| Clone Name | basd25a24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_502937.1| Yarrowia lipolytica CLIB122, YALI0D17380g predicted mRNA Length = 480 Score = 42.1 bits (21), Expect = 0.29 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 gaaaagctcaatgacctgctg 80 ||||||||||||||||||||| Sbjct: 448 gaaaagctcaatgacctgctg 468
>gb|AC087256.9| Homo sapiens 12q BAC RP11-443N24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 149546 Score = 42.1 bits (21), Expect = 0.29 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 caatgacctgctgaagggtcttaaa 92 ||||||||||||||||| ||||||| Sbjct: 106652 caatgacctgctgaaggatcttaaa 106628
>gb|AC021868.17|AC021868 Homo sapiens 12 BAC RP11-679N16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168227 Score = 42.1 bits (21), Expect = 0.29 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 caatgacctgctgaagggtcttaaa 92 ||||||||||||||||| ||||||| Sbjct: 28386 caatgacctgctgaaggatcttaaa 28410
>gb|AC019209.3|AC019209 Homo sapiens BAC clone RP11-443N24 from Sequence-12, complete sequence Length = 196817 Score = 42.1 bits (21), Expect = 0.29 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 caatgacctgctgaagggtcttaaa 92 ||||||||||||||||| ||||||| Sbjct: 153923 caatgacctgctgaaggatcttaaa 153899
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 42.1 bits (21), Expect = 0.29 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 gaaaagctcaatgacctgctg 80 ||||||||||||||||||||| Sbjct: 2142359 gaaaagctcaatgacctgctg 2142339
>gb|AE006286.1| Lactococcus lactis subsp. lactis IL1403 section 48 of 218 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 1.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tgccccctgaaaagctcaat 71 |||||||||||||||||||| Sbjct: 6640 tgccccctgaaaagctcaat 6621
>ref|XM_854771.1| PREDICTED: Canis familiaris similar to LYST-interacting protein LIP8, transcript variant 2 (LOC489484), mRNA Length = 1977 Score = 40.1 bits (20), Expect = 1.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 cccctgttgatctgccccct 59 |||||||||||||||||||| Sbjct: 1475 cccctgttgatctgccccct 1494
>ref|XM_546602.2| PREDICTED: Canis familiaris similar to LYST-interacting protein LIP8, transcript variant 1 (LOC489484), mRNA Length = 2957 Score = 40.1 bits (20), Expect = 1.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 cccctgttgatctgccccct 59 |||||||||||||||||||| Sbjct: 2186 cccctgttgatctgccccct 2205
>gb|AF323673.1|AF323673 Bacteriophage bIL312, complete genome Length = 15179 Score = 40.1 bits (20), Expect = 1.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tgccccctgaaaagctcaat 71 |||||||||||||||||||| Sbjct: 7948 tgccccctgaaaagctcaat 7929
>gb|AC154392.18| Mus musculus chromosome 1, clone RP23-413K6, complete sequence Length = 205076 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 tgatctgccccctgaaaag 65 ||||||||||||||||||| Sbjct: 136814 tgatctgccccctgaaaag 136832
>gb|BT015260.1| Drosophila melanogaster LD45662 full insert cDNA Length = 4060 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 tggcgcaggcaatgacagc 26 ||||||||||||||||||| Sbjct: 1758 tggcgcaggcaatgacagc 1776
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 28 acgcggacgatgcccctgt 46 ||||||||||||||||||| Sbjct: 2090376 acgcggacgatgcccctgt 2090358
>emb|BX571861.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 3/17 Length = 342905 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 tttggcgcaggcaatgaca 24 ||||||||||||||||||| Sbjct: 57095 tttggcgcaggcaatgaca 57077
>gb|AC104610.13| Drosophila melanogaster 3L BAC RP98-35J16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 138534 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 tggcgcaggcaatgacagc 26 ||||||||||||||||||| Sbjct: 80759 tggcgcaggcaatgacagc 80741
>gb|AY113584.1| Drosophila melanogaster RH35718 full insert cDNA Length = 3692 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 tggcgcaggcaatgacagc 26 ||||||||||||||||||| Sbjct: 1396 tggcgcaggcaatgacagc 1414
>ref|NM_132159.1| Drosophila melanogaster CG1677-RA (CG1677), mRNA Length = 3678 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 tggcgcaggcaatgacagc 26 ||||||||||||||||||| Sbjct: 1395 tggcgcaggcaatgacagc 1413
>gb|AC080089.5| Homo sapiens BAC clone RP11-785J10 from 4, complete sequence Length = 174023 Score = 38.2 bits (19), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 79 tgaagggtcttaaatttgatgtt 101 ||||||||||||| ||||||||| Sbjct: 54477 tgaagggtcttaactttgatgtt 54499
>gb|AE003440.3| Drosophila melanogaster chromosome X, section 24 of 74 of the complete sequence Length = 342195 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 tggcgcaggcaatgacagc 26 ||||||||||||||||||| Sbjct: 112146 tggcgcaggcaatgacagc 112128 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 698,045 Number of Sequences: 3902068 Number of extensions: 698045 Number of successful extensions: 42869 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 42823 Number of HSP's gapped (non-prelim): 46 length of query: 101 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 80 effective length of database: 17,151,101,840 effective search space: 1372088147200 effective search space used: 1372088147200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)