ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd24l15 |
|---|---|
| Clone Library Name | barley_pub |
>SUFB_SHIFL (Q83KW2) Protein sufB| Length = 495 Score = 177 bits (450), Expect(3) = 1e-57 Identities = 87/144 (60%), Positives = 111/144 (77%) Frame = +2 Query: 149 KYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYR 328 KYPS L GD+++GEFYSVALT +QQADTGTKMIH GKN++S IISKGISAG S+N YR Sbjct: 328 KYPSCILRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYR 387 Query: 329 GLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFY 508 GLV++ A NA N +QCDS+LIG A+T+P ++ S ++EHEA+TS+IGEDQLFY Sbjct: 388 GLVKIMPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFY 447 Query: 509 FQQRGIDHEKAVAAMIGGFCRAVF 580 QRGI E A++ ++ GFC+ VF Sbjct: 448 CLQRGISEEDAISMIVNGFCKDVF 471 Score = 62.8 bits (151), Expect(3) = 1e-57 Identities = 27/38 (71%), Positives = 29/38 (76%) Frame = +1 Query: 49 GGIYNFVTKRGRCKGRGSKISWTQVETGSAITWXVPKC 162 GGI NFVTKR C+G SK+SWTQ ETGSAITW P C Sbjct: 295 GGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSC 332 Score = 23.5 bits (49), Expect(3) = 1e-57 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +3 Query: 3 YSTVQXWYAGD 35 YSTVQ W+ GD Sbjct: 281 YSTVQNWFPGD 291
>SUFB_ECOLI (P77522) Protein sufB| Length = 495 Score = 177 bits (450), Expect(3) = 1e-57 Identities = 87/144 (60%), Positives = 111/144 (77%) Frame = +2 Query: 149 KYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYR 328 KYPS L GD+++GEFYSVALT +QQADTGTKMIH GKN++S IISKGISAG S+N YR Sbjct: 328 KYPSCILRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYR 387 Query: 329 GLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFY 508 GLV++ A NA N +QCDS+LIG A+T+P ++ S ++EHEA+TS+IGEDQLFY Sbjct: 388 GLVKIMPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFY 447 Query: 509 FQQRGIDHEKAVAAMIGGFCRAVF 580 QRGI E A++ ++ GFC+ VF Sbjct: 448 CLQRGISEEDAISMIVNGFCKDVF 471 Score = 62.8 bits (151), Expect(3) = 1e-57 Identities = 27/38 (71%), Positives = 29/38 (76%) Frame = +1 Query: 49 GGIYNFVTKRGRCKGRGSKISWTQVETGSAITWXVPKC 162 GGI NFVTKR C+G SK+SWTQ ETGSAITW P C Sbjct: 295 GGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSC 332 Score = 23.5 bits (49), Expect(3) = 1e-57 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +3 Query: 3 YSTVQXWYAGD 35 YSTVQ W+ GD Sbjct: 281 YSTVQNWFPGD 291
>Y074_SYNY3 (Q55790) Hypothetical UPF0051 protein slr0074| Length = 480 Score = 206 bits (523), Expect = 5e-53 Identities = 107/177 (60%), Positives = 127/177 (71%) Frame = +2 Query: 47 KGAFTILSLRGGAARGVARKSHGHRLRQGQQSPGKYPSVELVGDDTVGEFYSVALTKDYQ 226 KG + G +GV K ++ G KYPS LVGD++VGEFYS+ALT + Q Sbjct: 279 KGGIYNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSCVLVGDNSVGEFYSIALTNNKQ 338 Query: 227 QADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDK 406 QADTGTKMIH GKN+RS IISKGISAG S N YRGLV+M A+ A N SQCDS+LIGD+ Sbjct: 339 QADTGTKMIHIGKNTRSIIISKGISAGNSANSYRGLVKMGPKAQGARNYSQCDSMLIGDR 398 Query: 407 AAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAV 577 AAANT+P IQV + +VEHEASTSKIGEDQLFYF QRGI E AV+ ++ GFC+ V Sbjct: 399 AAANTFPYIQVDNNTAKVEHEASTSKIGEDQLFYFAQRGISEEDAVSMLVSGFCKDV 455 Score = 76.3 bits (186), Expect = 6e-14 Identities = 34/40 (85%), Positives = 34/40 (85%) Frame = +1 Query: 43 GKGGIYNFVTKRGRCKGRGSKISWTQVETGSAITWXVPKC 162 GKGGIYNFVTKRG CKG SKISWTQVETGSAITW P C Sbjct: 278 GKGGIYNFVTKRGLCKGVNSKISWTQVETGSAITWKYPSC 317 Score = 35.0 bits (79), Expect = 0.16 Identities = 16/30 (53%), Positives = 18/30 (60%) Frame = +3 Query: 3 YSTVQXWYAGDEXGQRGHLQFCH*EGALQG 92 YSTVQ WYAGDE G+ G F G +G Sbjct: 265 YSTVQNWYAGDENGKGGIYNFVTKRGLCKG 294
