| Clone Name | basd24l12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY754697.1| Zea mays immunophilin mRNA, complete cds Length = 761 Score = 260 bits (131), Expect = 4e-66 Identities = 253/291 (86%), Gaps = 2/291 (0%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||||||||| ||||||||||||||||||| | ||||||||| ||||||||| Sbjct: 123 agaagcagatcctgagatccggcaccggccccaagccgataaagggccag-aaggtcacc 181 Query: 79 gtccactgcaccggctacggcaaggacggtgatctgtccaagaagttttggagtaccaag 138 || ||||||||||||||||| ||||| |||||||||||||||| |||||||| |||||| Sbjct: 182 gttcactgcaccggctacgggaaggatcgtgatctgtccaagaaattttggagcaccaag 241 Query: 139 gtatcctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaaggatg 198 | | |||||||||||||||||| ||||| |||||| | ||||||||||||||||||||| Sbjct: 242 g-accctgggcagcagccattcagtttcagcattggtcagggttcagtgatcaaaggatg 300 Query: 199 ggatgagggagttatggacatgcaattgggtgaagtcgcccgtcttaagtgcaccccaga 258 ||| |||||||||||| ||||||| |||||||||| || ||| | ||||||| || || Sbjct: 301 ggacgagggagttatgaccatgcaagtgggtgaagttgctcgtatccagtgcacgcctga 360 Query: 259 ctacgcttatggatctggtggctctccagcctggggaattcaaccaaactc 309 || ||||||||| | || || | |||||||||||||||||||||||||| Sbjct: 361 ttatgcttatggagccggcgggttcccagcctggggaattcaaccaaactc 411
>gb|AY103897.1| Zea mays PCO108516 mRNA sequence Length = 797 Score = 260 bits (131), Expect = 4e-66 Identities = 253/291 (86%), Gaps = 2/291 (0%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||||||||| ||||||||||||||||||| | ||||||||| ||||||||| Sbjct: 123 agaagcagatcctgagatccggcaccggccccaagccgataaagggccag-aaggtcacc 181 Query: 79 gtccactgcaccggctacggcaaggacggtgatctgtccaagaagttttggagtaccaag 138 || ||||||||||||||||| ||||| |||||||||||||||| |||||||| |||||| Sbjct: 182 gttcactgcaccggctacgggaaggatcgtgatctgtccaagaaattttggagcaccaag 241 Query: 139 gtatcctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaaggatg 198 | | |||||||||||||||||| ||||| |||||| | ||||||||||||||||||||| Sbjct: 242 g-accctgggcagcagccattcagtttcagcattggtcagggttcagtgatcaaaggatg 300 Query: 199 ggatgagggagttatggacatgcaattgggtgaagtcgcccgtcttaagtgcaccccaga 258 ||| |||||||||||| ||||||| |||||||||| || ||| | ||||||| || || Sbjct: 301 ggacgagggagttatgaccatgcaagtgggtgaagttgctcgtatccagtgcacgcctga 360 Query: 259 ctacgcttatggatctggtggctctccagcctggggaattcaaccaaactc 309 || ||||||||| | || || | |||||||||||||||||||||||||| Sbjct: 361 ttatgcttatggagccggcgggttcccagcctggggaattcaaccaaactc 411
>ref|XM_467909.1| Oryza sativa (japonica cultivar-group), mRNA Length = 620 Score = 218 bits (110), Expect = 1e-53 Identities = 268/318 (84%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 26 gatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcaccgtccact 85 |||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct: 119 gatcctgaaagccggcaccggtcccaagcccgtcaagggccag-aaggtcaccgtccact 177 Query: 86 gcaccggctacggcaaggacggtgatctgtccaagaagttttggagtaccaaggtatcct 145 ||||||||| ||| || || |||||| | |||||||||||||| || |||| | | Sbjct: 178 gcaccggcttcgggaaagataatgatctcgctaagaagttttggagcacaaagg-acgca 236 Query: 146 gggcagcagccattcgctttcaacattggcctgggttcagtgatcaaaggatgggatgag 205 || ||| |||||||| |||||| || |||| |||||| ||||||||||||||||| ||| Sbjct: 237 ggccaggagccattcagtttcaatataggccagggttcggtgatcaaaggatgggacgag 296 Query: 206 ggagttatggacatgcaattgggtgaagtcgcccgtcttaagtgcaccccagactacgct 265 ||||||||| ||||||| |||||||||| || ||| || |||||||||| || || || Sbjct: 297 ggagttatgaccatgcaagtgggtgaagttgctcgtattcagtgcaccccggattatgcg 356 Query: 266 tatggatctggtggctctccagcctggggaattcaaccaaactccgagctgatattcgag 325 |||||| || |||| | ||| ||||||||||||| ||||||||| | |||| | |||||| Sbjct: 357 tatggagctagtgggtttccggcctggggaattcgaccaaactcagtgctggtgttcgag 416 Query: 326 atcgaagttcttagcgcc 343 || || |||||||||||| Sbjct: 417 attgaggttcttagcgcc 434
