>gb|AC098734.3| Mus musculus BAC clone RP23-121L4 from 14, complete sequence
          Length = 196797

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 67     actgaaataactgaaaaggttt 88
              ||||||||||||||||||||||
Sbjct: 173661 actgaaataactgaaaaggttt 173682

>gb|AC114559.8| Mus musculus, clone RP23-50G21, complete sequence
          Length = 173404

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 67    actgaaataactgaaaaggttt 88
             ||||||||||||||||||||||
Sbjct: 79895 actgaaataactgaaaaggttt 79916

>gb|AE014173.1| Mus musculus piebald deletion region section 1 of 11 of the complete
              sequence
          Length = 400029

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 67     actgaaataactgaaaaggttt 88
              ||||||||||||||||||||||
Sbjct: 285390 actgaaataactgaaaaggttt 285369

>gb|AC080021.3| Genomic sequence for Mus musculus, clone RP23-422L7, complete sequence
          Length = 200065

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 67     actgaaataactgaaaaggttt 88
              ||||||||||||||||||||||
Sbjct: 194977 actgaaataactgaaaaggttt 194956

>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold
          Length = 1743090

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 235     gttgccgtgagctatgatgat 255
               |||||||||||||||||||||
Sbjct: 1400903 gttgccgtgagctatgatgat 1400883

>ref|XM_647128.1| Entamoeba histolytica HM-1:IMSS amino acid transporter, putative
           (127.t00011) partial mRNA
          Length = 1431

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 63  tgatactgaaataactgaaaa 83
           |||||||||||||||||||||
Sbjct: 753 tgatactgaaataactgaaaa 733

>emb|AL391477.20| Human DNA sequence from clone RP11-21M14 on chromosome 1, complete
              sequence
          Length = 150154

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 134    tctcagcctgagtttcttctt 154
              |||||||||||||||||||||
Sbjct: 123863 tctcagcctgagtttcttctt 123883

>gb|AC011508.5| Homo sapiens chromosome 19 clone CTD-2160O21, complete sequence
          Length = 95480

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 71    aaataactgaaaaggtttcagatga 95
             ||||||||||| |||||||||||||
Sbjct: 85748 aaataactgaagaggtttcagatga 85724

>gb|AC146656.3| Otolemur garnettii clone CH256-389C8, complete sequence
          Length = 185109

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 235   gttgccgtgagctatgatgat 255
             |||||||||||||||||||||
Sbjct: 40587 gttgccgtgagctatgatgat 40567

>gb|AC006213.1|AC006213 Homo sapiens, clone hRPK.15_A_1, complete sequence
          Length = 160754

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 71     aaataactgaaaaggtttcagatga 95
              ||||||||||| |||||||||||||
Sbjct: 131696 aaataactgaagaggtttcagatga 131720

>ref|NM_127582.2| Arabidopsis thaliana unknown protein AT2G20230 mRNA, complete cds
          Length = 1666

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  tgatgaagctgacggaggcg 49
           ||||||||||||||||||||
Sbjct: 380 tgatgaagctgacggaggcg 361

>gb|AC164096.3| Mus musculus BAC clone RP23-356H17 from chromosome 8, complete sequence
          Length = 229851

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 195    agtcacagaatatttgtaagcctc 218
              ||||| ||||||||||||||||||
Sbjct: 161715 agtcatagaatatttgtaagcctc 161692

>emb|CR956391.5| Pig DNA sequence from clone PigE-133M12 on chromosome 7, complete
             sequence
          Length = 168012

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   tgttgccgtgagctatgatg 253
             ||||||||||||||||||||
Sbjct: 41334 tgttgccgtgagctatgatg 41353

>emb|AL031744.8|PFMAL1P1 Plasmodium falciparum DNA from MAL1P1, complete sequence
          Length = 124330

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   ctcctcacaactttatcttg 235
             ||||||||||||||||||||
Sbjct: 39020 ctcctcacaactttatcttg 39001

>dbj|AB192510.1| Sus scrofa genomic DNA, chromosome 7, BAC clone: L111D05, complete
             sequence
          Length = 150159

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   tgttgccgtgagctatgatg 253
             ||||||||||||||||||||
Sbjct: 48009 tgttgccgtgagctatgatg 47990

>gb|AC006569.5| Arabidopsis thaliana chromosome 2 clone F11A3 map mi148, complete
             sequence
          Length = 93868

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    tgatgaagctgacggaggcg 49
             ||||||||||||||||||||
Sbjct: 85843 tgatgaagctgacggaggcg 85862

>gb|AY064662.1| Arabidopsis thaliana unknown protein (At2g20230; F11A3.22) mRNA,
          complete cds
          Length = 837