>YCF24_CYAPA (P48260) Hypothetical UPF0051 protein ycf24| Length = 486 Score = 200 bits (508), Expect = 3e-51 Identities = 104/177 (58%), Positives = 130/177 (73%) Frame = +2 Query: 50 GAFTILSLRGGAARGVARKSHGHRLRQGQQSPGKYPSVELVGDDTVGEFYSVALTKDYQQ 229 G + ++ RG A G K ++ G KYPS L+GD+++GEFYSVALT YQQ Sbjct: 287 GIYNFVTKRGLCA-GKNSKISWTQVETGSAITWKYPSCVLLGDNSIGEFYSVALTNRYQQ 345 Query: 230 ADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKA 409 ADTGTKMIH GKN+RSRIISKGISAG S+N YRGLV++ A A N SQCDSLLIGD + Sbjct: 346 ADTGTKMIHIGKNTRSRIISKGISAGHSQNSYRGLVKIGPKAVGARNYSQCDSLLIGDNS 405 Query: 410 AANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVF 580 ANT+P +Q+ + +VEHEASTSKIGE+Q+FYF QRGI+ E+A++ +I GFCR VF Sbjct: 406 QANTFPHLQIKNPTAKVEHEASTSKIGEEQIFYFLQRGINAEEAISLIISGFCREVF 462 Score = 75.9 bits (185), Expect = 8e-14 Identities = 33/40 (82%), Positives = 34/40 (85%) Frame = +1 Query: 43 GKGGIYNFVTKRGRCKGRGSKISWTQVETGSAITWXVPKC 162 GKGGIYNFVTKRG C G+ SKISWTQVETGSAITW P C Sbjct: 284 GKGGIYNFVTKRGLCAGKNSKISWTQVETGSAITWKYPSC 323 Score = 34.3 bits (77), Expect = 0.27 Identities = 16/30 (53%), Positives = 17/30 (56%) Frame = +3 Query: 3 YSTVQXWYAGDEXGQRGHLQFCH*EGALQG 92 YSTVQ WYAGDE G+ G F G G Sbjct: 271 YSTVQNWYAGDENGKGGIYNFVTKRGLCAG 300
>YCF24_GUITH (O78473) Hypothetical UPF0051 protein ycf24| Length = 483 Score = 198 bits (503), Expect = 1e-50 Identities = 105/177 (59%), Positives = 128/177 (72%) Frame = +2 Query: 50 GAFTILSLRGGAARGVARKSHGHRLRQGQQSPGKYPSVELVGDDTVGEFYSVALTKDYQQ 229 G + ++ RG A G + K ++ G KYPS LVG+D+VGEFYSVALT +YQQ Sbjct: 284 GIYNFVTKRGLCA-GKSSKISWTQVETGSAITWKYPSCILVGEDSVGEFYSVALTNNYQQ 342 Query: 230 ADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKA 409 ADTGTKMIH G+ S+SRIISKGISAG S+N YRG V++N A + N+SQCDS+LIG + Sbjct: 343 ADTGTKMIHVGRGSKSRIISKGISAGYSKNTYRGQVKININALGSINNSQCDSMLIGPYS 402 Query: 410 AANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVF 580 ANTYP IQV RVEHEASTSKI E+QLFYF QRGI E+A++ +I GFCR VF Sbjct: 403 QANTYPYIQVSNAMSRVEHEASTSKIEEEQLFYFLQRGISVEQAISLLISGFCRDVF 459 Score = 75.9 bits (185), Expect = 8e-14 Identities = 33/40 (82%), Positives = 34/40 (85%) Frame = +1 Query: 43 GKGGIYNFVTKRGRCKGRGSKISWTQVETGSAITWXVPKC 162 GKGGIYNFVTKRG C G+ SKISWTQVETGSAITW P C Sbjct: 281 GKGGIYNFVTKRGLCAGKSSKISWTQVETGSAITWKYPSC 320 Score = 30.8 bits (68), Expect = 3.0 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +3 Query: 3 YSTVQXWYAGDEXGQRGHLQFCH*EGALQG 92 YSTVQ WY+GD G+ G F G G Sbjct: 268 YSTVQNWYSGDTNGKGGIYNFVTKRGLCAG 297
>YCF24_ODOSI (P49530) Hypothetical UPF0051 protein ycf24 (ORF486)| Length = 486 Score = 193 bits (490), Expect = 3e-49 Identities = 103/177 (58%), Positives = 125/177 (70%) Frame = +2 Query: 50 GAFTILSLRGGAARGVARKSHGHRLRQGQQSPGKYPSVELVGDDTVGEFYSVALTKDYQQ 229 G + ++ RG A G K ++ G KYPS LVGD GEFYSVALT +YQQ Sbjct: 287 GIYNFVTKRGLCA-GSNSKISWTQVETGSNITWKYPSCLLVGDKAKGEFYSVALTNNYQQ 345 Query: 230 ADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKA 409 ADTG+KMIH GKN+RSRI+SKGISAG S+N YRGLV +++ A A N SQCDSLLIG+ + Sbjct: 346 ADTGSKMIHVGKNTRSRIVSKGISAGNSKNTYRGLVNISNKAIGARNYSQCDSLLIGNLS 405 Query: 410 AANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVF 580 ANT+P I V + ++EHEASTSKIGE+Q+FYF QRGI EK V MI GFC+ VF Sbjct: 406 NANTFPFISVQNPTAKIEHEASTSKIGEEQIFYFLQRGIPIEKGVELMISGFCQEVF 462 Score = 70.9 bits (172), Expect = 3e-12 Identities = 31/40 (77%), Positives = 32/40 (80%) Frame = +1 Query: 43 GKGGIYNFVTKRGRCKGRGSKISWTQVETGSAITWXVPKC 162 G+GGIYNFVTKRG C G SKISWTQVETGS ITW P C Sbjct: 284 GEGGIYNFVTKRGLCAGSNSKISWTQVETGSNITWKYPSC 323 Score = 31.2 bits (69), Expect = 2.3 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +3 Query: 3 YSTVQXWYAGDEXGQRGHLQFCH*EGALQGA 95 YSTVQ WYAG+ G+ G F G G+ Sbjct: 271 YSTVQNWYAGNNYGEGGIYNFVTKRGLCAGS 301
>YCF24_PORPU (P51240) Hypothetical UPF0051 protein ycf24 (ORF487)| Length = 487 Score = 191 bits (484), Expect = 2e-48 Identities = 99/178 (55%), Positives = 124/178 (69%) Frame = +2 Query: 47 KGAFTILSLRGGAARGVARKSHGHRLRQGQQSPGKYPSVELVGDDTVGEFYSVALTKDYQ 226 KG + G G K ++ G KYP L GD++ GEFYSVALT +YQ Sbjct: 286 KGGIYNFVTKRGLCSGKNSKISWTQVETGSAITWKYPGCILAGDNSQGEFYSVALTNNYQ 345 Query: 227 QADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDK 406 +ADTGTKMIH G N++S+IISKGISAGKS+N YRGLV++ + N+ N SQCDSLLIG Sbjct: 346 EADTGTKMIHIGNNTKSKIISKGISAGKSKNSYRGLVKIGPQSFNSRNYSQCDSLLIGQS 405 Query: 407 AAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVF 580 + ANT+P IQV + +VEHEASTSKI EDQ+FYF QRGI+ E++V+ MI GFC+ VF Sbjct: 406 SQANTFPYIQVQNPTAKVEHEASTSKISEDQIFYFLQRGINLEESVSLMISGFCKDVF 463 Score = 75.5 bits (184), Expect = 1e-13 Identities = 33/40 (82%), Positives = 34/40 (85%) Frame = +1 Query: 43 GKGGIYNFVTKRGRCKGRGSKISWTQVETGSAITWXVPKC 162 GKGGIYNFVTKRG C G+ SKISWTQVETGSAITW P C Sbjct: 285 GKGGIYNFVTKRGLCSGKNSKISWTQVETGSAITWKYPGC 324 Score = 31.2 bits (69), Expect = 2.3 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +3 Query: 3 YSTVQXWYAGDEXGQRGHLQFCH*EGALQG 92 YSTVQ WYAG++ G+ G F G G Sbjct: 272 YSTVQNWYAGNKDGKGGIYNFVTKRGLCSG 301
>YCF24_GALSU (P35912) Hypothetical UPF0051 protein in atpA 3'region (ORF X)| (Fragment) Length = 221 Score = 179 bits (455), Expect(2) = 2e-48 Identities = 95/177 (53%), Positives = 123/177 (69%) Frame = +2 Query: 50 GAFTILSLRGGAARGVARKSHGHRLRQGQQSPGKYPSVELVGDDTVGEFYSVALTKDYQQ 229 G + ++ RG A ++ S ++ G KYPS L G+++ GEFYSVALT YQQ Sbjct: 22 GIYNFVTKRGLCAESNSKISWT-QVETGSAITWKYPSCILAGNNSKGEFYSVALTNHYQQ 80 Query: 230 ADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKA 409 ADTG+KMIH GKNSRS+IISKGIS G S N YRG V+++ A A N SQCDSLLIG+ + Sbjct: 81 ADTGSKMIHIGKNSRSKIISKGISTGNSINSYRGKVKVSLNASRARNYSQCDSLLIGNSS 140 Query: 410 AANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVF 580 ANT+P I+V S +EHEAS SKI E++LFYF QRGI E+A++ ++ GFC+ VF Sbjct: 141 EANTFPYIEVYNRSSIIEHEASISKINEEKLFYFMQRGISIEEAISLIVSGFCKEVF 197 Score = 71.6 bits (174), Expect = 2e-12 Identities = 32/40 (80%), Positives = 32/40 (80%) Frame = +1 Query: 43 GKGGIYNFVTKRGRCKGRGSKISWTQVETGSAITWXVPKC 162 GKGGIYNFVTKRG C SKISWTQVETGSAITW P C Sbjct: 19 GKGGIYNFVTKRGLCAESNSKISWTQVETGSAITWKYPSC 58 Score = 32.3 bits (72), Expect(2) = 2e-48 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +3 Query: 3 YSTVQXWYAGDEXGQRGHLQF 65 YSTVQ WY+GDE G+ G F Sbjct: 6 YSTVQNWYSGDENGKGGIYNF 26
