK L ++ ++ ++ + GAD Sbjct: 995 DEALLRPGRFDKMLYLGISDTDEKQSKILEALTRKFKLADNVDLY-EIAKRCSFTFTGAD 1053 Query: 518 LANIVNEAALLAARR 562 + +++ L A R Sbjct: 1054 FYALCSDSMLNAMTR 1068
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 131 bits (330), Expect = 1e-30 Identities = 80/214 (37%), Positives = 125/214 (58%), Gaps = 8/214 (3%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKTLLAKAVA E FF+VS+S + G VR LF+ A+ +P+ Sbjct: 245 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPAT 304 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLN-QLLTEMDGF-------DSDVKVIVMAATNRPKA 337 IFIDE+D++ RG S E + + +LL +MDG D V+V+AATN P Sbjct: 305 IFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWD 364 Query: 338 LDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGAD 517 +D AL R R +++++ +P +GR ++L + LR++ L +D ++ +A G GAD Sbjct: 365 IDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVDLAS--IAENMEGYSGAD 420 Query: 518 LANIVNEAALLAARRGGDIVAREDIMDAIEREKY 619 + N+ +A+L+A RR + + E+I + + E + Sbjct: 421 ITNVCRDASLMAMRRRIEGLTPEEIRNLSKEEMH 454
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 131 bits (329), Expect = 2e-30 Identities = 80/202 (39%), Positives = 114/202 (56%), Gaps = 7/202 (3%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +L GPPGTGKTLLAKA+A + FFSV E + M++G A VR +F++A++A P + Sbjct: 849 ILFYGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCV 908 Query: 182 IFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGF---DSDVKVIVMAATNRPKALDS 346 IF DELD+V RG + D+ ++QLL E+DG + V V+ ATNRP LD Sbjct: 909 IFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGAEGGDGVFVVGATNRPDLLDE 968 Query: 347 ALCRPGRFSRKVFVGVPDL-EGRRKILAVHLRKVPLEEDSEIICDLVANVTP-GLVGADL 520 AL RPGRF + +++G+ D E + KI+ RK L D + +A P GAD Sbjct: 969 ALLRPGRFDKMLYLGIADTHEKQAKIIQALTRKFQL--DPSVDLGRIAETCPFTYTGADF 1026 Query: 521 ANIVNEAALLAARRGGDIVARE 586 + ++A L A R V ++ Sbjct: 1027 YALCSDAMLNAMTRTAGAVEKK 1048
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 130 bits (328), Expect = 3e-30 Identities = 73/184 (39%), Positives = 102/184 (55%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL G PG GKTLLA AVA + G+ F S+ E + ++G VR+LF+ A+ A P I Sbjct: 836 ILLYGYPGCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERAQAAKPCI 895 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 +F DE D++ RG D+ +NQ+LT+MDG + V V+AAT+RP +DSAL RP Sbjct: 896 LFFDEFDSIAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRP 955 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 GR + V +PD + R IL R + + + + VA G GADL + A Sbjct: 956 GRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNL--SSVAGECSGFSGADLQALAYNA 1013 Query: 542 ALLA 553 L A Sbjct: 1014 YLKA 1017 Score = 42.4 bits (98), Expect = 0.001 Identities = 40/203 (19%), Positives = 89/203 (43%), Gaps = 4/203 (1%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAG---EAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP 175 LL G G+GK+L+ VA G ++ + + D+F E AP Sbjct: 520 LLFGTSGSGKSLVISQVAQIVTNKGHFVKLLNCDKIMSESYNNLRGIFEDIFSEVSWKAP 579 Query: 176 SIIFIDELDA-VGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 S++ +++LD+ + + S + + Q ++++ + + ++A++ ++L+S + Sbjct: 580 SLLILEDLDSLIPAEQEHSDSSQSRQLSEYFISKLSAQTINRDITILASSKSKESLNSLI 639 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIV 532 + PD E R++IL +L + + + + +A T G + DL Sbjct: 640 FTTHLIEHDFQLRAPDKEARKQILQSYLDTLNVFCSEGELLNNIAVETEGYLPKDL---- 695 Query: 533 NEAALLAARRGGDIVAREDIMDA 601 +L R D+++R+ + D+ Sbjct: 696 ---KVLCDRAYHDLISRDILADS 715
>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 381 Score = 130 bits (327), Expect = 3e-30 Identities = 70/121 (57%), Positives = 88/121 (72%), Gaps = 3/121 (2%) Frame = +2 Query: 206 VGGSRGRSF---NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRPGRFSR 376 +G RG +DER+QTLNQ+L EMDGF + VIV+AATNRP LD AL RPGRF R Sbjct: 1 MGRQRGAGLGGGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDR 60 Query: 377 KVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLAA 556 +V VG+PD++GR +IL VH+RKV + +D + + +A TPG GADLAN+VNEAAL AA Sbjct: 61 QVVVGLPDVKGREQILKVHMRKVSVAQDVDAM--TLARGTPGYSGADLANLVNEAALFAA 118 Query: 557 R 559 R Sbjct: 119 R 119
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 130 bits (327), Expect = 3e-30 Identities = 80/214 (37%), Positives = 123/214 (57%), Gaps = 8/214 (3%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKTLLAKAVA E FF+VS+S + G VR LF+ A+ +P+ Sbjct: 245 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPAT 304 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLN-QLLTEMDGF-------DSDVKVIVMAATNRPKA 337 IFIDE+D++ RG S E + + +LL +MDG D V+V+AATN P Sbjct: 305 IFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWD 364 Query: 338 LDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGAD 517 +D AL R R +++++ +P +GR ++L + LR++ L +D + +A G GAD Sbjct: 365 IDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLAS--IAENMEGYSGAD 420 Query: 518 LANIVNEAALLAARRGGDIVAREDIMDAIEREKY 619 + N+ +A+L+A RR + + E+I + E + Sbjct: 421 ITNVCRDASLMAMRRRIEGLTPEEIRNLSREEMH 454
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 129 bits (325), Expect = 6e-30 Identities = 79/205 (38%), Positives = 120/205 (58%), Gaps = 8/205 (3%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKTLLAKAVA E FF+VS+S + G VR LF+ A+ +P+ Sbjct: 245 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPAT 304 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLN-QLLTEMDGF-------DSDVKVIVMAATNRPKA 337 IFIDE+D++ RG S E + + +LL +MDG D V+V+AATN P Sbjct: 305 IFIDEIDSICSRRGTSEEHEASRRMKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWD 364 Query: 338 LDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGAD 517 +D AL R R +++++ +P +GR ++L + LR++ L +D + +A G GAD Sbjct: 365 IDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLAS--IAENMEGYSGAD 420 Query: 518 LANIVNEAALLAARRGGDIVAREDI 592 + N+ +A+L+A RR + + E+I Sbjct: 421 ITNVCRDASLMAMRRRIEGLTPEEI 445
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 127 bits (320), Expect = 2e-29 Identities = 76/193 (39%), Positives = 112/193 (58%), Gaps = 6/193 (3%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +L GPPGTGKTLLAKA+A + FFSV E + M++G A VR +F++A++A P + Sbjct: 755 ILFYGPPGTGKTLLAKAIATTFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCV 814 Query: 182 IFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDS--DVKVIVMAATNRPKALDSA 349 +F DELD+V RG + D+ ++QLL E+DG + V V+ ATNRP LD A Sbjct: 815 VFFDELDSVAPQRGNQGDSGGVMDRIVSQLLAELDGMSTAGGEGVFVVGATNRPDLLDEA 874 Query: 350 LCRPGRFSRKVFVGVPDL-EGRRKILAVHLRKVPLEEDSEIICDLVANVTP-GLVGADLA 523 L RPGRF + +++G+ D E ++ I+ RK L D + + ++ P GAD Sbjct: 875 LLRPGRFDKMLYLGISDTHEKQQTIMEALTRKFRLAAD--VSLEAISKRCPFTFTGADFY 932 Query: 524 NIVNEAALLAARR 562 + ++A L A R Sbjct: 933 ALCSDAMLNAMTR 945
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 127 bits (319), Expect = 3e-29 Identities = 79/196 (40%), Positives = 115/196 (58%), Gaps = 9/196 (4%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL+ GPPGTGKTLLAKAVA E G FF+VS++ + G VR LF A+ APS Sbjct: 275 VLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPST 334 Query: 182 IFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGFDSDVK--------VIVMAATNRPK 334 IFIDE+D++ SRG S E + + ++LL ++DG + V+V+AATN P Sbjct: 335 IFIDEIDSLCNSRGGSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPW 394 Query: 335 ALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGA 514 +D AL R R +++++ +PD E R+ ++ ++LR V + D I + VA T G G Sbjct: 395 DIDEALRR--RLEKRIYIPLPDFESRKALININLRTVEVASDVNI--EDVARRTEGYSGD 450 Query: 515 DLANIVNEAALLAARR 562 DL N+ +A++ RR Sbjct: 451 DLTNVCRDASMNGMRR 466
