ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd24l24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YP18_YEAST (Q06489) Hypothetical 45.0 kDa protein in PIS1-CLB2 i... 61 2e-09
2MTNA_THEMA (Q9X013) Probable methylthioribose-1-phosphate isomer... 60 3e-09
3MTNA_PSEAE (Q9HZ65) Probable methylthioribose-1-phosphate isomer... 56 5e-08
4MTNA_LEPIN (Q8F2A8) Probable methylthioribose-1-phosphate isomer... 54 2e-07
5MTNA_LEPIC (Q72T46) Probable methylthioribose-1-phosphate isomer... 54 2e-07
6YQJQ_CAEEL (Q93169) Hypothetical protein C01G10.9 in chromosome V 50 4e-06
7MTNA_XYLFA (Q9PAG5) Probable methylthioribose-1-phosphate isomer... 49 6e-06
8MTNA_XYLFT (Q87A92) Probable methylthioribose-1-phosphate isomer... 48 1e-05
9EI2B_AQUAE (O67879) Putative translation initiation factor eIF-2... 48 2e-05
10EI2B1_ARCFU (O29877) Putative translation initiation factor eIF-... 45 1e-04
11MTNA_BACSU (O31662) Methylthioribose-1-phosphate isomerase (EC 5... 45 1e-04
12EI2B1_METTH (O27900) Putative translation initiation factor eIF-... 45 2e-04
13MTNA_PSESM (Q885T7) Probable methylthioribose-1-phosphate isomer... 45 2e-04
14EI2B1_METJA (Q57896) Putative translation initiation factor eIF-... 43 5e-04
15MTNA_PSEPK (Q88M09) Probable methylthioribose-1-phosphate isomer... 42 0.001
16EI2B1_PYRFU (Q8U178) Putative translation initiation factor eIF-... 41 0.002
17EI2B1_AERPE (Q9YE84) Putative translation initiation factor eIF-... 40 0.004
18EI2B1_PYRHO (O58433) Putative translation initiation factor eIF-... 40 0.004
19YPE3_RHORU (P23140) Hypothetical protein in petC 3'region (Fragm... 38 0.015
20MTNA_SYNY3 (P74497) Probable methylthioribose-1-phosphate isomer... 37 0.043
21EI2B1_PYRAB (Q9UZ16) Putative translation initiation factor eIF-... 36 0.074
22TALA_DICDI (P54633) Filopodin (Talin homolog) 33 0.48

>YP18_YEAST (Q06489) Hypothetical 45.0 kDa protein in PIS1-CLB2 intergenic|
           region
          Length = 411

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 16/154 (10%)
 Frame = +1

Query: 100 ALQSILYGRG-----ALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXX 264
           +L++I++ R      ++++LDQ  LP    YV +    DG++ I+ M VRG         
Sbjct: 2   SLEAIVFDRSEPENVSVKVLDQLLLPYTTKYVPIHTIDDGYSVIKSMQVRGAPAIAIVGS 61

Query: 265 XXXXVEVN--DHNFIGTPAEAASFVS---------KKLEYLVSSRPTAVNLSDAATKLQN 411
                EV    HN     A   S V+         K+L++L+SSRPTAVNLS++  +++N
Sbjct: 62  LSVLTEVQLIKHNPTSDVATLYSLVNWESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIKN 121

Query: 412 LVSTTAETAKDAKSIFQVXIEAAXTMLVDDVADN 513
           ++ ++++      S++    E    ++ +D+A+N
Sbjct: 122 ILKSSSDLKAFDGSLYNYVCE----LIDEDLANN 151



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>MTNA_THEMA (Q9X013) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 343

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 39/131 (29%), Positives = 65/131 (49%)
 Frame = +1

Query: 130 ALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVEVNDHNFIGT 309
           +L+LLDQRKLP  E YV+ K   +  +AI++M+VRG             + + D+     
Sbjct: 14  SLKLLDQRKLPFIEEYVECKTHEEVAHAIKEMIVRGAPAIGVAAAFGYVLGLRDYK---- 69

Query: 310 PAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQVXIEAAXTM 489
                 ++ +  E L  +RPTAVNL  A  +++ +    A    D +++F++    A  M
Sbjct: 70  TGSLTDWMKQVKETLARTRPTAVNLFWALNRMEKVFFENA----DRENLFEILENEALKM 125

Query: 490 LVDDVADNXAI 522
             +D+  N AI
Sbjct: 126 AYEDIEVNKAI 136



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>MTNA_PSEAE (Q9HZ65) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 358