>ref|XM_506987.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1175_B01.15 mRNA Length = 630 Score = 218 bits (110), Expect = 1e-53 Identities = 268/318 (84%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 26 gatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcaccgtccact 85 |||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct: 118 gatcctgaaagccggcaccggtcccaagcccgtcaagggccag-aaggtcaccgtccact 176 Query: 86 gcaccggctacggcaaggacggtgatctgtccaagaagttttggagtaccaaggtatcct 145 ||||||||| ||| || || |||||| | |||||||||||||| || |||| | | Sbjct: 177 gcaccggcttcgggaaagataatgatctcgctaagaagttttggagcacaaagg-acgca 235 Query: 146 gggcagcagccattcgctttcaacattggcctgggttcagtgatcaaaggatgggatgag 205 || ||| |||||||| |||||| || |||| |||||| ||||||||||||||||| ||| Sbjct: 236 ggccaggagccattcagtttcaatataggccagggttcggtgatcaaaggatgggacgag 295 Query: 206 ggagttatggacatgcaattgggtgaagtcgcccgtcttaagtgcaccccagactacgct 265 ||||||||| ||||||| |||||||||| || ||| || |||||||||| || || || Sbjct: 296 ggagttatgaccatgcaagtgggtgaagttgctcgtattcagtgcaccccggattatgcg 355 Query: 266 tatggatctggtggctctccagcctggggaattcaaccaaactccgagctgatattcgag 325 |||||| || |||| | ||| ||||||||||||| ||||||||| | |||| | |||||| Sbjct: 356 tatggagctagtgggtttccggcctggggaattcgaccaaactcagtgctggtgttcgag 415 Query: 326 atcgaagttcttagcgcc 343 || || |||||||||||| Sbjct: 416 attgaggttcttagcgcc 433
>dbj|AK121481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149K16, full insert sequence Length = 620 Score = 218 bits (110), Expect = 1e-53 Identities = 268/318 (84%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 26 gatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcaccgtccact 85 |||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct: 119 gatcctgaaagccggcaccggtcccaagcccgtcaagggccag-aaggtcaccgtccact 177 Query: 86 gcaccggctacggcaaggacggtgatctgtccaagaagttttggagtaccaaggtatcct 145 ||||||||| ||| || || |||||| | |||||||||||||| || |||| | | Sbjct: 178 gcaccggcttcgggaaagataatgatctcgctaagaagttttggagcacaaagg-acgca 236 Query: 146 gggcagcagccattcgctttcaacattggcctgggttcagtgatcaaaggatgggatgag 205 || ||| |||||||| |||||| || |||| |||||| ||||||||||||||||| ||| Sbjct: 237 ggccaggagccattcagtttcaatataggccagggttcggtgatcaaaggatgggacgag 296 Query: 206 ggagttatggacatgcaattgggtgaagtcgcccgtcttaagtgcaccccagactacgct 265 ||||||||| ||||||| |||||||||| || ||| || |||||||||| || || || Sbjct: 297 ggagttatgaccatgcaagtgggtgaagttgctcgtattcagtgcaccccggattatgcg 356 Query: 266 tatggatctggtggctctccagcctggggaattcaaccaaactccgagctgatattcgag 325 |||||| || |||| | ||| ||||||||||||| ||||||||| | |||| | |||||| Sbjct: 357 tatggagctagtgggtttccggcctggggaattcgaccaaactcagtgctggtgttcgag 416 Query: 326 atcgaagttcttagcgcc 343 || || |||||||||||| Sbjct: 417 attgaggttcttagcgcc 434
>dbj|AK063850.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-C11, full insert sequence Length = 630 Score = 218 bits (110), Expect = 1e-53 Identities = 268/318 (84%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 26 gatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcaccgtccact 85 |||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct: 118 gatcctgaaagccggcaccggtcccaagcccgtcaagggccag-aaggtcaccgtccact 176 Query: 86 gcaccggctacggcaaggacggtgatctgtccaagaagttttggagtaccaaggtatcct 145 ||||||||| ||| || || |||||| | |||||||||||||| || |||| | | Sbjct: 177 gcaccggcttcgggaaagataatgatctcgctaagaagttttggagcacaaagg-acgca 235 Query: 146 gggcagcagccattcgctttcaacattggcctgggttcagtgatcaaaggatgggatgag 205 || ||| |||||||| |||||| || |||| |||||| ||||||||||||||||| ||| Sbjct: 236 ggccaggagccattcagtttcaatataggccagggttcggtgatcaaaggatgggacgag 295 Query: 206 ggagttatggacatgcaattgggtgaagtcgcccgtcttaagtgcaccccagactacgct 265 ||||||||| ||||||| |||||||||| || ||| || |||||||||| || || || Sbjct: 296 ggagttatgaccatgcaagtgggtgaagttgctcgtattcagtgcaccccggattatgcg 355 Query: 266 tatggatctggtggctctccagcctggggaattcaaccaaactccgagctgatattcgag 325 |||||| || |||| | ||| ||||||||||||| ||||||||| | |||| | |||||| Sbjct: 356 tatggagctagtgggtttccggcctggggaattcgaccaaactcagtgctggtgttcgag 415 Query: 326 atcgaagttcttagcgcc 343 || || |||||||||||| Sbjct: 416 attgaggttcttagcgcc 433
