ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd24l09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PELO_DROME (P48612) Protein pelota 185 1e-46
2PELO_XENLA (Q5U567) Protein pelota homolog 180 3e-45
3PELO_PONPY (Q5RCE3) Protein pelota homolog 180 3e-45
4PELO_HUMAN (Q9BRX2) Protein pelota homolog 180 3e-45
5PELO_BOVIN (Q58DV0) Protein pelota homolog 178 1e-44
6PELO_RAT (Q5XIP1) Protein pelota homolog 177 2e-44
7PELO_MOUSE (Q80X73) Protein pelota homolog 177 2e-44
8PELO_BRARE (Q7ZWC4) Protein pelota homolog 177 2e-44
9PELO_CHICK (Q5ZK01) Protein pelota homolog 177 3e-44
10YNU6_CAEEL (P50444) Hypothetical protein R74.6 in chromosome III 150 3e-36
11Y174_METJA (Q57638) Hypothetical protein MJ0174 71 3e-12
12DOM34_YEAST (P33309) Protein DOM34 48 2e-05
13ASNH1_METJA (Q58516) Putative asparagine synthetase [glutamine-h... 31 3.4
14ILVC_RALSO (Q8XXN8) Ketol-acid reductoisomerase (EC 1.1.1.86) (A... 31 3.4
15GAG_MMTVC (P11284) Gag polyprotein [Contains: Protein p10; Phosp... 30 5.7
16HIS7_ASHGO (Q75B47) Imidazoleglycerol-phosphate dehydratase (EC ... 30 7.5
17RPOC_PEDAC (P77917) DNA-directed RNA polymerase beta' chain (EC ... 30 7.5
18ILVC_AZOSE (Q5NXP4) Ketol-acid reductoisomerase (EC 1.1.1.86) (A... 30 7.5
19M860_ARATH (P92523) Hypothetical mitochondrial protein AtMg00860... 29 9.8
20ILVC_RALEJ (Q473V5) Ketol-acid reductoisomerase (EC 1.1.1.86) (A... 29 9.8
21ILVC_BURS3 (Q39ED2) Ketol-acid reductoisomerase (EC 1.1.1.86) (A... 29 9.8

>PELO_DROME (P48612) Protein pelota|
          Length = 395

 Score =  185 bits (469), Expect = 1e-46
 Identities = 88/167 (52%), Positives = 124/167 (74%)
 Frame = +3

Query: 120 MKLVHRNLARNGPGSAKLLPEEEDDLWHAYNLIAVGDSLQAVTVRKVLRDSASGGRDAER 299
           MKL+ + + +   G+  L+PEE +D+WHAYNLIA GDS+++ T+RKV  ++A+G   + R
Sbjct: 1   MKLLGKYVDKGMQGNVTLVPEESEDMWHAYNLIAKGDSVRSTTIRKVQNETATGSSTSSR 60

Query: 300 VKLKLEIVVESVDYDKEGNVLRVRGKNITENDHVKIGQFHTLELELKRPFVLRKEYWDWL 479
           V+  L I VES+D+D +  VLR++G+NI EN +VK+G +HTL+LEL R F LRK  WD +
Sbjct: 61  VRTTLTIAVESIDFDTQACVLRLKGRNIEENQYVKMGAYHTLDLELNRKFELRKPEWDTI 120

Query: 480 ALDTIQQACDPTASADLAVILMQEGLAHLFLIGRSITATRSRIETSI 620
           AL+ I+ ACDPT SAD+A ++MQEGLAH+ LI  S+T  RS+IE SI
Sbjct: 121 ALERIEMACDPTQSADVAAVVMQEGLAHVCLITASMTLVRSKIEVSI 167



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>PELO_XENLA (Q5U567) Protein pelota homolog|
          Length = 383

 Score =  180 bits (456), Expect = 3e-45
 Identities = 84/167 (50%), Positives = 121/167 (72%)
 Frame = +3