 Score = 56.2 bits (134), Expect = 5e-08
 Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
 Frame = +1

Query: 82  RMGESSALQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXX 261
           R+  +  +++I +  G LRLLDQR LP EEV+++ + +A+   AIRDMVVRG        
Sbjct: 4   RLLAAERVKAIEWRDGTLRLLDQRLLPQEEVWLEHESAAEVAKAIRDMVVRGAPAIGISA 63

Query: 262 XXXXXVEVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAE--- 432
                +        G    AA  + +    L  SRPTAVNL  A  ++++ +    E   
Sbjct: 64  AYGIVLGARARLAQGGDWRAA--LEEDFRLLADSRPTAVNLFWALNRMRDRLERMKEGDQ 121

Query: 433 ----TAKDAKSIFQVXIEAAXTM 489
                  +A SI +   EA  TM
Sbjct: 122 PLAVLEAEAISIHESDREANLTM 144



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>MTNA_LEPIN (Q8F2A8) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 364

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 45/144 (31%), Positives = 67/144 (46%)
 Frame = +1

Query: 91  ESSALQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXX 270
           + S L+ IL+    L LLDQR LP    Y+  K   D   AIR+MVVRG           
Sbjct: 2   QESGLKPILWKNKELILLDQRVLPGTTSYITAKTLEDCIFAIREMVVRGAPAIAITGAFG 61

Query: 271 XXVEVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAK 450
             +  N  + +  P  + S +  KL  L+ SRPTAVNL  A  +  +    +  ++   +
Sbjct: 62  ITLYWN--SLVSKP--SFSELKLKLSELLESRPTAVNLRLAIEEFSSRFPESNYSSFSLE 117

Query: 451 SIFQVXIEAAXTMLVDDVADNXAI 522
            I +   E A  ML +D+ +N  +
Sbjct: 118 EIQKGAEELALFMLSEDLENNLTL 141



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>MTNA_LEPIC (Q72T46) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 364

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 45/144 (31%), Positives = 67/144 (46%)
 Frame = +1

Query: 91  ESSALQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXX 270
           + S L+ IL+    L LLDQR LP    Y+  K   D   AIR+MVVRG           
Sbjct: 2   QESGLKPILWKNKELILLDQRVLPGTTSYITAKTLEDCIFAIREMVVRGAPAIAITGAFG 61

Query: 271 XXVEVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAK 450
             +  N  + +  P  + S +  KL  L+ SRPTAVNL  A  +  +    +  ++   +
Sbjct: 62  ITLYWN--SLVSKP--SFSELKLKLSELLESRPTAVNLRLAIEEFSSRFPESNYSSFSLE 117

Query: 451 SIFQVXIEAAXTMLVDDVADNXAI 522
            I +   E A  ML +D+ +N  +
Sbjct: 118 EIQKGAEELALFMLSEDLENNLTL 141



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>YQJQ_CAEEL (Q93169) Hypothetical protein C01G10.9 in chromosome V|
          Length = 366

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 31/111 (27%), Positives = 57/111 (51%)
 Frame = +1

Query: 91  ESSALQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXX 270
           ES  L S+ +    L +LDQ  LP E  Y+ V+  +D +  I+ M VRG           
Sbjct: 21  ESKRLDSLKFDGTNLEVLDQLLLPHEFKYIPVEGVSDAFAVIKSMQVRGAPLIAVVGSLG 80

Query: 271 XXVEVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVST 423
             +E+   + + + +     + +K+ +L+SSRPTAV+L ++   L+ ++ +
Sbjct: 81  LLLEIQKASELDSES-----IIQKINFLISSRPTAVDLRNSLNGLKPILES 126



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>MTNA_XYLFA (Q9PAG5) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 354

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 5/134 (3%)
 Frame = +1

Query: 103 LQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVE 282
           ++ IL+    L+LLDQRKLP    YV+   S D   AIR ++VRG             + 
Sbjct: 15  VRPILWTGHFLKLLDQRKLPFVVEYVECHSSEDVTQAIRALIVRGAPAIGIVAGWGAVLA 74

Query: 283 VNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTT-----AETAKDA 447
             +   +    EA   +   L+ L ++RPTAVNL+    +++  +S          A++A
Sbjct: 75  AREIEAV-DGIEALRKLEPALQRLHAARPTAVNLAWVLARMRRTLSAAHADWRQAMAREA 133

Query: 448 KSIFQVXIEAAXTM 489
           +SI +  + A   M
Sbjct: 134 ESIAREDLTANRCM 147



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>MTNA_XYLFT (Q87A92) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 354