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 126 bits (317), Expect = 5e-29 Identities = 73/198 (36%), Positives = 108/198 (54%), Gaps = 6/198 (3%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +L GPPGTGKTLLAKA+A E + FFSV E + M++G A VR +F+ A++A P + Sbjct: 1027 ILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCV 1086 Query: 182 IFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDV----KVIVMAATNRPKALD 343 +F DELD+V RG + D+ ++QLL E+DG V V+ ATNRP LD Sbjct: 1087 VFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGEGGGGGVFVIGATNRPDLLD 1146 Query: 344 SALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLA 523 AL RPGRF + +++GV D ++ + L + + + + + GAD Sbjct: 1147 PALLRPGRFDKMLYLGVSDTHDKQVTIMEALTRKFTLHPTVSLRSVAERLPFTYTGADFY 1206 Query: 524 NIVNEAALLAARRGGDIV 577 + ++A L A R +V Sbjct: 1207 ALCSDAMLKAVTRQATLV 1224
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 126 bits (316), Expect = 6e-29 Identities = 75/191 (39%), Positives = 107/191 (56%), Gaps = 5/191 (2%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAG-----IPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 169 L GPPGTGKTL+A+A+A E + FF ++ + +VG ++R LF +A + Sbjct: 295 LFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQM 354 Query: 170 APSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 349 PSIIF DE+D + R + ++ LL MDG DS +++V+ ATNR A+D A Sbjct: 355 RPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDAIDPA 414 Query: 350 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 L RPGRF R+ +PD E R++IL +H R + + +L N G GAD+ +I Sbjct: 415 LRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCV-GYRGADIKSI 473 Query: 530 VNEAALLAARR 562 EAAL A RR Sbjct: 474 CAEAALCALRR 484
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 125 bits (315), Expect = 8e-29 Identities = 74/191 (38%), Positives = 107/191 (56%), Gaps = 5/191 (2%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAG-----IPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 169 L GPPGTGKTL+A+A+A E + FF ++ + +VG ++R LF +A + Sbjct: 464 LFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQM 523 Query: 170 APSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 349 PSIIF DE+D + R + ++ LL MDG DS +++V+ ATNR ++D A Sbjct: 524 RPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPA 583 Query: 350 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 L RPGRF R+ +PD E R++IL +H R + + +L N G GAD+ +I Sbjct: 584 LRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCV-GYCGADIKSI 642 Query: 530 VNEAALLAARR 562 EAAL A RR Sbjct: 643 CAEAALCALRR 653
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 125 bits (315), Expect = 8e-29 Identities = 78/205 (38%), Positives = 119/205 (58%), Gaps = 15/205 (7%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKT++AKAVA E+ FFSVSAS + ++G VR LF AK+ +PSI Sbjct: 507 MLLFGPPGTGKTMIAKAVATESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSI 566 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDS------------DVKVIVMAATN 325 IFIDE+D++ +R + N+ + +LL + S D +V+V+ ATN Sbjct: 567 IFIDEIDSMLTARSDNENESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGATN 626 Query: 326 RPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDS---EIICDLVANVT 496 P A+D A R RFSRK+++ +PD E R HL+++ ++ + ++ +L+ +T Sbjct: 627 LPWAIDDAARR--RFSRKLYIPLPDYETR----LYHLKRLMAKQKNSLQDLDYELITEMT 680 Query: 497 PGLVGADLANIVNEAALLAARRGGD 571 G G+DL ++ EAA+ R GD Sbjct: 681 EGFSGSDLTSLAKEAAMEPIRDLGD 705
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 125 bits (313), Expect = 1e-28 Identities = 74/191 (38%), Positives = 103/191 (53%), Gaps = 5/191 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAG-----IPFFSVSASEFVEMFVGRGAARVRDLFKEAKE 166 V+ GPPGTGKTL+A+A+A E + FF ++ + +VG ++R LF +A Sbjct: 428 VVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYA 487 Query: 167 AAPSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 346 PSIIF DE+D + R + ++ LL MDG D +V+V+ ATNR LD Sbjct: 488 MRPSIIFFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDP 547 Query: 347 ALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLAN 526 AL RPGRF R++ +PDL RR+IL +H K + D +A T G GADL Sbjct: 548 ALRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKF 607 Query: 527 IVNEAALLAAR 559 + EA L+ R Sbjct: 608 LCTEAVLIGLR 618
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 125 bits (313), Expect = 1e-28 Identities = 78/184 (42%), Positives = 108/184 (58%), Gaps = 2/184 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPG GKT+LAKAVA E+ FF++SA+ +VG G VR LF A+E PSI Sbjct: 376 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSI 435 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDS--DVKVIVMAATNRPKALDSALC 355 IFIDE+D++ R +D + + L E DG S D +V+VM ATNRP+ LD A+ Sbjct: 436 IFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVL 495 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 R RF ++V+V +P+ E R +L L K + + L A +T G G+DL + Sbjct: 496 R--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQL-ARMTDGYSGSDLTALAK 552 Query: 536 EAAL 547 +AAL Sbjct: 553 DAAL 556
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 125 bits (313), Expect = 1e-28 Identities = 78/184 (42%), Positives = 108/184 (58%), Gaps = 2/184 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPG GKT+LAKAVA E+ FF++SA+ +VG G VR LF A+E PSI Sbjct: 378 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSI 437 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDS--DVKVIVMAATNRPKALDSALC 355 IFIDE+D++ R +D + + L E DG S D +V+VM ATNRP+ LD A+ Sbjct: 438 IFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVL 497 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 R RF ++V+V +P+ E R +L L K + + L A +T G G+DL + Sbjct: 498 R--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQL-ARMTDGYSGSDLTALAK 554 Query: 536 EAAL 547 +AAL Sbjct: 555 DAAL 558
>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 124 bits (312), Expect = 2e-28 Identities = 68/183 (37%), Positives = 111/183 (60%), Gaps = 1/183 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL G PGTGKT+LAK++A E +P + + A+ + VG GA ++ +L++ A + APS+ Sbjct: 160 VLFHGSPGTGKTMLAKSLANELRVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSV 219 Query: 182 IFIDELDAVG-GSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 358 IFIDE+DA+G R +S + + +N LLTEMDG + + V+ + ATN P+ LD+A+ Sbjct: 220 IFIDEMDAIGLDRRFQSLRGDVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDNAI-- 277 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 538 RF ++ +P + RR +L ++ +PL+ D + D + +T G+ G D+ V + Sbjct: 278 RSRFEEEIEFKLPGDDERRMMLEKYIETMPLDVDFSV--DKLVKLTKGMSGRDIKERVLK 335 Query: 539 AAL 547 AL Sbjct: 336 TAL 338
>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 124 bits (311), Expect = 2e-28 Identities = 74/207 (35%), Positives = 120/207 (57%), Gaps = 2/207 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL G PGTGKT+LAK++A E +P + + A+ + VG GA ++ +L++ A + APS+ Sbjct: 160 VLFHGSPGTGKTMLAKSLANELKVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSV 219 Query: 182 IFIDELDAVG-GSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 358 IFIDE+DA+G R +S + + +N LLTEMDG + + V+ + ATN P+ LD A+ Sbjct: 220 IFIDEMDAIGLDRRYQSLRGDVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDKAI-- 277 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 538 RF ++ +PD E R+ +L ++ +PL+ D + D + +T + G D+ + V + Sbjct: 278 RSRFEEEIEFKLPDDEERKLMLEKYIETMPLKVDFPV--DKLVKLTREMSGRDIKDRVLK 335 Query: 539 AAL-LAARRGGDIVAREDIMDAIEREK 616 AL A + V E I A++ K Sbjct: 336 TALHRAIAEDSESVRAEHIEYALKERK 362
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 123 bits (309), Expect = 4e-28 Identities = 77/205 (37%), Positives = 117/205 (57%), Gaps = 2/205 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VL GPPGTGKTL+A+A+A E F V A E + VG + +R+L++ A E+AP I Sbjct: 157 VLFYGPPGTGKTLMARALATETNSSFILVKAPELIGEHVGDASKMIRELYQRASESAPCI 216 Query: 182 IFIDELDAVGGSRG-RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 358 +FIDELDA+G SR +S + + +N LLTE+DG + V+ +AATN P LD A+ Sbjct: 217 VFIDELDAIGLSREYQSLRGDVSEVVNALLTELDGIKENEGVVTIAATNNPAMLDPAI-- 274 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 538 RF ++ +P+ E R KI+ ++ +K+PL + + T G G D+ + Sbjct: 275 RSRFEEEIEFKLPNDEERLKIMELYAKKMPLPVKANL--KEFVEKTKGFSGRDIKEKFLK 332 Query: 539 AAL-LAARRGGDIVAREDIMDAIER 610 AL A D V++ED+ A+++ Sbjct: 333 PALHRAILEDRDYVSKEDLEWALKK 357
