ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd25b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK064852.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 1e-38
2gb|AY107119.1| Zea mays PCO095102 mRNA sequence 143 2e-31
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 94 2e-16
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 94 2e-16
5emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa... 94 2e-16
6emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa... 94 2e-16
7ref|NM_180215.2| Arabidopsis thaliana unknown protein AT3G09470 ... 48 0.009
8ref|NM_111781.2| Arabidopsis thaliana unknown protein AT3G09470 ... 48 0.009
9gb|AC125368.7| Medicago truncatula clone mth2-13h15, complete se... 48 0.009
10gb|AC135797.13| Medicago truncatula clone mth2-11f7, complete se... 48 0.009
11gb|AY049250.1| Arabidopsis thaliana AT3g09470/F11F8_4 mRNA, comp... 48 0.009
12emb|BX822565.1|CNS0A79N Arabidopsis thaliana Full-length cDNA Co... 48 0.009
13emb|BX823407.1|CNS0A6L4 Arabidopsis thaliana Full-length cDNA Co... 48 0.009
14emb|BX823713.1|CNS0A4T8 Arabidopsis thaliana Full-length cDNA Co... 48 0.009
15gb|BT004735.1| Arabidopsis thaliana At3g09470/F11F8_4 gene, comp... 48 0.009
16dbj|AK176808.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 48 0.009
17dbj|AK176611.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 48 0.009
18dbj|AK176494.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 48 0.009
19gb|AC148343.2| Medicago truncatula chromosome 7 BAC clone mth2-7... 46 0.034
20gb|AC148348.6| Medicago truncatula clone mth2-28b4, complete seq... 40 2.1
21gb|AC016661.7|AC016661 Arabidopsis thaliana chromosome 3 BAC F11... 40 2.1
22emb|CR376779.18| Zebrafish DNA sequence from clone CH211-236N18 ... 40 2.1
23ref|XM_417077.1| PREDICTED: Gallus gallus similar to CGI-145 pro... 38 8.2
24gb|AC158986.2| Mus musculus BAC clone RP23-284L2 from chromosome... 38 8.2
25gb|AC007353.5| Homo sapiens chromosome 16 clone RP11-488I20, com... 38 8.2
26emb|AL772179.17| Mouse DNA sequence from clone RP23-100B18 on ch... 38 8.2 
>dbj|AK064852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H05, full
            insert sequence
          Length = 1754

 Score =  167 bits (84), Expect = 1e-38
 Identities = 144/165 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    gatgattcttctgatccctcttattgcatattcaggnttacaacaggcatttgtatgggc 60
            |||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 839  gatgattcttatcatccctcttattgcatattcaggattacaacaggcatttgtatgggc 898

                                                                        
Query: 61   tgtattcacaaagagtattgtgacacctgtgcttggaatatctggagtcggtggcgccat 120
            ||| ||||| || | |||||| |||||||||||||| || ||||| || || || |||||
Sbjct: 899  tgttttcacgaaaaatattgtaacacctgtgcttggcatctctggcgttggcggagccat 958

                                                         
Query: 121  ggcaatttatggcgcatctgatgtagntngttcattggttgctgg 165
            |||||| ||||| ||| | ||||| | | ||||||||||||||||
Sbjct: 959  ggcaatatatggtgcagccgatgttgtttgttcattggttgctgg 1003
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>gb|AY107119.1| Zea mays PCO095102 mRNA sequence
          Length = 1007

 Score =  143 bits (72), Expect = 2e-31
 Identities = 129/149 (86%)
 Strand = Plus / Plus

                                                                       
Query: 17  cctcttattgcatattcaggnttacaacaggcatttgtatgggctgtattcacaaagagt 76
           |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 95  cctcttatagcatattcaggtttacaacaggcatttgtatgggcggtattcacaaagagt 154

                                                                       
Query: 77  attgtgacacctgtgcttggaatatctggagtcggtggcgccatggcaatttatggcgca 136
           ||||| ||||| || ||||| ||    || || ||||| ||||||||||||||||| |||
Sbjct: 155 attgtaacacccgttcttggcatcagcggcgttggtggagccatggcaatttatggtgca 214

                                        
Query: 137 tctgatgtagntngttcattggttgctgg 165
            | ||||||| | |||| |||||||||||
Sbjct: 215 gcagatgtagtttgttctttggttgctgg 243
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                          
Query: 1        gatgattcttctgatccctcttattgcatattcaggnttacaacaggcatttgtatgg 58
                |||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 23343093 gatgattcttatcatccctcttattgcatattcaggattacaacaggcatttgtatgg 23343036