>YCF24_ANTSP (Q02857) Hypothetical UPF0051 protein in atpA 3'region (ORF 3)| (Fragment) Length = 297 Score = 175 bits (443), Expect(2) = 3e-47 Identities = 87/153 (56%), Positives = 113/153 (73%) Frame = +2 Query: 119 RLRQGQQSPGKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGI 298 ++ G KYPS L G +++GEF S+ALT +YQQADTG+KMIH GKN++SRI+SKGI Sbjct: 120 QVETGSAITWKYPSCILAGHNSIGEFSSIALTNNYQQADTGSKMIHIGKNTKSRILSKGI 179 Query: 299 SAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEAST 478 SAG S N YRGLV++ A + N SQCDSLL+ + + ANT+P IQ ++EHEAST Sbjct: 180 SAGYSANSYRGLVKIGPKAHYSRNYSQCDSLLLSNTSKANTFPYIQAQNPYTKIEHEAST 239 Query: 479 SKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAV 577 SKIGE+Q+FYF QRGI+ E A++ MI GFC+ V Sbjct: 240 SKIGEEQIFYFLQRGINLENAISLMISGFCKEV 272 Score = 72.0 bits (175), Expect = 1e-12 Identities = 32/41 (78%), Positives = 33/41 (80%) Frame = +1 Query: 40 KGKGGIYNFVTKRGRCKGRGSKISWTQVETGSAITWXVPKC 162 KG+GGIYNFVTKRG C G SKI WTQVETGSAITW P C Sbjct: 94 KGQGGIYNFVTKRGICIGNNSKILWTQVETGSAITWKYPSC 134 Score = 33.1 bits (74), Expect(2) = 3e-47 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = +3 Query: 3 YSTVQXWYAGDEXGQRGHLQF 65 YSTVQ WYAG+E GQ G F Sbjct: 82 YSTVQNWYAGNEKGQGGIYNF 102
>YCF24_CYACA (Q9TLX2) Hypothetical UPF0051 protein ycf24| Length = 483 Score = 165 bits (417), Expect = 1e-40 Identities = 86/176 (48%), Positives = 118/176 (67%) Frame = +2 Query: 50 GAFTILSLRGGAARGVARKSHGHRLRQGQQSPGKYPSVELVGDDTVGEFYSVALTKDYQQ 229 G + ++ RG +G K +L G KYPS L G + GEF+SV LT + Q+ Sbjct: 284 GVYNFVTKRG-LCQGENSKISWTQLETGSAITWKYPSCLLKGKRSTGEFFSVTLTNNAQE 342 Query: 230 ADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKA 409 ADTGTKM+H G+ S+S +ISKGIS G S+N YRGLV+++ A + N SQCDSLLIG + Sbjct: 343 ADTGTKMLHFGRQSKSLVISKGISGGVSKNTYRGLVKISGSAIYSDNRSQCDSLLIGKGS 402 Query: 410 AANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAV 577 +NTYP + V + +VEHEA S+IGE+Q+FYFQQRGI+ E+A+ ++ GFC+ V Sbjct: 403 ESNTYPNLHVHNSLSKVEHEAFVSRIGEEQIFYFQQRGINIEEALNMIVSGFCQDV 458 Score = 74.7 bits (182), Expect = 2e-13 Identities = 31/41 (75%), Positives = 35/41 (85%) Frame = +1 Query: 40 KGKGGIYNFVTKRGRCKGRGSKISWTQVETGSAITWXVPKC 162 KG+GG+YNFVTKRG C+G SKISWTQ+ETGSAITW P C Sbjct: 280 KGEGGVYNFVTKRGLCQGENSKISWTQLETGSAITWKYPSC 320 Score = 33.1 bits (74), Expect = 0.60 Identities = 15/30 (50%), Positives = 17/30 (56%) Frame = +3 Query: 3 YSTVQXWYAGDEXGQRGHLQFCH*EGALQG 92 YSTVQ WYAG+ G+ G F G QG Sbjct: 268 YSTVQNWYAGNNKGEGGVYNFVTKRGLCQG 297
>Y1496_MYCBO (P67126) Hypothetical UPF0051 protein Mb1496 [Contains: Endonuclease| PI-MtuHIIP (EC 3.1.-.-) (Mtu pps1 intein)] Length = 846 Score = 122 bits (305), Expect(2) = 3e-30 Identities = 58/149 (38%), Positives = 90/149 (60%) Frame = +2 Query: 131 GQQSPGKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGK 310 G + KYP+V + G+ GE SVA + Q DTG KM+H N+ S I+SK ++ G Sbjct: 673 GSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNIVSKSVARGG 732 Query: 311 SRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIG 490 R YRGLVQ+N GA + +S +CD+LL+ + ++TYP + + + HEA+ SK+ Sbjct: 733 GRTSYRGLVQVNKGAHGSRSSVKCDALLVDTVSRSDTYPYVDIREDDVTMGHEATVSKVS 792 Query: 491 EDQLFYFQQRGIDHEKAVAAMIGGFCRAV 577 E+QLFY RG+ ++A+A ++ GF + Sbjct: 793 ENQLFYLMSRGLTEDEAMAMVVRGFVEPI 821 Score = 29.3 bits (64), Expect(2) = 3e-30 Identities = 14/50 (28%), Positives = 21/50 (42%) Frame = +1 Query: 7 PPCXIGMLVMXKGKGGIYNFVTKRGRCKGRGSKISWTQVETGSAITWXVP 156 P + + +YN VTKR R + G+ + W GS +T P Sbjct: 633 PHARVRYTTIQNWSNNVYNLVTKRARAEA-GATMEWIDGNIGSKVTMKYP 681