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 121 bits (304), Expect = 2e-27 Identities = 71/191 (37%), Positives = 107/191 (56%), Gaps = 5/191 (2%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAG-----IPFFSVSASEFVEMFVGRGAARVRDLFKEAKEA 169 L GPPGTGKTL+A+A+A E + FF ++ + +VG ++R LF +A + Sbjct: 119 LFYGPPGTGKTLVARALANECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQM 178 Query: 170 APSIIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSA 349 P+IIF DE+D + R + ++ LL MDG DS +++V+ ATNR ++D A Sbjct: 179 RPAIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPA 238 Query: 350 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 L RPGRF R+ +PD R++IL +H R + ++ + +A G GAD+ +I Sbjct: 239 LRRPGRFDREFLFSLPDKNARKEILKIHTRDWN-PKPVDMFLEELAEHCVGYCGADIKSI 297 Query: 530 VNEAALLAARR 562 EAAL A RR Sbjct: 298 CAEAALCALRR 308
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 117 bits (292), Expect = 4e-26 Identities = 71/189 (37%), Positives = 111/189 (58%), Gaps = 2/189 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAG-IPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 178 +LL GPPGTGK+ LAKAVA EA FFS+S+S+ V ++G V++LF+ A+E PS Sbjct: 170 ILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPS 229 Query: 179 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSALC 355 IIFIDE+D++ GSR + ++ + + L +M G D ++V+ ATN P LDSA+ Sbjct: 230 IIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIR 289 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 R RF +++++ +P+ R + +HL +E + T G GAD++ IV Sbjct: 290 R--RFEKRIYIPLPEAHARAAMFRLHLGSTQ-NSLTEADFQELGRKTDGYSGADISIIVR 346 Query: 536 EAALLAARR 562 +A + R+ Sbjct: 347 DALMQPVRK 355
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 117 bits (292), Expect = 4e-26 Identities = 71/189 (37%), Positives = 115/189 (60%), Gaps = 2/189 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAG-IPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 178 +LL GPPGTGK+ LAKAVA EA FFSVS+S+ + ++G V++LF+ A++ PS Sbjct: 163 ILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPS 222 Query: 179 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGF-DSDVKVIVMAATNRPKALDSALC 355 IIFIDE+D++ GSR + ++ + + L +M G +++ +V+ ATN P LDSA+ Sbjct: 223 IIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIR 282 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 R RF +++++ +P+ R ++ +HL P I +L A T G GAD++ IV Sbjct: 283 R--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHEL-ARKTEGYSGADISIIVR 339 Query: 536 EAALLAARR 562 ++ + R+ Sbjct: 340 DSLMQPVRK 348
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 117 bits (292), Expect = 4e-26 Identities = 71/189 (37%), Positives = 115/189 (60%), Gaps = 2/189 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAG-IPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 178 +LL GPPGTGK+ LAKAVA EA FFSVS+S+ + ++G V++LF+ A++ PS Sbjct: 163 ILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPS 222 Query: 179 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGF-DSDVKVIVMAATNRPKALDSALC 355 IIFIDE+D++ GSR + ++ + + L +M G +++ +V+ ATN P LDSA+ Sbjct: 223 IIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIR 282 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 R RF +++++ +P+ R ++ +HL P I +L A T G GAD++ IV Sbjct: 283 R--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHEL-ARKTEGYSGADISIIVR 339 Query: 536 EAALLAARR 562 ++ + R+ Sbjct: 340 DSLMQPVRK 348
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 116 bits (290), Expect = 6e-26 Identities = 82/229 (35%), Positives = 117/229 (51%), Gaps = 27/229 (11%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 L AGPPGTGKTL+AKA++ EA P+ V S+F G ARV DLFK+ + +P I+ Sbjct: 382 LFAGPPGTGKTLMAKAMSYEAETPYLYVEGSQFRCREEGVANARVDDLFKQIQNISPCIL 441 Query: 185 FIDELDAVGGSR------------------GRSFNDER---DQTLNQLLTEMDGFDSDVK 301 +IDE+D++ R G + N ++ D L Q L MDG+ Sbjct: 442 YIDEIDSIAERREEANKQLEQLKTIGDSIEGSNINIDQKPSDTVLMQFLIYMDGYKKRND 501 Query: 302 VIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDL 481 +I++ ATNR + LD A+ RPGRF R++ P E R+ IL + LR D + + Sbjct: 502 LIIIGATNRIETLDDAIMRPGRFDRQIVFSPPFFEERKDILRIFLRNTKALVD-DTTKTM 560 Query: 482 VANVTPGLVGADLANIVNEAALLAARRGGD-----IVAREDIMD-AIER 610 +A + GL G DL + + LL+A + V ED D A+ER Sbjct: 561 MAERSIGLNGCDLRLLADNILLLSALESRNQQKTIPVINEDTFDRALER 609
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 115 bits (288), Expect = 1e-25 Identities = 72/191 (37%), Positives = 113/191 (59%), Gaps = 4/191 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAG-IPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 178 +LL GPPGTGK+ LAKAVA EA FFS+S+S+ V ++G V++LF+ A+E PS Sbjct: 170 ILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPS 229 Query: 179 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVK-VIVMAATNRPKALDSALC 355 IIFIDE+D++ GSR + ++ + + L +M G D ++V+ ATN P LDSA+ Sbjct: 230 IIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIR 289 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDL--VANVTPGLVGADLANI 529 R RF +++++ +P+ R + +HL ++S D + T G GAD++ I Sbjct: 290 R--RFEKRIYIPLPEPHARAAMFKLHLGTT---QNSLTEADFRELGRKTDGYSGADISII 344 Query: 530 VNEAALLAARR 562 V +A + R+ Sbjct: 345 VRDALMQPVRK 355
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 114 bits (286), Expect = 2e-25 Identities = 75/214 (35%), Positives = 116/214 (54%), Gaps = 24/214 (11%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPGTGKT+LA+AVA E+ FFS+SAS ++G VR LF AK+ +PSI Sbjct: 641 MLLFGPPGTGKTMLARAVATESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPSI 700 Query: 182 IFIDELDAVGGSRGRSFNDERDQTL-NQLL--------------------TEMDGFDSDV 298 IF+DE+D++ GSR +E + + N+ L ++ +G + D Sbjct: 701 IFVDEIDSIMGSRNNENENESSRRIKNEFLVQWSSLSSAAAGSNKSNTNNSDTNGDEDDT 760 Query: 299 KVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRR---KILAVHLRKVPLEEDSEI 469 +V+V+AATN P ++D A R RF R+ ++ +P+ + R K L H + E D Sbjct: 761 RVLVLAATNLPWSIDEAARR--RFVRRQYIPLPEDQTRHVQFKKLLSHQKHTLTESD--- 815 Query: 470 ICDLVANVTPGLVGADLANIVNEAALLAARRGGD 571 D + +T G G+D+ ++ +AA+ R GD Sbjct: 816 -FDELVKITEGYSGSDITSLAKDAAMGPLRDLGD 848
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 112 bits (280), Expect = 9e-25 Identities = 70/186 (37%), Positives = 105/186 (56%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPG GKT+LAKA+A E+G F S+ S ++ + G V +F A + P I Sbjct: 129 VLLYGPPGCGKTMLAKALAKESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCI 188 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRP 361 IFIDE+D+ R + ++ + +T DG ++ +V+++ ATNR +D A R Sbjct: 189 IFIDEIDSFLRERSSTDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFLR- 247 Query: 362 GRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEA 541 R ++ V +P + R KIL+V L+ L+ED E L+A+ T G G+DL + EA Sbjct: 248 -RLPKRFLVSLPGSDQRYKILSVLLKDTKLDED-EFDLQLIADNTKGFSGSDLKELCREA 305 Query: 542 ALLAAR 559 AL AA+ Sbjct: 306 ALDAAK 311
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 112 bits (280), Expect = 9e-25 Identities = 84/244 (34%), Positives = 126/244 (51%), Gaps = 35/244 (14%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAK- 163 +LL GPPGTGKTL+A+ + A E I V+ E + +VG+ VR LF +A+ Sbjct: 307 ILLYGPPGTGKTLIARQIGKMLNAREPKI----VNGPEILNKYVGQSEENVRKLFADAER 362 Query: 164 -------EAAPSIIFIDELDAVGGSRGRSFNDER--DQTLNQLLTEMDGFDSDVKVIVMA 316 E+ II DELDA+ RG S D DQ +NQLL +MDG D ++V+ Sbjct: 363 EYRDRGEESGLHIIIFDELDAICKKRGSSGGDTGVGDQVVNQLLAKMDGVDQLNNILVIG 422 Query: 317 ATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVP----LEEDSEIICDLV 484 TNR +D AL RPGR + + +PD GR +IL +H ++ LE D ++ + + Sbjct: 423 MTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDM--EEL 480 Query: 485 ANVTPGLVGADLANIVNEAALLAARR----------GGDI----VAREDIMDAIE--REK 616 A++T GA++A ++ A+ A R G++ V R D ++A+ R Sbjct: 481 ASLTKNFSGAEIAGLIKSASSFAFYRHIKVGTTAAVSGNLENIKVNRNDFLNALSEVRPA 540 Query: 617 YGVN 628 YGV+ Sbjct: 541 YGVS 544 Score = 43.1 bits (100), Expect = 7e-04 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFS-VSASEFVEMFVGRGAARVRDLFKEAKEAAPS 178 VLL+GP +GKT LA +A + PF VSA V M A V +F+++ ++ S Sbjct: 588 VLLSGPIASGKTALAATIALGSEFPFVKLVSAESMVGMNENARVAHVNRVFEDSYKSPLS 647 Query: 179 IIFIDELDAV 208 +I +DE++ + Sbjct: 648 VIVVDEIERI 657