>gb|BT016383.1| Zea mays clone Contig216 mRNA sequence Length = 995 Score = 214 bits (108), Expect = 2e-52 Identities = 191/216 (88%), Gaps = 2/216 (0%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||||||||| ||||||||||||||||||| | ||||| | | ||||||||| Sbjct: 125 agaagcagatcctgagatccggcaccggccccaagccgataaaggggcgg-aaggtcacc 183 Query: 79 gtccactgcaccggctacggcaaggacggtgatctgtccaagaagttttggagtaccaag 138 || ||||||||||||||||| ||||| |||||||||||||||| |||||||| |||||| Sbjct: 184 gttcactgcaccggctacgggaaggatcgtgatctgtccaagaaattttggagcaccaag 243 Query: 139 gtatcctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaaggatg 198 | | |||||||||||||||||| ||||| |||||| | ||||||||||||||||||||| Sbjct: 244 g-accctgggcagcagccattcagtttcagcattggtcagggttcagtgatcaaaggatg 302 Query: 199 ggatgagggagttatggacatgcaattgggtgaagt 234 ||| |||||||||||| ||||||| |||||||||| Sbjct: 303 ggacgagggagttatgaccatgcaagtgggtgaagt 338 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 284 ccagcctggggaattcaaccaaactc 309 |||||||||||||||||||||||||| Sbjct: 652 ccagcctggggaattcaaccaaactc 677
>dbj|AK100511.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099N19, full insert sequence Length = 1896 Score = 107 bits (54), Expect = 4e-20 Identities = 94/106 (88%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 26 gatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcaccgtccact 85 |||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct: 116 gatcctgaaagccggcaccggtcccaagcccgtcaagggccag-aaggtcaccgtccact 174 Query: 86 gcaccggctacggcaaggacggtgatctgtccaagaagttttggag 131 ||||||||| ||| || || |||||| | |||||||||||||| Sbjct: 175 gcaccggcttcgggaaagataatgatctcgctaagaagttttggag 220
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 105 bits (53), Expect = 1e-19 Identities = 66/69 (95%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 26 gatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcaccgtccact 85 |||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct: 32038214 gatcctgaaagccggcaccggtcccaagcccgtcaagggccag-aaggtcaccgtccact 32038156 Query: 86 gcaccggct 94 ||||||||| Sbjct: 32038155 gcaccggct 32038147 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 246 agtgcaccccagactacgcttatggatctggtggctctccagcctggggaattcaaccaa 305 |||||||||| || || || |||||| || |||| | ||| ||||||||||||| ||||| Sbjct: 32036548 agtgcaccccggattatgcgtatggagctagtgggtttccggcctggggaattcgaccaa 32036489 Query: 306 actccgagctgatattcgagatcgaagttcttagcgcc 343 |||| | |||| | |||||||| || |||||||||||| Sbjct: 32036488 actcagtgctggtgttcgagattgaggttcttagcgcc 32036451 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 193 aggatgggatgagggagttatggacatgcaattgggtgaagt 234 ||||||||| |||||||||||| ||||||| |||||||||| Sbjct: 32036921 aggatgggacgagggagttatgaccatgcaagtgggtgaagt 32036880
>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1175_B01 Length = 96191 Score = 105 bits (53), Expect = 1e-19 Identities = 66/69 (95%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 26 gatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcaccgtccact 85 |||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct: 58589 gatcctgaaagccggcaccggtcccaagcccgtcaagggccag-aaggtcaccgtccact 58531 Query: 86 gcaccggct 94 ||||||||| Sbjct: 58530 gcaccggct 58522 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 246 agtgcaccccagactacgcttatggatctggtggctctccagcctggggaattcaaccaa 305 |||||||||| || || || |||||| || |||| | ||| ||||||||||||| ||||| Sbjct: 56923 agtgcaccccggattatgcgtatggagctagtgggtttccggcctggggaattcgaccaa 56864 Query: 306 actccgagctgatattcgagatcgaagttcttagcgcc 343 |||| | |||| | |||||||| || |||||||||||| Sbjct: 56863 actcagtgctggtgttcgagattgaggttcttagcgcc 56826 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 193 aggatgggatgagggagttatggacatgcaattgggtgaagt 234 ||||||||| |||||||||||| ||||||| |||||||||| Sbjct: 57296 aggatgggacgagggagttatgaccatgcaagtgggtgaagt 57255