>Y1461_MYCTU (P67125) Hypothetical UPF0051 protein Rv1461/MT1508 [Contains:| Endonuclease PI-MtuHIIP (EC 3.1.-.-) (Mtu pps1 intein)] Length = 846 Score = 122 bits (305), Expect(2) = 3e-30 Identities = 58/149 (38%), Positives = 90/149 (60%) Frame = +2 Query: 131 GQQSPGKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGK 310 G + KYP+V + G+ GE SVA + Q DTG KM+H N+ S I+SK ++ G Sbjct: 673 GSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNIVSKSVARGG 732 Query: 311 SRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIG 490 R YRGLVQ+N GA + +S +CD+LL+ + ++TYP + + + HEA+ SK+ Sbjct: 733 GRTSYRGLVQVNKGAHGSRSSVKCDALLVDTVSRSDTYPYVDIREDDVTMGHEATVSKVS 792 Query: 491 EDQLFYFQQRGIDHEKAVAAMIGGFCRAV 577 E+QLFY RG+ ++A+A ++ GF + Sbjct: 793 ENQLFYLMSRGLTEDEAMAMVVRGFVEPI 821 Score = 29.3 bits (64), Expect(2) = 3e-30 Identities = 14/50 (28%), Positives = 21/50 (42%) Frame = +1 Query: 7 PPCXIGMLVMXKGKGGIYNFVTKRGRCKGRGSKISWTQVETGSAITWXVP 156 P + + +YN VTKR R + G+ + W GS +T P Sbjct: 633 PHARVRYTTIQNWSNNVYNLVTKRARAEA-GATMEWIDGNIGSKVTMKYP 681
>Y593_MYCLE (Q49689) Hypothetical UPF0051 protein ML0593 [Contains: Mle pps1| intein] Length = 869 Score = 121 bits (304), Expect(2) = 7e-30 Identities = 58/149 (38%), Positives = 90/149 (60%) Frame = +2 Query: 131 GQQSPGKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGK 310 G + KYP+V + G+ GE SVA + Q DTG KM+H N+ S I+SK ++ G Sbjct: 696 GSKVTMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKMLHLASNTSSNIVSKSVARGG 755 Query: 311 SRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIG 490 R YRGLVQ+N GA + +S +CD+LL+ + ++TYP + + + HEA+ SK+ Sbjct: 756 GRTSYRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKVS 815 Query: 491 EDQLFYFQQRGIDHEKAVAAMIGGFCRAV 577 E+QLFY RG+ ++A+A ++ GF + Sbjct: 816 ENQLFYLMSRGLAEDEAMAMVVRGFVEPI 844 Score = 28.5 bits (62), Expect(2) = 7e-30 Identities = 14/50 (28%), Positives = 21/50 (42%) Frame = +1 Query: 7 PPCXIGMLVMXKGKGGIYNFVTKRGRCKGRGSKISWTQVETGSAITWXVP 156 P + + +YN VTKR R + G+ + W GS +T P Sbjct: 656 PHARVRYTTIQNWSNNVYNLVTKRARVE-TGATMEWIDGNIGSKVTMKYP 704
>Y1385_PYRHO (O50093) Hypothetical UPF0051 protein PH1385| Length = 446 Score = 67.4 bits (163), Expect = 3e-11 Identities = 42/132 (31%), Positives = 63/132 (47%) Frame = +2 Query: 170 VGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNS 349 VG++ E V L + D G +M +G+ R SK + +S RG + + Sbjct: 289 VGENGYVELNGVILGQKDWYIDLGGEMHLQGEGGRGINASKSVIMDESTVITRGKIVAEA 348 Query: 350 GAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGID 529 + S CD+LL+ DKA TYP + + HEA+ KI E++LFY RG+ Sbjct: 349 KKTKGHIS--CDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIKEEELFYLMSRGLS 406 Query: 530 HEKAVAAMIGGF 565 EKA ++ GF Sbjct: 407 EEKATQLIVKGF 418
>Y2365_ARCFU (O30305) Hypothetical UPF0051 protein AF2365| Length = 369 Score = 67.0 bits (162), Expect = 4e-11 Identities = 39/138 (28%), Positives = 70/138 (50%) Frame = +2 Query: 152 YPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRG 331 YP+ V D F SV + + D+G++ + G+NSR+ IIS+ IS G + RG Sbjct: 208 YPTA-YVEKDATAIFNSVIVALEGSVVDSGSRAVLMGENSRAEIISRTISKG-GKIIARG 265 Query: 332 LVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYF 511 + A +C L++ + + P ++ + + HEA+ KI E+ +FY Sbjct: 266 --HIIGDAPEVKGHLECKGLMLSESGLIDAIPELEARYPNVELSHEAAIGKIAEEGIFYL 323 Query: 512 QQRGIDHEKAVAAMIGGF 565 RG+ ++A++A++ GF Sbjct: 324 MSRGLSRDEAISAIVRGF 341