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 33/106 (31%), Positives = 52/106 (49%)
 Frame = +1

Query: 103 LQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVE 282
           ++ IL+    L+LLDQRKLP    YV+   S D   AIR ++VRG             + 
Sbjct: 15  VRPILWTGHFLKLLDQRKLPFVVEYVECHSSEDVTQAIRTLIVRGAPAIGIVAGWGAVLA 74

Query: 283 VNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVS 420
             +   +    EA   +   L+ L ++RPTAVNL+    +++  +S
Sbjct: 75  AREIEAV-DGIEALCKLEPALQRLHAARPTAVNLAWVLARMRRTLS 119



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>EI2B_AQUAE (O67879) Putative translation initiation factor eIF-2B (eIF-2B|
           GDP-GTP exchange factor)
          Length = 456

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 37/134 (27%), Positives = 59/134 (44%)
 Frame = +1

Query: 88  GESSALQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXX 267
           GE   ++   +    L LLDQRKLP +EV++++K   +   AI++M VRG          
Sbjct: 128 GEKMEVKPFYWKGDKLLLLDQRKLPHQEVWLELKTYEEVAKAIKEMAVRGAPAIGCTAA- 186

Query: 268 XXXVEVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDA 447
                   + F+           K  E L ++RPTA NL  A  ++   +    +  ++A
Sbjct: 187 --------YGFVLGVKVQKEDPEKVYETLKNTRPTAYNLFWALDRMMKALKEGKDIEEEA 238

Query: 448 KSIFQVXIEAAXTM 489
           K I +   EA   M
Sbjct: 239 KEIEKEDYEANKRM 252



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>EI2B1_ARCFU (O29877) Putative translation initiation factor eIF-2B subunit 1|
           (eIF-2B GDP-GTP exchange factor)
          Length = 339

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 33/137 (24%), Positives = 62/137 (45%)
 Frame = +1

Query: 103 LQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVE 282
           ++SI +  G L+L+DQ KLP +   ++ ++  +  +AI+ + VRG             + 
Sbjct: 1   MRSIFWDDG-LKLIDQTKLPEKLEVIECRNVEELADAIKKLAVRGAPALEAAGAYGIALA 59

Query: 283 VNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQ 462
             +  F     E    + K  ++L S+RPTAVNL     +  N     A   +  + + +
Sbjct: 60  AREREFADVD-ELKEHLKKAADFLASTRPTAVNLFVGIERALN----AALKGESVEEVKE 114

Query: 463 VXIEAAXTMLVDDVADN 513
           + +  A  +  +DV  N
Sbjct: 115 LALREAEKLAEEDVERN 131



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>MTNA_BACSU (O31662) Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)|
           (MTR-1-P isomerase)
          Length = 353

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
 Frame = +1

Query: 106 QSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVEV 285
           +S+ +   A+ +L+Q+KLP E  Y+++    D ++AI  + VRG             +  
Sbjct: 9   RSVEWKETAITILNQQKLPDETEYLELTTKEDVFDAIVTLKVRGAPAIGITAAFGLALAA 68

Query: 286 NDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKL----QNLVSTTAETAKDAKS 453
            D        E    +    +YL SSRPTA+NLS A  +L    +N +S           
Sbjct: 69  KDIE-TDNVTEFRRRLEDIKQYLNSSRPTAINLSWALERLSHSVENAISVNEAKTNLVHE 127

Query: 454 IFQVXIEAAXT 486
             Q+ +E   T
Sbjct: 128 AIQIQVEDEET 138



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>EI2B1_METTH (O27900) Putative translation initiation factor eIF-2B subunit 1|
           (eIF-2B GDP-GTP exchange factor)
          Length = 311

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 41/140 (29%), Positives = 60/140 (42%)
 Frame = +1

Query: 103 LQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVE 282
           +++I +  G L L+DQRKLP    Y   +D  D   AI++MVVRG             + 
Sbjct: 3   MKTIEWKDGELVLIDQRKLPDSLEYFRCRDYRDVIYAIKNMVVRGAPAIGVTAAFGVAMA 62

Query: 283 VNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQ 462
                  G   E A+      E + +SRPTAVNL  A  ++    S              
Sbjct: 63  ----ELAGEDVEVAA------EEIKASRPTAVNLFWAVDRVMKSESP------------- 99

Query: 463 VXIEAAXTMLVDDVADNXAI 522
             ++ A TM ++D+  N AI
Sbjct: 100 --LDEAITMYMEDMETNRAI 117



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>MTNA_PSESM (Q885T7) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 358