>gb|DQ428233.1| Sorghum propinquum locus PRC0268 genomic sequence Length = 798 Score = 103 bits (52), Expect = 6e-19 Identities = 74/80 (92%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||| |||||||||| |||||||||||||| || ||||||||| ||||||||| Sbjct: 32 agaagcagatcttgagagccgggaccggccccaagccggtaaagggccag-aaggtcacc 90 Query: 79 gtccactgcaccggctacgg 98 |||||||||||||||||||| Sbjct: 91 gtccactgcaccggctacgg 110 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 143 cctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaagg 195 |||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 600 cctgggcagcagccattcagtttcaacattggtctgggttcagtgatcaaagg 652
>gb|DQ428232.1| Sorghum bicolor voucher PI585454 locus PRC0268 genomic sequence Length = 801 Score = 103 bits (52), Expect = 6e-19 Identities = 74/80 (92%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||| |||||||||| |||||||||||||| || ||||||||| ||||||||| Sbjct: 35 agaagcagatcttgagagccgggaccggccccaagccggtaaagggccag-aaggtcacc 93 Query: 79 gtccactgcaccggctacgg 98 |||||||||||||||||||| Sbjct: 94 gtccactgcaccggctacgg 113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 143 cctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaagg 195 |||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 603 cctgggcagcagccattcagtttcaacattggtctgggttcagtgatcaaagg 655
>gb|DQ428231.1| Sorghum bicolor voucher PI267539 locus PRC0268 genomic sequence Length = 801 Score = 103 bits (52), Expect = 6e-19 Identities = 74/80 (92%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||| |||||||||| |||||||||||||| || ||||||||| ||||||||| Sbjct: 35 agaagcagatcttgagagccgggaccggccccaagccggtaaagggccag-aaggtcacc 93 Query: 79 gtccactgcaccggctacgg 98 |||||||||||||||||||| Sbjct: 94 gtccactgcaccggctacgg 113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 143 cctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaagg 195 |||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 603 cctgggcagcagccattcagtttcaacattggtctgggttcagtgatcaaagg 655
>gb|DQ428230.1| Sorghum bicolor voucher PI267408 locus PRC0268 genomic sequence Length = 801 Score = 103 bits (52), Expect = 6e-19 Identities = 74/80 (92%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||| |||||||||| |||||||||||||| || ||||||||| ||||||||| Sbjct: 35 agaagcagatcttgagagccgggaccggccccaagccggtaaagggccag-aaggtcacc 93 Query: 79 gtccactgcaccggctacgg 98 |||||||||||||||||||| Sbjct: 94 gtccactgcaccggctacgg 113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 143 cctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaagg 195 |||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 603 cctgggcagcagccattcagtttcaacattggtctgggttcagtgatcaaagg 655
>gb|DQ428229.1| Sorghum bicolor voucher PI221607 locus PRC0268 genomic sequence Length = 801 Score = 103 bits (52), Expect = 6e-19 Identities = 74/80 (92%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||| |||||||||| |||||||||||||| || ||||||||| ||||||||| Sbjct: 35 agaagcagatcttgagagccgggaccggccccaagccggtaaagggccag-aaggtcacc 93 Query: 79 gtccactgcaccggctacgg 98 |||||||||||||||||||| Sbjct: 94 gtccactgcaccggctacgg 113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 143 cctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaagg 195 |||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 603 cctgggcagcagccattcagtttcaacattggtctgggttcagtgatcaaagg 655
>gb|DQ428228.1| Sorghum bicolor voucher PI152702 locus PRC0268 genomic sequence Length = 801 Score = 103 bits (52), Expect = 6e-19 Identities = 74/80 (92%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||| |||||||||| |||||||||||||| || ||||||||| ||||||||| Sbjct: 35 agaagcagatcttgagagccgggaccggccccaagccggtaaagggccag-aaggtcacc 93 Query: 79 gtccactgcaccggctacgg 98 |||||||||||||||||||| Sbjct: 94 gtccactgcaccggctacgg 113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 143 cctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaagg 195 |||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 603 cctgggcagcagccattcagtttcaacattggtctgggttcagtgatcaaagg 655