>Y1150_METTH (O27218) Hypothetical UPF0051 protein MTH1150| Length = 410 Score = 62.8 bits (151), Expect = 7e-10 Identities = 33/138 (23%), Positives = 67/138 (48%) Frame = +2 Query: 152 YPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRG 331 YP+ G+++ F S+ + D G+++I +G+ S + ++S+ +S S+ RG Sbjct: 248 YPTAYCTGENSRVVFQSILGGQKDSVLDMGSRVILEGRGSSAEMVSRAVSKDSSQIYSRG 307 Query: 332 LVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYF 511 + +C L++ D + P ++ T + HEA+ KI E+++ Y Sbjct: 308 --HLAGRVPEVKGHLECHGLVLSDDSMIYAVPELEGSATELEMSHEAAVGKIAEEEVMYL 365 Query: 512 QQRGIDHEKAVAAMIGGF 565 RG+ E+A + ++ GF Sbjct: 366 TSRGLTEEEAASMIVRGF 383
>YB50_METTW (Q50519) Hypothetical UPF0051 protein MTH1150 homolog (ORF2)| Length = 410 Score = 61.2 bits (147), Expect = 2e-09 Identities = 32/138 (23%), Positives = 67/138 (48%) Frame = +2 Query: 152 YPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRG 331 YP+ G+++ F S+ + D G+++I +G+ S + ++S+ +S S+ RG Sbjct: 248 YPTAYCTGENSRVVFQSILGGQKDSVLDMGSRVILEGRGSSAEMVSRAVSKDASQIYSRG 307 Query: 332 LVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYF 511 + +C L++ D + P ++ T + HEA+ KI E+++ Y Sbjct: 308 --HLAGRVPEVKGHLECHGLVLSDDSMIYAVPELEGSATELEMSHEAAVGKIAEEEVMYL 365 Query: 512 QQRGIDHEKAVAAMIGGF 565 RG+ ++A + ++ GF Sbjct: 366 TSRGLTEDEAASMIVRGF 383
>SUFD_ECOLI (P77689) Protein sufD| Length = 423 Score = 61.2 bits (147), Expect = 2e-09 Identities = 37/142 (26%), Positives = 68/142 (47%) Frame = +2 Query: 158 SVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLV 337 S +L G+++ S+A+ + DT T + H SR + K I + K R + GL+ Sbjct: 258 STQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLI 317 Query: 338 QMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQ 517 + A ++LL+G A +T P +++ + H A+ +I ++Q+FY + Sbjct: 318 NVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQIFYLRS 377 Query: 518 RGIDHEKAVAAMIGGFCRAVFE 583 RGI+ + A +I F + E Sbjct: 378 RGINQQDAQQMIIYAFAAELTE 399
>Y076_SYNY3 (Q55792) Hypothetical UPF0051 protein slr0076| Length = 453 Score = 45.4 bits (106), Expect = 1e-04 Identities = 29/134 (21%), Positives = 61/134 (45%) Frame = +2 Query: 182 TVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAEN 361 T EF ++ + Q +DT + + + + + K I ++ + G V + A+ Sbjct: 300 TKTEFLALTILAGRQVSDTHSTIALNHPHGATNQLHKCIVDEYAQAVFSGKVLVPQAAQL 359 Query: 362 AYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKA 541 +L++ KA NT P +Q+ + + H A+ S++ D++FY + RG++ A Sbjct: 360 TNAQQLNRNLVLSSKARINTKPELQITADNVKCSHGATISQLEADEVFYLRSRGLNDYDA 419 Query: 542 VAAMIGGFCRAVFE 583 +I F + + Sbjct: 420 RHLLIDAFAGEILD 433
>Y1497_MYCBO (P59973) Hypothetical UPF0051 protein Mb1497| Length = 397 Score = 38.5 bits (88), Expect = 0.014 Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 10/145 (6%) Frame = +2 Query: 161 VELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGK-------SRN 319 V G E + D Q ++ + H + +S ++ KG G + Sbjct: 218 VRFCGAGGDAELLGLYFADDGQHLESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHT 277 Query: 320 CYRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVE---HEASTSKIG 490 + G V + + A +L++ D A A++ P +++ +G + H ++T + Sbjct: 278 VWVGDVLIRAQATGTDTFEVNRNLVLTDGARADSVPNLEI--ETGEIVGAGHASATGRFD 335 Query: 491 EDQLFYFQQRGIDHEKAVAAMIGGF 565 ++QLFY + RGI +A ++ GF Sbjct: 336 DEQLFYLRSRGIPEAQARRLVVRGF 360