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 34/110 (30%), Positives = 52/110 (47%)
 Frame = +1

Query: 82  RMGESSALQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXX 261
           R+  +  +++I +   AL LLDQR LP EEV+     +A    AIR MVVRG        
Sbjct: 4   RLLAAEKVKAIDWRDDALYLLDQRVLPFEEVWHRYTTAAGVAEAIRTMVVRGAPAIGISA 63

Query: 262 XXXXXVEVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQN 411
                +       I    +    + + ++ L  SRPTAVNL  A  ++++
Sbjct: 64  AYGAVLGARAR--IAEGGDWYPALEEDMQLLADSRPTAVNLFWALNRIRD 111



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>EI2B1_METJA (Q57896) Putative translation initiation factor eIF-2B subunit 1|
           (eIF-2B GDP-GTP exchange factor)
          Length = 329

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 37/115 (32%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
 Frame = +1

Query: 133 LRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGX-XXXXXXXXXXXXVEVNDHNFIGT 309
           L L+DQRKLP +  Y   K   D   AI+DMVVRG               E+N  +    
Sbjct: 17  LILIDQRKLPNKLEYFICKTYEDVAYAIKDMVVRGAPAIGVSAAYGLALAEINGDD---- 72

Query: 310 PAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQVXIE 474
                  + K  E L ++RPTAVNL  A  +             +AK I +  IE
Sbjct: 73  -------IYKAYEVLKNTRPTAVNLFWALDRCLTAYKEGKSILDEAKKIHEEDIE 120



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>MTNA_PSEPK (Q88M09) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 358

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 33/109 (30%), Positives = 49/109 (44%)
 Frame = +1

Query: 82  RMGESSALQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXX 261
           R+  +  + +I +  GAL LLDQR LP EE ++   + A    AIRDM VRG        
Sbjct: 4   RLLAAEKVTAIRWQGGALHLLDQRLLPSEERWLACDNVAQVAAAIRDMAVRGASAIGIAA 63

Query: 262 XXXXXVEVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQ 408
                + + +    G   E    +      L  +RPTA NL  A  +++
Sbjct: 64  AYGLVLALEERLAEGGDWEMD--LEDDFLTLAEARPTAANLFWALNRMR 110



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>EI2B1_PYRFU (Q8U178) Putative translation initiation factor eIF-2B subunit 1|
           (eIF-2B GDP-GTP exchange factor)
          Length = 356

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 3/139 (2%)
 Frame = +1

Query: 106 QSILYGRGALRLLDQRKLPLE---EVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXX 276
           +S+ Y  G + +++QR LP E   E +  V+  A+   AI++M VRG             
Sbjct: 15  RSVEYREGKVYMINQRLLPREFKVEEFTTVEAVAE---AIKNMTVRGAPAIGAAAAFGLA 71

Query: 277 VEVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSI 456
           +         T  E      +  E L ++RPTAVNL  A  +++ LV    E + D   I
Sbjct: 72  LYAETSK-AKTKDEFFDGFYRAYETLKNTRPTAVNLFWALNRIKKLVEEHREDSLD--EI 128

Query: 457 FQVXIEAAXTMLVDDVADN 513
            ++ +E A  +  +DV  N
Sbjct: 129 KRLIVEEAQKIADEDVEAN 147



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>EI2B1_AERPE (Q9YE84) Putative translation initiation factor eIF-2B subunit 1|
           (eIF-2B GDP-GTP exchange factor)
          Length = 370

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 38/137 (27%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
 Frame = +1

Query: 118 YGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVEVNDHN 297
           +  G    LD R +P  EVY    D      AI DM +RG             +   +  
Sbjct: 28  FDEGVFVWLDTRLIPFREVYRRTSDYRRVARAIVDMEIRGAPAIGVAAAYALALAAAEAA 87

Query: 298 FIGTPA--EAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQVXI 471
             G     EA S   +++E   S+RPTA NL  A  ++   VS  A       +  +  +
Sbjct: 88  SRGGEGFIEALSEARREIE---STRPTAYNLFWATARVYGAVS-EAFRRSGVDAAVRAGL 143

Query: 472 EAAXTMLVDDVADNXAI 522
           E A  + V+DV  N  I
Sbjct: 144 EEATRIYVEDVRGNVEI 160



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>EI2B1_PYRHO (O58433) Putative translation initiation factor eIF-2B subunit 1|
           (eIF-2B GDP-GTP exchange factor)
          Length = 364