>gb|DQ428227.1| Sorghum bicolor voucher NSL92371 locus PRC0268 genomic sequence Length = 801 Score = 103 bits (52), Expect = 6e-19 Identities = 74/80 (92%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||| |||||||||| |||||||||||||| || ||||||||| ||||||||| Sbjct: 35 agaagcagatcttgagagccgggaccggccccaagccggtaaagggccag-aaggtcacc 93 Query: 79 gtccactgcaccggctacgg 98 |||||||||||||||||||| Sbjct: 94 gtccactgcaccggctacgg 113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 143 cctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaagg 195 |||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 603 cctgggcagcagccattcagtttcaacattggtctgggttcagtgatcaaagg 655
>gb|DQ428226.1| Sorghum bicolor voucher NSL87902 locus PRC0268 genomic sequence Length = 801 Score = 103 bits (52), Expect = 6e-19 Identities = 74/80 (92%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||| |||||||||| |||||||||||||| || ||||||||| ||||||||| Sbjct: 35 agaagcagatcttgagagccgggaccggccccaagccggtaaagggccag-aaggtcacc 93 Query: 79 gtccactgcaccggctacgg 98 |||||||||||||||||||| Sbjct: 94 gtccactgcaccggctacgg 113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 143 cctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaagg 195 |||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 603 cctgggcagcagccattcagtttcaacattggtctgggttcagtgatcaaagg 655
>gb|DQ428225.1| Sorghum bicolor voucher NSL87666 locus PRC0268 genomic sequence Length = 801 Score = 103 bits (52), Expect = 6e-19 Identities = 74/80 (92%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||| |||||||||| |||||||||||||| || ||||||||| ||||||||| Sbjct: 35 agaagcagatcttgagagccgggaccggccccaagccggtaaagggccag-aaggtcacc 93 Query: 79 gtccactgcaccggctacgg 98 |||||||||||||||||||| Sbjct: 94 gtccactgcaccggctacgg 113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 143 cctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaagg 195 |||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 603 cctgggcagcagccattcagtttcaacattggtctgggttcagtgatcaaagg 655
>gb|DQ428224.1| Sorghum bicolor voucher NSL77217 locus PRC0268 genomic sequence Length = 801 Score = 103 bits (52), Expect = 6e-19 Identities = 74/80 (92%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||| |||||||||| |||||||||||||| || ||||||||| ||||||||| Sbjct: 35 agaagcagatcttgagagccgggaccggccccaagccggtaaagggccag-aaggtcacc 93 Query: 79 gtccactgcaccggctacgg 98 |||||||||||||||||||| Sbjct: 94 gtccactgcaccggctacgg 113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 143 cctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaagg 195 |||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 603 cctgggcagcagccattcagtttcaacattggtctgggttcagtgatcaaagg 655
>gb|DQ428223.1| Sorghum bicolor voucher NSL77034 locus PRC0268 genomic sequence Length = 801 Score = 103 bits (52), Expect = 6e-19 Identities = 74/80 (92%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||| |||||||||| |||||||||||||| || ||||||||| ||||||||| Sbjct: 35 agaagcagatcttgagagccgggaccggccccaagccggtaaagggccag-aaggtcacc 93 Query: 79 gtccactgcaccggctacgg 98 |||||||||||||||||||| Sbjct: 94 gtccactgcaccggctacgg 113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 143 cctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaagg 195 |||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 603 cctgggcagcagccattcagtttcaacattggtctgggttcagtgatcaaagg 655
>gb|DQ428222.1| Sorghum bicolor voucher NSL56174 locus PRC0268 genomic sequence Length = 801 Score = 103 bits (52), Expect = 6e-19 Identities = 74/80 (92%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||| |||||||||| |||||||||||||| || ||||||||| ||||||||| Sbjct: 35 agaagcagatcttgagagccgggaccggccccaagccggtaaagggccag-aaggtcacc 93 Query: 79 gtccactgcaccggctacgg 98 |||||||||||||||||||| Sbjct: 94 gtccactgcaccggctacgg 113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 143 cctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaagg 195 |||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 603 cctgggcagcagccattcagtttcaacattggtctgggttcagtgatcaaagg 655