Query: 120 MKLVHRNLARNGPGSAKLLPEEEDDLWHAYNLIAVGDSLQAVTVRKVLRDSASGGRDAER 299
           MKL+ +++ ++  G   L+PEE +D+WH YNL+ VGDSLQA T+RKV  +S++G   + R
Sbjct: 1   MKLIRKDIEKDNAGQVTLIPEEAEDMWHTYNLLHVGDSLQASTIRKVQTESSTGSVGSNR 60

Query: 300 VKLKLEIVVESVDYDKEGNVLRVRGKNITENDHVKIGQFHTLELELKRPFVLRKEYWDWL 479
           V+  L I VE++D+D +   LRV+G NI EN +VK+G +HT+ELE  R F L K+ WD +
Sbjct: 61  VRTTLTICVETIDFDSQACQLRVKGINIQENQYVKMGAYHTIELEPNRKFTLAKKQWDSI 120

Query: 480 ALDTIQQACDPTASADLAVILMQEGLAHLFLIGRSITATRSRIETSI 620
            L+ I+QACDP  SAD+A ++MQEGLAH+ L+  S+T  R++IETSI
Sbjct: 121 VLERIEQACDPAFSADVAAVVMQEGLAHICLVTPSMTLLRAKIETSI 167



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>PELO_PONPY (Q5RCE3) Protein pelota homolog|
          Length = 385

 Score =  180 bits (456), Expect = 3e-45
 Identities = 82/167 (49%), Positives = 122/167 (73%)
 Frame = +3

Query: 120 MKLVHRNLARNGPGSAKLLPEEEDDLWHAYNLIAVGDSLQAVTVRKVLRDSASGGRDAER 299
           MKLV +N+ ++  G   L+PEE +D+WH YNL+ VGDSL+A T+RKV  +S++G   + R
Sbjct: 1   MKLVRKNIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60

Query: 300 VKLKLEIVVESVDYDKEGNVLRVRGKNITENDHVKIGQFHTLELELKRPFVLRKEYWDWL 479
           V+  L + VE++D+D +   LRV+G NI EN++VK+G +HT+ELE  R F L K+ WD +
Sbjct: 61  VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120

Query: 480 ALDTIQQACDPTASADLAVILMQEGLAHLFLIGRSITATRSRIETSI 620
            L+ I+QACDP  SAD+A ++MQEGLAH+ L+  S+T TR+++E +I
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNI 167



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>PELO_HUMAN (Q9BRX2) Protein pelota homolog|
          Length = 385

 Score =  180 bits (456), Expect = 3e-45
 Identities = 82/167 (49%), Positives = 122/167 (73%)
 Frame = +3

Query: 120 MKLVHRNLARNGPGSAKLLPEEEDDLWHAYNLIAVGDSLQAVTVRKVLRDSASGGRDAER 299
           MKLV +N+ ++  G   L+PEE +D+WH YNL+ VGDSL+A T+RKV  +S++G   + R
Sbjct: 1   MKLVRKNIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60

Query: 300 VKLKLEIVVESVDYDKEGNVLRVRGKNITENDHVKIGQFHTLELELKRPFVLRKEYWDWL 479
           V+  L + VE++D+D +   LRV+G NI EN++VK+G +HT+ELE  R F L K+ WD +
Sbjct: 61  VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120

Query: 480 ALDTIQQACDPTASADLAVILMQEGLAHLFLIGRSITATRSRIETSI 620
            L+ I+QACDP  SAD+A ++MQEGLAH+ L+  S+T TR+++E +I
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNI 167



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>PELO_BOVIN (Q58DV0) Protein pelota homolog|
          Length = 386

 Score =  178 bits (451), Expect = 1e-44
 Identities = 81/167 (48%), Positives = 122/167 (73%)
 Frame = +3