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 111 bits (278), Expect = 2e-24 Identities = 79/220 (35%), Positives = 113/220 (51%), Gaps = 15/220 (6%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPG GKTL+AKA A EAG F ++ S + + G +F A + PSI Sbjct: 133 VLLYGPPGCGKTLIAKATAKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSI 192 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSD--VKVIVMAATNRPKALDSALC 355 IFIDE+D+ +R S ++ Q ++ DG D+D +VI+M ATNRP+ LDSA+ Sbjct: 193 IFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAIL 252 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 R R + + P++ R+ IL + L +E E+ +A T G G+DL + Sbjct: 253 R--RMPTRFHINQPNVRQRKDILKLILENENVESAVEL--SEIAKQTDGFSGSDLREMCR 308 Query: 536 EAALLAARRGGDIV-------------AREDIMDAIEREK 616 +AALL R D V +ED+ AIE+ K Sbjct: 309 DAALLCVR---DFVHQESPEEDFIRPIRQEDLQRAIEKMK 345
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 110 bits (276), Expect = 3e-24 Identities = 72/188 (38%), Positives = 103/188 (54%), Gaps = 2/188 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPG GKTL+AKA A EAG F ++ S + + G +F A + PSI Sbjct: 129 VLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSI 188 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSD--VKVIVMAATNRPKALDSALC 355 IFIDE+D+ +R S ++ Q ++ DG D+D +VIVM ATNRP+ LDSA+ Sbjct: 189 IFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIM 248 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 R R + + P L+ R IL + L+ ++ +++ VA T G G+DL + Sbjct: 249 R--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLL--EVAQETDGFSGSDLKEMCR 304 Query: 536 EAALLAAR 559 +AALL R Sbjct: 305 DAALLCVR 312
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 110 bits (276), Expect = 3e-24 Identities = 72/188 (38%), Positives = 103/188 (54%), Gaps = 2/188 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPG GKTL+AKA A EAG F ++ S + + G +F A + PSI Sbjct: 129 VLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSI 188 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSD--VKVIVMAATNRPKALDSALC 355 IFIDE+D+ +R S ++ Q ++ DG D+D +VIVM ATNRP+ LDSA+ Sbjct: 189 IFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIM 248 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 R R + + P L+ R IL + L+ ++ +++ VA T G G+DL + Sbjct: 249 R--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLL--EVAQETDGFSGSDLKEMCR 304 Query: 536 EAALLAAR 559 +AALL R Sbjct: 305 DAALLCVR 312
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 110 bits (276), Expect = 3e-24 Identities = 72/188 (38%), Positives = 103/188 (54%), Gaps = 2/188 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPG GKTL+AKA A EAG F ++ S + + G +F A + PSI Sbjct: 129 VLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSI 188 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSD--VKVIVMAATNRPKALDSALC 355 IFIDE+D+ +R S ++ Q ++ DG D+D +VIVM ATNRP+ LDSA+ Sbjct: 189 IFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIM 248 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 R R + + P L+ R IL + L+ ++ +++ VA T G G+DL + Sbjct: 249 R--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLL--EVAQETDGFSGSDLKEMCR 304 Query: 536 EAALLAAR 559 +AALL R Sbjct: 305 DAALLCVR 312
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 109 bits (272), Expect = 8e-24 Identities = 68/201 (33%), Positives = 110/201 (54%), Gaps = 14/201 (6%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEA-GIPFFSVSASEFVEMFVGRGAARVRDLFKEAK----- 163 +LL GPPGTGKTL+A+ ++ G V+ E + +VG +R+LFK+A+ Sbjct: 313 LLLYGPPGTGKTLIARKLSKMLNGKEPKIVNGPEMLSKYVGASEENIRNLFKDAEAEYKL 372 Query: 164 ---EAAPSIIFIDELDAVGGSRGRSFNDER---DQTLNQLLTEMDGFDSDVKVIVMAATN 325 ++ +I DELD+V RG +D D +NQLL++MDG D ++V+ TN Sbjct: 373 KGEDSDLHVIIFDELDSVFKQRGSGKSDGTGVGDNVVNQLLSKMDGVDQLNNILVIGMTN 432 Query: 326 RPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIICDLVANVTP 499 R +D+AL RPGRF ++ + +PD +GR+ I +H +K+ S++ D ++ +T Sbjct: 433 RLDLIDTALLRPGRFEIQIEISLPDEKGRKDIFLIHTKKLTENGILSSDVNFDELSTLTK 492 Query: 500 GLVGADLANIVNEAALLAARR 562 GA++ + N A A R Sbjct: 493 NFTGAEIEGLCNSAKSYAISR 513 Score = 41.2 bits (95), Expect = 0.003 Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 3/94 (3%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFS-VSASEFVEMFVGRGAARVRDLFKEAKEAAPS 178 +LL GPPG GKT +A +A + PF +SA V M R + ++F++ ++ + Sbjct: 596 ILLYGPPGVGKTSIATTLALNSDFPFIKMLSAETLVGMGELRKIQEIDNVFRDVHKSPLN 655 Query: 179 IIFIDELDAVGGSR--GRSFNDERDQTLNQLLTE 274 ++ ID+++ + G F+++ Q L LT+ Sbjct: 656 VLVIDKIENIINYNPIGPRFSNDILQVLMVYLTK 689
>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) Length = 742 Score = 108 bits (270), Expect = 1e-23 Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 15/219 (6%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEA-GIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 178 +LL GPPGTGKTL+A+ + G V+ E + FVG VRDLF +A++ + Sbjct: 253 MLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRT 312 Query: 179 --------IIFIDELDAVGGSRG--RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNR 328 +I DE+DA+ SRG R D +NQLLT++DG ++ V+++ TNR Sbjct: 313 LGDASELHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVEALNNVLLIGMTNR 372 Query: 329 PKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDL----VANVT 496 LD AL RPGR +V + +PD GR +IL +H K ++E+S + D+ +A T Sbjct: 373 KDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNK--MKENSFLGTDINLQELAART 430 Query: 497 PGLVGADLANIVNEAALLAARRGGDIVAREDIMDAIERE 613 GA+L +V A A R ++ +D+ +E E Sbjct: 431 KNYSGAELEGVVKSATSYALNRQ---LSMDDLTKPVEEE 466 Score = 43.5 bits (101), Expect = 5e-04 Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 3/117 (2%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFS-VSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 LL GP G+GKT LA + ++ P+ VSA + + A + +F++A ++ SI Sbjct: 534 LLEGPSGSGKTALAATIGIDSDFPYVKIVSAETMIGLSESTKCAHIVKVFEDAYKSPMSI 593 Query: 182 IFIDELDAVGG--SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDS 346 I +D+++ + + G F++ QTL LL + K++V T+ L+S Sbjct: 594 IILDDIERLLEFIAIGPRFSNIISQTLMVLLKRLP--PKGKKLLVFGTTSEVTFLES 648
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 105 bits (262), Expect = 1e-22 Identities = 80/236 (33%), Positives = 121/236 (51%), Gaps = 35/236 (14%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAK- 163 +LL GPPGTGKTL+A+ + A E I V+ E + +VG +R+LFK+A+ Sbjct: 277 LLLYGPPGTGKTLIARKIGTMLNAKEPKI----VNGPEILSKYVGSSEENIRNLFKDAEA 332 Query: 164 -------EAAPSIIFIDELDAV---GGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVM 313 E++ II DELD+V GSRG D +NQLL +MDG D ++V+ Sbjct: 333 EYRAKGEESSLHIIIFDELDSVFKQRGSRGDG-TGVGDNVVNQLLAKMDGVDQLNNILVI 391 Query: 314 AATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKV---PLEEDSEIICDLV 484 TNR +DSAL RPGRF +V + +PD +GR +I + +K+ + D + +L Sbjct: 392 GMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKMRENNMMSDDVNLAELA 451 Query: 485 ANVTPGLVGADLANIVNEAALLAARRGGDI----------------VAREDIMDAI 604 A +T GA++ +V A+ A + +I V RED ++A+ Sbjct: 452 A-LTKNFSGAEIEGLVKSASSFAINKTVNIGKGATKLNTKDIAKLKVTREDFLNAL 506 Score = 42.0 bits (97), Expect = 0.002 Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFS-VSASEFVEMFVGRGAARVRDLFKEAKEAAPS 178 +L+ GP G+GKT LA +A ++G PF +S +E M A + + F++A ++ + Sbjct: 560 LLIHGPAGSGKTALAAEIALKSGFPFIRLISPNELSGMSESAKIAYIDNTFRDAYKSPLN 619 Query: 179 IIFIDELDAV 208 I+ ID L+ + Sbjct: 620 ILVIDSLETL 629