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
 Frame = +1

Query: 106 QSILYGRGALRLLDQRKLPLE---EVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXX 276
           +++ Y   ++ +++QR LP E   E +  V++ A+   AI++M VRG             
Sbjct: 15  RTVEYKNKSVYMINQRLLPKEFKVEKFSKVEEVAE---AIKNMTVRGAPAIGAAAGFGLA 71

Query: 277 VEVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSI 456
           +         T  E      K  E L ++RPTAVNL  A  +++ LV   +E   D   I
Sbjct: 72  LYAETSK-AKTKEEFLDGFEKAYEILKNTRPTAVNLFWALNRIKKLVEEHSEDPLD--EI 128

Query: 457 FQVXIEAAXTMLVDDVADN 513
            ++ ++ A  +  +DV  N
Sbjct: 129 KRLIVQEAYKIADEDVEAN 147



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>YPE3_RHORU (P23140) Hypothetical protein in petC 3'region (Fragment)|
          Length = 184

 Score = 38.1 bits (87), Expect = 0.015
 Identities = 36/132 (27%), Positives = 63/132 (47%)
 Frame = +1

Query: 127 GALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVEVNDHNFIG 306
           GA+ ++DQ +LP E V   + D     +AIR M+VRG             + + +     
Sbjct: 18  GAVWIIDQTRLPHEFVTQRLNDLGAVAHAIRAMLVRGAPLIGATAAYGVALGMAE----- 72

Query: 307 TPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQVXIEAAXT 486
            P++    +++  + L+++RPTAVNL  A   ++ +  + A    D ++  Q     A  
Sbjct: 73  DPSDEG--LTRACQTLLATRPTAVNLRWA---IEAMAESLAAVPPDQRA--QAAWAKAGA 125

Query: 487 MLVDDVADNXAI 522
           +  +DVA N AI
Sbjct: 126 ICDEDVALNEAI 137



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>MTNA_SYNY3 (P74497) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 351

 Score = 36.6 bits (83), Expect = 0.043
 Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 4/132 (3%)
 Frame = +1

Query: 139 LLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVEVNDHNFIGTPAE 318
           L+DQ +LPLE   V + D     +AI+ MVVRG             +            E
Sbjct: 22  LIDQTRLPLEYKEVAIADYEAMGHAIKSMVVRGAPAIGVAAAYGMYLGARRIQ----TTE 77

Query: 319 AASFVSKKLEY----LVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQVXIEAAXT 486
              FV  +LE+    L  +RPTAVNL  A  ++ N+   + E  +  K+     +  A  
Sbjct: 78  LREFV-VQLEFVADQLRQTRPTAVNLFWAIDQMLNVAYHSGENVEQIKANL---LSQAQQ 133

Query: 487 MLVDDVADNXAI 522
           + +DD+    AI
Sbjct: 134 IQLDDLRTCQAI 145



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>EI2B1_PYRAB (Q9UZ16) Putative translation initiation factor eIF-2B subunit 1|
           (eIF-2B GDP-GTP exchange factor)
          Length = 356

 Score = 35.8 bits (81), Expect = 0.074
 Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 3/139 (2%)
 Frame = +1

Query: 106 QSILYGRGALRLLDQRKLPLE---EVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXX 276
           +S+ Y    + +++QR LP E   E +  V+  A+   AI++M VRG             
Sbjct: 15  RSVEYKERTVYMINQRLLPREFKVEAFRTVESVAE---AIKNMTVRGAPAIGAAAAFGLA 71

Query: 277 VEVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSI 456
           +                F  K  E L ++RPTAVNL  A  +++ LV    E   D   I
Sbjct: 72  LYAETSKAKSKDEFMDGFY-KAYETLKNTRPTAVNLFWALNRIKKLVEEHLEDPLD--EI 128

Query: 457 FQVXIEAAXTMLVDDVADN 513
             + +  A  +  +DV  N
Sbjct: 129 KSLIVNEAQKIADEDVEAN 147



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>TALA_DICDI (P54633) Filopodin (Talin homolog)|
          Length = 2492

 Score = 33.1 bits (74), Expect = 0.48
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +1

Query: 307  TPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSI 456
            T  +A   +    + + SSR T  +L  A TK+ N VS+  +TAKD  S+
Sbjct: 1977 TITQAKLLIVSSSQLVGSSRGTQEHLGSATTKVANTVSSLVKTAKDIASV 2026


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.130    0.353 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,062,913
Number of Sequences: 219361
Number of extensions: 998436
Number of successful extensions: 2970
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2955
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3985467738
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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