 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                          
Query: 1        gatgattcttctgatccctcttattgcatattcaggnttacaacaggcatttgtatgg 58
                |||||||||| | ||||||||||| | ||||||||| ||||||  |||||||||||||
Sbjct: 23337453 gatgattcttatcatccctcttatagtatattcaggattacaagcggcatttgtatgg 23337396



 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                            
Query: 57       gggctgtattcacaaagagtattgtgacacctgtgcttggaatatctggagtcggtggcg 116
                ||||||| ||||| || | |||||| |||||||||||||| || ||||| || || || |
Sbjct: 23342944 gggctgttttcacgaaaaatattgtaacacctgtgcttggcatctctggcgttggcggag 23342885

                                
Query: 117      ccatggcaatttatgg 132
                |||||||||| |||||
Sbjct: 23342884 ccatggcaatatatgg 23342869



 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                            
Query: 57       gggctgtattcacaaagagtattgtgacacctgtgcttggaatatctggagtcggtggcg 116
                ||||||||||||| || | |||||| |||||||| |||||  | |||||||| || || |
Sbjct: 23337303 gggctgtattcactaaaaatattgtaacacctgttcttggcgtctctggagttggcggag 23337244

                                
Query: 117      ccatggcaatttatgg 132
                |||||||||| |||||
Sbjct: 23337243 ccatggcaatatatgg 23337228
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                          
Query: 1        gatgattcttctgatccctcttattgcatattcaggnttacaacaggcatttgtatgg 58
                |||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 23271284 gatgattcttatcatccctcttattgcatattcaggattacaacaggcatttgtatgg 23271227



 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                          
Query: 1        gatgattcttctgatccctcttattgcatattcaggnttacaacaggcatttgtatgg 58
                |||||||||| | ||||||||||| | ||||||||| ||||||  |||||||||||||
Sbjct: 23265644 gatgattcttatcatccctcttatagtatattcaggattacaagcggcatttgtatgg 23265587



 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                            
Query: 57       gggctgtattcacaaagagtattgtgacacctgtgcttggaatatctggagtcggtggcg 116
                ||||||| ||||| || | |||||| |||||||||||||| || ||||| || || || |
Sbjct: 23271135 gggctgttttcacgaaaaatattgtaacacctgtgcttggcatctctggcgttggcggag 23271076

                                
Query: 117      ccatggcaatttatgg 132
                |||||||||| |||||
Sbjct: 23271075 ccatggcaatatatgg 23271060



 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                            
Query: 57       gggctgtattcacaaagagtattgtgacacctgtgcttggaatatctggagtcggtggcg 116
                ||||||||||||| || | |||||| |||||||| |||||  | |||||||| || || |
Sbjct: 23265494 gggctgtattcactaaaaatattgtaacacctgttcttggcgtctctggagttggcggag 23265435

                                
Query: 117      ccatggcaatttatgg 132
                |||||||||| |||||
Sbjct: 23265434 ccatggcaatatatgg 23265419
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>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 168063

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                        
Query: 1      gatgattcttctgatccctcttattgcatattcaggnttacaacaggcatttgtatgg 58
              |||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 156211 gatgattcttatcatccctcttattgcatattcaggattacaacaggcatttgtatgg 156154



 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                        
Query: 1      gatgattcttctgatccctcttattgcatattcaggnttacaacaggcatttgtatgg 58
              |||||||||| | ||||||||||| | ||||||||| ||||||  |||||||||||||
Sbjct: 150571 gatgattcttatcatccctcttatagtatattcaggattacaagcggcatttgtatgg 150514



 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                          
Query: 57     gggctgtattcacaaagagtattgtgacacctgtgcttggaatatctggagtcggtggcg 116
              ||||||| ||||| || | |||||| |||||||||||||| || ||||| || || || |
Sbjct: 156062 gggctgttttcacgaaaaatattgtaacacctgtgcttggcatctctggcgttggcggag 156003

                              
Query: 117    ccatggcaatttatgg 132
              |||||||||| |||||
Sbjct: 156002 ccatggcaatatatgg 155987



 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                          
Query: 57     gggctgtattcacaaagagtattgtgacacctgtgcttggaatatctggagtcggtggcg 116
              ||||||||||||| || | |||||| |||||||| |||||  | |||||||| || || |
Sbjct: 150421 gggctgtattcactaaaaatattgtaacacctgttcttggcgtctctggagttggcggag 150362