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 103 bits (258), Expect = 3e-22 Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 19/206 (9%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKE 166 +LL GPPGTGKTL+A+ + A E I V+ + ++ +VG A VR LF EA+E Sbjct: 256 ILLYGPPGTGKTLMARQIGTMLNAREPKI----VNGPQILDKYVGESEANVRRLFAEAEE 311 Query: 167 --------AAPSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIVMA 316 + II DE+DA+ RG + D +NQLLT++DG D ++V+ Sbjct: 312 EEKRLGPNSGLHIIIFDEIDAICKQRGSVAGNSGVHDTVVNQLLTKIDGVDQLNNILVIG 371 Query: 317 ATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDL----V 484 TNR +D AL RPGR ++ + +P+ +GR +IL +H ++ + E ++I D+ + Sbjct: 372 MTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKR--MREFNKINDDVDNKEI 429 Query: 485 ANVTPGLVGADLANIVNEAALLAARR 562 A +T GA+L +V A A R Sbjct: 430 AALTKNFSGAELEGLVRAAQSSAMNR 455 Score = 40.4 bits (93), Expect = 0.004 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 3/117 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSV-SASEFVEMFVGRGAARVRDLFKEAKEAAPS 178 VL+AG P +GKT LA +A + PF V S + V +R +F +A + S Sbjct: 539 VLVAGAPNSGKTALAAQLAKMSDFPFVKVCSPEDMVGYTESAKCLHIRKIFDDAYRSMLS 598 Query: 179 IIFIDELDAV--GGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 343 I +D ++ + GS G +++ Q L LL + K++++ ++R + L+ Sbjct: 599 CIVVDNVERLLDYGSIGPRYSNMTLQALLVLLKKQP--PKGRKLLILCTSSRREVLE 653
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 103 bits (257), Expect = 4e-22 Identities = 69/204 (33%), Positives = 106/204 (51%), Gaps = 17/204 (8%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKE 166 +LL GPPG GKTLLA+ + A E + V+ E + +VG A +R LF +A+E Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGESEANIRKLFADAEE 311 Query: 167 --------AAPSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIVMA 316 + II DE+DA+ RG D +NQLL+++DG + ++V+ Sbjct: 312 EQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIG 371 Query: 317 ATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIICDLVAN 490 TNRP +D AL RPGR K+ +G+PD +GR +IL +H ++ + +++ +A Sbjct: 372 MTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAV 431 Query: 491 VTPGLVGADLANIVNEAALLAARR 562 T GA+L +V A A R Sbjct: 432 ETKNFSGAELEGLVRAAQSTAMNR 455 Score = 38.5 bits (88), Expect = 0.017 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSV-SASEFVEMFVGRGAARVRDLFKEAKEAAPS 178 VLL GPP +GKT +A +A E+ PF + S + + ++ +F +A ++ S Sbjct: 539 VLLEGPPHSGKTAVAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 179 IIFIDELD 202 + +D+++ Sbjct: 599 CVVVDDIE 606
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 103 bits (257), Expect = 4e-22 Identities = 69/204 (33%), Positives = 106/204 (51%), Gaps = 17/204 (8%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKE 166 +LL GPPG GKTLLA+ + A E + V+ E + +VG A +R LF +A+E Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGESEANIRKLFADAEE 311 Query: 167 --------AAPSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIVMA 316 + II DE+DA+ RG D +NQLL+++DG + ++V+ Sbjct: 312 EQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIG 371 Query: 317 ATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIICDLVAN 490 TNRP +D AL RPGR K+ +G+PD +GR +IL +H ++ + +++ +A Sbjct: 372 MTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAV 431 Query: 491 VTPGLVGADLANIVNEAALLAARR 562 T GA+L +V A A R Sbjct: 432 ETKNFSGAELEGLVRAAQSTAMNR 455 Score = 39.7 bits (91), Expect = 0.008 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSV-SASEFVEMFVGRGAARVRDLFKEAKEAAPS 178 VLL GPP +GKT LA +A E+ PF + S + + ++ +F +A ++ S Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 179 IIFIDELD 202 + +D+++ Sbjct: 599 CVVVDDIE 606
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 103 bits (257), Expect = 4e-22 Identities = 69/204 (33%), Positives = 106/204 (51%), Gaps = 17/204 (8%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKE 166 +LL GPPG GKTLLA+ + A E + V+ E + +VG A +R LF +A+E Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGESEANIRKLFADAEE 311 Query: 167 --------AAPSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIVMA 316 + II DE+DA+ RG D +NQLL+++DG + ++V+ Sbjct: 312 EQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIG 371 Query: 317 ATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIICDLVAN 490 TNRP +D AL RPGR K+ +G+PD +GR +IL +H ++ + +++ +A Sbjct: 372 MTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAV 431 Query: 491 VTPGLVGADLANIVNEAALLAARR 562 T GA+L +V A A R Sbjct: 432 ETKNFSGAELEGLVRAAQSTAMNR 455 Score = 39.7 bits (91), Expect = 0.008 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSV-SASEFVEMFVGRGAARVRDLFKEAKEAAPS 178 VLL GPP +GKT LA +A E+ PF + S + + ++ +F +A ++ S Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 179 IIFIDELD 202 + +D+++ Sbjct: 599 CVVVDDIE 606
>MSP1_CAEEL (P54815) Protein MSP1 homolog| Length = 342 Score = 103 bits (257), Expect = 4e-22 Identities = 68/187 (36%), Positives = 101/187 (54%), Gaps = 1/187 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL GPPG GKTLLAKAVA AG F ++ S + + G +F A++ P+I Sbjct: 120 ILLYGPPGCGKTLLAKAVARAAGCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTI 179 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDSD-VKVIVMAATNRPKALDSALCR 358 IFIDE+D+ R ++ Q +T DGF S ++IVM ATNRP+ +D+A+ R Sbjct: 180 IFIDEIDSFLRDRQSHDHESTAMMKAQFMTLWDGFSSSGDQIIVMGATNRPRDVDAAILR 239 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 538 R + + V VP+ + R +IL V LR + ++ + +A GL G+DL + Sbjct: 240 --RMTARFQVPVPNAKQRSQILNVILRNEKI--NNTVNLGEIAQAAEGLSGSDLKEVCRL 295 Query: 539 AALLAAR 559 A L A+ Sbjct: 296 ALLARAK 302
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 100 bits (250), Expect = 3e-21 Identities = 72/222 (32%), Positives = 112/222 (50%), Gaps = 21/222 (9%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKE 166 +LL GPPGTGKTL+A+ + A E I V+ + ++ +VG + VR LF +A+E Sbjct: 333 ILLFGPPGTGKTLMARQIGKMLNAREPKI----VNGPQILDKYVGESESNVRKLFADAEE 388 Query: 167 --------AAPSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIVMA 316 + II DE+DA+ RG D +NQLL++MDG + ++V+ Sbjct: 389 EWRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVHDTVVNQLLSKMDGVEQLNNILVIG 448 Query: 317 ATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVP--LEEDSEIICDLVAN 490 TNR +D AL RPGR ++ V +PD GR +IL +H ++ + D + + ++ Sbjct: 449 MTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDISK 508 Query: 491 VTPGLVGADLANIVNEAALLAARR----GGDIVAREDIMDAI 604 T GA+L +V A A R GG A D ++ + Sbjct: 509 RTKNFSGAELEGLVRAAQSSAMNRLVKAGGKAQADPDAIEKL 550 Score = 37.0 bits (84), Expect = 0.049 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSV-SASEFVEMFVGRGAARVRDLFKEAKEAAPS 178 V+LAG TGKT LA +A + PF V S + V ++ F++AK + S Sbjct: 616 VVLAGAAKTGKTSLAAQMAKSSDFPFVKVISPEDTVGFSESAKCMALKKAFEDAKRSKLS 675 Query: 179 IIFIDELD 202 ++ ID L+ Sbjct: 676 VLLIDNLE 683
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 100 bits (248), Expect = 5e-21 Identities = 68/206 (33%), Positives = 110/206 (53%), Gaps = 19/206 (9%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAV-----AGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKE 166 +LL GPPGTGKTL+A+ + A E I V+ + ++ +VG A +R LF EA+E Sbjct: 261 ILLYGPPGTGKTLMARQIGTMLNAREPKI----VNGPQILDKYVGESEANIRRLFAEAEE 316 Query: 167 --------AAPSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSDVKVIVMA 316 + II DE+DA+ +RG + D +NQLL ++DG + ++V+ Sbjct: 317 EEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNILVIG 376 Query: 317 ATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDL----V 484 TNR +D AL RPGR ++ + +P+ +GR +IL +H ++ + + ++I D+ + Sbjct: 377 MTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKR--MRDFNKIASDVDNNEI 434 Query: 485 ANVTPGLVGADLANIVNEAALLAARR 562 A T GA+L +V A A R Sbjct: 435 AAKTKNFSGAELEGLVRAAQSTAMNR 460 Score = 34.3 bits (77), Expect = 0.32 Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 3/117 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSV-SASEFVEMFVGRGAARVRDLFKEAKEAAPS 178 VL+ G P +GK+ LA +A + PF V S + V +R +F +A + S Sbjct: 544 VLIEGAPNSGKSALAANLAQLSDFPFVKVCSPEDMVGFTESAKCLHIRKIFDDAYRSTLS 603 Query: 179 IIFIDELDAV--GGSRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 343 I +D ++ + G G +++ Q L LL + K++++ ++R L+ Sbjct: 604 CIVVDNVERLLDYGPIGPRYSNLTLQALLVLLKKQP--PKGRKLLILCTSSRRDVLE 658