>gb|DQ428221.1| Sorghum bicolor voucher NSL56003 locus PRC0268 genomic sequence Length = 801 Score = 103 bits (52), Expect = 6e-19 Identities = 74/80 (92%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||| |||||||||| |||||||||||||| || ||||||||| ||||||||| Sbjct: 35 agaagcagatcttgagagccgggaccggccccaagccggtaaagggccag-aaggtcacc 93 Query: 79 gtccactgcaccggctacgg 98 |||||||||||||||||||| Sbjct: 94 gtccactgcaccggctacgg 113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 143 cctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaagg 195 |||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 603 cctgggcagcagccattcagtttcaacattggtctgggttcagtgatcaaagg 655
>gb|DQ428220.1| Sorghum bicolor voucher NSL55243 locus PRC0268 genomic sequence Length = 801 Score = 103 bits (52), Expect = 6e-19 Identities = 74/80 (92%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||| |||||||||| |||||||||||||| || ||||||||| ||||||||| Sbjct: 35 agaagcagatcttgagagccgggaccggccccaagccggtaaagggccag-aaggtcacc 93 Query: 79 gtccactgcaccggctacgg 98 |||||||||||||||||||| Sbjct: 94 gtccactgcaccggctacgg 113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 143 cctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaagg 195 |||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 603 cctgggcagcagccattcagtttcaacattggtctgggttcagtgatcaaagg 655
>gb|DQ428219.1| Sorghum bicolor voucher NSL51365 locus PRC0268 genomic sequence Length = 801 Score = 103 bits (52), Expect = 6e-19 Identities = 74/80 (92%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||| |||||||||| |||||||||||||| || ||||||||| ||||||||| Sbjct: 35 agaagcagatcttgagagccgggaccggccccaagccggtaaagggccag-aaggtcacc 93 Query: 79 gtccactgcaccggctacgg 98 |||||||||||||||||||| Sbjct: 94 gtccactgcaccggctacgg 113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 143 cctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaagg 195 |||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 603 cctgggcagcagccattcagtttcaacattggtctgggttcagtgatcaaagg 655
>gb|DQ428218.1| Sorghum bicolor voucher NSL51030 locus PRC0268 genomic sequence Length = 801 Score = 103 bits (52), Expect = 6e-19 Identities = 74/80 (92%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||| |||||||||| |||||||||||||| || ||||||||| ||||||||| Sbjct: 35 agaagcagatcttgagagccgggaccggccccaagccggtaaagggccag-aaggtcacc 93 Query: 79 gtccactgcaccggctacgg 98 |||||||||||||||||||| Sbjct: 94 gtccactgcaccggctacgg 113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 143 cctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaagg 195 |||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 603 cctgggcagcagccattcagtttcaacattggtctgggttcagtgatcaaagg 655
>gb|DQ428217.1| Sorghum bicolor voucher NSL50875 locus PRC0268 genomic sequence Length = 801 Score = 103 bits (52), Expect = 6e-19 Identities = 74/80 (92%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 19 agaaggagatcctgagagccggcaccggccccaagcccgtcaagggccagcaaggtcacc 78 ||||| ||||| |||||||||| |||||||||||||| || ||||||||| ||||||||| Sbjct: 35 agaagcagatcttgagagccgggaccggccccaagccggtaaagggccag-aaggtcacc 93 Query: 79 gtccactgcaccggctacgg 98 |||||||||||||||||||| Sbjct: 94 gtccactgcaccggctacgg 113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 143 cctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaaagg 195 |||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 603 cctgggcagcagccattcagtttcaacattggtctgggttcagtgatcaaagg 655
>gb|U96925.1|VFU96925 Vicia faba immunophilin (FKBP12) mRNA, complete cds Length = 574 Score = 71.9 bits (36), Expect = 2e-09 Identities = 109/132 (82%), Gaps = 1/132 (0%) Strand = Plus / Plus Query: 73 gtcaccgtccactgcaccggctacggcaaggacggtgatctgtccaagaagttttggagt 132 |||||||| ||||||||||| ||||| || ||||||| || || ||||||| ||||| Sbjct: 91 gtcaccgttcactgcaccggttacggtaaaaacggtgacctttctcagaagttctggagc 150 Query: 133 accaaggtatcctgggcagcagccattcgctttcaacattggcctgggttcagtgatcaa 192 || |||| ||||||| ||| | |||||| ||||||| || |||| ||||| || ||||| Sbjct: 151 acgaagg-atcctggccagaatccattcactttcaaaatcggccaaggttctgtcatcaa 209 Query: 193 aggatgggatga 204 |||||||||||| Sbjct: 210 aggatgggatga 221