                              
Query: 117    ccatggcaatttatgg 132
              |||||||||| |||||
Sbjct: 150361 ccatggcaatatatgg 150346
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>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 162261

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                        
Query: 1      gatgattcttctgatccctcttattgcatattcaggnttacaacaggcatttgtatgg 58
              |||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 159066 gatgattcttatcatccctcttattgcatattcaggattacaacaggcatttgtatgg 159123



 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                          
Query: 57     gggctgtattcacaaagagtattgtgacacctgtgcttggaatatctggagtcggtggcg 116
              ||||||| ||||| || | |||||| |||||||||||||| || ||||| || || || |
Sbjct: 159215 gggctgttttcacgaaaaatattgtaacacctgtgcttggcatctctggcgttggcggag 159274

                              
Query: 117    ccatggcaatttatgg 132
              |||||||||| |||||
Sbjct: 159275 ccatggcaatatatgg 159290
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>ref|NM_180215.2| Arabidopsis thaliana unknown protein AT3G09470 transcript variant
           AT3G09470.2 mRNA, complete cds
          Length = 1556

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 24  ttgcatattcaggnttacaacaggcatttgtatgggctg 62
           ||||||||||||| || ||||| |||||||| |||||||
Sbjct: 859 ttgcatattcaggattgcaacaagcatttgtttgggctg 897
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>ref|NM_111781.2| Arabidopsis thaliana unknown protein AT3G09470 transcript variant
           AT3G09470.1 mRNA, complete cds
          Length = 1780

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 24  ttgcatattcaggnttacaacaggcatttgtatgggctg 62
           ||||||||||||| || ||||| |||||||| |||||||
Sbjct: 860 ttgcatattcaggattgcaacaagcatttgtttgggctg 898
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>gb|AC125368.7| Medicago truncatula clone mth2-13h15, complete sequence
          Length = 124271

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 20    cttattgcatattcaggnttacaacaggcatttgtatgg 58
             ||||| |||||||||||  ||||||| ||||||||||||
Sbjct: 27418 cttatggcatattcaggtctacaacaagcatttgtatgg 27380



 Score = 40.1 bits (20), Expect = 2.1
 Identities = 34/39 (87%)
 Strand = Plus / Minus

                                                    
Query: 20    cttattgcatattcaggnttacaacaggcatttgtatgg 58
             ||||| |||||||||||  ||||||| || |||||||||
Sbjct: 34060 cttatagcatattcaggtctacaacacgcttttgtatgg 34022
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>gb|AC135797.13| Medicago truncatula clone mth2-11f7, complete sequence
          Length = 118242

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 20    cttattgcatattcaggnttacaacaggcatttgtatgg 58
             ||||| |||||||||||  ||||||| ||||||||||||
Sbjct: 21390 cttatggcatattcaggtctacaacaagcatttgtatgg 21352



 Score = 40.1 bits (20), Expect = 2.1
 Identities = 34/39 (87%)
 Strand = Plus / Minus

                                                    
Query: 20    cttattgcatattcaggnttacaacaggcatttgtatgg 58
             ||||| |||||||||||  ||||||| || |||||||||
Sbjct: 28032 cttatagcatattcaggtctacaacacgcttttgtatgg 27994
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>gb|AY049250.1| Arabidopsis thaliana AT3g09470/F11F8_4 mRNA, complete cds
          Length = 1780

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 24  ttgcatattcaggnttacaacaggcatttgtatgggctg 62
           ||||||||||||| || ||||| |||||||| |||||||
Sbjct: 860 ttgcatattcaggattgcaacaagcatttgtttgggctg 898
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>emb|BX822565.1|CNS0A79N Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB49ZE04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1478

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 24  ttgcatattcaggnttacaacaggcatttgtatgggctg 62
           ||||||||||||| || ||||| |||||||| |||||||
Sbjct: 847 ttgcatattcaggattgcaacaagcatttgtttgggctg 885
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>emb|BX823407.1|CNS0A6L4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS34ZA02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1524

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 24  ttgcatattcaggnttacaacaggcatttgtatgggctg 62
           ||||||||||||| || ||||| |||||||| |||||||
Sbjct: 849 ttgcatattcaggattgcaacaagcatttgtttgggctg 887
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>emb|BX823713.1|CNS0A4T8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS6ZA01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1457