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 99.0 bits (245), Expect = 1e-20 Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 21/174 (12%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAG---------------EAGIPFFSVSASEFVEMFVGRGAAR 136 VLL GPPG GKTL+AKAVA EA F ++ E + FVG Sbjct: 289 VLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERH 348 Query: 137 VRDLFKEAKEAA----PSIIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGFDSDVK 301 +R +F+ A+E A P I+F DE+D++ +RG + + + T+ QLL+E+DG + Sbjct: 349 IRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQLLSEIDGVEGLEN 408 Query: 302 VIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRK-VPLEED 460 VIV+ A+NR +D A+ RPGR K+ + PD E + I + +L + +P+ D Sbjct: 409 VIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTEFLPVHAD 462
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 99.0 bits (245), Expect = 1e-20 Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 21/174 (12%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAG---------------EAGIPFFSVSASEFVEMFVGRGAAR 136 VLL GPPG GKTL+AKAVA EA F ++ E + FVG Sbjct: 289 VLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERH 348 Query: 137 VRDLFKEAKEAA----PSIIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGFDSDVK 301 +R +F+ A+E A P I+F DE+D++ +RG + + + T+ QLL+E+DG + Sbjct: 349 IRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQLLSEIDGVEGLEN 408 Query: 302 VIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRK-VPLEED 460 VIV+ A+NR +D A+ RPGR K+ + PD E + I + +L + +P+ D Sbjct: 409 VIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTEFLPVHAD 462
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 99.0 bits (245), Expect = 1e-20 Identities = 63/174 (36%), Positives = 94/174 (54%), Gaps = 21/174 (12%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAG---------------EAGIPFFSVSASEFVEMFVGRGAAR 136 VLL GPPG GKTL+AKAVA EA F ++ E + FVG Sbjct: 289 VLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAREAKSYFLNIKGPELLNKFVGETERH 348 Query: 137 VRDLFKEAKEAA----PSIIFIDELDAVGGSRGRSFNDERDQTL-NQLLTEMDGFDSDVK 301 +R +F+ A+E A P I+F DE+D++ +RG + + + T+ QLL+E+DG + Sbjct: 349 IRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQLLSEIDGVEGLEN 408 Query: 302 VIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHL-RKVPLEED 460 VIV+ A+NR +D A+ RPGR K+ + PD E + I + +L +P+ D Sbjct: 409 VIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTESLPVHAD 462
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 93.6 bits (231), Expect = 4e-19 Identities = 63/188 (33%), Positives = 99/188 (52%), Gaps = 2/188 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 VLL GPPG GKTL+AKA A +G F ++ AS + + G +F A + P I Sbjct: 132 VLLYGPPGCGKTLIAKATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCI 191 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDS--DVKVIVMAATNRPKALDSALC 355 IF+DE+D+ +R ++ Q ++ DG D+ + +V+VM ATNRP+ +D+A+ Sbjct: 192 IFLDEIDSFLRNRSSMDHEATAMMKAQFMSLWDGLDTGENSQVMVMGATNRPQDVDAAIL 251 Query: 356 RPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVN 535 R R VG+P+ R +IL + L L + I +A+ + G G+DL + Sbjct: 252 R--RMPTAFHVGLPNAAQREEILRLILSGENL--SNAINLKEIASQSEGYSGSDLKELCR 307 Query: 536 EAALLAAR 559 +AA+ R Sbjct: 308 DAAMYRVR 315
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 92.8 bits (229), Expect = 8e-19 Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 1/204 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL G GTGK+L AK++A E +P + +G ARVR + + A+ +P I Sbjct: 278 LLLVGIQGTGKSLTAKSIANEWNLPLLKLDVGRLFGGIIGESEARVRQMIQFAETISPCI 337 Query: 182 IFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGF-DSDVKVIVMAATNRPKALDSALCR 358 ++IDE+D G +FN++ T T + + V V+A N +L L R Sbjct: 338 LWIDEIDK--AFTGSNFNNDSGTTKRVFGTFITWLSEKKSPVFVVATANNIDSLPPELLR 395 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNE 538 GRF F+G+PDL+ R I VHL+K+ + S ++++ + GA++ + E Sbjct: 396 KGRFDEVFFIGLPDLKERECIFKVHLKKIRPKSWSTYDTEILSAQSNRFSGAEIEESIYE 455 Query: 539 AALLAARRGGDIVAREDIMDAIER 610 A +A + DI+++++R Sbjct: 456 AMHIAFNENREFTT-SDILNSLKR 478
>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL| Length = 330 Score = 79.3 bits (194), Expect = 9e-15 Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 1/154 (0%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +L GPPG GKTL A+ A E G+P F V + ++G A +R F+ A++ P + Sbjct: 121 MLFCGPPGCGKTLCAEIFAAELGLPLFRVKLDRLISSYLGETATNIRKTFEFARK-QPCV 179 Query: 182 IFIDELDAVGGSRGRS-FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 358 +F DE DA+ +R S ++E + +N LL +D K ++AATN ++LD+A+ R Sbjct: 180 LFFDEFDALARTRDDSGEHNELRRVVNSLLLFIDNMQP--KGFLIAATNLDRSLDAAIWR 237 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEED 460 RF ++ P+ + L + + VP+ D Sbjct: 238 --RFDEVLWFDRPEAAMIGRFLKLKFKNVPVAFD 269
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 77.0 bits (188), Expect = 4e-14 Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 4/184 (2%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL G GTGK+L AKA+A E +P + VG +R+R + A+ +P I Sbjct: 262 LLLIGIQGTGKSLTAKAIATEWQLPLLKLDVGRLFGGIVGESESRLRQMIDVAETLSPCI 321 Query: 182 IFIDELDAVGGSRGRSFNDERDQ--TLNQLLTEMDGFDSD--VKVIVMAATNRPKALDSA 349 ++IDE+D + S ND R T N++L + S+ V V+A N L Sbjct: 322 LWIDEMD-----KAFSNNDSRGDSGTSNRVLATFISWLSEKTKPVFVVATANNVDLLPLE 376 Query: 350 LCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANI 529 + R GRF F+ +P+LE R++I +H+++ +A ++ GA++ Sbjct: 377 IIRKGRFDEIFFLDLPELEERKEIFKIHIQEFRPNSWKLFDYKKLAQLSESFSGAEIRQS 436 Query: 530 VNEA 541 + EA Sbjct: 437 IIEA 440
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 71.6 bits (174), Expect = 2e-12 Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 1/98 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAA-RVRDLFKEAKEAAPS 178 +LL GPPGTGKTLL +A+AGEA +P +S S +E G AA +++ +F+EA++ AP Sbjct: 1010 ILLTGPPGTGKTLLVQALAGEAQVPVIVLSGSSLME--PGESAAFKLQLVFQEARQLAPC 1067 Query: 179 IIFIDELDAVGGSRGRSFNDERDQTLNQLLTEMDGFDS 292 I+FIDE+D + + +R Q L + GF+S Sbjct: 1068 IVFIDEID--------TLSSKRSQLLQNPMANDPGFES 1097 Score = 68.6 bits (166), Expect = 2e-11 Identities = 41/107 (38%), Positives = 62/107 (57%) Frame = +2 Query: 233 NDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGR 412 N+++ L+QLL E+DG V++ ATNRP+ LD AL RPGRF + V VG+P + R Sbjct: 1148 NEKQVSLLSQLLIELDGIQGRNGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQKKR 1207 Query: 413 RKILAVHLRKVPLEEDSEIICDLVANVTPGLVGADLANIVNEAALLA 553 +IL + + + ++ + T G ADLA ++NE+AL A Sbjct: 1208 VEILQFYGQTLGYQK--TMPWAYFGERTVGFTAADLATLMNESALKA 1252
>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)| Length = 491 Score = 69.3 bits (168), Expect = 9e-12 Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 3/151 (1%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSI 181 +LL G GTGK+L AKA+A + +P + + VG +R+R++ A+ +P + Sbjct: 262 LLLVGIQGTGKSLTAKAIANDWTLPLLRLDIGKLFGGLVGESESRMREMVTIAEGLSPCV 321 Query: 182 IFIDELDAVGG---SRGRSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 ++IDE+D S+G S R +T + + V V+A N + L S + Sbjct: 322 LWIDEIDKAFSNLYSQGDSGTSAR--VFGTFITWLS--EKTTPVFVVATANTIQNLPSEM 377 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKV 445 R GRF F+ +P+ E R I +HL ++ Sbjct: 378 LRKGRFDEIFFLDLPNNEERELIFQIHLARI 408
>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1| Length = 456 Score = 67.0 bits (162), Expect = 4e-11 Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 4/133 (3%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEA--GIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 178 LL GPPG+GKT +A+AGE I ++S + + R+ L E S Sbjct: 264 LLYGPPGSGKTSFIQALAGELDYNICILNLSENNLTD-------DRLNHLMNNMPER--S 314 Query: 179 IIFIDELDAVGGSRGRSFND--ERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 I+ ++++DA R ++ T + LL +DG S + I TN P+ LD+A+ Sbjct: 315 ILLLEDIDAAFNKRSQTGEQGFHSSVTFSGLLNALDGVTSSEETITFMTTNHPEKLDAAI 374 Query: 353 CRPGRFSRKVFVG 391 RPGR KVFVG Sbjct: 375 MRPGRIDYKVFVG 387