>gb|AY490245.1| Lycopersicon esculentum CONSTANS interacting protein 3 (CIP3) mRNA, complete cds Length = 617 Score = 69.9 bits (35), Expect = 8e-09 Identities = 153/191 (80%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 119 agaagttttggagtaccaaggtatcctgggcagcagccattcgctttcaacattggcctg 178 ||||||| ||||| || |||| |||| || |||||||| ||| ||||||| || |||| Sbjct: 125 agaagttctggagcactaagg-atccaggccagcagcctttctctttcaagatcggccaa 183 Query: 179 ggttcagtgatcaaaggatgggatgagggagttatggacatgcaattgggtgaagtcgcc 238 || ||| ||||||||||||||||| ||||| ||| |||||||||||| ||||| || Sbjct: 184 ggcaaagttatcaaaggatgggatgaaggagtactgggcatgcaattgggagaagttgct 243 Query: 239 cgtcttaagtgcaccccagactacgcttatggatctggtggctctccagcctggggaatt 298 || | | ||||||||| || || |||||||| ||||||| | |||||| ||||| ||| Sbjct: 244 cgattaacgtgcacccctgattatgcttatggtgctggtggatttccagcatggggtatt 303 Query: 299 caaccaaactc 309 || || ||||| Sbjct: 304 cagcccaactc 314
>ref|NM_125831.2| Arabidopsis thaliana FKBP12; FK506 binding / peptidyl-prolyl cis-trans isomerase AT5G64350 (FKBP12) mRNA, complete cds Length = 632 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 73 gtcaccgtccactgcaccggctacggcaaggacggtgatctgtccaagaagttttggagt 132 ||||||||||| |||||||| | ||| || || |||||||| ||| ||||||| |||||| Sbjct: 145 gtcaccgtccattgcaccggattcgggaaagatggtgatctatcccagaagttctggagt 204 Query: 133 accaagg 139 || |||| Sbjct: 205 acaaagg 211 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 185 gtgatcaaaggatgggatgagggagttat 213 |||||||||||||||||||| || ||||| Sbjct: 256 gtgatcaaaggatgggatgaaggcgttat 284
>gb|AY081564.1| Arabidopsis thaliana immunophilin (At5g64350) mRNA, complete cds Length = 510 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 73 gtcaccgtccactgcaccggctacggcaaggacggtgatctgtccaagaagttttggagt 132 ||||||||||| |||||||| | ||| || || |||||||| ||| ||||||| |||||| Sbjct: 64 gtcaccgtccattgcaccggattcgggaaagatggtgatctatcccagaagttctggagt 123 Query: 133 accaagg 139 || |||| Sbjct: 124 acaaagg 130 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 185 gtgatcaaaggatgggatgagggagttat 213 |||||||||||||||||||| || ||||| Sbjct: 175 gtgatcaaaggatgggatgaaggcgttat 203
>gb|AY059928.1| Arabidopsis thaliana immunophilin (At5g64350; MSJ1.19) mRNA, complete cds Length = 590 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 73 gtcaccgtccactgcaccggctacggcaaggacggtgatctgtccaagaagttttggagt 132 ||||||||||| |||||||| | ||| || || |||||||| ||| ||||||| |||||| Sbjct: 122 gtcaccgtccattgcaccggattcgggaaagatggtgatctatcccagaagttctggagt 181 Query: 133 accaagg 139 || |||| Sbjct: 182 acaaagg 188 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 185 gtgatcaaaggatgggatgagggagttat 213 |||||||||||||||||||| || ||||| Sbjct: 233 gtgatcaaaggatgggatgaaggcgttat 261
>gb|U96924.1|ATU96924 Arabidopsis thaliana immunophilin (FKBP12) mRNA, complete cds Length = 617 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 73 gtcaccgtccactgcaccggctacggcaaggacggtgatctgtccaagaagttttggagt 132 ||||||||||| |||||||| | ||| || || |||||||| ||| ||||||| |||||| Sbjct: 99 gtcaccgtccattgcaccggattcgggaaagatggtgatctatcccagaagttctggagt 158 Query: 133 accaagg 139 || |||| Sbjct: 159 acaaagg 165 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 185 gtgatcaaaggatgggatgagggagttat 213 |||||||||||||||||||| || ||||| Sbjct: 210 gtgatcaaaggatgggatgaaggcgttat 238
>gb|AY084289.1| Arabidopsis thaliana clone 10243 mRNA, complete sequence Length = 582 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 73 gtcaccgtccactgcaccggctacggcaaggacggtgatctgtccaagaagttttggagt 132 ||||||||||| |||||||| | ||| || || |||||||| ||| ||||||| |||||| Sbjct: 145 gtcaccgtccattgcaccggattcgggaaagatggtgatctatcccagaagttctggagt 204 Query: 133 accaagg 139 || |||| Sbjct: 205 acaaagg 211 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 185 gtgatcaaaggatgggatgagggagttat 213 |||||||||||||||||||| || ||||| Sbjct: 256 gtgatcaaaggatgggatgaaggcgttat 284
>dbj|AP007284.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT23F02, TM0183, complete sequence Length = 70173 Score = 48.1 bits (24), Expect = 0.028 Identities = 54/64 (84%) Strand = Plus / Plus Query: 246 agtgcaccccagactacgcttatggatctggtggctctccagcctggggaattcaaccaa 305 ||||| |||| || || |||||||| ||||||||| ||| || |||||||| ||||||| Sbjct: 48382 agtgctcccctgattatgcttatggtgctggtggctttcctgcttggggaatacaaccaa 48441 Query: 306 actc 309 |||| Sbjct: 48442 actc 48445