>Y1462_MYCTU (O53153) Hypothetical UPF0051 protein Rv1462/MT1509| Length = 397 Score = 38.5 bits (88), Expect = 0.014 Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 10/145 (6%) Frame = +2 Query: 161 VELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGK-------SRN 319 V G E + D Q ++ + H + +S ++ KG G + Sbjct: 218 VRFCGAGGDAELLGLYFADDGQHLESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHT 277 Query: 320 CYRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVE---HEASTSKIG 490 + G V + + A +L++ D A A++ P +++ +G + H ++T + Sbjct: 278 VWVGDVLIRAQATGTDTFEVNRNLVLTDGARADSVPNLEI--ETGEIVGAGHASATGRFD 335 Query: 491 EDQLFYFQQRGIDHEKAVAAMIGGF 565 ++QLFY + RGI +A ++ GF Sbjct: 336 DEQLFYLRSRGIPEAQARRLVVRGF 360
>Y594_MYCLE (Q49682) Hypothetical UPF0051 protein ML0594| Length = 392 Score = 36.6 bits (83), Expect = 0.055 Identities = 29/144 (20%), Positives = 60/144 (41%), Gaps = 8/144 (5%) Frame = +2 Query: 158 SVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGK-------SR 316 +V G E + D Q ++ + H + +S ++ KG G + Sbjct: 214 NVRFSGPGGDAELLGLYFADDGQHLESRLLVDHAHPDCKSNVLYKGALQGDPVSSRPDAH 273 Query: 317 NCYRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTS-GRVEHEASTSKIGE 493 + G V ++ A +L++ + A++ P +++ H ++T + + Sbjct: 274 TVWVGDVLIHPEATGTDTFEVNRNLVLTNGVRADSVPNLEIETDEIVGAGHASATGRFDD 333 Query: 494 DQLFYFQQRGIDHEKAVAAMIGGF 565 +QLFY + RGI E+A ++ GF Sbjct: 334 EQLFYLRSRGIGEEQARRLLVRGF 357
>Y034_METJA (Q60349) Hypothetical UPF0051 protein MJ0034| Length = 316 Score = 36.2 bits (82), Expect = 0.071 Identities = 25/119 (21%), Positives = 56/119 (47%) Frame = +2 Query: 206 ALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCD 385 A+ +D + + K+ G+N++ I S+G + S+ + +++ A + C Sbjct: 198 AIKEDVVKVNEVVKL--NGENAKCIIKSRGAAMDNSKISLK--LKIEGNAPYSKGHIDCA 253 Query: 386 SLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGG 562 ++ G+ A + P + V R+ HEA+ + + QL +G+D ++A ++ G Sbjct: 254 EIVKGN-AEVESIPIVVVRDDKARITHEAAIGSVDKKQLETLMAKGLDEDEATEIIVKG 311
>MRC2_RAT (Q4TU93) Macrophage mannose receptor 2 precursor (Endocytic| receptor 180) (CD280 antigen) Length = 1480 Score = 31.6 bits (70), Expect = 1.8 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 6/81 (7%) Frame = +2 Query: 350 GAENAYNSSQCDSLL--IGDKAAANTYPTIQV--GCTSGRVEHEASTSKIGEDQLFYFQQ 517 G E +N S C+ L I KA + T + GC G H S +GEDQ+ Y Sbjct: 485 GPEGRWNDSPCNQSLPSICKKAGRLSQGTAEEDHGCRKGWTWHSPSCYWLGEDQVIYSDA 544 Query: 518 RGI--DHEKAVAAMIGGFCRA 574 R + DH + + F +A Sbjct: 545 RRLCTDHGSQLVTITNRFEQA 565
>Y779_LACPL (Q88YI4) UPF0042 protein lp_0779| Length = 294 Score = 31.2 bits (69), Expect = 2.3 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = +2 Query: 374 SQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGE 493 S +S++ G +A + TI +GCT G+ A T +IGE Sbjct: 230 SMLESIMPGYEAEGKSSLTIAIGCTGGQHRSVALTQRIGE 269
>Y3349_STRCO (Q9X8H2) Hypothetical protein SCO3349| Length = 271 Score = 30.0 bits (66), Expect = 5.1 Identities = 18/57 (31%), Positives = 25/57 (43%) Frame = +1 Query: 157 KCGAGWGRHRWRVLLGSAD*GLPAGRYRDKDDPQGEEFTQPDYIQGYLSGEVKELLP 327 +C W RW + GS G+ AGR D G F+ D + ++G V L P Sbjct: 47 RCDLTWLTSRWNCIFGSGCQGIQAGRADDGCCSLGAHFSDED-DEKRVAGHVARLTP 102
>NEUV_CHICK (P24787) Vasotocin-neurophysin VT precursor [Contains: Vasotocin| (VT); Neurophysin VT] Length = 161 Score = 30.0 bits (66), Expect = 5.1 Identities = 14/43 (32%), Positives = 17/43 (39%) Frame = +2 Query: 260 GKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDS 388 G +R R GI G CY G + AE Y S C + Sbjct: 45 GPGNRGRCFGPGICCGAELGCYLGTAETRRCAEEDYMPSPCQA 87