>ATD3B_HUMAN (Q5T9A4) ATPase family AAA domain-containing protein 3B| Length = 648 Score = 63.9 bits (154), Expect = 4e-10 Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 17/217 (7%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGR-GAARVRDLFKEAKEAAPS 178 +LL GPPGTGKTL AK +A +G+ + ++ + M GR G + LF A + Sbjct: 348 ILLYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM--GREGVTAMHKLFDWANTSRRG 405 Query: 179 -IIFIDELDAVGGSRG-RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 ++F+DE DA R + + TLN L M + K +++ A+N P+ D A+ Sbjct: 406 LLLFMDEADAFLRKRATEEISKDLRATLNAFLYHMGQHSN--KFMLVLASNLPEQFDCAI 463 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHL------------RKVPLEE-DSEIICDLVANV 493 R V +P E R +++ +H R++ L + D C VA + Sbjct: 464 --NSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARL 521 Query: 494 TPGLVGADLANI-VNEAALLAARRGGDIVAREDIMDA 601 T G+ G ++A + V+ A A + G V E +MDA Sbjct: 522 TEGMSGREIAQLAVSWQATAYASKDG--VLTEAMMDA 556
>AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)| Length = 69 Score = 63.9 bits (154), Expect = 4e-10 Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 2/69 (2%) Frame = +2 Query: 302 VIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEE--DSEIIC 475 V+V+A TNRP LD AL RPGRF R+++ G P ++GR I VHLR + L++ + + + Sbjct: 1 VVVLAGTNRPDVLDPALMRPGRFHRQIYTGPPYIKGRSSIFKVHLRPLKLDKSLNKDTLA 60 Query: 476 DLVANVTPG 502 +A +TPG Sbjct: 61 RKLAVLTPG 69
>ATAD3_MOUSE (Q925I1) ATPase family AAA domain-containing protein 3 (AAA-ATPase| TOB3) Length = 591 Score = 63.2 bits (152), Expect = 6e-10 Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 16/216 (7%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGR-GAARVRDLFKEAKEAAPS 178 VL+ GPPGTGKTL AK +A +G+ + ++ + M GR G + +F A + Sbjct: 347 VLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM--GREGVTAMHKVFDWASTSRRG 404 Query: 179 -IIFIDELDAVGGSRG-RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 ++F+DE DA R +++ TLN L S K +++ A+N+P+ D A+ Sbjct: 405 LLLFVDEADAFLRKRATEKISEDLRATLNAFLHRTGQHSS--KFMLVLASNQPEQFDWAI 462 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSE-------------IICDLVANV 493 R V +P E R +++ ++ K L+ +E C VA + Sbjct: 463 --NDRIDEMVCFALPQREERERLVRMYFDKYVLKPATEGKQRLKVAQFDYGKKCSEVAQL 520 Query: 494 TPGLVGADLANIVNEAALLAARRGGDIVAREDIMDA 601 T G+ G ++A + A A D V E +MDA Sbjct: 521 TEGMSGREIAQLA-VAWQAMAYSSEDGVLTEAMMDA 555
>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 449 Score = 62.0 bits (149), Expect = 1e-09 Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 4/161 (2%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 LL GPPG+GKT A+AGE ++ +E G R+ L A ++ Sbjct: 246 LLYGPPGSGKTSFLYALAGELDYDICVLNLAE-----KGLTDDRLNHLLSNVPPKA--VV 298 Query: 185 FIDELDAVGGSRGRS--FNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSALCR 358 ++++D+ R RS + T + LL +DG S + I+ TN P+ LD AL R Sbjct: 299 LLEDVDSAFQGRERSGEVGFHANVTFSGLLNALDGVTSSDERIIFMTTNHPEKLDPALVR 358 Query: 359 PGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEED--SEIIC 475 PGR K ++G E R++ P D S+I+C Sbjct: 359 PGRVDVKAYLGNATPEQVREMFTRFYGHSPEMADDLSDIVC 399
>ATD3A_HUMAN (Q9NVI7) ATPase family AAA domain-containing protein 3A| Length = 634 Score = 61.2 bits (147), Expect = 2e-09 Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 17/216 (7%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGR-GAARVRDLFKEAKEAAPS 178 +L+ GPPGTGKTL AK +A +G+ + ++ + M GR G + LF A + Sbjct: 396 ILMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM--GREGVTAMHKLFDWANTSRRG 453 Query: 179 -IIFIDELDAVGGSRG-RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALDSAL 352 ++F+DE DA R +++ TLN L + K +++ A+N+P+ D A+ Sbjct: 454 LLLFVDEADAFLRKRATEKISEDLRATLNAFLYRTGQHSN--KFMLVLASNQPEQFDWAI 511 Query: 353 CRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSE-------------IICDLVANV 493 R + V +P E R +++ ++ K L+ +E C VA + Sbjct: 512 --NDRINEMVHFDLPGQEERERLVRMYFDKYVLKPATEGKQRLKLAQFDYGRKCSEVARL 569 Query: 494 TPGLVGADLANI-VNEAALLAARRGGDIVAREDIMD 598 T G+ G ++A + V+ A A G V E +MD Sbjct: 570 TEGMSGREIAQLAVSWQATAYASEDG--VLTEAMMD 603
>YCF2_ANTFO (Q859W7) Protein ycf2| Length = 2392 Score = 60.1 bits (144), Expect = 5e-09 Identities = 53/225 (23%), Positives = 104/225 (46%), Gaps = 18/225 (8%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFV--------EMFVG---RGAARVRDL 148 +LL GP GK+ L K +A ++ +P +S S+ + E ++ R+ + Sbjct: 1654 ILLVGPTEIGKSYLIKNLAADSYVPLIKISISKLLYNKPDVITESWINILMESLQRLTLI 1713 Query: 149 FKEAKEAAPSIIFIDELDAVGGSRGRSFNDERDQT------LNQLLTEMDGFDSDVKVIV 310 + AK+ +P II+I ++ + +R N E D T L TE S +I+ Sbjct: 1714 LELAKKMSPCIIWIQDIHELNVNRSTE-NVESDPTFLLGILLKYFHTEFIS-KSTKGIII 1771 Query: 311 MAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEII-CDLVA 487 + +T+ P+ +D AL P R + + + + D+ R++ ++ L ++++ + A Sbjct: 1772 IGSTHLPRKVDPALISPNRLDKLMNIRIIDIFERQEKFSILLHSKRFYFKNKLLHFNEFA 1831 Query: 488 NVTPGLVGADLANIVNEAALLAARRGGDIVAREDIMDAIEREKYG 622 T G G DL + NE +L+ +G + + + A+ R+ G Sbjct: 1832 YRTMGYNGRDLVALANEVSLINTTQGNSTIYIDAVRLALHRQTLG 1876
>YCF2_MARPO (P09975) Protein ycf2| Length = 2136 Score = 59.3 bits (142), Expect = 9e-09 Identities = 56/225 (24%), Positives = 106/225 (47%), Gaps = 17/225 (7%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFV--------EMFVG---RGAARVRDL 148 +LL GP TG++ L K +A E+ +P F +S ++ + E ++ R+ Sbjct: 1400 ILLIGPIETGRSYLIKNLAAESYVPLFKISINKLLYNKPDVITESWMNILIESLRRLNLT 1459 Query: 149 FKEAKEAAPSIIFIDELDAVGGSRGRSFNDERDQT--LNQLLTEMDGFDSDVK---VIVM 313 AK+ +P II+I + + +R + N E D T L LL S K +IV+ Sbjct: 1460 LDFAKKMSPCIIWIQNIHQLNVNR-LTQNVESDPTFLLGILLKYFQTDFSKTKKNNIIVI 1518 Query: 314 AATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLE-EDSEIICDLVAN 490 +T+ PK +D AL P R + + V + ++ R+K + L+K + +++ + + Sbjct: 1519 GSTHLPKKVDPALISPNRLDKIINVRLFNISQRKKQFPLLLKKKNFQLKENLFFLNEFGS 1578 Query: 491 VTPGLVGADLANIVNEAALLAARRGGDIVAREDIMDAIEREKYGV 625 T G DL+ + NE L++ + + + + A R+ +G+ Sbjct: 1579 RTMGYNLRDLSALTNEVLLISITKNRSFIDTDTLKLAFHRQIFGL 1623
>YCF2_PINTH (P41653) Protein ycf2| Length = 2054 Score = 59.3 bits (142), Expect = 9e-09 Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 24/228 (10%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSA-----SEFVEMFVGRGAARVRDLFKE--- 157 +LL GP GTG++ L K++A ++ +P +S E+++ + R K+ Sbjct: 1373 ILLIGPMGTGRSYLVKSLAADSYVPLIRISLKKLWYGEYLDYPLERIPTEFDPFVKDKME 1432 Query: 158 --------AKEAAPSIIFIDEL------DAVGGSRGRSFND-ERDQTLNQLLTEMDG-FD 289 AK +P II+I + DA G F D +N L DG D Sbjct: 1433 DFHITLELAKRMSPCIIWIPNIHELNLNDATNYLFGFGFTDLFLSVLMNNLFRFRDGEKD 1492 Query: 290 SDVKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEI 469 S ++V+A+T+ P+ +D AL P R R + + + + R++ + L L S Sbjct: 1493 SMRNILVIASTHIPQRVDPALIAPNRLDRSINIRMLVIPQRQREFPILLCSKGLY--SVK 1550 Query: 470 ICDLVANVTPGLVGADLANIVNEAALLAARRGGDIVAREDIMDAIERE 613 D ++T DLA + +EA +L+ R ++ I AI R+ Sbjct: 1551 FPDEFGSITIDYAVRDLAALADEALILSITRNKSVIDTNTIRSAIYRQ 1598
>YCF2_PINKO (Q85WV5) Protein ycf2| Length = 1320 Score = 57.8 bits (138), Expect = 3e-08 Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 24/225 (10%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFV--EMFVGRGAARV--------RD-- 145 +LL GP GTG++ L K++A ++ +P +S + + + R+ RD Sbjct: 626 ILLIGPMGTGRSYLIKSLAADSYVPLIRISLKKLLYGKFLYYPDPGRIPTEFNTFWRDTI 685 Query: 146 -----LFKEAKEAAPSIIFIDEL------DAVGGSRGRSFNDERDQTLNQLLTEMDGFDS 292 F+ AK +P II+I + D + G F D L ++ DS Sbjct: 686 DHFHITFELAKRMSPCIIWIPNIHELNVNDTITHLFGLGFTDSFLGLLLNYISRGGEKDS 745 Query: 293 DVKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSEII 472 ++ +A+T+ P+ +D AL P R + + + + R++ + L L + E+ Sbjct: 746 IRNILFIASTHIPQRVDPALIAPNRLDSSINIRMLVIPQRQREFPILLCSKGLYSEKEVS 805 Query: 473 C-DLVANVTPGLVGADLANIVNEAALLAARRGGDIVAREDIMDAI 604 C D ++T DLA + NEA + + R ++ I AI Sbjct: 806 CPDEFGSITIDSDARDLAALANEALITSITRKKSVIDTNTIRYAI 850