Query: 120 MKLVHRNLARNGPGSAKLLPEEEDDLWHAYNLIAVGDSLQAVTVRKVLRDSASGGRDAER 299
           MKLV +++ ++  G   L+PEE +D+WH YNL+ VGDSL+A T+RKV  +S++G   + R
Sbjct: 1   MKLVRKDIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60

Query: 300 VKLKLEIVVESVDYDKEGNVLRVRGKNITENDHVKIGQFHTLELELKRPFVLRKEYWDWL 479
           V+  L + VE++D+D +   LRV+G NI EN++VK+G +HT+ELE  R F L K+ WD +
Sbjct: 61  VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120

Query: 480 ALDTIQQACDPTASADLAVILMQEGLAHLFLIGRSITATRSRIETSI 620
            L+ I+QACDP  SAD+A ++MQEGLAH+ L+  S+T TR+++E +I
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNI 167



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>PELO_RAT (Q5XIP1) Protein pelota homolog|
          Length = 385

 Score =  177 bits (450), Expect = 2e-44
 Identities = 81/167 (48%), Positives = 122/167 (73%)
 Frame = +3

Query: 120 MKLVHRNLARNGPGSAKLLPEEEDDLWHAYNLIAVGDSLQAVTVRKVLRDSASGGRDAER 299
           MKLV +++ ++  G   L+PEE +D+WH YNL+ VGDSL+A T+RKV  +S++G   + R
Sbjct: 1   MKLVRKDIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60

Query: 300 VKLKLEIVVESVDYDKEGNVLRVRGKNITENDHVKIGQFHTLELELKRPFVLRKEYWDWL 479
           V+  L + VE++D+D +   LRV+G NI EN++VK+G +HT+ELE  R F L K+ WD +
Sbjct: 61  VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120

Query: 480 ALDTIQQACDPTASADLAVILMQEGLAHLFLIGRSITATRSRIETSI 620
            L+ I+QACDP  SAD+A ++MQEGLAH+ L+  S+T TR+++E +I
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNI 167



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>PELO_MOUSE (Q80X73) Protein pelota homolog|
          Length = 385

 Score =  177 bits (450), Expect = 2e-44
 Identities = 81/167 (48%), Positives = 122/167 (73%)
 Frame = +3

Query: 120 MKLVHRNLARNGPGSAKLLPEEEDDLWHAYNLIAVGDSLQAVTVRKVLRDSASGGRDAER 299
           MKLV +++ ++  G   L+PEE +D+WH YNL+ VGDSL+A T+RKV  +S++G   + R
Sbjct: 1   MKLVRKDIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60

Query: 300 VKLKLEIVVESVDYDKEGNVLRVRGKNITENDHVKIGQFHTLELELKRPFVLRKEYWDWL 479
           V+  L + VE++D+D +   LRV+G NI EN++VK+G +HT+ELE  R F L K+ WD +
Sbjct: 61  VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120

Query: 480 ALDTIQQACDPTASADLAVILMQEGLAHLFLIGRSITATRSRIETSI 620
            L+ I+QACDP  SAD+A ++MQEGLAH+ L+  S+T TR+++E +I
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNI 167



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>PELO_BRARE (Q7ZWC4) Protein pelota homolog|
          Length = 385

 Score =  177 bits (450), Expect = 2e-44
 Identities = 80/167 (47%), Positives = 121/167 (72%)
 Frame = +3

Query: 120 MKLVHRNLARNGPGSAKLLPEEEDDLWHAYNLIAVGDSLQAVTVRKVLRDSASGGRDAER 299
           MKLVH+++ ++  G   L+P+E +D+WH YNL+ VGDSL+A T+RKV  +S++G   + R
Sbjct: 1   MKLVHKDIEKDNAGQVTLIPDEAEDMWHTYNLLQVGDSLRASTIRKVQTESSTGSVGSSR 60

Query: 300 VKLKLEIVVESVDYDKEGNVLRVRGKNITENDHVKIGQFHTLELELKRPFVLRKEYWDWL 479
           V+  L + VE++D+D +   LRV+G NI EN +VK+G +HT+ELEL R F L K+ WD +
Sbjct: 61  VRTTLTLCVETIDFDSQACQLRVKGTNIQENQYVKMGAYHTIELELNRKFTLAKKVWDSV 120

