| Clone Name | basd25b05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | MCMR_DROME (Q9VF30) DNA replication licensing factor REC (Protei... | 30 | 7.8 |
|---|
>MCMR_DROME (Q9VF30) DNA replication licensing factor REC (Protein mini| chromosome maintenance-related) (Protein recombination-defective) Length = 885 Score = 29.6 bits (65), Expect = 7.8 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = -3 Query: 592 RRGGRIRPGAGSAVLLFSPSNGTE-SKGS*QDPPATAVPRSWSRHCLGTAASE-RFVHLL 419 RR GR+ P G+ P+ G + + PPAT PR WSR TA R HL Sbjct: 32 RRNGRVIPAGGNR----QPNQGEPGAPDAPSVPPATRQPRGWSR----TAGKRGRNAHLD 83 Query: 418 C 416 C Sbjct: 84 C 84 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,505,137 Number of Sequences: 219361 Number of extensions: 1403800 Number of successful extensions: 4309 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 4165 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4307 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5881538857 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)