>emb|AJ495769.1|HVU495769 Hordeum vulgare mRNA for putative immunophilin Length = 835 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 agtgatcaaaggatgggatgaggga 208 ||||||||||||||||||| ||||| Sbjct: 343 agtgatcaaaggatgggatcaggga 367
>gb|DQ271487.1| Mustela vison clone IX2M19 microsatellite sequence Length = 852 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 203 gagggagttatggacatgcaa 223 ||||||||||||||||||||| Sbjct: 319 gagggagttatggacatgcaa 299
>gb|AF165999.1|AF165999 Drosophila melanogaster sodium-dependent excitatory amino acid transporter 1 mRNA, complete cds Length = 2704 Score = 42.1 bits (21), Expect = 1.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 250 caccccagactacgcttatggatctggtg 278 |||||||||| |||||||||||||||||| Sbjct: 537 caccccagac-acgcttatggatctggtg 564
>gb|M92297.2|STMBMANASE Streptomyces lividans mannanase (manA) gene, complete cds Length = 1881 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 caccggctacggcaaggacgg 107 ||||||||||||||||||||| Sbjct: 597 caccggctacggcaaggacgg 617
>dbj|AB027469.1| Drosophila melanogaster gene for glutamate transporter DGLT-1, complete cds Length = 8035 Score = 42.1 bits (21), Expect = 1.8 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 250 caccccagactacgcttatggatctggtg 278 |||||||||| |||||||||||||||||| Sbjct: 5137 caccccagac-acgcttatggatctggtg 5164
>ref|XM_636926.1| Dictyostelium discoideum hypothetical protein (DDB0204309), partial mRNA Length = 483 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 atcaaaggatgggatgaggg 207 |||||||||||||||||||| Sbjct: 322 atcaaaggatgggatgaggg 341
>gb|AC126538.1| Homo sapiens chromosome 16 clone CTD-3225F13, complete sequence Length = 188015 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tccagaaggagatcctgaga 35 |||||||||||||||||||| Sbjct: 106397 tccagaaggagatcctgaga 106378
>gb|AC133065.3| Homo sapiens chromosome 16 clone RP11-876N24, complete sequence Length = 142215 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tccagaaggagatcctgaga 35 |||||||||||||||||||| Sbjct: 126079 tccagaaggagatcctgaga 126098
>emb|AL670597.18| Mouse DNA sequence from clone RP23-235P16 on chromosome X, complete sequence Length = 186284 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 176 ctgggttcagtgatcaaaggatgggatg 203 ||||||||||||||| ||||| |||||| Sbjct: 100620 ctgggttcagtgatccaaggaggggatg 100593
>emb|AL954741.9| Zebrafish DNA sequence from clone CH211-255F4 in linkage group 22, complete sequence Length = 166560 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 agggagttatggacatgcaa 223 |||||||||||||||||||| Sbjct: 5592 agggagttatggacatgcaa 5573
>gb|AY105607.1| Zea mays PCO107138 mRNA sequence Length = 808 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 agtgatcaaaggatgggatgaggg 207 ||||||||||||||||||| |||| Sbjct: 347 agtgatcaaaggatgggatcaggg 370
>gb|AC007014.1|AC007014 Homo sapiens chromosome 16 clone 66H6, complete sequence Length = 167080 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tccagaaggagatcctgaga 35 |||||||||||||||||||| Sbjct: 163579 tccagaaggagatcctgaga 163560
>dbj|AP000781.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-872D17, complete sequence Length = 190251 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccagaaggagatcctgagag 36 |||||||||||||||||||| Sbjct: 142070 ccagaaggagatcctgagag 142089 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,310,650 Number of Sequences: 3902068 Number of extensions: 4310650 Number of successful extensions: 72753 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 72604 Number of HSP's gapped (non-prelim): 109 length of query: 513 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 490 effective length of database: 17,143,297,704 effective search space: 8400215874960 effective search space used: 8400215874960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)