Query: 480 ALDTIQQACDPTASADLAVILMQEGLAHLFLIGRSITATRSRIETSI 620
            LD I+QACDP   AD+A ++MQEGLA+L L+  ++T  R+++E +I
Sbjct: 121 VLDRIEQACDPAQKADVAAVVMQEGLANLVLVTPAMTLLRAKVEVTI 167



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>PELO_CHICK (Q5ZK01) Protein pelota homolog|
          Length = 385

 Score =  177 bits (448), Expect = 3e-44
 Identities = 80/167 (47%), Positives = 122/167 (73%)
 Frame = +3

Query: 120 MKLVHRNLARNGPGSAKLLPEEEDDLWHAYNLIAVGDSLQAVTVRKVLRDSASGGRDAER 299
           MKLV ++L ++  G   L+PEE +D+WH YNL+ VGDSL+A T+RKV  +S++G   + R
Sbjct: 1   MKLVRKDLEKDNAGQVTLIPEEPEDMWHTYNLLQVGDSLRASTIRKVQTESSTGSVGSNR 60

Query: 300 VKLKLEIVVESVDYDKEGNVLRVRGKNITENDHVKIGQFHTLELELKRPFVLRKEYWDWL 479
           ++  L + VE++D+D +   LRV+G NI EN++VK+G +HT+ELE  R F L K+ WD +
Sbjct: 61  IRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120

Query: 480 ALDTIQQACDPTASADLAVILMQEGLAHLFLIGRSITATRSRIETSI 620
            L+ I+QACDP  +AD+A ++MQEGLAH+ L+  S+T TR+++E +I
Sbjct: 121 VLERIEQACDPAWNADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNI 167



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>YNU6_CAEEL (P50444) Hypothetical protein R74.6 in chromosome III|
          Length = 381

 Score =  150 bits (379), Expect = 3e-36
 Identities = 70/167 (41%), Positives = 113/167 (67%)
 Frame = +3

Query: 120 MKLVHRNLARNGPGSAKLLPEEEDDLWHAYNLIAVGDSLQAVTVRKVLRDSASGGRDAER 299
           MK   R + R+G G   L+ EE +D+WH YNLI +GD ++A T+RKV+ ++++G   ++R
Sbjct: 1   MKQFKRGIERDGTGFVVLMAEEAEDMWHIYNLIRIGDIIKASTIRKVVSETSTGTTSSQR 60

Query: 300 VKLKLEIVVESVDYDKEGNVLRVRGKNITENDHVKIGQFHTLELELKRPFVLRKEYWDWL 479
           V   L + VES+D+D     L ++G+NI END VK+G +HT++LE  R F L+K  WD +
Sbjct: 61  VHTMLTVSVESIDFDPGAQELHLKGRNIEENDIVKLGAYHTIDLEPNRKFTLQKTEWDSI 120

Query: 480 ALDTIQQACDPTASADLAVILMQEGLAHLFLIGRSITATRSRIETSI 620
            L+ +  A DP  +AD+A +++ EGLA++ LI  ++T TR++I+ +I
Sbjct: 121 DLERLNLALDPAQAADVAAVVLHEGLANVCLITPAMTLTRAKIDMTI 167



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>Y174_METJA (Q57638) Hypothetical protein MJ0174|
          Length = 347

 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 45/136 (33%), Positives = 75/136 (55%), Gaps = 2/136 (1%)
 Frame = +3

Query: 168 KLLPEEEDDLWHAYNLIAVGDSLQAVTVRKV--LRDSASGGRDAERVKLKLEIVVESVDY 341
           KL+PE  DDLW  YN+I  GD + AVT R+V    D     R A+R K+ L I V++V++
Sbjct: 14  KLMPENLDDLWVLYNIIEEGDKIFAVTERRVQDKGDVIRADRGAKR-KMFLGIEVKNVEF 72