>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 420 Score = 54.7 bits (130), Expect = 2e-07 Identities = 46/136 (33%), Positives = 62/136 (45%), Gaps = 7/136 (5%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPSII 184 LL GPPG GK+ A+AGE G +S S+ R+ L A + SII Sbjct: 227 LLYGPPGCGKSSFITALAGELGYSICLMSLSDR-----SLSDDRLNHLLSVAPQQ--SII 279 Query: 185 FIDELDAVGGSRGR-------SFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKALD 343 ++++DA SR ++ T + LL +DG S IV TN + LD Sbjct: 280 LLEDVDAAFVSRELLPTENPLAYQGMGRLTFSGLLNALDGVASSEARIVFMTTNFIERLD 339 Query: 344 SALCRPGRFSRKVFVG 391 AL RPGR K +VG Sbjct: 340 PALVRPGRVDLKQYVG 355
>YCF2_ADICA (Q85B60) Protein ycf2| Length = 2104 Score = 53.5 bits (127), Expect = 5e-07 Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 18/222 (8%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFV----------EMFVGRGAA-RVRDL 148 +LL GP TG++ L + VA + P + +F+ F+ + + R+ + Sbjct: 1392 ILLVGPVETGRSSLIRDVASNSYFPVVKLPLKKFIYNRSFFNNVRGNFISKESVHRLNIV 1451 Query: 149 FKEAKEAAPSIIFIDELDAVGGSRGRSFND-ERDQ--TLNQLLTEMDG--FDSDVKV-IV 310 F+ AKE +P ++I ++ + + RS+N E D L Q+L + +SD++ +V Sbjct: 1452 FEIAKEMSPCTLWIQDIHEL--NICRSYNKLEADPKFLLCQILKSIGHKLGNSDIRENVV 1509 Query: 311 MAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLEEDSE-IICDLVA 487 +A T+ P +D AL P R ++ + + R+K L++ LR E + + + Sbjct: 1510 IATTHVPARIDPALVAPNRLNQLINFRRSNGRQRQKELSILLRIKGFEVGANPTLLESTV 1569 Query: 488 NVTPGLVGADLANIVNEAALLAARRGGDIVAREDIMDAIERE 613 + T G DL + NEA L+ +G V I A+ R+ Sbjct: 1570 SGTAGYSKRDLLLLANEALLIGTSKGRKFVCSNTIGLALHRQ 1611
>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 419 Score = 53.1 bits (126), Expect = 7e-07 Identities = 45/137 (32%), Positives = 60/137 (43%), Gaps = 8/137 (5%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAP--S 178 LL GPPG GK+ A+AGE +S S+ ++ D AP S Sbjct: 227 LLYGPPGCGKSSFITALAGELEYSICLMSLSD---------SSLSDDRLNHLLSVAPQQS 277 Query: 179 IIFIDELDAVGGSRG------RSFNDERDQTLNQLLTEMDGFDSDVKVIVMAATNRPKAL 340 II ++++DA SR ++ T + LL +DG S IV TN L Sbjct: 278 IILLEDVDAAFVSRDLNKQNPTAYQGMGRLTFSGLLNALDGVASTEARIVFMTTNHIDRL 337 Query: 341 DSALCRPGRFSRKVFVG 391 D AL RPGR K +VG Sbjct: 338 DPALIRPGRVDVKQYVG 354
>YCF2_PHYPA (P61243) Protein ycf2| Length = 2259 Score = 52.0 bits (123), Expect = 1e-06 Identities = 51/227 (22%), Positives = 101/227 (44%), Gaps = 20/227 (8%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFV--------EMFVG---RGAARVRDL 148 +LL G TG++ L K +A + IP +S ++ + E ++ R+ + Sbjct: 1552 ILLIGSQETGRSYLVKNLAANSFIPLIKISINKLLYNKPDILTESWINILMESLRRLNLI 1611 Query: 149 FKEAKEAAPSIIFIDELDAVGGSRGRSFNDERDQTLNQ---LLTEMDGFD--SDVKVIVM 313 + A++ +P II++ + + +R N E D T L GF + +I++ Sbjct: 1612 LELAEKLSPCIIWMPNIHELNVNRSTQ-NVESDPTFLLGIFLKYFQTGFSKKNTNNIIII 1670 Query: 314 AATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHL----RKVPLEEDSEIICDL 481 +T+ PK +D AL P R R + + ++ R+K +++ L K + + + Sbjct: 1671 GSTHLPKKVDPALISPNRLDRLINIRTFNILQRQKKISILLYSKYSKYFYSKKKKSSLNE 1730 Query: 482 VANVTPGLVGADLANIVNEAALLAARRGGDIVAREDIMDAIEREKYG 622 + T G DLA ++NE L++ + + ++ I A R+ G Sbjct: 1731 FGSRTIGYNARDLAGLINEILLISINQNQSTIQKKTIRLAFHRQTLG 1777
>PCH2_YEAST (P38126) Pachytene checkpoint protein 2| Length = 536 Score = 52.0 bits (123), Expect = 1e-06 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 29/181 (16%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIP-----------------FFSVSASEFVEMFVGRGA 130 +L+ GPPGTGKT L KA+ + + +S + + G + Sbjct: 310 LLVHGPPGTGKTTLCKALCQKLSVRREFSDGSDTIDTNYKGIIIELSCARIFSKWFGESS 369 Query: 131 ARVRDLFKEAKEAAP--------SIIFIDELDAVGGSRGR--SFNDERD--QTLNQLLTE 274 + +FK+ +E + IDE++A+ SR S N+ D + +N LLT+ Sbjct: 370 KNISIVFKDIEELLKVNEGRGIFICLLIDEVEAIASSRTNLSSRNESTDGIRVVNTLLTQ 429 Query: 275 MDGFDSDVKVIVMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKILAVHLRKVPLE 454 +D + +A +N +LD A R +VG P EG +H+ KV +E Sbjct: 430 LDRLKKYHNFLALATSNLLDSLDDAFV--DRADGVFYVGNPTAEG-----ILHILKVCIE 482 Query: 455 E 457 E Sbjct: 483 E 483
>PCH2_CAEEL (Q09535) Putative pachytene checkpoint protein 2| Length = 424 Score = 51.6 bits (122), Expect = 2e-06 Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 21/180 (11%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGI---------PFFSVSASEFVEMFVGRGAARVRDLFK 154 +LL GPPGTGKT L K +A I +++ + V+ +F Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQKMFD 234 Query: 155 EAKEAAPS-----IIFIDELDAVG----GSRGRSFNDERDQTLNQLLTEMDGFDSDVKVI 307 + E A + IDE++++G S RS + + +N LLT++D V+ Sbjct: 235 QIDELAEDEKCMVFVLIDEVESLGMCRESSSSRSEPSDAIRAVNALLTQIDRIRRRDNVL 294 Query: 308 VMAATNRPKALDSALCRPGRFSRKVFVGVPDLEGRRKIL---AVHLRKVPLEEDSEIICD 478 ++ +N LD AL + VG P R +L + L ++ + D+E+ D Sbjct: 295 ILCTSNLESTLDKALVDRADIVKN--VGQPSDFARYSMLKSSIMELARIGVVIDNEVHTD 352
>BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like protein) (H-BCS1)| Length = 419 Score = 51.2 bits (121), Expect = 3e-06 Identities = 46/137 (33%), Positives = 64/137 (46%), Gaps = 8/137 (5%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEA--GIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 178 LL GPPG GK+ A+AGE I S++ S + R+ L A + S Sbjct: 227 LLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSD-------DRLNHLLSVAPQQ--S 277 Query: 179 IIFIDELDAVGGSRGRSF-NDERDQ-----TLNQLLTEMDGFDSDVKVIVMAATNRPKAL 340 ++ ++++DA SR + N + Q T + LL +DG S IV TN L Sbjct: 278 LVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGVASTEARIVFMTTNHVDRL 337 Query: 341 DSALCRPGRFSRKVFVG 391 D AL RPGR K +VG Sbjct: 338 DPALIRPGRVDLKEYVG 354
>CLPX_TREDE (Q73M37) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 415 Score = 49.7 bits (117), Expect = 7e-06 Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 6/75 (8%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEM-FVGRGAAR-----VRDLFKEAK 163 VLL GP G+GKTLLAK +A + +PF A+ E +VG +++ + K Sbjct: 112 VLLLGPTGSGKTLLAKTLAQKMQVPFAIADATTLTEAGYVGEDVENILLKLIQNANGDIK 171 Query: 164 EAAPSIIFIDELDAV 208 EA IIFIDE+D + Sbjct: 172 EAEMGIIFIDEIDKI 186
>BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 418 Score = 49.7 bits (117), Expect = 7e-06 Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 8/137 (5%) Frame = +2 Query: 5 LLAGPPGTGKTLLAKAVAGEA--GIPFFSVSASEFVEMFVGRGAARVRDLFKEAKEAAPS 178 LL GPPG GK+ A+AGE I S++ S + R+ L A + S Sbjct: 227 LLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSD-------DRLNHLLSVAPQQ--S 277 Query: 179 IIFIDELDAVGGSRGRSFNDERDQ------TLNQLLTEMDGFDSDVKVIVMAATNRPKAL 340 ++ ++++DA SR + + T + LL +DG S IV TN L Sbjct: 278 LVLLEDVDAAFLSRDLAVENPIKYQGLGRLTFSGLLNALDGVASTEARIVFMTTNYIDRL 337 Query: 341 DSALCRPGRFSRKVFVG 391 D AL RPGR K +VG Sbjct: 338 DPALIRPGRVDLKEYVG 354
>CLPX2_WOLSU (Q7M8U5) ATP-dependent Clp protease ATP-binding subunit clpX 2| Length = 397 Score = 47.8 bits (112), Expect = 3e-05 Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 6/88 (6%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEM-FVGRGAARVRDLFKEA-----K 163 +LL GP G+GKTLLAK +A IPF A+ E +VG + A + Sbjct: 106 ILLLGPSGSGKTLLAKTLARVLNIPFAMSDATALTEAGYVGEDVESILSRLLHAASFDIE 165 Query: 164 EAAPSIIFIDELDAVGGSRGRSFNDERD 247 +A I++IDE+D + +G S RD Sbjct: 166 KAQKGIVYIDEIDKI-AKKGESVQSGRD 192
>CLPX_PORGI (Q7MX10) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 411 Score = 47.8 bits (112), Expect = 3e-05 Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 6/75 (8%) Frame = +2 Query: 2 VLLAGPPGTGKTLLAKAVAGEAGIPFFSVSASEFVEM-FVGRGAARVRDLFKEA-----K 163 +++ GP GTGKTLLA+ +A +PF V A+ E +VG + +A K Sbjct: 114 IIMVGPTGTGKTLLARTIAKMLHVPFAVVDATVLTEAGYVGEDIESILTRLLQAADYDVK 173 Query: 164 EAAPSIIFIDELDAV 208 +A I+FIDE+D + Sbjct: 174 QAERGIVFIDEIDKI 188 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,121,054 Number of Sequences: 219361 Number of extensions: 2024652 Number of successful extensions: 11037 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 9837 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10530 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