>M2GD_MOUSE (Q9DBT9) Dimethylglycine dehydrogenase, mitochondrial precursor (EC| 1.5.99.2) (ME2GLYDH) Length = 869 Score = 30.0 bits (66), Expect = 5.1 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 6/57 (10%) Frame = +2 Query: 65 LSLRGGAARGVARKSHGHRLRQGQQSPGKYP------SVELVGDDTVGEFYSVALTK 217 L LRG A RG R+ LR+GQ+SP P ++G VG + L K Sbjct: 7 LRLRGLALRGSPRRPSSAGLREGQESPASPPEWKDRAETVIIGGGCVGVSLAYHLAK 63
>MRC2_MOUSE (Q64449) Macrophage mannose receptor 2 precursor (Lectin lambda)| (CD280 antigen) Length = 1479 Score = 29.6 bits (65), Expect = 6.7 Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 6/81 (7%) Frame = +2 Query: 350 GAENAYNSSQCDSLL--IGDKAAANTYPTIQV--GCTSGRVEHEASTSKIGEDQLFYFQQ 517 G E +N S C+ L I KA + + GC G H S +GEDQ+ Y Sbjct: 485 GPEGRWNDSPCNQSLPSICKKAGRLSQGAAEEDHGCRKGWTWHSPSCYWLGEDQVIYSDA 544 Query: 518 RGI--DHEKAVAAMIGGFCRA 574 R + DH + + F +A Sbjct: 545 RRLCTDHGSQLVTITNRFEQA 565
>MRC2_HUMAN (Q9UBG0) Macrophage mannose receptor 2 precursor (Urokinase| receptor-associated protein) (Endocytic receptor 180) (CD280 antigen) Length = 1479 Score = 29.6 bits (65), Expect = 6.7 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 6/81 (7%) Frame = +2 Query: 350 GAENAYNSSQCDSLL--IGDKAAANTYPTIQV--GCTSGRVEHEASTSKIGEDQLFYFQQ 517 G E +N S C+ L I KA + + GC G H S +GEDQ+ Y + Sbjct: 486 GPEGRWNDSPCNQSLPSICKKAGQLSQGAAEEDHGCRKGWTWHSPSCYWLGEDQVTYSEA 545 Query: 518 RGI--DHEKAVAAMIGGFCRA 574 R + DH + + F +A Sbjct: 546 RRLCTDHGSQLVTITNRFEQA 566
>ILVC_NEIMB (Q9JYI2) Ketol-acid reductoisomerase (EC 1.1.1.86)| (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) Length = 337 Score = 29.6 bits (65), Expect = 6.7 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = +2 Query: 95 VARKSHGHRLRQGQQSPGKYPSVELVGDDTVGEFYSVALTKDYQQADTGTK 247 VA K GH +R + G PS+ V D G+ +AL+ Y A+ GTK Sbjct: 126 VAPKGPGHTVRSEYKRGGGVPSLIAVYQDNSGKAKDIALS--YAAANGGTK 174
>ILVC_NEIMA (Q9JTI3) Ketol-acid reductoisomerase (EC 1.1.1.86)| (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) Length = 337 Score = 29.6 bits (65), Expect = 6.7 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = +2 Query: 95 VARKSHGHRLRQGQQSPGKYPSVELVGDDTVGEFYSVALTKDYQQADTGTK 247 VA K GH +R + G PS+ V D G+ +AL+ Y A+ GTK Sbjct: 126 VAPKGPGHTVRSEYKRGGGVPSLIAVYQDNSGKAKDIALS--YAAANGGTK 174
>ILVC_NEIG1 (Q5F7E5) Ketol-acid reductoisomerase (EC 1.1.1.86)| (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) Length = 337 Score = 29.6 bits (65), Expect = 6.7 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = +2 Query: 95 VARKSHGHRLRQGQQSPGKYPSVELVGDDTVGEFYSVALTKDYQQADTGTK 247 VA K GH +R + G PS+ V D G+ +AL+ Y A+ GTK Sbjct: 126 VAPKGPGHTVRSEYKRGGGVPSLIAVYQDNSGKAKDIALS--YAAANGGTK 174
>YR705_MIMIV (Q5UNW3) Hypothetical protein R705| Length = 313 Score = 29.3 bits (64), Expect = 8.7 Identities = 28/100 (28%), Positives = 40/100 (40%) Frame = +2 Query: 74 RGGAARGVARKSHGHRLRQGQQSPGKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMI 253 R AR + +S G R G +S G S G + G S +G+K Sbjct: 203 RSSNARSTSSRSSGSR-SSGSRSSGSRSS----GSRSTGSKTS--------SRSSGSKTS 249 Query: 254 HKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNS 373 +SRSR S G +G+SRN G +S + + S Sbjct: 250 RSSGSSRSRSGSSGSKSGRSRNSRSGTSGRSSNSRSGSRS 289 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,645,396 Number of Sequences: 219361 Number of extensions: 2009528 Number of successful extensions: 4848 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 4719 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4846 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