Query: 342 DKEGNVLRVRGKNITENDHVKIGQFHTLELELKRPFVLRKEYWDWLALDTIQQACDPTAS 521
           D+    +R+ G  I   D V +G  HT+E++      + K +  W  ++ I++A + +  
Sbjct: 73  DENTKRVRILGTIIHGPDDVPLGSHHTIEIKPFDELSIEKNWKKW-QIERIKEAIESSKR 131

Query: 522 ADLAVILMQEGLAHLF 569
             + V++M +  A +F
Sbjct: 132 PKVLVVVMDDEEADIF 147



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>DOM34_YEAST (P33309) Protein DOM34|
          Length = 311

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
 Frame = +3

Query: 360 LRVRGKNITE-----NDHVKIGQFHTLELELKRPFVLRKEYWDWLALDTIQQACDPTASA 524
           L+ +G  +T+     N  + +G++ +  L+   PF + K+ ++      + +AC+    +
Sbjct: 6   LKYKGVTVTDESGASNVDIPVGKYLSFTLDYVYPFTIIKQNFNKFMQKLLNEACNIEYKS 65

Query: 525 DLAVILMQEGLAHLFLIGRSITATRSRIETSI 620
           D A +++QEG+AH+ L+  S T  + +IE S+
Sbjct: 66  DTAAVVLQEGIAHVCLVTSSSTILKQKIEYSM 97



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>ASNH1_METJA (Q58516) Putative asparagine synthetase [glutamine-hydrolyzing] 1|
           (EC 6.3.5.4)
          Length = 541

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
 Frame = +3

Query: 120 MKLVHRNLARNGPGSAKLLPEEEDDLWHAYNLIAVGDSLQAVTVRKVLRDSASGGRDAER 299
           + L H  LA  G    + +P E++ +W    L+  G+    + +R+ L+ +     D++ 
Sbjct: 62  LSLAHNRLAIVGRYGVQPIPNEDETIW----LVCNGEIYNYIELREYLKQNHEFRTDSDN 117

Query: 300 ---VKLKLEIVVESVD-------YDKEGNVLRV 368
              + L  E  +E +D       YDK  NV+R+
Sbjct: 118 EVIIHLYEEEKLEELDGDYAFAIYDKSKNVVRL 150



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>ILVC_RALSO (Q8XXN8) Ketol-acid reductoisomerase (EC 1.1.1.86)|
           (Acetohydroxy-acid isomeroreductase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 338

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
 Frame = +3

Query: 333 VDYDKEGNVLRVRGKNITENDHVKIGQFHTLELE---LKRPFVLRKEYWDW-LALDT--- 491
           V YDK+ ++  ++GKN+T   +   G  H L L    +K    LRK    W  A++    
Sbjct: 3   VFYDKDADLSLIKGKNVTIIGYGSQGHAHALNLNDSGVKVTVGLRKNGASWNKAVNAGLQ 62

Query: 492 IQQACDPTASADLAVILMQE 551
           +++  +    AD+ +IL+ +
Sbjct: 63  VKEVAEAVKDADVVMILLPD 82



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>GAG_MMTVC (P11284) Gag polyprotein [Contains: Protein p10; Phosphorylated|
           protein pp21; Protein p3; Protein p8; Protein n; Major
           core protein p27; Nucleic acid-binding protein p14]
          Length = 590

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = -2

Query: 574 IRNKWASPSCIRITARSALAVGSHACWMVSSANQSQYSFRRTKG 443
           + ++W +PS    TAR+ L+ G +  W      +S+ + ++T G
Sbjct: 316 VASQWLTPSDWHQTARATLSPGDYVLWRTEYEEKSKETVQKTAG 359



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>HIS7_ASHGO (Q75B47) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 220