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 24  ttgcatattcaggnttacaacaggcatttgtatgggctg 62
           ||||||||||||| || ||||| |||||||| |||||||
Sbjct: 823 ttgcatattcaggattgcaacaagcatttgtttgggctg 861
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>gb|BT004735.1| Arabidopsis thaliana At3g09470/F11F8_4 gene, complete cds
          Length = 1395

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 24  ttgcatattcaggnttacaacaggcatttgtatgggctg 62
           ||||||||||||| || ||||| |||||||| |||||||
Sbjct: 770 ttgcatattcaggattgcaacaagcatttgtttgggctg 808
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>dbj|AK176808.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-35-M14
          Length = 1541

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 24  ttgcatattcaggnttacaacaggcatttgtatgggctg 62
           ||||||||||||| || ||||| |||||||| |||||||
Sbjct: 860 ttgcatattcaggattgcaacaagcatttgtttgggctg 898
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>dbj|AK176611.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-13-J23
          Length = 1524

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 24  ttgcatattcaggnttacaacaggcatttgtatgggctg 62
           ||||||||||||| || ||||| |||||||| |||||||
Sbjct: 874 ttgcatattcaggattgcaacaagcatttgtttgggctg 912
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>dbj|AK176494.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-01-F16
          Length = 1524

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 24  ttgcatattcaggnttacaacaggcatttgtatgggctg 62
           ||||||||||||| || ||||| |||||||| |||||||
Sbjct: 874 ttgcatattcaggattgcaacaagcatttgtttgggctg 912
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>gb|AC148343.2| Medicago truncatula chromosome 7 BAC clone mth2-70c24, complete
             sequence
          Length = 87311

 Score = 46.1 bits (23), Expect = 0.034
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 17    cctcttattgcatattcaggnttacaacaggcatttgtatgg 58
             ||||||||||||||||||||  |||||   ||||||||||||
Sbjct: 66113 cctcttattgcatattcaggtctacaagcagcatttgtatgg 66072
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>gb|AC148348.6| Medicago truncatula clone mth2-28b4, complete sequence
          Length = 118633

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 110   ggtggcgccatggcaatttatggc 133
             ||||||||||||||| ||||||||
Sbjct: 46445 ggtggcgccatggcattttatggc 46422
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>gb|AC016661.7|AC016661 Arabidopsis thaliana chromosome 3 BAC F11F8 genomic sequence, complete
             sequence
          Length = 107603

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                            
Query: 24    ttgcatattcaggnttacaacaggcatttgt 54
             ||||||||||||| || ||||| ||||||||
Sbjct: 11368 ttgcatattcaggattgcaacaagcatttgt 11338
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>emb|CR376779.18| Zebrafish DNA sequence from clone CH211-236N18 in linkage group 7,
              complete sequence
          Length = 177160

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     gggctgtattcacaaagagt 76
              ||||||||||||||||||||
Sbjct: 137919 gggctgtattcacaaagagt 137938
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>ref|XM_417077.1| PREDICTED: Gallus gallus similar to CGI-145 protein (LOC418883),
           mRNA
          Length = 1202

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   atgattcttctgatccctc 20
           |||||||||||||||||||
Sbjct: 206 atgattcttctgatccctc 188
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>gb|AC158986.2| Mus musculus BAC clone RP23-284L2 from chromosome 15, complete sequence
          Length = 226001

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 56     tgggctgtattcacaaaga 74
              |||||||||||||||||||
Sbjct: 134552 tgggctgtattcacaaaga 134534
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>gb|AC007353.5| Homo sapiens chromosome 16 clone RP11-488I20, complete sequence
          Length = 201061

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 67    cacaaagagtattgtgaca 85
             |||||||||||||||||||
Sbjct: 92117 cacaaagagtattgtgaca 92135
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>emb|AL772179.17| Mouse DNA sequence from clone RP23-100B18 on chromosome 2, complete
              sequence
          Length = 194065

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 59     gctgtattcacaaagagtattgt 81
              ||||||||||||||| |||||||
Sbjct: 153066 gctgtattcacaaagtgtattgt 153088


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,158,262
Number of Sequences: 3902068
Number of extensions: 1158262
Number of successful extensions: 68117
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68055
Number of HSP's gapped (non-prelim): 61
length of query: 169
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 147
effective length of database: 17,147,199,772
effective search space: 2520638366484
effective search space used: 2520638366484
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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