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 30 tgatgaagctgacggaggcg 49
          ||||||||||||||||||||
Sbjct: 57 tgatgaagctgacggaggcg 38

>gb|AC090744.5| Homo sapiens chromosome 11, clone RP11-660K15, complete sequence
          Length = 195434

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    gcctgagtttcttctttctt 158
              ||||||||||||||||||||
Sbjct: 145743 gcctgagtttcttctttctt 145724

>gb|AY054570.1| Arabidopsis thaliana Unknown protein (At2g20230; F11A3.22) mRNA,
           complete cds
          Length = 1118

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  tgatgaagctgacggaggcg 49
           ||||||||||||||||||||
Sbjct: 249 tgatgaagctgacggaggcg 230

>emb|BX820698.1|CNS0A8P6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH60ZD10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1289

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  tgatgaagctgacggaggcg 49
           ||||||||||||||||||||
Sbjct: 203 tgatgaagctgacggaggcg 184

>emb|BX819958.1|CNS0A8FN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS53ZH02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1079

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  tgatgaagctgacggaggcg 49
           ||||||||||||||||||||
Sbjct: 232 tgatgaagctgacggaggcg 213

>emb|BX821928.1|CNS0A870 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL85ZD08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1072

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  tgatgaagctgacggaggcg 49
           ||||||||||||||||||||
Sbjct: 265 tgatgaagctgacggaggcg 246

>emb|BX821343.1|CNS0A7XH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL35ZA01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1097

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  tgatgaagctgacggaggcg 49
           ||||||||||||||||||||
Sbjct: 218 tgatgaagctgacggaggcg 199

>gb|AC064860.6| Homo sapiens BAC clone RP11-343F11 from 2, complete sequence
          Length = 94893

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 126   ctcagatttctcagcctgagtttcttct 153
             ||||| ||||| ||||||||||||||||
Sbjct: 23578 ctcagctttctgagcctgagtttcttct 23605

>gb|AC006205.9| Homo sapiens 12 PAC RP5-1154L15 (Roswell Park Cancer Institute Human
             PAC Library) complete sequence
          Length = 120084

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   gttgccgtgagctatgatga 254
             ||||||||||||||||||||
Sbjct: 10817 gttgccgtgagctatgatga 10836

>gb|AC021054.28| Homo sapiens 12 BAC RP11-218M22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 174231

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    gttgccgtgagctatgatga 254
              ||||||||||||||||||||
Sbjct: 131817 gttgccgtgagctatgatga 131836

>gb|AY088475.1| Arabidopsis thaliana clone 6967 mRNA, complete sequence
          Length = 1272

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  tgatgaagctgacggaggcg 49
           ||||||||||||||||||||
Sbjct: 380 tgatgaagctgacggaggcg 361

>emb|AJ293984.1|RBL293984 Rice black streaked dwarf virus, segment 3
          Length = 3572

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 71   aaataactgaaaaggtttca 90
            ||||||||||||||||||||
Sbjct: 1244 aaataactgaaaaggtttca 1225

>gb|AF032344.1|AF032344 Propithecus verreauxi clone PRI7=16 Sifaka Alu
          Length = 243

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 gttgccgtgagctatgatga 254
           ||||||||||||||||||||
Sbjct: 197 gttgccgtgagctatgatga 216

>emb|BX294652.6| Mouse DNA sequence from clone RP23-254N16 on chromosome 2, complete
            sequence
          Length = 41854

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 142  tgagtttcttctttcttgac 161
            ||||||||||||||||||||
Sbjct: 3684 tgagtttcttctttcttgac 3703

>gb|AC134615.5| Mus musculus BAC clone RP23-148H3 from 8, complete sequence
          Length = 199454

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 195   agtcacagaatatttgtaagcctc 218
             ||||| ||||||||||||||||||
Sbjct: 31661 agtcatagaatatttgtaagcctc 31638

>emb|AL808137.4| Mouse DNA sequence from clone RP23-358G23 on chromosome 2, complete
            sequence
          Length = 199593

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 132  tttctcagcctgagtttctt 151
            ||||||||||||||||||||
Sbjct: 4341 tttctcagcctgagtttctt 4322

>emb|AL645640.14| Mouse DNA sequence from clone RP23-228G24 on chromosome 4, complete
             sequence
          Length = 91413

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   agaaacagcaggcacatgtg 319
             ||||||||||||||||||||
Sbjct: 31251 agaaacagcaggcacatgtg 31270


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,231,317
Number of Sequences: 3902068
Number of extensions: 3231317
Number of successful extensions: 70374
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70292
Number of HSP's gapped (non-prelim): 82
length of query: 352
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 330
effective length of database: 17,147,199,772
effective search space: 5658575924760
effective search space used: 5658575924760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)