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -3

Query: 456 VEQKVSSAQVLKYETGQSSRDHSQ*YFCHALAKHS 352
           V  + SS+QV+  +TG    DH      HALAKHS
Sbjct: 43  VAHQASSSQVINVQTGVGFLDH----MIHALAKHS 73



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>RPOC_PEDAC (P77917) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit) (Fragment)
          Length = 1055

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 18/81 (22%), Positives = 37/81 (45%)
 Frame = +3

Query: 312 LEIVVESVDYDKEGNVLRVRGKNITENDHVKIGQFHTLELELKRPFVLRKEYWDWLALDT 491
           ++ +++SVD +KE N+L+   K  +     +        L++   F+    + DW+ +D 
Sbjct: 175 IQALLQSVDLEKEANLLKEELKEASGQKRTRA----VRRLDIIEAFIKSGNHPDWMVMDA 230

Query: 492 IQQACDPTASADLAVILMQEG 554
           I     P    DL  ++  +G
Sbjct: 231 I-----PVMPPDLRPMVQLDG 246



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>ILVC_AZOSE (Q5NXP4) Ketol-acid reductoisomerase (EC 1.1.1.86)|
           (Acetohydroxy-acid isomeroreductase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 338

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
 Frame = +3

Query: 333 VDYDKEGNVLRVRGKNITENDHVKIGQFHTLELE---LKRPFVLRKEYWDWLALDT---- 491
           V YDK+ ++  ++GK IT   +   G  H   L+    K    LRK    W   +     
Sbjct: 3   VYYDKDADLSLIKGKQITIVGYGSQGHAHAQNLKDSGCKVTVGLRKSGASWKKAEAAGLD 62

Query: 492 IQQACDPTASADLAVILMQE 551
           +++  +  ++AD+ +IL+ +
Sbjct: 63  VREVAEAVSNADIVMILLPD 82



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>M860_ARATH (P92523) Hypothetical mitochondrial protein AtMg00860 (ORF158)|
          Length = 158

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 432 ELKRPFVLRKEYWDWLALDTIQQAC 506
           +LK PFV R   W+W    T +QAC
Sbjct: 126 DLKLPFVTRVGKWNWSCFITREQAC 150



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>ILVC_RALEJ (Q473V5) Ketol-acid reductoisomerase (EC 1.1.1.86)|
           (Acetohydroxy-acid isomeroreductase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 338

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
 Frame = +3

Query: 333 VDYDKEGNVLRVRGKNITENDHVKIGQFHTLELE---LKRPFVLRKEYWDW-LALDT--- 491
           V YDK+ ++  ++GKN+T   +   G  H L L+   +     LRK    W  A++    
Sbjct: 3   VFYDKDADLSLIKGKNVTIIGYGSQGHAHALNLKDSGVNVTVGLRKSGASWNKAVNAGLQ 62

Query: 492 IQQACDPTASADLAVILMQE 551
           +++  +    AD+ +IL+ +
Sbjct: 63  VKEVAEAVKGADVVMILLPD 82



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>ILVC_BURS3 (Q39ED2) Ketol-acid reductoisomerase (EC 1.1.1.86)|
           (Acetohydroxy-acid isomeroreductase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 338

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
 Frame = +3

Query: 330 SVDYDKEGNVLRVRGKNITENDHVKIGQFHTLELE---LKRPFVLRKEYWDWLALD---- 488
           +V YDK+ ++  ++GK +T   +   G  H L L+   +     LRK    W   +    
Sbjct: 2   NVFYDKDADLSLIKGKQVTIIGYGSQGHAHALNLKDSGVNVTVGLRKGGASWSKAENAGL 61

Query: 489 TIQQACDPTASADLAVILMQE 551
           ++++  +   SAD+ ++L+ +
Sbjct: 62  SVKEVAEAVKSADVVMMLLPD 82


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,245,497
Number of Sequences: 219361
Number of extensions: 1233618
Number of successful extensions: 3553
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3553
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5653129581
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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